Citrus Sinensis ID: 014936

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----
Protein Sequence
MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQRY
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccccEEEcccHHHHHHHHHHHHcccccEEEEcccccccHHHHHcccccEEEEEEccccccccccHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEccccccccccccHHHHHHHHHHHccEEEEccccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccHHHEEEEcHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHcccccEEEEEEccHHHcccccHHHHHccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHccEEEEEccccccEcccccccHEEEccccccEEEEEcccHHHHccccEEEEEcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEccccEccEEEEEEcHHHEcccccHHHHHHHHHHHHcEEcEEHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHEHHHccc
Coil and Loop (DISEMBL)
meisnggidntgsIITIKGMLSLLMQSVDDEKNEKKVISLamgdptvhscfhTTHVATEAVAEALLSEkfngyaptaglpLTRRAIAEYLSrdlpykltpndvfvtsGCTQAIDVAMALLsrpganillprpgfpiyELSAAFRHIEVRhfdllpdkgwevdlddiesladqNTVALVIInpgnpcgnvySYQHLQKLAETANKLKTLVIADEVyghlvfgdkpfvpmgvfgstvpiltlgslskrwivpgwrlgwfvttdpcgmfrkpkVVERMKKYFDILGDPATFIQAavpsilqqpdEVFFKKTLNLLKQSVDICYNkikeipciscphkpegsMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTfavdpyslEECLDRIKSFYQRHAKQLQRY
Flexible Loop (DISEMBL)
meisnggidntgsIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPgwrlgwfvttdpcgMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQRY
Low Complexity Region (SEG)
MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFhtthvateavaeallSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLddiiddidFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQRY
Disordered region (IsUnstruct)
**********TGSIITIKGMLSLLMQSV*******KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL******************GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ*********
Disordered Region (DISOPRED)
*************IITIKGMLSLLMQ*****KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFY**********
Disordered Region (DISEMBL)
MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQRY
Disordered Region (DISPRO)
****NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQRY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	415	2.2.26 [Sep-21-2011]
Q9FN30	414	Probable aminotransferase	yes	no	0.978	0.980	0.741	0.0
Q9LVY1	420	Tyrosine aminotransferase	no	no	0.954	0.942	0.551	1e-131
Q9ST02	461	Nicotianamine aminotransf	N/A	no	0.978	0.880	0.558	1e-131
Q9SIV0	462	S-alkyl-thiohydroximate l	no	no	0.980	0.880	0.519	1e-131
Q9ST03	551	Nicotianamine aminotransf	N/A	no	0.963	0.725	0.564	1e-130
Q67Y55	449	Probable aminotransferase	no	no	0.915	0.846	0.518	1e-117
Q9SK47	445	Probable aminotransferase	no	no	0.884	0.824	0.486	1e-108
Q8VYP2	424	Probable aminotransferase	no	no	0.862	0.844	0.480	1e-100
Q9SUR6	422	Cystine lyase CORI3 OS=Ar	no	no	0.884	0.869	0.468	6e-99
Q8QZR1	454	Tyrosine aminotransferase	yes	no	0.891	0.814	0.416	6e-81

>sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2 OS=Arabidopsis thaliana GN=At5g53970 PE=2 SV=1

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/410 (74%), Positives = 353/410 (86%), Gaps = 4/410 (0%)

Query: 3   ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNE--KKVISLAMGDPTVHSCFHTTHVATEA 60
           + NG    T S ITIKG+LSLLM+S+  E++E  K+VISL MGDPT++SCF TT V+ +A
Sbjct: 1   MENGA--TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQA 58

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V+++LLS KF+GY+PT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L
Sbjct: 59  VSDSLLSNKFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSML 118

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
           +RP ANILLPRPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +E+LAD+NTVALV+I
Sbjct: 119 ARPRANILLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVI 178

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           NPGNPCGNVYSYQHL K+AE+A KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTL
Sbjct: 179 NPGNPCGNVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTL 238

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP 300
           GSLSKRWIVPGWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQAAVP+IL+Q 
Sbjct: 239 GSLSKRWIVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAVPTILEQT 298

Query: 301 DEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFC 360
           DE FFKKTLN LK S DIC + IKEIPCI   H+PEGSMA+M+KLNLSLL+D+ DDIDFC
Sbjct: 299 DESFFKKTLNSLKNSSDICCDWIKEIPCIDSSHRPEGSMAMMVKLNLSLLEDVSDDIDFC 358

Query: 361 FKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           FKLA+EESVI+LPGTAVGLKNWLR+TFA D  S+EE   RIK FY RHAK
Sbjct: 359 FKLAREESVILLPGTAVGLKNWLRITFAADATSIEEAFKRIKCFYLRHAK 408

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: -

>sp|Q9LVY1|TAT_ARATH Tyrosine aminotransferase OS=Arabidopsis thaliana GN=TAT PE=2 SV=1

 Score =  468 bits (1204), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 219/397 (55%), Positives = 291/397 (73%), Gaps = 1/397 (0%)

Query: 15  ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA 74
           +TI+  L+ L+  +D   + + VI L  GDP+    F T   A EA+ +A+ S KFN Y+
Sbjct: 23  LTIRDYLNTLINCLDG-GDVRPVIPLGHGDPSPFPSFRTDQAAVEAICDAVRSTKFNNYS 81

Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
            ++G+P+ R+A+AEYLS DL Y+++PNDV +T+GC QAI++ ++ L+ PGANILLPRP +
Sbjct: 82  SSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQAIEILISALAIPGANILLPRPTY 141

Query: 135 PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
           P+Y+  AAF  +EVR+FDLLP+ GW+VDLD +E+LAD  TVA+++INP NPCGNV+S QH
Sbjct: 142 PMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADDKTVAILVINPCNPCGNVFSRQH 201

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254
           LQK+AETA KL  LVIADEVY H  FGDKPFV M  F   VP++ LG++SKRW VPGWRL
Sbjct: 202 LQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFAELVPVIVLGAISKRWFVPGWRL 261

Query: 255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314
           GW VT DP G+ +    V+ +    ++  DPATFIQ A+P I+    E FF   L ++K+
Sbjct: 262 GWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQGAMPDIIGNTKEEFFSSKLEMVKK 321

Query: 315 SVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG 374
             +ICY ++ +IPCI+CP KPEGSM  M+KLN SLL+DI DD+DFC KLAKEES+IILPG
Sbjct: 322 CAEICYEELMKIPCITCPCKPEGSMFTMVKLNFSLLEDISDDLDFCSKLAKEESMIILPG 381

Query: 375 TAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
            AVGLKNWLR+TFAV+   L E   R+K+F +RH+K 
Sbjct: 382 QAVGLKNWLRITFAVELELLIEGFSRLKNFTERHSKN 418

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using L-glutamate in vitro. Can convert phenylalanine to phenylpyruvate and catalyze the reverse reaction in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ST02|NAATA_HORVU Nicotianamine aminotransferase A OS=Hordeum vulgare GN=naat-A PE=1 SV=2

 Score =  467 bits (1201), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 228/408 (55%), Positives = 300/408 (73%), Gaps = 2/408 (0%)

Query: 5   NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEA 64
           +G +  TG+  +I+ +   +  SV+ E   + V+ LA GDP+V   F T   A +AVA A
Sbjct: 49  DGILATTGAKNSIRAIRYKISASVE-ESGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAA 107

Query: 65  LLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-P 123
           L + +FN YA   GLP  R A+AE+LS+ +PYKL+ +DVF+T+G TQAI+V + +L++  
Sbjct: 108 LRTGQFNCYAAGVGLPAARSAVAEHLSQGVPYKLSADDVFLTAGGTQAIEVIIPVLAQTA 167

Query: 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
           GANILLPRPG+P YE  AAF  +EVRHFDL+PDKGWE+D+D +ES+AD+NT A+VIINP 
Sbjct: 168 GANILLPRPGYPNYEARAAFNKLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPN 227

Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
           NPCG+VYSY HL K+AE A KL  LVIADEVYG LV G  PF+PMGVFG   P+L++GSL
Sbjct: 228 NPCGSVYSYDHLAKVAEVARKLGILVIADEVYGKLVLGSAPFIPMGVFGHIAPVLSIGSL 287

Query: 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
           SK WIVPGWRLGW    DP  +  K K+   +  Y ++  DPATF+Q A+P IL+     
Sbjct: 288 SKSWIVPGWRLGWVAVYDPTKILEKTKISTSITNYLNVSTDPATFVQEALPKILENTKAD 347

Query: 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL 363
           FFK+ + LLK+S +ICY +IKE   I+CPHKPEGSM VM+KLNL LL++I DDIDFC KL
Sbjct: 348 FFKRIIGLLKESSEICYREIKENKYITCPHKPEGSMFVMVKLNLHLLEEIHDDIDFCCKL 407

Query: 364 AKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
           AKEESVI+ PG+ +G++NW+R+TFA  P SL++ L+R+KSF QR+ K+
Sbjct: 408 AKEESVILCPGSVLGMENWVRITFACVPSSLQDGLERVKSFCQRNKKK 455

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9SIV0|SUR1_ARATH S-alkyl-thiohydroximate lyase SUR1 OS=Arabidopsis thaliana GN=SUR1 PE=1 SV=1

 Score =  467 bits (1201), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 213/410 (51%), Positives = 298/410 (72%), Gaps = 3/410 (0%)

Query: 6   GGIDNTG--SIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAE 63
           GG D     S +T++G++ +L  +   + N K ++ L  GDP+V+ CF T   A +AV +
Sbjct: 36  GGSDKAAKASTVTLRGVIYMLFDNCGKDVN-KTILPLGHGDPSVYPCFRTCIEAEDAVVD 94

Query: 64  ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
            L S K N Y P AG+   RRA+A+Y++RDLP+KLTP D+F+T+GC Q I++    L+RP
Sbjct: 95  VLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARP 154

Query: 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
            ANILLPRPGFP Y+  AA+  +EVR FDLLP+K WE+DL+ IE++AD+NTVA+V+INP 
Sbjct: 155 NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPN 214

Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
           NPCGNVYS+ HL+K+AETA KL  +VI+DEVY   +FGD PFV MG F S VP+LTL  +
Sbjct: 215 NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGI 274

Query: 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
           SK W+VPGW++GW    DP G+F   KV++ +K+  D+  DPAT IQAA+P+IL++ D+ 
Sbjct: 275 SKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKN 334

Query: 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL 363
           FF K   +LK +VD+  +++K+IPC+ CP KPE    ++ KL LSL+D+I DDIDFC KL
Sbjct: 335 FFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKL 394

Query: 364 AKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQ 413
           A+EE+++ LPG A+GLKNW+R+T  V+ + LE+ L+R+K F  RHAK+ +
Sbjct: 395 AREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKKTE 444

C-S lyase involved in glucosinolate biosynthesis. Converts S-(alkylacetohydroximoyl)-L-cysteine to thiohydroximate. Functions in auxin homeostasis. Probably required for glucosinolate activation in response to pathogens.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ST03|NAATB_HORVU Nicotianamine aminotransferase B OS=Hordeum vulgare GN=naat-B PE=1 SV=2

 Score =  464 bits (1194), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 227/402 (56%), Positives = 296/402 (73%), Gaps = 2/402 (0%)

Query: 11  TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF 70
           TG+ ++I+ +   +  SV  EK  + V+ LA GDP+V   F T   A +AVA A+ + +F
Sbjct: 145 TGANMSIRAIRYKISASVQ-EKGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAAVRTGQF 203

Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-PGANILL 129
           N Y    GLP  R A+AE+LS+ +PY L+ +DVF+T+G TQAI+V + +L++  GANILL
Sbjct: 204 NCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVIIPVLAQTAGANILL 263

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           PRPG+P YE  AAF  +EVRHFDL+PDKGWE+D+D +ES+AD+NT A+VIINP NPCG+V
Sbjct: 264 PRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPNNPCGSV 323

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSY HL K+AE A +L  LVIADEVYG LV G  PF+PMGVFG   P+L++GSLSK WIV
Sbjct: 324 YSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITPVLSIGSLSKSWIV 383

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTL 309
           PGWRLGW    DP  + ++ K+   +  Y ++  DPATFIQAA+P IL+   E FFK  +
Sbjct: 384 PGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAALPQILENTKEDFFKAII 443

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
            LLK+S +ICY +IKE   I+CPHKPEGSM VM+KLNL LL++I DDIDFC KLAKEESV
Sbjct: 444 GLLKESSEICYKQIKENKYITCPHKPEGSMFVMVKLNLHLLEEIDDDIDFCCKLAKEESV 503

Query: 370 IILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
           I+ PG+ +G+ NW+R+TFA  P SL++ L RIKSF QR+ K+
Sbjct: 504 ILCPGSVLGMANWVRITFACVPSSLQDGLGRIKSFCQRNKKR 545

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q67Y55|TAT1_ARATH Probable aminotransferase TAT1 OS=Arabidopsis thaliana GN=At4g28420 PE=2 SV=1

 Score =  423 bits (1087), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 197/380 (51%), Positives = 273/380 (71%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           +K ++ LA GDP+V+ C+ T+ +   AV + L S K N Y P AG+   R+A+A+Y++RD
Sbjct: 59  KKPLLPLAHGDPSVYPCYRTSILVENAVVDVLRSGKGNSYGPAAGILPARQAVADYVNRD 118

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
           L  K+ PNDVF+T GC Q I+V +  L+RP ANILLPRP +P YE  A +  +EVR FDL
Sbjct: 119 LTNKVKPNDVFITVGCNQGIEVVLQSLARPNANILLPRPSYPHYEARAVYSGLEVRKFDL 178

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DL  IE++AD+NTVA+VIINP NPCGNVYSY HL+K+AETA KL  +VI DE
Sbjct: 179 LPEKEWEIDLPGIEAMADENTVAMVIINPNNPCGNVYSYDHLKKVAETAKKLGIMVITDE 238

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           VY   +FGDKPFVPMG F S  P++TLG +SK WIVPGWR+GW    DP G+ +   +V+
Sbjct: 239 VYCQTIFGDKPFVPMGEFSSITPVITLGGISKGWIVPGWRIGWIALNDPRGILKSTGMVQ 298

Query: 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333
            +++  DI  D  T +QAA+P IL + ++  F K  ++LKQ+V++  +++KEIPC+ C  
Sbjct: 299 SIQQNLDITPDATTIVQAALPEILGKANKELFAKKNSMLKQNVELVCDRLKEIPCLVCNK 358

Query: 334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS 393
           KPE    ++ KL L LL+DI DD+DFC KLAKEE++++LPG A+GLKNW+R+T  V+   
Sbjct: 359 KPESCTYLLTKLKLPLLEDIEDDMDFCMKLAKEENLVLLPGVALGLKNWIRITIGVEAQM 418

Query: 394 LEECLDRIKSFYQRHAKQLQ 413
           LE+ L+R+  F +RH K+ +
Sbjct: 419 LEDALERLNGFCKRHLKKTE 438

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SK47|TAT3_ARATH Probable aminotransferase TAT3 OS=Arabidopsis thaliana GN=TAT3 PE=2 SV=1

 Score =  392 bits (1007), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 179/368 (48%), Positives = 259/368 (70%), Gaps = 1/368 (0%)

Query: 43  GDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND 102
           G+P+ HS F T   A EAVA A  S   N YAP+ G+   RRA+AEYL+ +LP KL   D
Sbjct: 57  GEPSAHSNFRTCPEAEEAVAAAARSGMANSYAPSPGVFKARRAVAEYLNGELPTKLKAED 116

Query: 103 VFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161
           V++T GC QAI++ + +L   P ANILLPRPG+P Y+  A +  +E+R +DLLP+  WE+
Sbjct: 117 VYITGGCNQAIEIVIDSLAGNPSANILLPRPGYPHYDARAVYSGLEIRKYDLLPESDWEI 176

Query: 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221
           +LD +E+ AD+NTVA+VIINP NPCGNVY+Y HL K+AE A KL  ++I+DEVY H+V+G
Sbjct: 177 NLDGLEAAADENTVAMVIINPNNPCGNVYTYDHLNKVAEMARKLGIMIISDEVYDHVVYG 236

Query: 222 DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI 281
           DKPF+PMG F S  P++TLGS+SK W+ PGWR+GW    DP G+F    VV+ ++ + D+
Sbjct: 237 DKPFIPMGKFASIAPVITLGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQAIEDFLDL 296

Query: 282 LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV 341
              P+  +Q A+P IL++  + FF+K +  ++++V++   ++K+IPC+ CP KPE    +
Sbjct: 297 TPQPSFILQEALPDILEKTPKEFFEKKIKAMRRNVELSCERLKDIPCLFCPKKPESCSYL 356

Query: 342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRI 401
            LKL+ S+L++I +D DFC KL  EES+I++PG A+G +NW+R++   D   ++E  DR+
Sbjct: 357 WLKLDTSMLNNIKNDFDFCTKLVSEESLILIPGVALGAENWVRISIGTDESVVQEIFDRL 416

Query: 402 KSFYQRHA 409
           K FY RHA
Sbjct: 417 KGFYDRHA 424

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VYP2|TAT4_ARATH Probable aminotransferase TAT4 OS=Arabidopsis thaliana GN=At4g23590 PE=2 SV=1

 Score =  366 bits (940), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 172/358 (48%), Positives = 248/358 (69%)

Query: 52  HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111
            T+H A +AV +A+L    N YAP+ GLP+ +RA+AEYL+RDL  KLT +DV++T GC Q
Sbjct: 52  ETSHTAEKAVVKAVLCGTGNAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQ 111

Query: 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171
           AI++A+++L++P ANILLPRPGFP   + + ++H+EVR ++ +P++ +E+D + +  + D
Sbjct: 112 AIELAVSILAKPKANILLPRPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVD 171

Query: 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231
           +NT A+ IINP NP GN Y+  HL++LA  A +L  +V++DEVY   VFG  PFVPMG F
Sbjct: 172 ENTFAIFIINPHNPNGNYYTEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKF 231

Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQA 291
            S VP++TLGS+SK WIVPGWR GW    D  G+FR  KV++  K++ +I   P T IQA
Sbjct: 232 SSIVPVITLGSISKGWIVPGWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQA 291

Query: 292 AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351
           A+P+IL++  + FF+K    LK  VD  Y+K+K IP ++C  KPE    +  KL+     
Sbjct: 292 AIPTILEKTPQDFFEKRGIFLKDKVDFGYSKLKNIPTLTCYMKPESCTFLWTKLDPLHFV 351

Query: 352 DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409
           DI DD DFC KLAKEE++++LPG A G  NWLR +  ++   LE+  +R+KSF +RH+
Sbjct: 352 DIEDDHDFCRKLAKEENLVVLPGIAFGQNNWLRHSIDMETPRLEDAFERLKSFCERHS 409

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SUR6|CORI3_ARATH Cystine lyase CORI3 OS=Arabidopsis thaliana GN=CORI3 PE=1 SV=1

 Score =  361 bits (926), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 172/367 (46%), Positives = 249/367 (67%)

Query: 45  PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF 104
           P  +    T++ A +AV +A+L    N YAP+ GL   + A+AEYL++ LP KLT +DVF
Sbjct: 45  PPRNEILETSNTAEKAVVKAVLYGSGNAYAPSLGLAAAKSAVAEYLNQGLPKKLTADDVF 104

Query: 105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLD 164
           +T GC QAI++A+ +L++P AN+LLP PGFP   + + ++++EVRH++ LP+K +E+D D
Sbjct: 105 MTLGCKQAIELAVDILAKPKANVLLPSPGFPWDLVRSIYKNLEVRHYNFLPEKNFEIDFD 164

Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
            + +L D+NT A+ IINP NP GN YS  HL++LAE A +LK +V++DEV+   +FG  P
Sbjct: 165 SVRALVDENTFAIFIINPHNPNGNTYSEAHLKQLAELAKELKIMVVSDEVFRWTLFGSNP 224

Query: 225 FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGD 284
           FVPMG F S VP++TLGS+SK W VPGWR GW    D  G+FR  KV++  + +  I  +
Sbjct: 225 FVPMGKFSSIVPVVTLGSISKGWKVPGWRTGWLTLHDLDGVFRNTKVLQAAQDFLQINNN 284

Query: 285 PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK 344
           P T IQAA+P IL++  + FF K  + LK  V+  Y+K+K IP ++C  KPE    +  +
Sbjct: 285 PPTVIQAAIPDILEKTPQEFFDKRQSFLKDKVEFGYSKLKYIPSLTCYMKPEACTFLWTE 344

Query: 345 LNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404
           L+LS   DI DD DFC KLAKEE++++LPG A   KNWLR +  ++   LE+ L+R+KSF
Sbjct: 345 LDLSSFVDIEDDQDFCNKLAKEENLVVLPGIAFSQKNWLRHSIDMETPVLEDALERLKSF 404

Query: 405 YQRHAKQ 411
             RH+ +
Sbjct: 405 CDRHSNK 411

Possesses cystine lyase and tyrosine aminotransferase activities in vitro. May be required for the synthesis of homogentisate a precursor of tocopherols and plastoquinones.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8QZR1|ATTY_MOUSE Tyrosine aminotransferase OS=Mus musculus GN=Tat PE=1 SV=1

 Score =  301 bits (771), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 156/375 (41%), Positives = 228/375 (60%), Gaps = 5/375 (1%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
           K VISL++GDPTV     T    T+A+ +AL S K+NGYAP+ G   +R  +A Y    +
Sbjct: 71  KTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPE 130

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
            P  L   DV +TSGC+QAI++ +A+L+ PG NIL+PRPGF +Y   A    IEV+ ++L
Sbjct: 131 AP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNL 188

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DL  +ESL D+ T  LV+ NP NPCG+V+S +HLQK+   A +    ++ADE
Sbjct: 189 LPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADE 248

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           +YG +VF D  + PM    + VPIL+ G L+KRW+VPGWRLGW +  D   +F       
Sbjct: 249 IYGDMVFSDCKYEPMATLSTNVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 308

Query: 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333
            +K    ILG P T +Q A+ SILQ+  + F++ TL+ LK + D+CY  +  IP +  P 
Sbjct: 309 LVKLSQRILG-PCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQ-PV 366

Query: 334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS 393
           +P G+M +M+ + +    +  +D++F  +L  E+SV  LP T     N+ RV   V    
Sbjct: 367 RPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATCFEYPNFFRVVITVPEVM 426

Query: 394 LEECLDRIKSFYQRH 408
           + E   RI+ F ++H
Sbjct: 427 MLEACSRIQEFCEQH 441

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using glutamic acid, with 2-oxoglutarate as cosubstrate (in vitro). Has no transaminase activity towards phenylalanine.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	415
224117120	417	aminotransferase family protein [Populus	0.990	0.985	0.805	0.0
449456617	412	PREDICTED: probable aminotransferase TAT	0.978	0.985	0.772	0.0
288310300	412	aromatic amino acid transaminase [Cucumi	0.968	0.975	0.761	0.0
290760242	414	aminotransferase family protein [Bruguie	0.961	0.963	0.753	0.0
147840272	422	hypothetical protein VITISV_030611 [Viti	0.963	0.947	0.750	0.0
225461534	422	PREDICTED: probable aminotransferase TAT	0.963	0.947	0.750	0.0
302142963	450	unnamed protein product [Vitis vinifera]	0.963	0.888	0.750	0.0
297792821	411	hypothetical protein ARALYDRAFT_918507 [	0.963	0.973	0.75	0.0
15239521	414	tyrosine aminotransferase [Arabidopsis t	0.978	0.980	0.741	0.0
23397279	414	putatative tyrosine aminotransferase [Ar	0.978	0.980	0.739	0.0

>gi|224117120|ref|XP_002317481.1| aminotransferase family protein [Populus trichocarpa] gi|222860546|gb|EEE98093.1| aminotransferase family protein [Populus trichocarpa]

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/411 (80%), Positives = 370/411 (90%)

Query: 5   NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEA 64
           NG   +T   ITIKG+LSLLM+S+D+  + + VISL MGDPT HSCFHTTHVA EAV +A
Sbjct: 7   NGYEMDTPKNITIKGILSLLMESIDNNNHSRSVISLGMGDPTAHSCFHTTHVAQEAVVDA 66

Query: 65  LLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG 124
           L S+KFNGYAPT GLP TRRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+A+L+RPG
Sbjct: 67  LQSDKFNGYAPTVGLPQTRRAIAEYLSRDLPYKLSSDDVFITSGCTQAIDVALAMLARPG 126

Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
           ANILLPRPGFPIYEL AAFRH+EVRHFDLLP+KGWEVDLD +E+LADQNTVALVIINPGN
Sbjct: 127 ANILLPRPGFPIYELCAAFRHLEVRHFDLLPEKGWEVDLDAVEALADQNTVALVIINPGN 186

Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
           PCGNVYSYQHL+K+AETA KLKTLVIADEVYGHL FG  PFVPMGVFGS VP+LTLGSLS
Sbjct: 187 PCGNVYSYQHLKKIAETAEKLKTLVIADEVYGHLAFGRNPFVPMGVFGSIVPVLTLGSLS 246

Query: 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVF 304
           KRWIVPGWRLGWFVT+DP GMFR PKVVER+KKYFDILG PATFIQAAVP IL+  DEVF
Sbjct: 247 KRWIVPGWRLGWFVTSDPSGMFRNPKVVERIKKYFDILGGPATFIQAAVPGILELTDEVF 306

Query: 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLA 364
           FK+T+N+LKQS DIC ++IKEIPCISCP+KPEGSMA+M+KLNLSLL+DI DDIDFCFKLA
Sbjct: 307 FKRTINILKQSSDICCDRIKEIPCISCPYKPEGSMALMMKLNLSLLEDISDDIDFCFKLA 366

Query: 365 KEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQRY 415
           +EE VIILPGTAVGLKNWLR+TFAVDP SLEE L R+KSF  RH+KQ +RY
Sbjct: 367 REEFVIILPGTAVGLKNWLRITFAVDPVSLEEALGRVKSFCLRHSKQFERY 417

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456617|ref|XP_004146045.1| PREDICTED: probable aminotransferase TAT2-like [Cucumis sativus] gi|449520475|ref|XP_004167259.1| PREDICTED: probable aminotransferase TAT2-like [Cucumis sativus]

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/408 (77%), Positives = 364/408 (89%), Gaps = 2/408 (0%)

Query: 1   MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEA 60
           +E  N  +D T S ITIKG+LSLL+Q+ D E N +++ISL MGDP+ +SCFHTT +A +A
Sbjct: 3   IEAVNSKVD-TASTITIKGILSLLVQNAD-ENNGRRLISLGMGDPSAYSCFHTTRIAQDA 60

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V ++L SEKFNGYAPTAGLP TRRAIAEYLSRDLPYKLT +DVF+TSGCTQAIDVA+A+L
Sbjct: 61  VVDSLESEKFNGYAPTAGLPQTRRAIAEYLSRDLPYKLTSDDVFITSGCTQAIDVALAML 120

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
           +RPGANILLPRPGFPIYEL +AFR++EVRHF+LLP +GWEVDLD IE+LAD+NTVALVII
Sbjct: 121 ARPGANILLPRPGFPIYELCSAFRNLEVRHFNLLPQQGWEVDLDAIETLADKNTVALVII 180

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           NPGNPCGNVYSYQHL+K+AETA KL  LVIADEVYGHL FG +PFVPMGVFGSTVP+LTL
Sbjct: 181 NPGNPCGNVYSYQHLKKIAETAEKLGILVIADEVYGHLAFGSRPFVPMGVFGSTVPVLTL 240

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP 300
           GSLSKRWIVPGWRLGWFVT+DP G FRKPKV+ER+KKYFDILG PATFIQAAVP IL+  
Sbjct: 241 GSLSKRWIVPGWRLGWFVTSDPSGTFRKPKVIERIKKYFDILGGPATFIQAAVPHILEST 300

Query: 301 DEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFC 360
           DEVFFKKT+N+LKQ+ +IC  KIKEIPCI+C H+PEGSMA+M++LN+ LL+DI DDIDFC
Sbjct: 301 DEVFFKKTINILKQTSEICCRKIKEIPCITCTHRPEGSMAMMVRLNIDLLEDISDDIDFC 360

Query: 361 FKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRH 408
           FKLAKEES++ILPGTAVGLKNWLR+TFAVDP  LEE L R+KSF QRH
Sbjct: 361 FKLAKEESLVILPGTAVGLKNWLRITFAVDPSFLEEALGRLKSFCQRH 408

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|288310300|gb|ADC45389.1| aromatic amino acid transaminase [Cucumis melo]

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/403 (76%), Positives = 358/403 (88%), Gaps = 1/403 (0%)

Query: 10  NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK 69
           +T S I+IKG+LSLL+Q+ D E N +++ISL MGDP+ +SCFHTT +A +AV + L SEK
Sbjct: 11  DTASTISIKGILSLLVQNAD-ENNGRRLISLGMGDPSAYSCFHTTRIAQDAVVDCLESEK 69

Query: 70  FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129
           FNGYAPT GLP +RRAIAEYLSRDLPYKLT +DVF+TSGCTQAIDVA+A+L+RPGANILL
Sbjct: 70  FNGYAPTVGLPQSRRAIAEYLSRDLPYKLTSDDVFITSGCTQAIDVALAMLARPGANILL 129

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           PRPGFPIYEL ++F+++EVRHF+LLP +GWEVDL  IE+LAD+NTVALVIINPGNPCGNV
Sbjct: 130 PRPGFPIYELCSSFQNLEVRHFNLLPQQGWEVDLHAIETLADKNTVALVIINPGNPCGNV 189

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSYQHL+K+AETA KL  LVIADEVYGHL FG +PFVPMGVFGSTVP+LTLGSLSKRWIV
Sbjct: 190 YSYQHLKKIAETAEKLGILVIADEVYGHLAFGSRPFVPMGVFGSTVPVLTLGSLSKRWIV 249

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTL 309
           PGWRLGWFVT+DP GMFRKPKV+ER+KKYFD LG PATFIQAAVP IL+  DEVFFKKT+
Sbjct: 250 PGWRLGWFVTSDPSGMFRKPKVIERIKKYFDTLGGPATFIQAAVPRILESTDEVFFKKTI 309

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
           N+LKQ+ +IC  KIKEIPCI+C H+PEGSMA+M++LN+ LL+DI DDIDFCFKLAKEES+
Sbjct: 310 NILKQTSEICCRKIKEIPCITCTHRPEGSMAMMVRLNIDLLEDISDDIDFCFKLAKEESL 369

Query: 370 IILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL 412
           +ILPGTAVGLKNWLR+TFAVDP  LEE L R+KSF QRH   L
Sbjct: 370 VILPGTAVGLKNWLRITFAVDPSFLEEALGRLKSFCQRHTLML 412

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|290760242|gb|ADD54646.1| aminotransferase family protein [Bruguiera gymnorhiza]

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/402 (75%), Positives = 352/402 (87%), Gaps = 3/402 (0%)

Query: 10  NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK 69
            T + ITIKG+LSLLMQS+D E+  + VISL MGDP+ +SCFHTT VA EAV +AL  +K
Sbjct: 12  ETSNTITIKGILSLLMQSID-ERVGRSVISLGMGDPSAYSCFHTTPVAQEAVVDALQCDK 70

Query: 70  FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129
           FNGY+PT GLP TRRA+AE+LSRDLPYKL+ +DVF+T GCTQ+IDVA+A+L+ PGANILL
Sbjct: 71  FNGYSPTVGLPQTRRAVAEFLSRDLPYKLSADDVFITCGCTQSIDVAVAMLAHPGANILL 130

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           PRPGFPIYELSA+FRH+EVRHFDLLP+KGWEVDL+ +E+LAD+NTVALVIINPGNPCGNV
Sbjct: 131 PRPGFPIYELSASFRHLEVRHFDLLPEKGWEVDLNAVEALADENTVALVIINPGNPCGNV 190

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSYQHL+++AETA KLK LVIADEVYGHL FG  PF+PMGVFGS VP+LTLGSLSKRWIV
Sbjct: 191 YSYQHLKRIAETAEKLKILVIADEVYGHLAFGHNPFIPMGVFGSIVPVLTLGSLSKRWIV 250

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTL 309
           PGWRLGWFV +DP G FRKPK VER+KKYFD+LG PATFIQAA+P I+++ DE FFKKT+
Sbjct: 251 PGWRLGWFVISDPVGTFRKPKTVERIKKYFDLLGGPATFIQAALPRIIEETDEEFFKKTI 310

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
             LKQ+ DICY+KI+EI CI+CPHKPEGSMAVM  LNL LL+DI DD DFCFKLAKEESV
Sbjct: 311 RTLKQASDICYDKIREISCITCPHKPEGSMAVM--LNLELLEDICDDSDFCFKLAKEESV 368

Query: 370 IILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
           I+LPGTAVGLKNW+RVTFA DP  LEE L+R+K F QRHA +
Sbjct: 369 IVLPGTAVGLKNWIRVTFAADPALLEEALERVKIFCQRHASR 410

Source: Bruguiera gymnorhiza

Species: Bruguiera gymnorhiza

Genus: Bruguiera

Family: Rhizophoraceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147840272|emb|CAN72828.1| hypothetical protein VITISV_030611 [Vitis vinifera]

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/401 (75%), Positives = 353/401 (88%), Gaps = 1/401 (0%)

Query: 10  NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK 69
           +T + ITIKG++SLLM ++D E N K++ISL MGDP+V++CFHT+HVATE+V +A+ S K
Sbjct: 18  DTTTTITIKGLISLLMANID-EGNNKRLISLGMGDPSVYTCFHTSHVATESVVDAVESNK 76

Query: 70  FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129
           +NGYAPT+GLP  R+AIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L+RPGANIL+
Sbjct: 77  YNGYAPTSGLPQARKAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSILARPGANILI 136

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           P PGFPIY+LSA+FR +EVR++DLLP+KGWE DLD I++LADQNTVALVIINP NPCG+V
Sbjct: 137 PNPGFPIYQLSASFRGLEVRYYDLLPEKGWEADLDAIKALADQNTVALVIINPNNPCGSV 196

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSYQHL+K AETA KL   VIADEVYGHL FG  PFVPMGVFGS VP+LTLGSLSKRWIV
Sbjct: 197 YSYQHLKKTAETARKLSIPVIADEVYGHLAFGGNPFVPMGVFGSIVPVLTLGSLSKRWIV 256

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTL 309
           PGWRLGWFV TDP  +F  PK+VER+KKYFDILG PATFIQAAVP I++Q D  FFKKT+
Sbjct: 257 PGWRLGWFVITDPSCLFITPKIVERLKKYFDILGGPATFIQAAVPRIMEQTDGTFFKKTI 316

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
           N+LKQ+ DIC  KI+EIPCI+CPHKPEGSMAVM+KLNLSLL+DI DDIDFCFKLAKEESV
Sbjct: 317 NILKQASDICLEKIQEIPCITCPHKPEGSMAVMVKLNLSLLEDINDDIDFCFKLAKEESV 376

Query: 370 IILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           IILPG AVGLKNWLR+TFA DP  LEE L+RIKSFY RH+ 
Sbjct: 377 IILPGVAVGLKNWLRITFAADPSFLEEGLERIKSFYHRHSN 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461534|ref|XP_002282664.1| PREDICTED: probable aminotransferase TAT2 isoform 1 [Vitis vinifera]

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/401 (75%), Positives = 353/401 (88%), Gaps = 1/401 (0%)

Query: 10  NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK 69
           +T + ITIKG++SLLM ++D E N K++ISL MGDP+V++CFHT+HVATE+V +A+ S K
Sbjct: 18  DTTTTITIKGLISLLMANID-EGNNKRLISLGMGDPSVYTCFHTSHVATESVVDAVESNK 76

Query: 70  FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129
           +NGYAPT+GLP  R+AIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L+RPGANIL+
Sbjct: 77  YNGYAPTSGLPQARKAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSILARPGANILI 136

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           P PGFPIY+LSA+FR +EVR++DLLP+KGWE DLD I++LADQNTVALVIINP NPCG+V
Sbjct: 137 PNPGFPIYQLSASFRGLEVRYYDLLPEKGWEADLDAIKALADQNTVALVIINPNNPCGSV 196

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSYQHL+K AETA KL   VIADEVYGHL FG  PFVPMGVFGS VP+LTLGSLSKRWIV
Sbjct: 197 YSYQHLKKTAETARKLSIPVIADEVYGHLAFGGNPFVPMGVFGSIVPVLTLGSLSKRWIV 256

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTL 309
           PGWRLGWFV TDP  +F  PK+VER+KKYFDILG PATFIQAAVP I++Q D  FFKKT+
Sbjct: 257 PGWRLGWFVITDPSCLFITPKIVERLKKYFDILGGPATFIQAAVPRIMEQTDGTFFKKTI 316

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
           N+LKQ+ DIC  KI+EIPCI+CPHKPEGSMAVM+KLNLSLL+DI DDIDFCFKLAKEESV
Sbjct: 317 NILKQASDICLEKIQEIPCITCPHKPEGSMAVMVKLNLSLLEDINDDIDFCFKLAKEESV 376

Query: 370 IILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           IILPG AVGLKNWLR+TFA DP  LEE L+RIKSFY RH+ 
Sbjct: 377 IILPGVAVGLKNWLRITFAADPSFLEEGLERIKSFYHRHSN 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142963|emb|CBI20258.3| unnamed protein product [Vitis vinifera]

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/401 (75%), Positives = 353/401 (88%), Gaps = 1/401 (0%)

Query: 10  NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK 69
           +T + ITIKG++SLLM ++D E N K++ISL MGDP+V++CFHT+HVATE+V +A+ S K
Sbjct: 46  DTTTTITIKGLISLLMANID-EGNNKRLISLGMGDPSVYTCFHTSHVATESVVDAVESNK 104

Query: 70  FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129
           +NGYAPT+GLP  R+AIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L+RPGANIL+
Sbjct: 105 YNGYAPTSGLPQARKAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSILARPGANILI 164

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           P PGFPIY+LSA+FR +EVR++DLLP+KGWE DLD I++LADQNTVALVIINP NPCG+V
Sbjct: 165 PNPGFPIYQLSASFRGLEVRYYDLLPEKGWEADLDAIKALADQNTVALVIINPNNPCGSV 224

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSYQHL+K AETA KL   VIADEVYGHL FG  PFVPMGVFGS VP+LTLGSLSKRWIV
Sbjct: 225 YSYQHLKKTAETARKLSIPVIADEVYGHLAFGGNPFVPMGVFGSIVPVLTLGSLSKRWIV 284

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTL 309
           PGWRLGWFV TDP  +F  PK+VER+KKYFDILG PATFIQAAVP I++Q D  FFKKT+
Sbjct: 285 PGWRLGWFVITDPSCLFITPKIVERLKKYFDILGGPATFIQAAVPRIMEQTDGTFFKKTI 344

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
           N+LKQ+ DIC  KI+EIPCI+CPHKPEGSMAVM+KLNLSLL+DI DDIDFCFKLAKEESV
Sbjct: 345 NILKQASDICLEKIQEIPCITCPHKPEGSMAVMVKLNLSLLEDINDDIDFCFKLAKEESV 404

Query: 370 IILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           IILPG AVGLKNWLR+TFA DP  LEE L+RIKSFY RH+ 
Sbjct: 405 IILPGVAVGLKNWLRITFAADPSFLEEGLERIKSFYHRHSN 445

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792821|ref|XP_002864295.1| hypothetical protein ARALYDRAFT_918507 [Arabidopsis lyrata subsp. lyrata] gi|297310130|gb|EFH40554.1| hypothetical protein ARALYDRAFT_918507 [Arabidopsis lyrata subsp. lyrata]

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/400 (75%), Positives = 349/400 (87%)

Query: 11  TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF 70
           T S ITIKG+LSLLM+S+ +++  K+V+SL MGDPT++SCF TT V+ +AV+++LLS KF
Sbjct: 6   TTSTITIKGILSLLMESISEDEEGKRVVSLGMGDPTLYSCFRTTQVSLQAVSDSLLSNKF 65

Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
           +GY+PT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L+RP ANILLP
Sbjct: 66  HGYSPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPRANILLP 125

Query: 131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190
           RPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +ESLAD+NTVALV+INPGNPCGNVY
Sbjct: 126 RPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVESLADENTVALVVINPGNPCGNVY 185

Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250
           SYQHL K+AETA KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTLGSLSKRWIVP
Sbjct: 186 SYQHLMKIAETAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTLGSLSKRWIVP 245

Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLN 310
           GWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQAAVP+IL+Q DE FFKKTLN
Sbjct: 246 GWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAVPTILEQTDESFFKKTLN 305

Query: 311 LLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVI 370
            LK S DIC + IKEIPCI   H+PEGSMA+M+KLNLS+L+D+ DDIDFCFKLA+EESVI
Sbjct: 306 SLKNSSDICCDWIKEIPCIDSTHRPEGSMAMMVKLNLSILEDVSDDIDFCFKLAREESVI 365

Query: 371 ILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           +LPGTAVGLKNWLR+TFA D  S+EE   RIK FY RHAK
Sbjct: 366 LLPGTAVGLKNWLRITFAADAPSIEEAFKRIKCFYLRHAK 405

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239521|ref|NP_200208.1| tyrosine aminotransferase [Arabidopsis thaliana] gi|75171781|sp|Q9FN30.1|TAT2_ARATH RecName: Full=Probable aminotransferase TAT2; AltName: Full=Tyrosine aminotransferase 2 gi|10177259|dbj|BAB10727.1| tyrosine aminotransferase [Arabidopsis thaliana] gi|25054842|gb|AAN71911.1| putative tyrosine aminotransferase [Arabidopsis thaliana] gi|332009051|gb|AED96434.1| tyrosine aminotransferase [Arabidopsis thaliana]

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/410 (74%), Positives = 353/410 (86%), Gaps = 4/410 (0%)

Query: 3   ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNE--KKVISLAMGDPTVHSCFHTTHVATEA 60
           + NG    T S ITIKG+LSLLM+S+  E++E  K+VISL MGDPT++SCF TT V+ +A
Sbjct: 1   MENGA--TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQA 58

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V+++LLS KF+GY+PT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L
Sbjct: 59  VSDSLLSNKFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSML 118

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
           +RP ANILLPRPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +E+LAD+NTVALV+I
Sbjct: 119 ARPRANILLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVI 178

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           NPGNPCGNVYSYQHL K+AE+A KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTL
Sbjct: 179 NPGNPCGNVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTL 238

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP 300
           GSLSKRWIVPGWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQAAVP+IL+Q 
Sbjct: 239 GSLSKRWIVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAVPTILEQT 298

Query: 301 DEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFC 360
           DE FFKKTLN LK S DIC + IKEIPCI   H+PEGSMA+M+KLNLSLL+D+ DDIDFC
Sbjct: 299 DESFFKKTLNSLKNSSDICCDWIKEIPCIDSSHRPEGSMAMMVKLNLSLLEDVSDDIDFC 358

Query: 361 FKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           FKLA+EESVI+LPGTAVGLKNWLR+TFA D  S+EE   RIK FY RHAK
Sbjct: 359 FKLAREESVILLPGTAVGLKNWLRITFAADATSIEEAFKRIKCFYLRHAK 408

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|23397279|gb|AAN31921.1| putatative tyrosine aminotransferase [Arabidopsis thaliana]

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/410 (73%), Positives = 352/410 (85%), Gaps = 4/410 (0%)

Query: 3   ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNE--KKVISLAMGDPTVHSCFHTTHVATEA 60
           + NG    T S ITIKG+LSLLM+S+  E++E  K+VISL MGDPT++SCF TT V+ +A
Sbjct: 1   MENGA--TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQA 58

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V+++LLS KF+GY+ T GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L
Sbjct: 59  VSDSLLSNKFHGYSHTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSML 118

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
           +RP ANILLPRPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +E+LAD+NTVALV+I
Sbjct: 119 ARPRANILLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVI 178

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           NPGNPCGNVYSYQHL K+AE+A KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTL
Sbjct: 179 NPGNPCGNVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTL 238

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP 300
           GSLSKRWIVPGWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQAAVP+IL+Q 
Sbjct: 239 GSLSKRWIVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAVPTILEQT 298

Query: 301 DEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFC 360
           DE FFKKTLN LK S DIC + IKEIPCI   H+PEGSMA+M+KLNLSLL+D+ DDIDFC
Sbjct: 299 DESFFKKTLNSLKNSSDICCDWIKEIPCIDSSHRPEGSMAMMVKLNLSLLEDVSDDIDFC 358

Query: 361 FKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           FKLA+EESVI+LPGTAVGLKNWLR+TFA D  S+EE   RIK FY RHAK
Sbjct: 359 FKLAREESVILLPGTAVGLKNWLRITFAADATSIEEAFKRIKCFYLRHAK 408

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	415
TAIR|locus:2154714	414	TAT7 "tyrosine aminotransferas	0.978	0.980	0.712	7.7e-158
UNIPROTKB|Q9ST02	461	naat-A "Nicotianamine aminotra	0.978	0.880	0.529	1.3e-114
UNIPROTKB|Q9ST03	551	naat-B "Nicotianamine aminotra	0.978	0.736	0.531	5.8e-114
TAIR|locus:2046056	462	SUR1 "SUPERROOT 1" [Arabidopsi	0.980	0.880	0.492	1.2e-113
TAIR|locus:2158926	420	AT5G36160 [Arabidopsis thalian	0.975	0.964	0.518	1.1e-112
TAIR|locus:2121407	449	AT4G28420 [Arabidopsis thalian	0.975	0.902	0.478	7.5e-105
TAIR|locus:2121382	447	AT4G28410 [Arabidopsis thalian	0.951	0.883	0.444	2.4e-99
TAIR|locus:2047441	445	TAT3 "tyrosine aminotransferas	0.903	0.842	0.452	1.5e-97
TAIR|locus:2128434	424	AT4G23590 [Arabidopsis thalian	0.816	0.799	0.471	1.6e-86
TAIR|locus:2128459	422	CORI3 "CORONATINE INDUCED 1" [	0.821	0.808	0.469	8.9e-86

TAIR|locus:2154714 TAT7 "tyrosine aminotransferase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1538 (546.5 bits), Expect = 7.7e-158, P = 7.7e-158
 Identities = 292/410 (71%), Positives = 334/410 (81%)

Query:     3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNE--KKVISLAMGDPTVHSCFXXXXXXXXX 60
             + NG    T S ITIKG+LSLLM+S+  E++E  K+VISL MGDPT++SCF         
Sbjct:     1 MENGA--TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQA 58

Query:    61 XXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
                   S KF+GY+PT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L
Sbjct:    59 VSDSLLSNKFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSML 118

Query:   121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
             +RP ANILLPRPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +E+LAD+NTVALV+I
Sbjct:   119 ARPRANILLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVI 178

Query:   181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
             NPGNPCGNVYSYQHL K+AE+A KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTL
Sbjct:   179 NPGNPCGNVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTL 238

Query:   241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP 300
             GSLSKRWIVPGWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQAAVP+IL+Q 
Sbjct:   239 GSLSKRWIVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAVPTILEQT 298

Query:   301 DEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFC 360
             DE FFKKTLN LK S DIC + IKEIPCI   H+PEGSMA+M+KLNLSLL        FC
Sbjct:   299 DESFFKKTLNSLKNSSDICCDWIKEIPCIDSSHRPEGSMAMMVKLNLSLLEDVSDDIDFC 358

Query:   361 FKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
             FKLA+EESVI+LPGTAVGLKNWLR+TFA D  S+EE   RIK FY RHAK
Sbjct:   359 FKLAREESVILLPGTAVGLKNWLRITFAADATSIEEAFKRIKCFYLRHAK 408

GO:0005737 "cytoplasm" evidence=ISM

GO:0008483 "transaminase activity" evidence=ISS

GO:0009058 "biosynthetic process" evidence=ISS

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IGI;IMP;IDA;TAS

GO:0010189 "vitamin E biosynthetic process" evidence=IEP;IMP

UNIPROTKB|Q9ST02 naat-A "Nicotianamine aminotransferase A" [Hordeum vulgare (taxid:4513)]

 Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
 Identities = 216/408 (52%), Positives = 285/408 (69%)

Query:     5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXX 64
             +G +  TG+  +I+ +   +  SV+ E   + V+ LA GDP+V   F             
Sbjct:    49 DGILATTGAKNSIRAIRYKISASVE-ESGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAA 107

Query:    65 XXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP- 123
               + +FN YA   GLP  R A+AE+LS+ +PYKL+ +DVF+T+G TQAI+V + +L++  
Sbjct:   108 LRTGQFNCYAAGVGLPAARSAVAEHLSQGVPYKLSADDVFLTAGGTQAIEVIIPVLAQTA 167

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
             GANILLPRPG+P YE  AAF  +EVRHFDL+PDKGWE+D+D +ES+AD+NT A+VIINP 
Sbjct:   168 GANILLPRPGYPNYEARAAFNKLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPN 227

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCG+VYSY HL K+AE A KL  LVIADEVYG LV G  PF+PMGVFG   P+L++GSL
Sbjct:   228 NPCGSVYSYDHLAKVAEVARKLGILVIADEVYGKLVLGSAPFIPMGVFGHIAPVLSIGSL 287

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
             SK WIVPGWRLGW    DP  +  K K+   +  Y ++  DPATF+Q A+P IL+     
Sbjct:   288 SKSWIVPGWRLGWVAVYDPTKILEKTKISTSITNYLNVSTDPATFVQEALPKILENTKAD 347

Query:   304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKL 363
             FFK+ + LLK+S +ICY +IKE   I+CPHKPEGSM VM+KLNL LL        FC KL
Sbjct:   348 FFKRIIGLLKESSEICYREIKENKYITCPHKPEGSMFVMVKLNLHLLEEIHDDIDFCCKL 407

Query:   364 AKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
             AKEESVI+ PG+ +G++NW+R+TFA  P SL++ L+R+KSF QR+ K+
Sbjct:   408 AKEESVILCPGSVLGMENWVRITFACVPSSLQDGLERVKSFCQRNKKK 455

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

UNIPROTKB|Q9ST03 naat-B "Nicotianamine aminotransferase B" [Hordeum vulgare (taxid:4513)]

 Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
 Identities = 217/408 (53%), Positives = 284/408 (69%)

Query:     5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXX 64
             +G +  TG+ ++I+ +   +  SV  EK  + V+ LA GDP+V   F             
Sbjct:   139 DGVLAATGANMSIRAIRYKISASVQ-EKGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAA 197

Query:    65 XXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP- 123
               + +FN Y    GLP  R A+AE+LS+ +PY L+ +DVF+T+G TQAI+V + +L++  
Sbjct:   198 VRTGQFNCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVIIPVLAQTA 257

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
             GANILLPRPG+P YE  AAF  +EVRHFDL+PDKGWE+D+D +ES+AD+NT A+VIINP 
Sbjct:   258 GANILLPRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPN 317

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCG+VYSY HL K+AE A +L  LVIADEVYG LV G  PF+PMGVFG   P+L++GSL
Sbjct:   318 NPCGSVYSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITPVLSIGSL 377

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
             SK WIVPGWRLGW    DP  + ++ K+   +  Y ++  DPATFIQAA+P IL+   E 
Sbjct:   378 SKSWIVPGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAALPQILENTKED 437

Query:   304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKL 363
             FFK  + LLK+S +ICY +IKE   I+CPHKPEGSM VM+KLNL LL        FC KL
Sbjct:   438 FFKAIIGLLKESSEICYKQIKENKYITCPHKPEGSMFVMVKLNLHLLEEIDDDIDFCCKL 497

Query:   364 AKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
             AKEESVI+ PG+ +G+ NW+R+TFA  P SL++ L RIKSF QR+ K+
Sbjct:   498 AKEESVILCPGSVLGMANWVRITFACVPSSLQDGLGRIKSFCQRNKKR 545

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

TAIR|locus:2046056 SUR1 "SUPERROOT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1121 (399.7 bits), Expect = 1.2e-113, P = 1.2e-113
 Identities = 202/410 (49%), Positives = 284/410 (69%)

Query:     6 GGIDNTG--SIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXX 63
             GG D     S +T++G++ +L  +   + N K ++ L  GDP+V+ CF            
Sbjct:    36 GGSDKAAKASTVTLRGVIYMLFDNCGKDVN-KTILPLGHGDPSVYPCFRTCIEAEDAVVD 94

Query:    64 XXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
                S K N Y P AG+   RRA+A+Y++RDLP+KLTP D+F+T+GC Q I++    L+RP
Sbjct:    95 VLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARP 154

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
              ANILLPRPGFP Y+  AA+  +EVR FDLLP+K WE+DL+ IE++AD+NTVA+V+INP 
Sbjct:   155 NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPN 214

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCGNVYS+ HL+K+AETA KL  +VI+DEVY   +FGD PFV MG F S VP+LTL  +
Sbjct:   215 NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGI 274

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
             SK W+VPGW++GW    DP G+F   KV++ +K+  D+  DPAT IQAA+P+IL++ D+ 
Sbjct:   275 SKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKN 334

Query:   304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKL 363
             FF K   +LK +VD+  +++K+IPC+ CP KPE    ++ KL LSL+        FC KL
Sbjct:   335 FFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKL 394

Query:   364 AKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQ 413
             A+EE+++ LPG A+GLKNW+R+T  V+ + LE+ L+R+K F  RHAK+ +
Sbjct:   395 AREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKKTE 444

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;RCA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0016846 "carbon-sulfur lyase activity" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA;IMP

GO:0080108 "S-alkylthiohydroximate lyase activity" evidence=IMP

GO:0001560 "regulation of cell growth by extracellular stimulus" evidence=IMP

GO:0048830 "adventitious root development" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=IMP;RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019760 "glucosinolate metabolic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

TAIR|locus:2158926 AT5G36160 [Arabidopsis thaliana (taxid:3702)]

 Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
 Identities = 211/407 (51%), Positives = 282/407 (69%)

Query:     4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXX 63
             +N  ++ + S+ TI+  L+ L+  +D   + + VI L  GDP+    F            
Sbjct:    13 ANEVVERSNSL-TIRDYLNTLINCLDGG-DVRPVIPLGHGDPSPFPSFRTDQAAVEAICD 70

Query:    64 XXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
                S KFN Y+ ++G+P+ R+A+AEYLS DL Y+++PNDV +T+GC QAI++ ++ L+ P
Sbjct:    71 AVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQAIEILISALAIP 130

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
             GANILLPRP +P+Y+  AAF  +EVR+FDLLP+ GW+VDLD +E+LAD  TVA+++INP 
Sbjct:   131 GANILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADDKTVAILVINPC 190

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCGNV+S QHLQK+AETA KL  LVIADEVY H  FGDKPFV M  F   VP++ LG++
Sbjct:   191 NPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFAELVPVIVLGAI 250

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
             SKRW VPGWRLGW VT DP G+ +    V+ +    ++  DPATFIQ A+P I+    E 
Sbjct:   251 SKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQGAMPDIIGNTKEE 310

Query:   304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKL 363
             FF   L ++K+  +ICY ++ +IPCI+CP KPEGSM  M+KLN SLL        FC KL
Sbjct:   311 FFSSKLEMVKKCAEICYEELMKIPCITCPCKPEGSMFTMVKLNFSLLEDISDDLDFCSKL 370

Query:   364 AKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
             AKEES+IILPG AVGLKNWLR+TFAV+   L E   R+K+F +RH+K
Sbjct:   371 AKEESMIILPGQAVGLKNWLRITFAVELELLIEGFSRLKNFTERHSK 417

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IDA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IGI

GO:0006572 "tyrosine catabolic process" evidence=IGI

TAIR|locus:2121407 AT4G28420 [Arabidopsis thaliana (taxid:3702)]

 Score = 1038 (370.5 bits), Expect = 7.5e-105, P = 7.5e-105
 Identities = 196/410 (47%), Positives = 271/410 (66%)

Query:     7 GIDNTG--SIITIKGMLSLLMQSVD-DEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXX 63
             G DN    S +T++ ++  L      D K  K ++ LA GDP+V+ C+            
Sbjct:    31 GSDNAAKASSVTMRVIVYKLFDECSLDVK--KPLLPLAHGDPSVYPCYRTSILVENAVVD 88

Query:    64 XXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
                S K N Y P AG+   R+A+A+Y++RDL  K+ PNDVF+T GC Q I+V +  L+RP
Sbjct:    89 VLRSGKGNSYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSLARP 148

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
              ANILLPRP +P YE  A +  +EVR FDLLP+K WE+DL  IE++AD+NTVA+VIINP 
Sbjct:   149 NANILLPRPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVIINPN 208

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCGNVYSY HL+K+AETA KL  +VI DEVY   +FGDKPFVPMG F S  P++TLG +
Sbjct:   209 NPCGNVYSYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITLGGI 268

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
             SK WIVPGWR+GW    DP G+ +   +V+ +++  DI  D  T +QAA+P IL + ++ 
Sbjct:   269 SKGWIVPGWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQAALPEILGKANKE 328

Query:   304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKL 363
              F K  ++LKQ+V++  +++KEIPC+ C  KPE    ++ KL L LL        FC KL
Sbjct:   329 LFAKKNSMLKQNVELVCDRLKEIPCLVCNKKPESCTYLLTKLKLPLLEDIEDDMDFCMKL 388

Query:   364 AKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQ 413
             AKEE++++LPG A+GLKNW+R+T  V+   LE+ L+R+  F +RH K+ +
Sbjct:   389 AKEENLVLLPGVALGLKNWIRITIGVEAQMLEDALERLNGFCKRHLKKTE 438

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2121382 AT4G28410 [Arabidopsis thaliana (taxid:3702)]

 Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
 Identities = 176/396 (44%), Positives = 263/396 (66%)

Query:    15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYA 74
             +++KG L+ L      +  +K ++ L  GDP+V+ CF               S   N YA
Sbjct:    49 VSMKGTLARLFDCCSKDV-KKTILPLGHGDPSVYPCFQTSVDAEEAVVESLRSGAANSYA 107

Query:    75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
             P  G+   RRA+A YL+RDLP+K+  +D+F+T GC Q I+  +  L+ P ANILLP   +
Sbjct:   108 PGVGILPARRAVANYLNRDLPHKIHSDDIFMTVGCCQGIETMIHALAGPKANILLPTLIY 167

Query:   135 PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
             P+Y   A    +E+R ++LLPD  WE+DL  +E++AD+NT+A+VI+NP NPCGNVY+Y+H
Sbjct:   168 PLYNSHAIHSLVEIRKYNLLPDLDWEIDLQGVEAMADENTIAVVIMNPHNPCGNVYTYEH 227

Query:   195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254
             L+K+AE A KL  +VI+DEVY   ++G+  FVPMG+F S  P++TLGS+SK W+VPGWR+
Sbjct:   228 LKKVAEVARKLGIMVISDEVYNQTIYGENKFVPMGIFSSITPVVTLGSISKGWLVPGWRI 287

Query:   255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314
             GW    DP  +F+  +VVE +K++ DI  DP+T +Q A+P+IL++  + FF+K  ++L Q
Sbjct:   288 GWIAMNDPKNVFKTTRVVESIKEHLDISPDPSTILQFALPNILEKTKKEFFEKNNSILSQ 347

Query:   315 SVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPG 374
             +VD  ++ +K+IPC++CP KPE    ++ KL+LSLL        FC KLA+EE+++ LPG
Sbjct:   348 NVDFAFDALKDIPCLTCPKKPESCTYLVTKLDLSLLEDITNDFDFCMKLAQEENLVFLPG 407

Query:   375 TAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
               +GLKNW+R +  V+   LE+   R+K F+ RH K
Sbjct:   408 EVLGLKNWVRFSIGVERSMLEDAFMRLKGFFARHTK 443

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2047441 TAT3 "tyrosine aminotransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
 Identities = 170/376 (45%), Positives = 249/376 (66%)

Query:    35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
             K ++    G+P+ HS F               S   N YAP+ G+   RRA+AEYL+ +L
Sbjct:    49 KTILFPTPGEPSAHSNFRTCPEAEEAVAAAARSGMANSYAPSPGVFKARRAVAEYLNGEL 108

Query:    95 PYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
             P KL   DV++T GC QAI++ + +L   P ANILLPRPG+P Y+  A +  +E+R +DL
Sbjct:   109 PTKLKAEDVYITGGCNQAIEIVIDSLAGNPSANILLPRPGYPHYDARAVYSGLEIRKYDL 168

Query:   154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
             LP+  WE++LD +E+ AD+NTVA+VIINP NPCGNVY+Y HL K+AE A KL  ++I+DE
Sbjct:   169 LPESDWEINLDGLEAAADENTVAMVIINPNNPCGNVYTYDHLNKVAEMARKLGIMIISDE 228

Query:   214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
             VY H+V+GDKPF+PMG F S  P++TLGS+SK W+ PGWR+GW    DP G+F    VV+
Sbjct:   229 VYDHVVYGDKPFIPMGKFASIAPVITLGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQ 288

Query:   274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333
              ++ + D+   P+  +Q A+P IL++  + FF+K +  ++++V++   ++K+IPC+ CP 
Sbjct:   289 AIEDFLDLTPQPSFILQEALPDILEKTPKEFFEKKIKAMRRNVELSCERLKDIPCLFCPK 348

Query:   334 KPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS 393
             KPE    + LKL+ S+L        FC KL  EES+I++PG A+G +NW+R++   D   
Sbjct:   349 KPESCSYLWLKLDTSMLNNIKNDFDFCTKLVSEESLILIPGVALGAENWVRISIGTDESV 408

Query:   394 LEECLDRIKSFYQRHA 409
             ++E  DR+K FY RHA
Sbjct:   409 VQEIFDRLKGFYDRHA 424

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=ISS

TAIR|locus:2128434 AT4G23590 [Arabidopsis thaliana (taxid:3702)]

 Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
 Identities = 160/339 (47%), Positives = 232/339 (68%)

Query:    71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
             N YAP+ GLP+ +RA+AEYL+RDL  KLT +DV++T GC QAI++A+++L++P ANILLP
Sbjct:    71 NAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQAIELAVSILAKPKANILLP 130

Query:   131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190
             RPGFP   + + ++H+EVR ++ +P++ +E+D + +  + D+NT A+ IINP NP GN Y
Sbjct:   131 RPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVDENTFAIFIINPHNPNGNYY 190

Query:   191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250
             +  HL++LA  A +L  +V++DEVY   VFG  PFVPMG F S VP++TLGS+SK WIVP
Sbjct:   191 TEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKFSSIVPVITLGSISKGWIVP 250

Query:   251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLN 310
             GWR GW    D  G+FR  KV++  K++ +I   P T IQAA+P+IL++  + FF+K   
Sbjct:   251 GWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQAAIPTILEKTPQDFFEKRGI 310

Query:   311 LLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVI 370
              LK  VD  Y+K+K IP ++C  KPE    +  KL+            FC KLAKEE+++
Sbjct:   311 FLKDKVDFGYSKLKNIPTLTCYMKPESCTFLWTKLDPLHFVDIEDDHDFCRKLAKEENLV 370

Query:   371 ILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409
             +LPG A G  NWLR +  ++   LE+  +R+KSF +RH+
Sbjct:   371 VLPGIAFGQNNWLRHSIDMETPRLEDAFERLKSFCERHS 409

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2128459 CORI3 "CORONATINE INDUCED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 160/341 (46%), Positives = 231/341 (67%)

Query:    71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
             N YAP+ GL   + A+AEYL++ LP KLT +DVF+T GC QAI++A+ +L++P AN+LLP
Sbjct:    71 NAYAPSLGLAAAKSAVAEYLNQGLPKKLTADDVFMTLGCKQAIELAVDILAKPKANVLLP 130

Query:   131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190
              PGFP   + + ++++EVRH++ LP+K +E+D D + +L D+NT A+ IINP NP GN Y
Sbjct:   131 SPGFPWDLVRSIYKNLEVRHYNFLPEKNFEIDFDSVRALVDENTFAIFIINPHNPNGNTY 190

Query:   191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250
             S  HL++LAE A +LK +V++DEV+   +FG  PFVPMG F S VP++TLGS+SK W VP
Sbjct:   191 SEAHLKQLAELAKELKIMVVSDEVFRWTLFGSNPFVPMGKFSSIVPVVTLGSISKGWKVP 250

Query:   251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLN 310
             GWR GW    D  G+FR  KV++  + +  I  +P T IQAA+P IL++  + FF K  +
Sbjct:   251 GWRTGWLTLHDLDGVFRNTKVLQAAQDFLQINNNPPTVIQAAIPDILEKTPQEFFDKRQS 310

Query:   311 LLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVI 370
              LK  V+  Y+K+K IP ++C  KPE    +  +L+LS          FC KLAKEE+++
Sbjct:   311 FLKDKVEFGYSKLKYIPSLTCYMKPEACTFLWTELDLSSFVDIEDDQDFCNKLAKEENLV 370

Query:   371 ILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
             +LPG A   KNWLR +  ++   LE+ L+R+KSF  RH+ +
Sbjct:   371 VLPGIAFSQKNWLRHSIDMETPVLEDALERLKSFCDRHSNK 411

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IEP

GO:0008483 "transaminase activity" evidence=IEA;ISS;NAS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0010188 "response to microbial phytotoxin" evidence=IEP

GO:0004021 "L-alanine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004121 "cystathionine beta-lyase activity" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=TAS

GO:0050362 "L-tryptophan:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0048046 "apoplast" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ST02	NAATA_HORVU	2, ., 6, ., 1, ., 8, 0	0.5588	0.9783	0.8806	N/A	no
Q8QZR1	ATTY_MOUSE	2, ., 6, ., 1, ., 5	0.416	0.8915	0.8149	yes	no
Q54K95	ATTY_DICDI	2, ., 6, ., 1, ., 5	0.3578	0.9036	0.8992	yes	no
Q9FN30	TAT2_ARATH	2, ., 6, ., 1, ., -	0.7414	0.9783	0.9806	yes	no
P17735	ATTY_HUMAN	2, ., 6, ., 1, ., 5	0.408	0.8915	0.8149	yes	no
P04694	ATTY_RAT	2, ., 6, ., 1, ., 5	0.4106	0.8915	0.8149	yes	no
Q58CZ9	ATTY_BOVIN	2, ., 6, ., 1, ., 5	0.4026	0.8915	0.8277	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.766
4th Layer	4.4.1.8	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AMT7	aminotransferase family protein (EC-2.6.1.5) (407 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pm.C_LG_II000277	4-hydroxyphenylpyruvate dioxygenase (EC-1.13.11.27) (444 aa)						•			0.910
	eugene3.00051120	4-hydroxyphenylpyruvate dioxygenase (343 aa)						•			0.903
	gw1.XII.71.1	hypothetical protein (321 aa)						•			0.899
	gw1.X.450.1	hypothetical protein (323 aa)						•			0.899
	gw1.VIII.466.1	hypothetical protein (305 aa)						•			0.899
	gw1.VII.698.1	hypothetical protein (302 aa)						•			0.899
	gw1.IV.2899.1	hypothetical protein (306 aa)						•			0.899
	gw1.III.1437.1	hypothetical protein (291 aa)						•			0.899
	gw1.II.2473.1	hypothetical protein (303 aa)						•			0.899
	gw1.28.655.1	annotation not avaliable (78 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	415
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	0.0
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	0.0
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	0.0
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	0.0
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	1e-161
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	1e-122
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	1e-99
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	2e-86
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	6e-82
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	3e-64
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	2e-57
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	2e-53
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	1e-44
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	4e-41
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	9e-37
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	4e-36
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	6e-36
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	1e-35
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	1e-32
PTZ00377	481	PTZ00377, PTZ00377, alanine aminotransferase; Prov	1e-31
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	2e-30
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	3e-30
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	2e-29
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	3e-29
PRK06855	433	PRK06855, PRK06855, aminotransferase; Validated	2e-28
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	9e-28
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	1e-27
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	3e-27
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	7e-27
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	2e-26
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	8e-26
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	4e-25
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	5e-25
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	6e-24
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	2e-23
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	4e-23
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	5e-23
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	2e-21
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	5e-21
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	5e-20
PLN02368	407	PLN02368, PLN02368, alanine transaminase	2e-19
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	6e-19
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	1e-18
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	3e-18
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	7e-18
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	3e-17
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	1e-16
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	2e-16
PLN02231	534	PLN02231, PLN02231, alanine transaminase	7e-16
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	1e-15
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	1e-15
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	4e-15
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	6e-15
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	3e-14
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	4e-14
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	5e-14
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	6e-14
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	8e-14
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	4e-13
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	1e-12
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	6e-12
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	6e-11
PRK06207	405	PRK06207, PRK06207, aspartate aminotransferase; Pr	1e-10
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	2e-10
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	3e-10
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	3e-10
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	4e-10
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	6e-10
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	1e-09
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	7e-09
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	7e-09
PLN02450	468	PLN02450, PLN02450, 1-aminocyclopropane-1-carboxyl	7e-09
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	1e-08
PRK07392	360	PRK07392, PRK07392, threonine-phosphate decarboxyl	1e-08
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	2e-08
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	2e-08
TIGR03801	521	TIGR03801, asp_4_decarbox, aspartate 4-decarboxyla	2e-08
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	3e-08
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	3e-08
PRK08637	388	PRK08637, PRK08637, hypothetical protein; Provisio	3e-08
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	5e-08
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	8e-08
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	9e-08
PRK08636	403	PRK08636, PRK08636, aspartate aminotransferase; Pr	1e-07
PRK07908	349	PRK07908, PRK07908, hypothetical protein; Provisio	2e-07
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	2e-07
PRK04781	364	PRK04781, PRK04781, histidinol-phosphate aminotran	1e-06
PRK07366	388	PRK07366, PRK07366, succinyldiaminopimelate transa	2e-06
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	7e-06
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	1e-05
PRK09105	370	PRK09105, PRK09105, putative aminotransferase; Pro	3e-05
PRK04635	354	PRK04635, PRK04635, histidinol-phosphate aminotran	8e-05
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	1e-04
COG0626	396	COG0626, MetC, Cystathionine beta-lyases/cystathio	1e-04
cd00614	369	cd00614, CGS_like, CGS_like: Cystathionine gamma-s	4e-04
COG2008	342	COG2008, GLY1, Threonine aldolase [Amino acid tran	6e-04
pfam00266	370	pfam00266, Aminotran_5, Aminotransferase class-V	0.001
PRK00451	447	PRK00451, PRK00451, glycine dehydrogenase subunit	0.001
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	0.003

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score =  765 bits (1976), Expect = 0.0
 Identities = 327/402 (81%), Positives = 364/402 (90%)

Query: 10  NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK 69
           +T   ITIKG+LSLLM+S+DDE+N K+VISL MGDPT +SCFHTTHVA EAV +AL S K
Sbjct: 6   DTTKTITIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNK 65

Query: 70  FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129
           FNGYAPT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L+RPGANILL
Sbjct: 66  FNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILL 125

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           PRPGFPIYEL AAFRH+EVR+ DLLP+KGWEVDLD +E+LADQNTVALVIINPGNPCGNV
Sbjct: 126 PRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNV 185

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSYQHL+K+AETA KLK LVIADEVYGHL FG  PFVPMGVFGS VP+LTLGSLSKRWIV
Sbjct: 186 YSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIV 245

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTL 309
           PGWRLGWFVTTDP G FR PK+VER+KKYFDILG PATFIQAAVP+IL+Q DE FFKKT+
Sbjct: 246 PGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTI 305

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
           N+LKQS DIC ++IKEIPCI+CPHKPEGSMAVM+KLNLSLL+DI DDIDFCFKLA+EESV
Sbjct: 306 NILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESV 365

Query: 370 IILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
           IILPGTAVGLKNWLR+TFA DP SLEE L RIKSFY RH+K 
Sbjct: 366 IILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSKT 407

Length = 409

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  644 bits (1662), Expect = 0.0
 Identities = 244/395 (61%), Positives = 310/395 (78%)

Query: 16  TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP 75
           +I+ +L+ +   VD     + V+ L  GDP+   CF T   A +AVA AL S K+N Y+ 
Sbjct: 33  SIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYST 92

Query: 76  TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
             GL   RRAIAEYLSRDLPY+L+ +D+++T+GC QAI++ M++L++PGANILLPRPG+P
Sbjct: 93  CVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYP 152

Query: 136 IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195
           +YE  A F  +EVRHFDLLP++GWEVDL+ +E+LAD+NTVA+VIINP NPCG+VYSY+HL
Sbjct: 153 LYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHL 212

Query: 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
            K+AETA KL  LVIADEVY HL FG KPFVPMGVFG   P+LTLGS+SKRW+VPGWRLG
Sbjct: 213 AKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLG 272

Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315
           W  T DP G+ ++ KVV+ ++ Y +I  DPATF+Q A+P I+    E FF KTL LLK++
Sbjct: 273 WIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKET 332

Query: 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT 375
            DICY KIKEI CI+CPHKPEGSM VM+KL+LS L  I DD+DFC KLAKEESV++LPG+
Sbjct: 333 ADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGS 392

Query: 376 AVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           A+G+KNWLR+TFA+DP SLE+ L+R+KSF  RHAK
Sbjct: 393 ALGMKNWLRITFAIDPPSLEDGLERLKSFCLRHAK 427

Length = 430

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score =  560 bits (1445), Expect = 0.0
 Identities = 209/376 (55%), Positives = 273/376 (72%), Gaps = 2/376 (0%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           EK VI L+ GDP+V     T   A EAV +AL S KFNGYAP+ G    R A+AEYLS D
Sbjct: 30  EKPVIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSD 89

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
           LP KLT +DV +TSGC+QAI++ +  L+ PGANIL+PRPGFP+Y+  AAF  +EVR +DL
Sbjct: 90  LPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDL 149

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DLD +ESLAD+ TVA+V+INP NPCG+V+S  HLQK+AE A KL   +IADE
Sbjct: 150 LPEKDWEIDLDGLESLADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIADE 209

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           +YGH+VFGD PF+PM  F S VP+L+LG +SKRW+VPGWRLGW +  DP G+FR   V++
Sbjct: 210 IYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRD-TVLQ 268

Query: 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333
            +K     +  PAT +Q A+P IL+   + FF   +++LK + ++CY ++K+IP + CP 
Sbjct: 269 GLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCP- 327

Query: 334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS 393
           KPEG+M +M+KL L L  +I DD+DFC KLA+EESVI LPG+A GL NW+R+T  V    
Sbjct: 328 KPEGAMYLMVKLELELFPEIKDDVDFCEKLAREESVICLPGSAFGLPNWVRITITVPESM 387

Query: 394 LEECLDRIKSFYQRHA 409
           LEE   RIK F +RHA
Sbjct: 388 LEEACSRIKEFCERHA 403

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  555 bits (1431), Expect = 0.0
 Identities = 232/396 (58%), Positives = 305/396 (77%), Gaps = 1/396 (0%)

Query: 16  TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP 75
           +I   +  L ++ + E + +  IS   GDP+   CF TT++A +A+ EA+ S KFN YAP
Sbjct: 14  SIDDAVKFLKENFN-EDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAP 72

Query: 76  TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           T G+   RRAIA+YLS DLPY+L+P+DV++T GC  A ++ + +L+RP ANILLPRPGFP
Sbjct: 73  TGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFP 132

Query: 136 IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195
             E  A F H+E+RHFDLLP+KGWEVDLD +E++AD+NT+A+VIINPGNPCG+VYSY+HL
Sbjct: 133 DVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHL 192

Query: 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
            K+AETA KL  LVIADEVYGH+VFG KPFVPMG+F S VP++TLGS+SKRW++PGW LG
Sbjct: 193 NKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLG 252

Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315
           W VT DP G+ +  ++ + +KK  +    P TFIQAA+P IL++  E FF KT+N+L+ +
Sbjct: 253 WLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAA 312

Query: 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT 375
           +  CY+K+KEIPCI CP K EG+   ++KLNL LL+DI DD++FC KLAKEES+IILPG 
Sbjct: 313 LAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGV 372

Query: 376 AVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
            VGLKNWLR+TFAV+  SLE+ L R+KSF  RHAK+
Sbjct: 373 TVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408

Length = 409

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score =  461 bits (1187), Expect = e-161
 Identities = 213/410 (51%), Positives = 298/410 (72%), Gaps = 3/410 (0%)

Query: 6   GGIDNTG--SIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAE 63
           GG D     S +T++G++ +L  +   + N K ++ L  GDP+V+ CF T   A +AV +
Sbjct: 36  GGSDKAAKASTVTLRGVIYMLFDNCGKDVN-KTILPLGHGDPSVYPCFRTCIEAEDAVVD 94

Query: 64  ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
            L S K N Y P AG+   RRA+A+Y++RDLP+KLTP D+F+T+GC Q I++    L+RP
Sbjct: 95  VLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARP 154

Query: 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
            ANILLPRPGFP Y+  AA+  +EVR FDLLP+K WE+DL+ IE++AD+NTVA+V+INP 
Sbjct: 155 NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPN 214

Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
           NPCGNVYS+ HL+K+AETA KL  +VI+DEVY   +FGD PFV MG F S VP+LTL  +
Sbjct: 215 NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGI 274

Query: 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
           SK W+VPGW++GW    DP G+F   KV++ +K+  D+  DPAT IQAA+P+IL++ D+ 
Sbjct: 275 SKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKN 334

Query: 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL 363
           FF K   +LK +VD+  +++K+IPC+ CP KPE    ++ KL LSL+D+I DDIDFC KL
Sbjct: 335 FFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKL 394

Query: 364 AKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQ 413
           A+EE+++ LPG A+GLKNW+R+T  V+ + LE+ L+R+K F  RHAK+ +
Sbjct: 395 AREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKKTE 444

Length = 462

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score =  359 bits (924), Expect = e-122
 Identities = 153/377 (40%), Positives = 227/377 (60%), Gaps = 6/377 (1%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           EK VI L++GDPTV     T     +A+ ++L S K+NGYAPT G    R AIA Y   +
Sbjct: 30  EKPVIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASY-YHN 88

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
               +  +DV + SGC+ AI++ +A L+  G NIL+PRPGFP+Y   A    IEV+ ++L
Sbjct: 89  PDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYRTLAESMGIEVKLYNL 148

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LPDK WE+DL  +ESL D+ T ALV+ NP NPCG+V+S QHL+++   A +    +IADE
Sbjct: 149 LPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADE 208

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV-V 272
           +YG +VF    F P+    S VPIL+ G L+KRW+VPGWRLGW +  D  G+ R  +  +
Sbjct: 209 IYGDMVFSGATFEPVASLSSNVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGL 268

Query: 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332
            ++ +   ILG P T +Q A+PSIL +  + +F  TL++L+ +  +CY  +  +P +  P
Sbjct: 269 VKLSQR--ILG-PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLQ-P 324

Query: 333 HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPY 392
             P G+M +M+ + +    +  +D++F  +L  E+SV  LPG+      + RV   V   
Sbjct: 325 VMPSGAMYMMVGIEMEHFPEFKNDVEFTERLIAEQSVFCLPGSCFEYPGFFRVVLTVPVV 384

Query: 393 SLEECLDRIKSFYQRHA 409
            +EE   RI+ F +RH 
Sbjct: 385 MMEEACSRIQEFCERHY 401

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score =  302 bits (775), Expect = 1e-99
 Identities = 136/382 (35%), Positives = 213/382 (55%), Gaps = 9/382 (2%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K +I L++GDPT+     T  + T+A+ EA+ S++ NGY PT G P  R A+A Y     
Sbjct: 33  KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSF 92

Query: 95  PYK------LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
            +K      +  ++V + SG + AI +A+  L   G NIL+P PGFP YE       IE+
Sbjct: 93  VHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEM 152

Query: 149 RHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
           R ++  P+K WE DLD+I  L D  T AL++ NP NPCG+ +S +H++ +     +L+  
Sbjct: 153 RFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLP 212

Query: 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           +I+DE+Y  +VF    F  +  F +TVP + LG  +K  +VPGWRLGW +  DP G    
Sbjct: 213 LISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN--G 270

Query: 269 PKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC 328
              ++ MK+   ++  P + +QAA+   L    +   ++ +  L++   + YN I E   
Sbjct: 271 GDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIG 330

Query: 329 ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA 388
           +S    P GSM +M +L+L    DI  D++F  KL +EE+V +LPG    +  + R+T +
Sbjct: 331 LSPT-MPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS 389

Query: 389 VDPYSLEECLDRIKSFYQRHAK 410
                L E ++RIK+F +RH K
Sbjct: 390 RPVEVLREAVERIKAFCERHKK 411

Length = 412

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  266 bits (682), Expect = 2e-86
 Identities = 113/368 (30%), Positives = 181/368 (49%), Gaps = 22/368 (5%)

Query: 38  ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK 97
           I L++G+P     F       EA+A A L     GY P  GLP  R AIAE+L R     
Sbjct: 1   IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVD 56

Query: 98  LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157
           + P ++ VT+G  +A+ + +  L  PG  +L+P P +P YE +A     EV    L  + 
Sbjct: 57  VPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEG 116

Query: 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217
           G+ +DL+ +E+     T  L + NP NP G V S + L++LAE A K   L+I+DE Y  
Sbjct: 117 GFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAE 176

Query: 218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277
           LV+  +P   + +  +   ++ L S SK + +PG R+G+ +           +++ER+KK
Sbjct: 177 LVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLKK 229

Query: 278 YFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE 336
                   P+T  QAA  + L   +E   ++     ++  D     +KE+  +    KP 
Sbjct: 230 LLPYTTSGPSTLSQAAAAAALDDGEE-HLEELRERYRRRRDALLEALKELGPLVV-VKPS 287

Query: 337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--LKNWLRVTFAVDPYSL 394
           G   + L L         DD +F  +L  E  V++ PG+A G   + ++R++FA     L
Sbjct: 288 GGFFLWLDLP------EGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEEL 341

Query: 395 EECLDRIK 402
           EE L+R+ 
Sbjct: 342 EEALERLA 349

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  256 bits (656), Expect = 6e-82
 Identities = 107/388 (27%), Positives = 186/388 (47%), Gaps = 25/388 (6%)

Query: 30  DEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEY 89
           + K ++ VI L++G+P     F T     EA  EAL       Y P+AG+P  R AIAE 
Sbjct: 23  ELKGKEDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEK 77

Query: 90  LSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
             R     + P  ++ VT+G  +A+ +A   L  PG  +L+P PG+P YE +      + 
Sbjct: 78  YKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKP 137

Query: 149 RHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
               L   + G++ DL+D+E+     T A+++ +P NP G VYS + L+ + E A +   
Sbjct: 138 VPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDI 197

Query: 208 LVIADEVYGHLVFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           ++I+DE+Y  LV+       +  + G+    +T+ S SK + + GWR+GW V        
Sbjct: 198 IIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVG------- 250

Query: 267 RKPKVVERMKKYFDILGD-PATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIK 324
              +++  ++K    L     T  Q A  + L  P      ++     ++  D+    + 
Sbjct: 251 PPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALN 310

Query: 325 EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KN 381
           EI  +S    PEG+  +  K     + +++D  +F  KL +E  V ++PG+  G    + 
Sbjct: 311 EIGGLSVVKPPEGAFYLFPK-----IPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEG 365

Query: 382 WLRVTFAVDPYSLEECLDRIKSFYQRHA 409
           ++R++ A    +LEE L R+  F   + 
Sbjct: 366 YVRLSLATSEETLEEALRRLARFLAEYR 393

Length = 393

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score =  210 bits (538), Expect = 3e-64
 Identities = 112/386 (29%), Positives = 179/386 (46%), Gaps = 44/386 (11%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           + VISL  G+P     F T     EA  EAL  +    Y P AG+P  R AIA  L RD 
Sbjct: 31  RDVISLGAGEPD----FDTPEHIKEAAIEALD-DGKTKYTPAAGIPELREAIAAKLKRDN 85

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
                P+ V VT+G  QA+  A   L  PG  +++P P +  Y                 
Sbjct: 86  GLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTG 145

Query: 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214
            + G+++ ++ +E+     T AL++ +P NP G VYS + L+ +A+ A +    V++DE+
Sbjct: 146 EENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEI 205

Query: 215 YGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269
           Y  LV+    F  +    S  P      +T+   SK + + GWRLG+             
Sbjct: 206 YEKLVYDGAEFTSI---ASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG--------PK 254

Query: 270 KVVERMKKYFDILGD----PATFIQ-AAVPSILQQPDEVF------FKKTLNLLKQSVDI 318
           ++++ M K   +       P +  Q AAV + L  P +        F++  +L+      
Sbjct: 255 ELIKAMSK---LQSHSTSNPTSIAQYAAVAA-LNGPQDEVEEMRQAFEERRDLM------ 304

Query: 319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG 378
             + + EIP + CP KPEG+  V   ++  L   I D ++F   L +E  V ++PG A G
Sbjct: 305 -VDGLNEIPGLECP-KPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG 362

Query: 379 LKNWLRVTFAVDPYSLEECLDRIKSF 404
              ++R+++A     LEE L+RI+ F
Sbjct: 363 APGYVRLSYATSLEDLEEGLERIERF 388

Length = 393

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  192 bits (489), Expect = 2e-57
 Identities = 96/383 (25%), Positives = 154/383 (40%), Gaps = 42/383 (10%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
              I+L   +    S   T     +A  +AL     N Y PT GLP  R A+A++L R  
Sbjct: 1   TDKINLGSNEYLGDS--GTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSP 58

Query: 95  PYKLTPND-VFVTSGCTQAIDVAMALLSR-PGANILLPRPGFPIYELSAAFRHIEVRHFD 152
             KL     V   SG    I+  + LL   PG  IL+P P +P Y         EV  + 
Sbjct: 59  VLKLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRYP 118

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVII---NPGNPCGNVYSYQHLQKLAETANKLKTLV 209
           L     + +D D +E+   + T    ++   +P NP G V + + L+KL + A +   L+
Sbjct: 119 LYSSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILL 178

Query: 210 IADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           + DE Y   VFG    V      +    +L +GS SK + + GWR+G+ +          
Sbjct: 179 LVDEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAA------ 232

Query: 269 PKVVERMKK-----YFDILGDPATFIQAAVPSILQQPDEV--FFKKTLNLLKQSVDICYN 321
             V+ +++K     Y           QAA  + L  P  V    ++    +K+  D   +
Sbjct: 233 --VISQLRKLARPFYSSTHL------QAAAAAALSDPLLVASELEEMRQRIKERRDYLRD 284

Query: 322 KIKEI--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL 379
            ++      +      +    ++  L+                L +E  V + PG++ G 
Sbjct: 285 GLEAAGLSVL----PSQAGFFLLTGLDPEAAL------ALAQVLLEEVGVYVTPGSSFGG 334

Query: 380 KNWLRVTFA-VDPYSLEECLDRI 401
             WLR+T A      LEE L+ I
Sbjct: 335 PGWLRITVAGGTEEELEELLEAI 357

Length = 357

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score =  182 bits (464), Expect = 2e-53
 Identities = 121/386 (31%), Positives = 181/386 (46%), Gaps = 18/386 (4%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           EK   KVI L +GDP V   F       EA   A+  E  N Y P+ GLP  R AI +  
Sbjct: 26  EKKGIKVIRLNIGDP-VKFDFQPPEHMKEAYCRAI-KEGHNYYGPSEGLPELREAIVKRE 83

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     +TP+DV VT+  T+A+ +    L  PG  IL+P P +P Y     F       
Sbjct: 84  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVE 143

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           +  + ++GW+ D+DDI     + T A+ +INP NP G +Y  + L+++ + A +    VI
Sbjct: 144 YRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVI 203

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DE+Y  + +  K  V  G     VP++ +  LSK +   GWRLG+    DP G  +  +
Sbjct: 204 SDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEG--KLAE 260

Query: 271 VVERMKKYFDILGDPATFIQ-AAVPSILQQPD--EVFFKKTLNLLKQSVDICYNKIKEIP 327
           V E + K   I   P T  Q AA+  +    D  E + KK    LK+  D  Y ++ EIP
Sbjct: 261 VREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKK----LKERRDYIYKRLNEIP 316

Query: 328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-LKNW-LRV 385
            IS   KP+G+  +  ++         DD +F   +  E  V+ + G+  G       R+
Sbjct: 317 GISTT-KPQGAFYIFPRIEEGPWK---DDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRL 372

Query: 386 TFAVDPYSLEECLDRIKSFYQRHAKQ 411
            F      LEE +DR + F +     
Sbjct: 373 VFLPPVEILEEAMDRFEEFMRERLGS 398

Length = 398

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score =  159 bits (404), Expect = 1e-44
 Identities = 105/362 (29%), Positives = 170/362 (46%), Gaps = 47/362 (12%)

Query: 72  GYAPTAGLPLTRRAIA-EYLSRDLPYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGANILL 129
           GY+ + GL   R+AI   Y  + +P  +  +D+++ +G ++ I +AM ALL+  G  +L+
Sbjct: 67  GYSDSKGLFSARKAIMQYYQQKGIP-DVDVDDIYIGNGVSELIVMAMQALLN-NGDEVLV 124

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           P P +P++  + +    +  H+    + GW  DLDDI S     T A+VIINP NP G V
Sbjct: 125 PAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAV 184

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YS + L+++ E A +   ++ ADE+Y  +++     + +      +  +T   LSK + V
Sbjct: 185 YSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRV 244

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYF---DILGD-------PATF-IQAAV---PS 295
            G+R+GW V + P          +  K Y    D+L         PA   IQ A+    S
Sbjct: 245 AGFRVGWMVLSGP---------KKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQS 295

Query: 296 I--LQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353
           I  L  P          L +Q  D  +  +  IP +SC  KP+G++    KL+  +   I
Sbjct: 296 INELILPGG-------RLYEQR-DRAWELLNAIPGVSC-VKPKGALYAFPKLDPKVY-PI 345

Query: 354 IDDIDFCFKLAKEESVIILPGTAVGLKNW-----LRVTFAVDPYSLEECLDRIKSFYQRH 408
            DD  F   L  +E V+++ GT     NW      R+        LEE + RI  F   +
Sbjct: 346 HDDEQFVLDLLLQEKVLLVQGTGF---NWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSGY 402

Query: 409 AK 410
            +
Sbjct: 403 RQ 404

Length = 404

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score =  149 bits (378), Expect = 4e-41
 Identities = 98/360 (27%), Positives = 161/360 (44%), Gaps = 32/360 (8%)

Query: 59  EAVAEALLS-EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117
           +A A AL   E F  Y    G+P  R A+A Y+SR       P  + VTS   QA+ +A 
Sbjct: 44  DAAAAALADGETF--YTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101

Query: 118 ALLSRPGANILLPRPGFP-----IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172
             L  PG  ++   P +P        L A    + +         GW +DLD + +    
Sbjct: 102 QALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDF----GGGGWTLDLDRLLAAITP 157

Query: 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP--MGV 230
            T AL I +P NP G   S   L+ +     +    ++ADEVY  L +      P  + +
Sbjct: 158 RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDI 217

Query: 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK-PKVVERMKKYFDILGDPATFI 289
                 I+ + S SK W + GWRLGW V   P  + +   K++E     ++       F+
Sbjct: 218 AEPDDRIIFVNSFSKNWAMTGWRLGWLVA--PPALGQVLEKLIE-----YNTSCVA-QFV 269

Query: 290 QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349
           Q A  + L + ++ F  + +  L++S D   + ++ +P +    KP+G+M    +     
Sbjct: 270 QRAAVAALDEGED-FVAELVARLRRSRDHLVDALRALPGVEVA-KPDGAMYAFFR----- 322

Query: 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407
           +  + D +    +L  E  + + PGTA G   + +LR  FA DP  L+E ++R++ F  R
Sbjct: 323 IPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLAR 382

Length = 382

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score =  137 bits (347), Expect = 9e-37
 Identities = 94/399 (23%), Positives = 181/399 (45%), Gaps = 50/399 (12%)

Query: 20  MLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG---YAPT 76
            ++++ +     K    +I L++GDP +        +  E++  A   +   G   Y  +
Sbjct: 14  EVNIMAEIATLAKKFPDIIDLSLGDPDL--------ITDESIINAAFEDAKKGHTRYTDS 65

Query: 77  AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI 136
            G       I +Y S++       N++  T G    + +A+  +  PG  +++  P F  
Sbjct: 66  GGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTP 125

Query: 137 Y----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
           Y    E+        +   +   + G+++++  +E+L    T A+++ +P NP G V+S 
Sbjct: 126 YKDQIEMV---GGKPI-ILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSK 181

Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPG 251
           + L+++A+ A +    +I+DEVY    F +  FVPM    G     +T GS SK + + G
Sbjct: 182 ETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTG 240

Query: 252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP-------DEVF 304
           WR+G+ +  D         ++E  K    I+ +   F   + P+I Q+         +  
Sbjct: 241 WRIGYVIAPD--------YIIETAK----IINEGICF---SAPTISQRAAIYALKHRDTI 285

Query: 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLA 364
                   ++ ++  Y +I+ IP +S  H P+GS  +   +N+      +  ++FC KL 
Sbjct: 286 VPLIKEEFQKRLEYAYKRIESIPNLSL-HPPKGS--IYAFINIK--KTGLSSVEFCEKLL 340

Query: 365 KEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRI 401
           KE  V+++PG A G   + ++R+   V    LEE  +RI
Sbjct: 341 KEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRI 379

Length = 384

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score =  137 bits (347), Expect = 4e-36
 Identities = 94/359 (26%), Positives = 156/359 (43%), Gaps = 43/359 (11%)

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V     +     Y PTAGLP  R AIA YL         P  + +TSG  QA+D+ + LL
Sbjct: 116 VLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLL 175

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQNTVALVI 179
             PG  +L+  P +P      A   +  R   + + + G   D + +E    Q     V 
Sbjct: 176 LDPGDTVLVEDPTYP--GALQALEALGARVIPVPVDEDGI--DPEALEEALAQWKPKAVY 231

Query: 180 INP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI 237
           + P   NP G   S +  + L   A K   L+I D+ YG L +   P  P+    +   +
Sbjct: 232 VTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRV 291

Query: 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSIL 297
           + LGS SK  + PG RLG+ V   P  +  K   + R+K+  D+   P++  QAA+ + L
Sbjct: 292 IYLGSFSKT-LAPGLRLGYVVA--PPELIEK---LLRLKQAADL--GPSSLSQAALAAFL 343

Query: 298 QQPDEVFFKKTLNLLKQSVDICYNKIKEI---------PCISCPHKPEGSMAVMLKLNLS 348
                  + + L  L++     Y + ++          P ++   +PEG + + L+    
Sbjct: 344 LSGH---YDRHLRRLRRE----YARRRDALLEALAEYLPELATWTRPEGGLFLWLE---- 392

Query: 349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGL-----KNWLRVTFA-VDPYSLEECLDRI 401
            L + ID  +     A E+ V++ P  +        +N LR++F+      +EE + R+
Sbjct: 393 -LPEGIDAREL-LAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRL 449

Length = 459

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score =  137 bits (348), Expect = 6e-36
 Identities = 101/395 (25%), Positives = 181/395 (45%), Gaps = 34/395 (8%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E     ++ L +G+P     F T       +A+ L   +  GY+ + GL   R+AI +Y 
Sbjct: 142 EAAGTHILKLNIGNPAPFG-FRTPDEVVYDMAQQLTDTE--GYSDSKGLFSARKAIMQYA 198

Query: 91  -SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149
             + LP  +  +D++  +G ++ I+++M+ L   G  +L+P P +P++            
Sbjct: 199 QLKGLP-NVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAV 257

Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
           H+       W  D+DDI S     T A+VIINP NP G +Y  + LQ++ + A + + ++
Sbjct: 258 HYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLII 317

Query: 210 IADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269
            +DE+Y  LV        +      +  +T   LSK  ++ G+R+GW + +       K 
Sbjct: 318 FSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSG-----NK- 371

Query: 270 KVVERMKKYFDILGDPATF-IQAAVP--SILQ------QPDEVFFKKTLNLLKQSVDICY 320
                 K Y + L   A   + + VP  SI+Q      Q  + +      + +Q  ++ Y
Sbjct: 372 ---RIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQR-ELVY 427

Query: 321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK 380
           N +  IP IS   KP+ +  +  K+++    +I DD  F   L  ++ V+I+ GT     
Sbjct: 428 NALNAIPGISAV-KPKAAFYIFPKIDVKKF-NIHDDEQFALDLLHDKKVLIVQGTGF--- 482

Query: 381 NW-----LRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           NW      RV +      LE+ +DR+  F+  + +
Sbjct: 483 NWDKPDHFRVVYLPRLEDLEDAMDRLADFFSYYRQ 517

Length = 517

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score =  135 bits (340), Expect = 1e-35
 Identities = 99/374 (26%), Positives = 176/374 (47%), Gaps = 27/374 (7%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           + VISL +G+P     F T     EA   AL  E +  Y P AG+P  R AIAEY  +  
Sbjct: 33  ENVISLGIGEPD----FDTPKNIKEAAKRAL-DEGWTHYTPNAGIPELREAIAEYYKKFY 87

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
              +  ++V VT+G  +A  +A   L   G  +++P P F  Y   A     +     L 
Sbjct: 88  GVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLR 147

Query: 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214
            +  ++ D D++  L  + T  +VI  P NP G     +  + +A+ A      +++DE 
Sbjct: 148 EENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEP 207

Query: 215 YGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274
           Y H ++      PM  +     IL   S SK + + GWRLG+ +           +V++ 
Sbjct: 208 YEHFLYEGAKHYPMIKYAPDNTILA-NSFSKTFAMTGWRLGFVIA--------PEQVIKD 258

Query: 275 MKK-YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD---ICYNKIKEIPCIS 330
           M K +  I+G+ A+F+Q A    L+   +  +K    + K+  +   +   ++KE+P I 
Sbjct: 259 MIKLHAYIIGNVASFVQIAGIEALR--SKESWKAVEEMRKEYNERRKLVLKRLKEMPHIK 316

Query: 331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA 388
              +P+G+  V   ++    +  +   DF   L ++  V+++PGTA G   + ++R+++A
Sbjct: 317 -VFEPKGAFYVFANID----ETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA 371

Query: 389 VDPYSLEECLDRIK 402
                L E ++R++
Sbjct: 372 TSKEKLIEAMERME 385

Length = 391

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score =  126 bits (319), Expect = 1e-32
 Identities = 102/385 (26%), Positives = 181/385 (47%), Gaps = 36/385 (9%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +K   KV  L +G P +     T  V  EA+      E+   Y+ + G+P  R A A+Y 
Sbjct: 26  KKRGIKVYHLNIGQPDIK----TPEVFFEAIKNY--DEEVLAYSHSQGIPELREAFAKYY 79

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            +     + P+++ +T+G ++AI  AM  +  PG  IL+P P +  Y   A    +++  
Sbjct: 80  KK-WGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVP 138

Query: 151 FDLLPDKGWEV-DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
                ++G+ +   ++IE L    T A++I NPGNP G VY+ + L+ LAE A K    +
Sbjct: 139 VTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFL 198

Query: 210 IADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           I+DEVY   V+    +       G    ++ + S+SKR+   G R+G  ++       + 
Sbjct: 199 ISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLIS-------KN 251

Query: 269 PKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC 328
            +++    K       P T  Q    ++L  P+  +F +     K+  DI Y ++ +IP 
Sbjct: 252 KELIAAAMKLCQARLSPPTLEQIGAAALLDTPES-YFDEVREEYKKRRDILYEELNKIPG 310

Query: 329 ISCPHKPEGSMAVMLKLNLSLLDDIIDDI-DFCFKLAKE-----ESVIILPG----TAVG 378
           + C  KP+G+  ++ KL        +DD  DF   L  +     E+V++ P        G
Sbjct: 311 VVC-EKPKGAFYIIAKLP-------VDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPG 362

Query: 379 L-KNWLRVTFAVDPYSLEECLDRIK 402
           L KN +R+ + ++   L+  ++ +K
Sbjct: 363 LGKNEIRIAYVLNEEDLKRAMEILK 387

Length = 397

>gnl|CDD|240391 PTZ00377, PTZ00377, alanine aminotransferase; Provisional

 Score =  125 bits (316), Expect = 1e-31
 Identities = 102/417 (24%), Positives = 192/417 (46%), Gaps = 64/417 (15%)

Query: 42  MGDPTVHSCFHTTHVATEAVAEALLSEKFNG---YAPTAGLPLTRRAIAEYLSRDLPYKL 98
           + DP+V S F    VA    A+  L+    G   Y  +AG P  R+A+A ++ R      
Sbjct: 80  LEDPSVSSLFPADVVAR---AKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPK 136

Query: 99  TPNDVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157
            P+D+F+T G +  I + +  L+  P   +++P P +P+Y  +      +   + L  +K
Sbjct: 137 DPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEK 196

Query: 158 GWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
           GW +D +++E   +Q         ALV+INPGNP G V +   ++++ +   +   +++A
Sbjct: 197 GWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMA 256

Query: 212 DEVYGHLVF-GDKPFVPM--------GVFGSTVPILTLGSLSKRWIVP-GWRLGWF-VTT 260
           DEVY   ++ G+KPF+            + + V +++  S SK  I   G R G+F +T 
Sbjct: 257 DEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTN 316

Query: 261 DPCGMFRKPKVVERMKKYF--------------DILGDPATFIQAAVPSILQQPDEVFFK 306
            P      P+V E++ K                 ++ +P     A+ P   ++ D +F  
Sbjct: 317 IP------PEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIF-- 368

Query: 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIID---------DI 357
                LK+  ++  +++ +I  +SC    EG+M    ++ L   +  I          D+
Sbjct: 369 ---TSLKRRAELLTDELNKIEGVSC-QPVEGAMYAFPRIELP--EKAIQEAKERGLAPDV 422

Query: 358 DFCFKLAKEESVIILPGTAVGLK---NWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
            +C +L +   ++++PG+  G K      R+T       +EE + +IK F++   K+
Sbjct: 423 LYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKK 479

Length = 481

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score =  120 bits (302), Expect = 2e-30
 Identities = 101/390 (25%), Positives = 178/390 (45%), Gaps = 48/390 (12%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR--DL 94
           ++ L +G+P     F T     EA   A+     + Y   AGL   R+A A+++    +L
Sbjct: 32  ILKLTLGEPD----FTTPDHVKEAAKRAI-DANQSHYTGMAGLLELRQAAADFVKEKYNL 86

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV------ 148
            Y    N++ VT G T+A+  ++  +  PG  +LLP P +P YE        E+      
Sbjct: 87  DYAPE-NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT 145

Query: 149 -RHFDLLPDKGWEVDLDDIESLADQ-NTVALVIIN-PGNPCGNVYSYQHLQKLAETANKL 205
              F L P+      L+  +++ +Q + +  VI+N P NP G  YS + ++ LA+   K 
Sbjct: 146 ENDFVLTPEM-----LE--KAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKY 198

Query: 206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265
              VI+DEVY  L +  +P V +  +     IL  G LSK   + GWR+G         +
Sbjct: 199 DIFVISDEVYSELTYTGEPHVSIAEYLPDQTILING-LSKSHAMTGWRIGL--------I 249

Query: 266 FRKPKVVERMKKYFDILGDPATFI--QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI 323
           F   +   ++ K    L   AT +   AAV ++    D+    K   + ++  D    K+
Sbjct: 250 FAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRR--DYIIEKM 307

Query: 324 KEI--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-- 379
            ++    I    KP+G+  +  K+         D   F    A++++V  +PG A G   
Sbjct: 308 TDLGFKII----KPDGAFYIFAKIPAGYNQ---DSFKFLQDFARKKAVAFIPGAAFGPYG 360

Query: 380 KNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409
           + ++R+++A    +++E + R+K + + HA
Sbjct: 361 EGYVRLSYAASMETIKEAMKRLKEYMEEHA 390

Length = 391

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score =  119 bits (301), Expect = 3e-30
 Identities = 103/388 (26%), Positives = 172/388 (44%), Gaps = 46/388 (11%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           + VISL +G+P     F T     EA   +L  + +  Y   AGL   R+ IA+YL +  
Sbjct: 20  EGVISLGVGEPD----FVTPWNVREASIRSL-EQGYTSYTANAGLLELRQEIAKYLKKRF 74

Query: 95  PYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-LSAAFRHIEVRHFD 152
                PND + VT G +QA+DVAM  +  PG  +L+  P F  Y  L      + V    
Sbjct: 75  AVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPV-PVA 133

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
              +  ++V    IE+     T A+++ +P NP G V +   L+++A    K   +V++D
Sbjct: 134 TTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSD 193

Query: 213 EVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           E+Y  L + D+ +       G+   T+ I      SK + + GWRLG+     P      
Sbjct: 194 EIYAELTY-DEAYTSFASIKGMRERTILI---SGFSKGFAMTGWRLGF--IAAP------ 241

Query: 269 PKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEVF-----FKKTLNLLKQSVDICYN 321
               E M K   + ++  P     AA+ ++    D+V      ++K  N    S    +N
Sbjct: 242 VYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTS----FN 297

Query: 322 KIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-- 379
           +I  + C    H P G+         S+    +   +F  +L  EE V ++PG+  G   
Sbjct: 298 EIG-LTC----HVPGGAFYAF----PSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESG 348

Query: 380 KNWLRVTFAVDPYSLEECLDRIKSFYQR 407
           + ++R ++A     L+E + R+K F + 
Sbjct: 349 EGFIRCSYATSLEQLQEAMKRMKRFVEN 376

Length = 378

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score =  117 bits (296), Expect = 2e-29
 Identities = 101/398 (25%), Positives = 177/398 (44%), Gaps = 57/398 (14%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
           N   +ISL +G P     F T     EA   A+  E +  Y   AGL   R+A   ++  
Sbjct: 26  NYDNLISLTIGQPD----FPTPSHVKEAAKRAIT-ENYTSYTHNAGLLELRKAACNFVKD 80

Query: 93  --DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-----LSAAFRH 145
             DL Y    +++ VT G ++AID+A   +  PG  ++LP P +P YE       A    
Sbjct: 81  KYDLHYS-PESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVF 139

Query: 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205
           I+ R        G+ +  + +E+   + T  +V+  P NP G   S + LQ +A+     
Sbjct: 140 IDTR------STGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDK 193

Query: 206 KTLVIADEVYGHLVFGDKPFVPMGVFGS----TVPILTLGSLSKRWIVPGWRLGWFVTTD 261
              V++DE+Y  LV+ ++P   +  F      T+ I     LSK   + GWR+G+     
Sbjct: 194 NIFVLSDEIYSELVY-EQPHTSIAHFPEMREKTIVI---NGLSKSHSMTGWRIGF----- 244

Query: 262 PCGMFRKPKVVERMKKYFDILGDPATFI--QAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319
              +F    + + + K        A+ I   AA+ ++    D+    +  +  K+  D  
Sbjct: 245 ---LFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMR--HQYKKRRDYV 299

Query: 320 YNKIKE--IPCISCPHKPEGSMAV---MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG 374
           YN++    +       KP G+  +   +    +S         DF   L +E  + ++PG
Sbjct: 300 YNRLISMGLDVE----KPTGAFYLFPSIGHFTMS-------SFDFALDLVEEAGLAVVPG 348

Query: 375 TAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           +A     + ++R+++A    +L+E LDR+++F Q+ AK
Sbjct: 349 SAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQKAK 386

Length = 387

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score =  117 bits (294), Expect = 3e-29
 Identities = 104/383 (27%), Positives = 172/383 (44%), Gaps = 39/383 (10%)

Query: 38  ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK 97
           I+L  G P     F       EA  +A+   K N YA   G+P    AIAE   +D    
Sbjct: 57  INLGQGFPN----FDGPDFVKEAAIQAIRDGK-NQYARGFGVPELNSAIAERFKKDTGLV 111

Query: 98  LTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156
           + P  +V VTSGCT+AI   +  L  PG  ++L  P +  YE + +    +++   L P 
Sbjct: 112 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP 171

Query: 157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216
             + V  D++++     T A++I  P NP G +++ + L+ +A    +   L   DEVY 
Sbjct: 172 D-FAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYD 230

Query: 217 HLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272
            L F +   + M    G++  TV   T+ SL K + + GW++GW +          P + 
Sbjct: 231 KLAF-EGDHISMASLPGMYERTV---TMNSLGKTFSLTGWKIGWAIA--------PPHLT 278

Query: 273 ERMKKYFDILG-DPATFIQAAVPSILQQPDEVF--FKKTLNLLKQSVDICYNKIKEIPCI 329
             +++    L    AT +Q A  + L+ P+  +   K+  +  K   DI    +KE+   
Sbjct: 279 WGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKK---DILVEGLKEVGFK 335

Query: 330 SCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-----KNWLR 384
             P    G+  VM+       +   +DI FC  L +E  V  +P +   L     KN +R
Sbjct: 336 VYP--SSGTYFVMVDHTPFGFE---NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVR 390

Query: 385 VTFAVDPYSLEECLDRIKSFYQR 407
             F  D  +L   ++R+K+  +R
Sbjct: 391 FAFCKDEETLRAAVERMKTKLKR 413

Length = 413

>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated

 Score =  115 bits (291), Expect = 2e-28
 Identities = 86/303 (28%), Positives = 148/303 (48%), Gaps = 30/303 (9%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA 118
           E VAE ++ +K  GY PT G+  TR  +AE  ++    ++TP+D+   +G   AI     
Sbjct: 55  EIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG 114

Query: 119 LLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN- 173
           LL R  A ++ P P +  +  +    A +  +    + L P+  W  DLDD+E+    N 
Sbjct: 115 LL-RREARVIGPSPAYSTHSSAEAAHAGYPPV---TYRLDPENNWYPDLDDLENKVKYNP 170

Query: 174 -TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VF 231
               +++INP NP G VY  + L+++ + A +    +I DE+Y ++V+  K  VP+  V 
Sbjct: 171 SIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVI 230

Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGD------- 284
           G  VP + L  +SK    PG R GW         +   K  E  KKY + + +       
Sbjct: 231 GD-VPGIALKGISKELPWPGSRCGWIEV------YNADK-DEVFKKYINSILNAKMIEVC 282

Query: 285 PATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS--MAV 341
             T  Q A+P I+  P+ + + K+     ++  +I Y K+K++P +   ++  G+  M V
Sbjct: 283 STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKV-NRTNGAFYMTV 341

Query: 342 MLK 344
           + +
Sbjct: 342 VFE 344

Length = 433

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score =  112 bits (283), Expect = 9e-28
 Identities = 93/354 (26%), Positives = 158/354 (44%), Gaps = 28/354 (7%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDV 115
           A EA+   L + + + Y    G+P    AI + L +D   +L     + VT+G   A   
Sbjct: 45  AIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104

Query: 116 AMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172
           A+  ++ PG  I+L  P +  +E++   A  + I V       D  +++  + IE     
Sbjct: 105 AILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVP-----TDDNYQLQPEAIEQAITP 159

Query: 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVF 231
            T A+V I+P NP G VY    L+ + +   +     I+DE Y +  +     F P  + 
Sbjct: 160 KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIP 219

Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQ 290
           GS    ++L SLSK +    WR+G+ V   P  +       E +KK  D IL  P    Q
Sbjct: 220 GSGNHTISLYSLSKAYGFASWRIGYMVI--PIHLL------EAIKKIQDTILICPPVVSQ 271

Query: 291 AAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350
            A    LQ     + ++ L  + Q   I    + ++      H   G+    LK+N  L 
Sbjct: 272 YAALGALQVGKS-YCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDL- 329

Query: 351 DDIIDDIDFCFKLAKEESVIILPGTAVGLKN--WLRVTF-AVDPYSLEECLDRI 401
               +D +   +L +E  V ++PGT  G+KN  +LR+ + A+   + +E ++R+
Sbjct: 330 ----NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERL 379

Length = 389

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score =  112 bits (282), Expect = 1e-27
 Identities = 98/396 (24%), Positives = 164/396 (41%), Gaps = 85/396 (21%)

Query: 46  TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105
           T+           EA  + L  +K   Y    G P  + A+A      L   + P ++  
Sbjct: 32  TLEELLALAGKNPEAFYQELGQKKLT-YGWIEGSPEFKEAVAS-----LYQNVKPENILQ 85

Query: 106 TSGCTQAIDVAMALLSRPGANIL----LPRPG------FPIYE--------LSAAFRHIE 147
           T+G T             GAN L    L  PG      +P Y+        L A     E
Sbjct: 86  TNGAT-------------GANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGA-----E 127

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           V ++ L  + GW  DLD++  L   NT  + I N  NP G +    +L+++ E A  +  
Sbjct: 128 VDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDA 187

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL-------GSLSKRWIVPGWRLGWFVTT 260
            V++DEVY  L   D+        GST  I  L        S+SK + +PG R+GW    
Sbjct: 188 YVLSDEVYRPL---DED-------GSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN 237

Query: 261 DPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPS------ILQQPDEVFFKKTLNLLKQ 314
           +        +V++ ++KY D      T I A V         L+  D +  ++   +++ 
Sbjct: 238 E--------EVIDILRKYRDY-----TMICAGVFDDMLASLALEHRDAI-LERNRKIVRT 283

Query: 315 SVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG 374
           ++ I    + + P +S   KP+      +KL++      +   DFC KL KE  V+++PG
Sbjct: 284 NLAILDEWVAKEPRVSYV-KPKAVSTSFVKLDV-----DMPSEDFCLKLLKETGVLLVPG 337

Query: 375 TAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
               L+  +R+ +  D  +L++ L ++  F +    
Sbjct: 338 NRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREFDS 373

Length = 373

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score =  111 bits (279), Expect = 3e-27
 Identities = 83/252 (32%), Positives = 115/252 (45%), Gaps = 17/252 (6%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAM 117
           EA  EA+     N Y P  G+P  R AIA    R    +  P+ +V VT G T+AI  A+
Sbjct: 44  EAAQEAIA-GGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAV 102

Query: 118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVA 176
             L  PG  +LL  P +  Y    A          L+PD +G+ +DLD + +     T A
Sbjct: 103 LGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRA 162

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM----GVFG 232
           L++ +P NP G V +   L  +AE A +   LVI DEVY HLVF     +P+    G+  
Sbjct: 163 LIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRE 222

Query: 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAA 292
            TV   T+ S +K + V GW++GW     P  +      V   K+Y   +G      Q A
Sbjct: 223 RTV---TISSAAKTFNVTGWKIGW--ACGPAPLIA---AVRAAKQYLTYVG--GAPFQPA 272

Query: 293 VPSILQQPDEVF 304
           V   L   D   
Sbjct: 273 VAHALDHEDAWV 284

Length = 387

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score =  109 bits (275), Expect = 7e-27
 Identities = 76/334 (22%), Positives = 144/334 (43%), Gaps = 43/334 (12%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
             EA+  AL  +K N Y P       R A+AEY        + P +V V +G  + I++ 
Sbjct: 40  VIEAIRAAL--DKLNRY-PDPDYRELRAALAEYYG-----VVDPENVLVGNGSDELIELL 91

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
           +     PG  +L+P P F +YE++A     EV    L   K + +DLD I +     T  
Sbjct: 92  VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPL---KEFRLDLDAILAAIRDKTKL 148

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
           + + NP NP G +   + L+ L E A     LV+ DE Y    F  +  + +  +   + 
Sbjct: 149 VFLCNPNNPTGTLLPREELRALLE-ALPEGGLVVIDEAYIE--FSPESSLELLKYPPNL- 204

Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDP---ATFIQAAV 293
            + L + SK + + G R+G+ +          P+++  + K    +  P   ++   AA 
Sbjct: 205 -IVLRTFSKAFGLAGLRVGYAIAN--------PELIAALNK----VRPPFNVSSPALAAA 251

Query: 294 PSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI 353
            + L+  D  + ++++  +++  +  Y  +K +           S A     N  L+   
Sbjct: 252 IAALR--DADYLEESVERIREERERLYAALKALGL----FGVFPSQA-----NFVLVRVP 300

Query: 354 IDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVT 386
             +     +   ++ +++   ++VGL   +LR+T
Sbjct: 301 DAEAAALAEALLKKGILVRDCSSVGLLPGYLRIT 334

Length = 356

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score =  109 bits (273), Expect = 2e-26
 Identities = 100/391 (25%), Positives = 160/391 (40%), Gaps = 53/391 (13%)

Query: 35  KKVISLAMGDPTVHSCFHT-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + ++ L +G+P     F T  H+   AVA     E    Y    G P  R+AI   L R 
Sbjct: 33  RSIVDLTVGEPD----FDTPDHIKQAAVAAIERGE--TKYTLVNGTPALRKAIIAKLERR 86

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP---GFPIYELSAAFRHIEVR- 149
                  N++ V  G  QAI +A+      G  +++P P    +P   L+     + V  
Sbjct: 87  NGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVAC 146

Query: 150 ----HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET-ANK 204
                F L P+         +E+     T  L++  P NP G VYS   L+ LA+     
Sbjct: 147 PEEQGFKLTPEA--------LEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRH 198

Query: 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGWFVT 259
              LV+ D++Y H+ F D    P     +  P     +L    +SK + + GWR+G+   
Sbjct: 199 PHVLVLTDDIYDHIRFDD---EPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG 255

Query: 260 TDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318
                      ++  + K        P++  QAA  + L   D+ F  +++ + KQ  D 
Sbjct: 256 PAD--------LIAAINKLQSQSSSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDY 306

Query: 319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL-------DDIID-DIDFCFKLAKEESVI 370
               +  IP +SC   P+G  A  L +N + L         +++ D D    L     V 
Sbjct: 307 ALALLNAIPGLSC-LVPDG--AFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVA 363

Query: 371 ILPGTAVGLKNWLRVTFAVDPYSLEECLDRI 401
           ++ GTA GL  + R++ A    +LEE   RI
Sbjct: 364 VVQGTAYGLSPYFRLSIATSLETLEEACARI 394

Length = 402

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score =  107 bits (270), Expect = 8e-26
 Identities = 95/380 (25%), Positives = 166/380 (43%), Gaps = 64/380 (16%)

Query: 57  ATEAVAEALL------SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110
              AV EAL           +GY P AG P  R AIAE L+R     LT + + +T G  
Sbjct: 47  PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA 106

Query: 111 QAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEV----RHFDLLPDKGWEVDL 163
            A++VA+  +  PG  +++  P F  Y     +   + + V      F          DL
Sbjct: 107 GALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQP--------DL 158

Query: 164 DDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT------LVIADEVYGH 217
           D +E+     T A++I +P NP G VYS + L+ LA    +          +I+DE Y  
Sbjct: 159 DALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYRE 218

Query: 218 LVFGDK--PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM 275
           +V+     P++    + +++ +    S SK   +PG R+G+        M     +V  +
Sbjct: 219 IVYDGAEVPYIF-KYYDNSIVV---YSFSKSLSLPGERIGYIAV--NPEMEDADDLVAAL 272

Query: 276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI-CYNKIKEIPC------ 328
                ILG    F+ A  P+++Q       +     L  +VD+  Y + +++        
Sbjct: 273 VFANRILG----FVNA--PALMQ-------RVVAKCLDATVDVSIYKRNRDLLYDGLTEL 319

Query: 329 -ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF 387
              C  KP+G+  +  K   S  +   DD+ FC + AK+ +++++PG+  G   + R+++
Sbjct: 320 GFEC-VKPQGAFYLFPK---SPEE---DDVAFC-EKAKKHNLLLVPGSGFGCPGYFRLSY 371

Query: 388 AVDPYSLEECLDRIKSFYQR 407
            VD  ++E  L   +   + 
Sbjct: 372 CVDTETIERSLPAFEKLAKE 391

Length = 394

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score =  105 bits (264), Expect = 4e-25
 Identities = 103/365 (28%), Positives = 174/365 (47%), Gaps = 38/365 (10%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAM 117
            A A+ALL +  N Y P  GLP  R+A+A + +R     L P  +V VTSG T+A+  A+
Sbjct: 46  RAAADALL-DGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAAL 104

Query: 118 ALLSRPGANILLPRPGF----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN 173
             L  PG  ++L +P +    P+   +     + VR    L    W +    + +     
Sbjct: 105 LALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRL-VR----LEPPHWRLPRAALAAAFSPR 159

Query: 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM----G 229
           T A+++ NP NP G V+  + L  LAE   +   + I DEV+ H+VF  +  +P+    G
Sbjct: 160 TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG 219

Query: 230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFI 289
           +   TV I   GS  K + + GW++G FV   P  +    +V+ +  ++      P   +
Sbjct: 220 MRERTVKI---GSAGKIFSLTGWKVG-FVCAAPPLL----RVLAKAHQFLTFTTPP--NL 269

Query: 290 QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI--PCISCPHKPEGSMAVMLKLNL 347
           QAAV   L +PD+ F     + L +S D     ++ I  P +      +G+    L ++L
Sbjct: 270 QAAVAYGLGKPDDYFEGMRAD-LARSRDRLAAGLRRIGFPVLPS----QGTY--FLTVDL 322

Query: 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAV----GLKNWLRVTFAVDPYSLEECLDRIKS 403
           + L    DD+ FC +L +E  V  +P +A      + + +R  FA    +L+E ++R+ +
Sbjct: 323 APLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAA 382

Query: 404 FYQRH 408
             +R 
Sbjct: 383 ARRRR 387

Length = 387

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score =  105 bits (263), Expect = 5e-25
 Identities = 108/401 (26%), Positives = 168/401 (41%), Gaps = 65/401 (16%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSR 92
           K  I+L++G+P         H     V EAL       + Y  T GLP  R+AIA +L R
Sbjct: 28  KPPIALSIGEPK--------HPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLER 79

Query: 93  --DLPYKLTPND-VFVTSGCTQAI-DVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIE 147
             DLP  + P   V   +G  +A+   A A+++      +++P P + IYE +A     E
Sbjct: 80  RFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAE 139

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
               +   + G+  D D +     +    L + +PGNP G V S   L+KL E A++   
Sbjct: 140 PYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGF 199

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPI--------LTLGSLSKRWIVPGWRLGWFVT 259
           ++ +DE Y  L F D+   P G+  +   +        L   SLSKR  +PG R G FV 
Sbjct: 200 IIASDECYSELYF-DEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSG-FVA 257

Query: 260 TDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319
            D        ++++   +Y    G  A  I   + SI    DE   ++   L ++     
Sbjct: 258 GD-------AEILKAFLRYRTYHG-CAMPIPTQLASIAAWNDEQHVRENRALYREK---- 305

Query: 320 YNKIKEI--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV 377
           +  + EI    +     P+    +  K+         DD  F   L +EE+V +LPG  +
Sbjct: 306 FAAVLEILGQVLDLE-LPDAGFYLWPKVP-------GDDEAFARALYEEENVTVLPGRFL 357

Query: 378 GLKNWLRVTFAVDP----------YSLEEC---LDRIKSFY 405
                 R    V+P            LEEC    +RI+SF 
Sbjct: 358 A-----REAEGVNPGEGRVRIALVAPLEECVEAAERIRSFI 393

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score =  101 bits (253), Expect = 6e-24
 Identities = 83/338 (24%), Positives = 149/338 (44%), Gaps = 51/338 (15%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
           A EA+      +K + Y P       ++A+A+Y      Y + P  + + +G  + I++ 
Sbjct: 37  AKEALRAEA--DKLHRY-PDPDPAELKQALADY------YGVDPEQILLGNGSDEIIELL 87

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
           +     PG  +L+P P + +YE+SA     EV    L  D   ++DL+DI    D     
Sbjct: 88  IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKL 145

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
           + + +P NP GN+ S   ++ + E   +   LV+ DE YG   F  +P        ST+P
Sbjct: 146 VFLCSPNNPTGNLLSRSDIEAVLERTPE-DALVVVDEAYGE--FSGEP--------STLP 194

Query: 237 -------ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFI 289
                  ++ L +LSK + + G R+G+ +           ++++ + K            
Sbjct: 195 LLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN--------AEIIDALNKVRAPFNLSRLAQ 246

Query: 290 QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349
            AA+ + L+  D  F +KT+  +    +  Y+ +K++P +     P  S A     N  +
Sbjct: 247 AAAIAA-LRDDD--FIEKTVEEINAERERLYDGLKKLPGLEV--YP--SDA-----NF-V 293

Query: 350 LDDIIDDIDFCFKLAKEESVIILPGTAV-GLKNWLRVT 386
           L     D D  F+   E+ +I+    +  GL N LR+T
Sbjct: 294 LIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRIT 331

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score =  100 bits (252), Expect = 2e-23
 Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 17/228 (7%)

Query: 58  TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117
             A+AEA      + Y P  GLP  R A A + SR     ++P  V +TSGC QA   AM
Sbjct: 48  LRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAM 107

Query: 118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177
             L+  G  ++LP P +  +++      I   +       G   D    E+L    T A+
Sbjct: 108 VTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAI 167

Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-----G 232
            ++ P NP G VY  + L +L + A +    +I DE Y    F      P  +F      
Sbjct: 168 ALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRD--FDSGGGAPHDLFADPDWD 225

Query: 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD 280
            T+  + L S SK + + G R+G  V +        P  +  ++K+ D
Sbjct: 226 DTL--VHLYSFSKSYALTGHRVGAVVAS--------PARIAEIEKFMD 263

Length = 386

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score = 99.8 bits (249), Expect = 4e-23
 Identities = 104/402 (25%), Positives = 169/402 (42%), Gaps = 52/402 (12%)

Query: 24  LMQSVDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAG 78
           L   +D +K EKK     VISL +GDP + +  H      EA+ +A  + + + Y    G
Sbjct: 13  LFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIV----EALCKAAENPENHRYPSYEG 68

Query: 79  LPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY 137
           +   R+A+A++  R    +L P  +V    G  + I         PG  +L+P PG+P+Y
Sbjct: 69  MLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVY 128

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA---LVIIN-PGNPCGNVYSYQ 193
            +   F   E     L  + G+  D D I     ++      L+ IN P NP G V   +
Sbjct: 129 RIGTLFAGGEPYEMPLKEENGFLPDFDAI----PEDIAKKAKLMFINYPNNPTGAVAPLK 184

Query: 194 HLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252
             ++L E A +   +V  D  Y  + F G K    + V G+    +   SLSK + + GW
Sbjct: 185 FFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW 244

Query: 253 RLGWFVTTDPCGMFRKPKVVERMKKYFDILG------DPATF--IQAAVPSILQQPDEVF 304
           R+G  V                       LG      D   F  IQ A  + L  P +V 
Sbjct: 245 RIGMAVGN---------------ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDV- 288

Query: 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLA 364
            K+   + ++  D+    +K+I  I    KP+ +  V +      + +     +F  +L 
Sbjct: 289 VKEIRKIYQRRRDLLLEALKKIG-IDV-EKPKATFYVWVP-----VPEGYTSAEFAARLL 341

Query: 365 KEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF 404
           +E  V++ PG   G   + ++R++  V    LEE + RIK  
Sbjct: 342 EETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKKL 383

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 99.4 bits (248), Expect = 5e-23
 Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 22/229 (9%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           VI L +G+P     F T      A   AL +     Y    GLP  R AIA + ++    
Sbjct: 34  VIHLEIGEPD----FTTAEPIVAAGQAALAAGHTR-YTAARGLPALREAIAGFYAQRYGV 88

Query: 97  KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD---- 152
            + P  + VT G + A+ +A +LL  PG + LL  PG+P        RH  +R  +    
Sbjct: 89  DVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCN------RHF-LRLVEGAAQ 141

Query: 153 ---LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
              + PD  +++    +E   + +TV  ++ +P NP G + S   L  L++        +
Sbjct: 142 LVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHL 201

Query: 210 IADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           + DE+Y  L +G      + V         L S SK + + GWRLGW V
Sbjct: 202 VVDEIYHGLTYGVDAASVLEVDDD---AFVLNSFSKYFGMTGWRLGWLV 247

Length = 387

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 94.7 bits (236), Expect = 2e-21
 Identities = 86/357 (24%), Positives = 159/357 (44%), Gaps = 29/357 (8%)

Query: 58  TEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
            EA+ E +    F GY   +  L     AIA +  +   +++ P  +    G    I +A
Sbjct: 44  IEALRERVDHGVF-GYPYGSDELY---AAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLA 99

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF----DLLPDKGWEVDLDDIE-SLAD 171
           +  L++PG  +++  P   +Y        +  R       +  D  +E+D D +E +  D
Sbjct: 100 IRALTKPGDGVVIQTP---VYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD 156

Query: 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231
           +     ++ NP NP G V++ + L+K+AE   +    VI+DE++  LV G    +P    
Sbjct: 157 ERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASL 216

Query: 232 GSTVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFI 289
                   +TL S SK + + G +  + + ++     R  K ++R+K+  + L  P+   
Sbjct: 217 SERFADNSITLTSASKTFNLAGLKCAYIIISNR--ELRA-KFLKRLKR--NGLHGPSALG 271

Query: 290 QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI-KEIPCISCPHKPEGSMAVMLKLNLS 348
             A  +   Q  E +  + L  LK + D   + + K +P +    +P+G+   +  L+  
Sbjct: 272 IIATEAAYNQ-GEPWLDELLEYLKDNRDYVADFLNKHLPGVKV-TEPQGTY--LAWLDCR 327

Query: 349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKS 403
            L   +DD +    L +E  V + PG+  G     ++R+ FA     LEE L+R+K 
Sbjct: 328 ELG--LDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKR 382

Length = 388

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 93.6 bits (233), Expect = 5e-21
 Identities = 93/396 (23%), Positives = 159/396 (40%), Gaps = 62/396 (15%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
             E K + L +G+P     F T     +A+     +   N Y  +AG    R A   +  
Sbjct: 21  NKEYKGLDLTIGEPQ----FETPKFIQDALKNN--AHLLNKYPKSAGEESLREAQRGFFK 74

Query: 92  RDLPYKLTPNDVFVTSGCTQAID--VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149
           R    +L  N++  T G  + +       L  +    I  P P + IYE +A     +V 
Sbjct: 75  RRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVL 134

Query: 150 HFDLLPDKGWEVDLDDIE-SLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKT 207
              L  +  +   L++ E    D     LVI+N P NP G   S + L +  + A K   
Sbjct: 135 LMPLTKENDFTPSLNEKELQEVD-----LVILNSPNNPTGRTLSLEELIEWVKLALKHDF 189

Query: 208 LVIADEVYGHLVFGDKP------FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
           ++I DE Y  +     P       + +G   S   +L + S+SKR   PG R G F+  D
Sbjct: 190 ILINDECYSEIYENTPPPSLLEASILVGN-ESFKNVLVINSISKRSSAPGLRSG-FIAGD 247

Query: 262 PCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFK------KTLNLLKQS 315
                    ++++ K Y        T++  A P  LQ+   V +          N+  ++
Sbjct: 248 A-------SILKKYKAY-------RTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKN 293

Query: 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT 375
           + +   +I  I        P  +  V L ++        +D +F  KL + E + +LPG+
Sbjct: 294 LKLA-REILGIT------IPPATFYVWLPVD--------NDEEFTKKLYQNEGIKVLPGS 338

Query: 376 AVGL----KNWLRVTFAVDPYSLEECLDRIKSFYQR 407
            +G     K ++R+    D   LE+ L+ IK++ + 
Sbjct: 339 FLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLEN 374

Length = 374

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score = 90.6 bits (225), Expect = 5e-20
 Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 28/334 (8%)

Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSGCTQAIDVAMALLSRPGANILLPR 131
           P+ G    R AIA+        +    D   V  T G ++AI + +  L RPG  +++  
Sbjct: 49  PSLGGEGLRAAIAD--------RWRGGDAHVVMTTHGSSEAIYLVLTALLRPGDEVVVVD 100

Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           P +      A     EVR + LL  +G+  DLD + +L    T A+V+  P NP G   +
Sbjct: 101 PAYHSLSHLAVATGCEVRPWPLLAVRGFRPDLDALRALLTPRTRAVVVNFPHNPTGASVT 160

Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251
            + L +L E A +   +++ D  +  LV    P          V  ++ G+LSK + +PG
Sbjct: 161 PRELDELLERAARSGAVLLWDNAFADLVHDAPPLPDPSALYDRV--ISFGTLSKAFGLPG 218

Query: 252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNL 311
            R+GW V   P  +    ++V R++ Y  +   P   + A V   ++  D       L  
Sbjct: 219 LRVGWCVG--PADLL--AELV-RLRDYTTLSLSPLVELLAEV--AVEHADA-LIGPRLAE 270

Query: 312 LKQSVDICYNKIKEIP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVI 370
            + +     +     P  + C   PEG +A   +       D+ D    C +L     V+
Sbjct: 271 ARANRRRLLDWAAAHPDVVRCT-PPEGGVAAFPR--FPGHADVTD---LCRRLLARHGVL 324

Query: 371 ILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404
           ++PG+  G  + +R+ F      L   L R+ +F
Sbjct: 325 LVPGSCFGAADRMRLGFGGSSAELRAGLARLSAF 358

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|177996 PLN02368, PLN02368, alanine transaminase

 Score = 89.5 bits (222), Expect = 2e-19
 Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 24/277 (8%)

Query: 42  MGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN 101
           + DP V   F    +A      +L S     Y+ + GLP  R+ +AE++ R   Y   P 
Sbjct: 72  LDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPE 131

Query: 102 DVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGW 159
            +F+T G ++ +  +  A++      +L+P P +P+Y  + +      V ++ L   + W
Sbjct: 132 LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYY-LEESENW 190

Query: 160 EVDLDDIESLADQN-----TV-ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
            +D++++     Q      TV A+VIINPGNP G   S  +L+++ +   + + +++ DE
Sbjct: 191 GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDE 250

Query: 214 VYGHLVFGD-KPFVP-------MGV-FGSTVPILTLGSLSK-RWIVPGWRLGWFVTTDPC 263
           VY   ++ D +PF+        MG      V +++  ++SK  W   G R G+F  T+  
Sbjct: 251 VYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTN-- 308

Query: 264 GMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP 300
                PK VE + K   I   P    Q  +  ++  P
Sbjct: 309 ---IPPKTVEEIYKVASIALSPNVSGQIFMGLMVNPP 342

Length = 407

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score = 87.4 bits (217), Expect = 6e-19
 Identities = 89/396 (22%), Positives = 151/396 (38%), Gaps = 61/396 (15%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E+  + +I + +G+P     F       EA A   L      Y    GL   R AIA + 
Sbjct: 26  ERAGRDIIHMGIGEPD----FTAPEPVVEA-AARALRRGVTQYTSALGLAPLREAIAAWY 80

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
           +R     + P  + VT+G + A+ +A   L   G  +L+P P +P        RH  V  
Sbjct: 81  ARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYP------CNRHF-VAA 133

Query: 151 FD----LLP---DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
            +    L+P    + +++   D+E+   + T  +++ +P NP G   +   L+++ E   
Sbjct: 134 AEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVR 193

Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263
                 I DE+Y  L +   P V     G  V  +T+ S SK + + GWRLGW V   P 
Sbjct: 194 ARGGFTIVDEIYQGLSYDAAP-VSALSLGDDV--ITINSFSKYFNMTGWRLGWLVV--PE 248

Query: 264 GMFRKPKVVERMKKYFDILGDPATFIQAAV-----PSILQQPDEV---------FFKKTL 309
            +       E++ +   I    +   Q A      P  L   +           F    L
Sbjct: 249 ALV---GTFEKLAQNLFIC--ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPAL 303

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
             L   V               P  P+G+  V             D       +  +  V
Sbjct: 304 ESLGFKV---------------PVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGV 348

Query: 370 IILPGTAVGL---KNWLRVTFAVDPYSLEECLDRIK 402
           +++PG   G    ++++R+++A     LEE + R+ 
Sbjct: 349 VLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLG 384

Length = 388

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 86.3 bits (214), Expect = 1e-18
 Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 32/214 (14%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID-V 115
           A EA+ EA  +E+ + Y   +   LT   +A+         ++P  V++ +G   A+D +
Sbjct: 48  AVEAIREA--AERVHSYPKASHADLTAA-LADRWD------VSPEQVWLANGGDGALDYL 98

Query: 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI-ESLADQNT 174
           A A+L  PG  +L+P PGF  Y +SA + H EVR + +     +E   D + ++   +  
Sbjct: 99  ARAMLD-PGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYDGERI 157

Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234
           V L   +P NP G+      ++ LAE  ++ +TLV+ DE YG   F ++P        S 
Sbjct: 158 VYLT--SPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGE--FAERP--------SA 204

Query: 235 VPIL-------TLGSLSKRWIVPGWRLGWFVTTD 261
           V ++        L + SK + + G RLG+ V  +
Sbjct: 205 VALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE 238

Length = 357

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 85.5 bits (212), Expect = 3e-18
 Identities = 79/347 (22%), Positives = 138/347 (39%), Gaps = 24/347 (6%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +I  +MG+P   +  H      E + E       +GY+ + G+P  RRAI+ +       
Sbjct: 31  IIDFSMGNPDGPTPPHIV----EKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDV 86

Query: 97  KLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP 155
            + P  +  VT G  + +   M      G  +L+P P +PI+   A     +VR   L+ 
Sbjct: 87  DIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVE 146

Query: 156 DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
              +  +L+     +      +++  P NP       +  +K+   A +   LV+ D  Y
Sbjct: 147 GVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAY 206

Query: 216 GHLVFGDKPFVP--MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
             +V+ D    P  M V G+    +   +LSK + + GWR+G+       G       + 
Sbjct: 207 ADIVY-DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFM-----VGNPELVSALA 260

Query: 274 RMKKYFDILGDPATF--IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC 331
           R+K Y D      TF  +Q A  + L+   +   +      K+  D+    + E   +  
Sbjct: 261 RIKSYHDY----GTFTPLQVAAIAALEGDQQC-VRDIAEQYKRRRDVLVKGLHEAGWMV- 314

Query: 332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG 378
              P+ SM V  K+        +  ++F  KL  E  V + PG   G
Sbjct: 315 -EMPKASMYVWAKIPEPYAA--MGSLEFAKKLLNEAKVCVSPGIGFG 358

Length = 395

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 84.2 bits (209), Expect = 7e-18
 Identities = 95/392 (24%), Positives = 171/392 (43%), Gaps = 42/392 (10%)

Query: 28  VDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
           +D +K EK      VISL +GDP +     T     EA+ +A+   + + Y    G+   
Sbjct: 19  IDKKKAEKIARGVDVISLGIGDPDLP----TPDHIIEAMCKAVEDPENHQYPSYEGMLEF 74

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTS-GCTQAI-DVAMALLSRPGANILLPRPGFPIYELS 140
           R+A+A++  R    +L P    ++  G  + I  + +A ++ PG  +L+P PG+P+Y++ 
Sbjct: 75  RKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVN-PGDVVLVPDPGYPVYKIG 133

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA---LVIIN-PGNPCGNVYSYQHLQ 196
             F   E     L  + G+  DLD I     ++      L+ IN P NP G V   +  +
Sbjct: 134 TIFAGGEPYFMPLKEENGFLPDLDAI----PEDVAKKAKLMFINYPNNPTGAVADLEFFE 189

Query: 197 KLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
           ++ + A K   +V  D  Y  + + G KP   + V G+    +   SLSK + + GWR+G
Sbjct: 190 EVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIG 249

Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATF--IQAAVPSILQQPDEVFFKKTLNLLK 313
           + V            ++  + K    + D   F  IQ A  + L  P E   ++   + +
Sbjct: 250 FAVG--------NADLIAGLGKVKSNV-DSGVFQAIQEAGIAALNGPQE-VVEELRKIYQ 299

Query: 314 QSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP 373
           +  DI    ++++  +     P+ +  V   +            +F   L  +  V++ P
Sbjct: 300 ERRDILVEGLRKLG-LEVE-PPKATFYVWAPVPKGY-----TSAEFATLLLDKAGVVVTP 352

Query: 374 GTAVGL--KNWLRVTFAVDPYSLEECLDRIKS 403
           G   G   + + R+   V    +EE ++RIK 
Sbjct: 353 GNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384

Length = 385

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 82.2 bits (204), Expect = 3e-17
 Identities = 107/419 (25%), Positives = 163/419 (38%), Gaps = 95/419 (22%)

Query: 34  EKKVISLAMGDPTVHSCFHTT-HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
           +   ISL++G+P      H T     +A+A  L  +    Y  TAGLP  R AIA +L R
Sbjct: 28  DLPPISLSIGEPK-----HPTPAFIKDALAANL--DGLASYPTTAGLPALREAIAAWLER 80

Query: 93  --DLPYKLTP-NDVFVTSGCTQAI-DVAMALL--SRPGANILLPRPGFPIYELSAAFRHI 146
              LP  L P   V   +G  +A+   A  ++    PG  ++ P P + IYE +A     
Sbjct: 81  RYGLP-ALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGA 139

Query: 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206
           E    +  P   +  D D + +     T  L + +PGNP G V      +KL   +++  
Sbjct: 140 EPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYG 199

Query: 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG-----------SLSKRWIVPGWRLG 255
            ++ +DE Y  + F D+   P+G+  +      LG           SLSKR  VPG R G
Sbjct: 200 FVIASDECYSEIYF-DEAAPPLGLLEAAA---ELGRDDFKRLVVFHSLSKRSNVPGLRSG 255

Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDILG---DPATFIQAAVPSILQQPDEVF-------- 304
            FV  D         ++++   Y    G    PA   QAA  SI    DE          
Sbjct: 256 -FVAGD-------AALLKKFLLYRTYHGCAMPPAV--QAA--SIAAWNDEAHVRENRALY 303

Query: 305 ---FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCF 361
              F     +L   +D+                P+    +  K+         DD +F  
Sbjct: 304 REKFDAVTPILAPVLDV--------------QLPDAGFYLWAKVP-------GDDTEFAR 342

Query: 362 KLAKEESVIILPGTAVGLKNWLRVTFAVDP----------YSLEECLD---RIKSFYQR 407
           +L  + +V +LPG+ +      R    V+P            L EC++   RI  F + 
Sbjct: 343 RLYADYNVTVLPGSYLA-----REAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCRS 396

Length = 396

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 80.5 bits (199), Expect = 1e-16
 Identities = 66/232 (28%), Positives = 95/232 (40%), Gaps = 27/232 (11%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           ++ L++G P          +   A+A A  +    GY  T G P  R AI ++L R    
Sbjct: 23  IVDLSVGTPVDP----VPPLIRAALAAAADAP---GYPQTWGTPELREAIVDWLERRRGV 75

Query: 97  K-LTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
             L P  V    G  + +     LL   PG  +++P   +P YE+ A             
Sbjct: 76  PGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATP------ 129

Query: 155 PDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
                 V  DD   L D     L+ +N PGNP G V S   L+ +   A +   +V +DE
Sbjct: 130 ------VAADDPTEL-DPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDE 182

Query: 214 VYGHLVFGDKPFV---PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
            Y  L +  +P     P    G    +L + SLSKR  + G+R G FV  DP
Sbjct: 183 CYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAG-FVAGDP 233

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 79.6 bits (197), Expect = 2e-16
 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 9/189 (4%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           E   I+L+ G P     F       EA+A A+ +   N Y P  G+   R AIA   +R 
Sbjct: 29  EHGAINLSQGFPD----FDGPPYLVEALAYAM-AAGHNQYPPMTGVAALREAIAAKTARL 83

Query: 94  LPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
              +   + ++ VT+G T+A+  A+  L RPG  +++  P +  Y  +            
Sbjct: 84  YGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVA 143

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
           L P   + VD     +     T  L+I+N P NP G V+S   ++ L +        V++
Sbjct: 144 LQPP-DFRVDWQRFAAAISPRT-RLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLS 201

Query: 212 DEVYGHLVF 220
           DEVY H+VF
Sbjct: 202 DEVYEHIVF 210

Length = 386

>gnl|CDD|177876 PLN02231, PLN02231, alanine transaminase

 Score = 78.8 bits (194), Expect = 7e-16
 Identities = 88/374 (23%), Positives = 162/374 (43%), Gaps = 51/374 (13%)

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLPR 131
           Y+ + G+   R AIA  +     +   PND+F+T G + A+ + M LL R   + IL P 
Sbjct: 164 YSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPI 223

Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE-SLADQNTV-----ALVIINPGNP 185
           P +P+Y  S A     +  + L    GW +++ +++  L D  +      ALV+INPGNP
Sbjct: 224 PQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNP 283

Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPF-------VPMGVFGSTVPI 237
            G V + ++ + + E   +   +++ADEVY   V+  DK F         MG     + +
Sbjct: 284 TGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISL 343

Query: 238 LTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYF------DILGDPATFIQ 290
           ++  S+SK +    G R G+   T   G      V E++ K        +I G     + 
Sbjct: 344 VSFQSVSKGYYGECGKRGGYMEVT---GF--TSDVREQIYKVASVNLCSNISGQILASLV 398

Query: 291 AAVPSILQQPDEVFFKKTLNLLK------QSVDICYNKIKEIPCISCPHKPEGSMAVMLK 344
            + P    +  E +  +   +L       ++++   N ++ + C    +K EG+M +  +
Sbjct: 399 MSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTC----NKAEGAMYLFPR 454

Query: 345 LNLSLLDDIID---------DIDFCFKLAKEESVIILPGTAVGL--KNW-LRVTFAVDPY 392
           ++L      I          D  +C +L     ++++PG+  G     W  R T      
Sbjct: 455 IHLP--QKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQED 512

Query: 393 SLEECLDRIKSFYQ 406
            +   + R+  F++
Sbjct: 513 KIPAIVSRLTEFHK 526

Length = 534

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 77.8 bits (192), Expect = 1e-15
 Identities = 94/397 (23%), Positives = 162/397 (40%), Gaps = 50/397 (12%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +I L MG+P + +  H      + + E     + + Y+ + G+P  RRA A Y +R    
Sbjct: 32  IIDLGMGNPDLPTPQHIV----DKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGV 87

Query: 97  KLTPN-DVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHI----EVRH 150
           KL P+  V  T G  +   ++A A+ + PG  IL P P +PI+    AF  I     +R 
Sbjct: 88  KLNPDTQVVATLGSKEGFANMAQAITA-PGDVILCPNPSYPIH----AFGFIMAGGVIRS 142

Query: 151 FDLLPDKGWEVDLDDIESLADQNTV----ALVIINPGNPCGNVYSYQHLQKLAETANKLK 206
               PD+ +      +E  A ++++    AL++  P NP   V      + +   A K  
Sbjct: 143 VPAEPDEEF---FPALER-AVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHD 198

Query: 207 TLVIADEVYGHLVFGDKPFVP---MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263
            ++++D  Y  + F   P  P   + V G+    +   S+SK + + GWR+G+ V     
Sbjct: 199 IIILSDLAYSEIYFDGNP--PPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV----- 251

Query: 264 GMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI 323
           G  R    + R+K Y D      T IQ A  + L  P +    +   L K+  D+     
Sbjct: 252 GNERLIAALTRVKSYLDY--GAFTPIQVAATAALNGPQDC-IAEMRELYKKRRDVLVESF 308

Query: 324 K----EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL 379
                +IP       P  SM     +  +     +  ++F   L ++  V + PG   G 
Sbjct: 309 GRAGWDIP------PPAASMFAWAPIPEAFRH--LGSLEFSKLLVEKADVAVAPGVGFGE 360

Query: 380 K--NWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQR 414
               ++R+    +   + +    IK F     + L  
Sbjct: 361 HGDGYVRIALVENEQRIRQAARNIKRFLSSADETLHN 397

Length = 405

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score = 77.5 bits (191), Expect = 1e-15
 Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 21/238 (8%)

Query: 42  MGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN 101
           MG  T H          EA+   +   ++  Y P  G P  R  I + L       L  +
Sbjct: 33  MGQNTNH--LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDD 84

Query: 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWE 160
           +  +T+G T+++ + M     PG N + P PG+ I +  A+    EV    +   +  ++
Sbjct: 85  EALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYK 144

Query: 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220
           +  + ++   D+NT  + +I+P NP G+ Y+ + +++ AE A      ++ D  Y     
Sbjct: 145 LTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR 204

Query: 221 GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
                       +    +T  S SK + + G R+G  V T        P ++E +K  
Sbjct: 205 EHTLAAEYAPEHT----VTSYSFSKIFGMAGLRIGAVVAT--------PDLIEVVKSI 250

Length = 380

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 76.0 bits (187), Expect = 4e-15
 Identities = 98/419 (23%), Positives = 173/419 (41%), Gaps = 78/419 (18%)

Query: 13  SIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG 72
           +I T+ G L+           +   ++L+ G P     F       E VA A+  +  N 
Sbjct: 17  TIFTVIGQLA----------AQHDALNLSQGAPN----FAPDPALVEGVARAM-RDGHNQ 61

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           YAP AG+   R A+AE   R    +  P  +V V +  ++ +  A++ L  PG  ++   
Sbjct: 62  YAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFE 121

Query: 132 PGF----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
           P F    PI  L  A   + ++    L  + + V+ D++ +     T  +++  P NP  
Sbjct: 122 PSFDSYAPIVRLQGA-TPVAIK----LSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSA 176

Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT-----LGS 242
            V+S   L +LA+       ++++DEVY H+VF       M    +    L      + S
Sbjct: 177 TVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSM----ARHRELAERSVIVSS 232

Query: 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER---------MKKYF-DILGDPATFIQAA 292
             K + V GWR+G+ +   P  +  + + V +         M+  F + L +PA+++   
Sbjct: 233 FGKSYHVTGWRVGYCLA--PAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLG 290

Query: 293 VPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352
                      F+++  +LL +       ++        P   EGS   ML       D+
Sbjct: 291 ----------AFYQRKRDLLAR-------ELAGSRFELLP--SEGSF-FMLARFRHFSDE 330

Query: 353 IIDDIDFCFKLAKEESVIILP-------GTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404
              D DF  +L ++  V  +P       GT  GL   +R++F+ D  +L E   R+ S 
Sbjct: 331 --SDSDFVLRLIRDARVATIPLSAFYTDGTDTGL---IRLSFSKDDATLVEGARRLCSL 384

Length = 384

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 75.3 bits (186), Expect = 6e-15
 Identities = 61/201 (30%), Positives = 85/201 (42%), Gaps = 28/201 (13%)

Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPY-KLTPNDVFVTSGCTQAIDVAMALLSR-----PGA 125
           GY  TAG P  R AI  +L+R      L P  V    G  + +    A L       PG 
Sbjct: 57  GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELV----AWLPTLLGLGPGD 112

Query: 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGN 184
            +++P   +P YE+ A      V            V  D +  L  Q   AL+ +N P N
Sbjct: 113 VVVIPELAYPTYEVGARLAGATV------------VRADSLTELGPQR-PALIWLNSPSN 159

Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV---PMGVFGSTVPILTLG 241
           P G V    HL+K+   A +   +V +DE Y  L +  +P     P    G    +L + 
Sbjct: 160 PTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVH 219

Query: 242 SLSKRWIVPGWRLGWFVTTDP 262
           SLSK+  + G+R G FV  DP
Sbjct: 220 SLSKQSNLAGYRAG-FVAGDP 239

Length = 364

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 73.6 bits (181), Expect = 3e-14
 Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 23/238 (9%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
              +I L +GD T             AV E    E F GY P  G P  R AIAE    D
Sbjct: 32  SADIIRLGIGDTTQPLPASVIEAFHNAVDELASPETFRGYGPEQGYPFLREAIAE---ND 88

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMAL-LSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
              ++ P ++F++ G     DV     L  P   + +  P +P Y  S     +  R   
Sbjct: 89  YRGRIDPEEIFISDG--AKCDVFRLQSLFGPDNTVAVQDPVYPAYLDSN---VMAGRAGV 143

Query: 153 LLPDKGWE--------VDLDDIESLADQNTVALV-IINPGNPCGNVYSYQHLQKLAETAN 203
           L  D  +          + + I  L ++  + ++ + +P NP G V + + L++L + AN
Sbjct: 144 LDDDGRYSKITYLPCTAENNFIPELPEEPHIDIIYLCSPNNPTGTVLTKEQLKELVDYAN 203

Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFV 258
           +  +L++ D  Y    F   P +P  +F   G+    +   S SK     G RLGW V
Sbjct: 204 EHGSLILFDAAYS--AFISDPSLPHSIFEIPGARFCAIEFRSFSKTAGFTGVRLGWTV 259

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 73.1 bits (180), Expect = 4e-14
 Identities = 43/182 (23%), Positives = 89/182 (48%), Gaps = 5/182 (2%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           A+  +L++   +++ P  +    G   ++  A+  L+ PG  +++  P +P + LSA   
Sbjct: 68  AVINWLAQRHGWQIDPEWIVFLPGVVPSLFAAVRALTAPGEGVIVQTPVYPPF-LSAVKS 126

Query: 145 -HIEVRHFDLLPDKG-WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
              E+    L  D G +  DL+D+E    +    L++ +P NP G V++ + L +LAE  
Sbjct: 127 NGRELVLNPLKLDPGRYRFDLEDLEDAITEKARLLLLCSPHNPVGRVWTREELTRLAELC 186

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            +   +V++DE++  LV+     +P+      +    +TL S  K + + G  + + +  
Sbjct: 187 LRHNVVVVSDEIHADLVYPPNKHIPLASLSPEIAERTVTLLSPGKTFNIAGLNISFAIIP 246

Query: 261 DP 262
           +P
Sbjct: 247 NP 248

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 72.6 bits (178), Expect = 5e-14
 Identities = 78/335 (23%), Positives = 137/335 (40%), Gaps = 26/335 (7%)

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI---DVAMALLSRPGANIL 128
           Y    G    R AI+ +  R    KL P+  V  ++G  +AI    +           ++
Sbjct: 32  YPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVI 91

Query: 129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188
              PG+P+YE  A F   E     L  + G+ + L+ +E    + T  + I  P NP G 
Sbjct: 92  FGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGA 151

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248
                +L++      +   ++ +DE Y  + FG+ P   + V      +L   SLSKR  
Sbjct: 152 TAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSG 209

Query: 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQAAVPSILQQPDEVFFKK 307
           + G+R G FV  D        K++  ++K     G     F+QAA  +     D+    +
Sbjct: 210 MTGYRSG-FVAGD-------EKLISFLRKLRANFGVASPDFVQAAAKAAWS--DDNHVLE 259

Query: 308 TLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE 367
              + K+  D+      ++        P+ +  + +K     +   ID  D+  +L  E 
Sbjct: 260 RRKIFKRKRDLFIEFFNKVGLEYLY--PDATFYLWVK-----VPSGIDAKDYALRLL-EN 311

Query: 368 SVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIK 402
            +++ PG   G      V  A+ P +LEEC + ++
Sbjct: 312 GIVVAPGENFGSGEEGYVRVALVP-TLEECEEALR 345

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 72.4 bits (178), Expect = 6e-14
 Identities = 87/378 (23%), Positives = 160/378 (42%), Gaps = 39/378 (10%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +I L MG+P             EA   AL   + +GY P  G    R+AI ++  R    
Sbjct: 37  LIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGV 92

Query: 97  KLTPN-DVFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
           +L P+ +     G  + +  +A+A ++ PG  +L+P P +P +         ++    L 
Sbjct: 93  ELDPDSEALPLLGSKEGLTHLALAYVN-PGDVVLVPSPAYPAHFRGPLIAGAQIYPIILK 151

Query: 155 PDKGWEVDLDDI-ESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           P+  W +DL  I E +A Q  + L    P NP       +  +++   A K + +++ D 
Sbjct: 152 PENDWLIDLSSIPEEVAQQAKI-LYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDL 210

Query: 214 VYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272
            Y  L F G +P   + + G+    +   +LSK + + GWR+G+ V            ++
Sbjct: 211 CYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN--------RHII 262

Query: 273 ERMKKYFDILGDPATF--IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----I 326
           + ++     L D   F  +Q A  + LQ PD  + ++     +   D     + E    I
Sbjct: 263 QGLRTLKTNL-DYGIFSALQKAAETALQLPDS-YLQQVQERYRTRRDFLIQGLGELGWNI 320

Query: 327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLR 384
           P        + +M + +   + +        DF   + ++  V++ PG A G   + ++R
Sbjct: 321 P------PTKATMYLWVPCPVGM-----GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVR 369

Query: 385 VTFAVDPYSLEECLDRIK 402
           ++   D   L E LDR+K
Sbjct: 370 ISLIADCDRLGEALDRLK 387

Length = 394

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score = 71.5 bits (176), Expect = 8e-14
 Identities = 52/196 (26%), Positives = 74/196 (37%), Gaps = 38/196 (19%)

Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
           P       R A A Y      Y L    V   +G  +AI   +  L  PG  +L+  P +
Sbjct: 45  PDPEYDELRAAAAAY------YGLPAASVLPVNGAQEAI-YLLPRLLAPGR-VLVLAPTY 96

Query: 135 PIYELSAAFRHIEVRHFDLLPDKGWEV----DLDDIESLADQNTVALVIINPGNPCGNVY 190
             Y    A+R             G EV    DLD + +  ++  + LV+ NP NP G + 
Sbjct: 97  SEYA--RAWR----AA-------GHEVVELPDLDRLPAALEEADL-LVVCNPNNPTGRLI 142

Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----ILTLGSLSKR 246
             + L  LA         ++ DE      F D  F P             ++ L SL+K 
Sbjct: 143 PPETLLALAARLRARGGWLVVDE-----AFID--FTPDASLAPQAARFPGLVVLRSLTKF 195

Query: 247 WIVPGWRLGWFVTTDP 262
           + + G RLG FV   P
Sbjct: 196 FGLAGLRLG-FVVAHP 210

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 70.2 bits (172), Expect = 4e-13
 Identities = 79/353 (22%), Positives = 147/353 (41%), Gaps = 30/353 (8%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA-IDVA 116
           E +      ++  GY  + G+     A+ EY +      L  + +V +  G     + + 
Sbjct: 52  EEMVHTANQKESYGYTLS-GIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLP 110

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI-ESLADQNTV 175
           M   + PG  IL+P PG+  YE           +  L  +  +  DL+ I E +AD+   
Sbjct: 111 MVYAN-PGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADK--A 167

Query: 176 ALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGS 233
            ++I+N PGNP   +      +++   A K   +V+ D  Y    F G+KP   + V G+
Sbjct: 168 KMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGA 227

Query: 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATF--IQA 291
               + + SLSK + + G R+G+        M    ++V  + ++     D   F  IQ 
Sbjct: 228 KEVGVEINSLSKSYSLAGSRIGY--------MIGNEEIVRALTQFKSNT-DYGVFLPIQK 278

Query: 292 AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD 351
           A  + L+     F +K   + ++  D   +  +         KP GSM V  +     + 
Sbjct: 279 AACAALRNGAA-FCEKNRGIYQERRDTLVDGFRTFGWNV--DKPAGSMFVWAE-----IP 330

Query: 352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIK 402
                + F + L    +V++ PG A G   + ++R+    D   L++ ++ I+
Sbjct: 331 KGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIR 383

Length = 399

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 68.4 bits (168), Expect = 1e-12
 Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 14/228 (6%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           VI+L  G+P   +  H      EA+ EA  +   + Y+P  G P  + A A++  R+   
Sbjct: 34  VINLGQGNPDQPTPEHIV----EALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGV 89

Query: 97  KLTPN-DVFVTSGC-TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
            L P  +V +  G     +++   L++ PG  IL+P PG+P Y    A    +     L+
Sbjct: 90  TLDPETEVAILFGGKAGLVELPQCLMN-PGDTILVPDPGYPDYLSGVALARAQFETMPLI 148

Query: 155 PDKGWEVDLDDI-ESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
            +  +  D   I E +A++    L+ +N P NP G V +    ++    A K    V+ D
Sbjct: 149 AENNFLPDYTKIPEEVAEK--AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHD 206

Query: 213 EVYGHLVF-GDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFV 258
             YG + F G KP   +   G+  V I  L +LSK + + GWR+ + V
Sbjct: 207 FAYGAIGFDGQKPVSFLQTPGAKDVGI-ELYTLSKTFNMAGWRVAFAV 253

Length = 389

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score = 66.2 bits (162), Expect = 6e-12
 Identities = 52/269 (19%), Positives = 117/269 (43%), Gaps = 25/269 (9%)

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSA 141
           R+ IA +       +L   +V + +G T+ I ++      +    +L+  P F  YE + 
Sbjct: 60  RKRIASF------EQLDLENVILGNGATELIFNIVKVTKPK---KVLILAPTFAEYERAL 110

Query: 142 AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
                E+ + +L  +  +  +   +E +  +    + + NP NP G + S + ++K+ + 
Sbjct: 111 KAFDAEIEYAELTEETNFAANEIVLEEI-KEEIDLVFLCNPNNPTGQLISKEEMKKILDK 169

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
             K    +I DE +   +  ++    +    +   ++ + + +K + +PG RLG+ +T++
Sbjct: 170 CEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229

Query: 262 PCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320
                   K+++  + +  +   D A   Q  +       D+ + KKT+  +K+  D  Y
Sbjct: 230 ---KNLAEKLLQMREPWSINTFADLAG--QTLL------DDKEYIKKTIQWIKEEKDFLY 278

Query: 321 NKIKEIPCISCPHKPEGSMAVMLKLNLSL 349
           N + E   I   +KP  +  +  KL   +
Sbjct: 279 NGLSEFKGIK-VYKPSVNF-IFFKLEKPI 305

Length = 354

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score = 63.5 bits (155), Expect = 6e-11
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 7/208 (3%)

Query: 57  ATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTS-GCT 110
           A E+V E L  E    +  GYA   G+   + A A Y+ +    K + P    + S G  
Sbjct: 58  ADESVVEVLCEEAKKPENRGYADN-GIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSK 116

Query: 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170
            A+ +  +    PG   L+  PG+P+      +   EV +  LL +  +  DLD I    
Sbjct: 117 PALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDI 176

Query: 171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230
            +    L +  P NP G V + +  +++ + A +   +V+ D  Y  L F  KP   + V
Sbjct: 177 KEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSV 236

Query: 231 FGSTVPILTLGSLSKRWIVPGWRLGWFV 258
            G+    + + SLSK + + GWRL + V
Sbjct: 237 PGAKEVGVEIHSLSKAYNMTGWRLAFVV 264

Length = 410

>gnl|CDD|235742 PRK06207, PRK06207, aspartate aminotransferase; Provisional

 Score = 62.5 bits (152), Expect = 1e-10
 Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 34/274 (12%)

Query: 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205
           +++ +     DK   +DLD +E          +  NP NP G VYS + + ++A  A + 
Sbjct: 153 VQLDYLSA--DKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRY 210

Query: 206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-----LTLGSLSKRWIVPGWRLGWFVTT 260
              VI D++Y  L++    +  +      +PI     +T+   SK   + G+RLG     
Sbjct: 211 GATVIVDQLYSRLLYDGTSYTHL----RALPIDPENVITIMGPSKTESLSGYRLGV---- 262

Query: 261 DPCGMFRKPKVVERMKKYFDILG-DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319
                F  P +++RM+K   I+    A + QA + +   +PD  + K  +   +   D  
Sbjct: 263 ----AFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDG-WMKDRIARHQAIRDDL 317

Query: 320 YNKIKEIPCISCPHKPE-GS--MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA 376
              ++ +  +     P+ GS     + +L +SL        DF   L  +  VI+ PGT 
Sbjct: 318 LRVLRGVEGVFV-RAPQAGSYLFPRLPRLAVSL-------HDFVKILRLQAGVIVTPGTE 369

Query: 377 VG--LKNWLRVTFAVDPYSLEECLDRIKSFYQRH 408
                 + +R+ F+ D  +     +RI    +R+
Sbjct: 370 FSPHTADSIRLNFSQDHAAAVAAAERIAQLIERY 403

Length = 405

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 24/191 (12%)

Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
           P  G    R+ IA  L   +        V   SG  + I +    + + G NI+     F
Sbjct: 62  PDGGATTLRQTIANKLHVKM------EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATF 115

Query: 135 PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
           P Y   A     EV+   L        DLD+I S+ D +T  + I NP NP G   + + 
Sbjct: 116 PQYRHHAIIEGCEVKEVAL---NNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRK 172

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-------ILTLGSLSKRW 247
           L +  E  ++  TL++ DE Y         +V    F  T+P       IL L + SK +
Sbjct: 173 LTQFIEGISE-NTLIVIDEAY-------YEYVTAKDFPETLPLLEKHKNILVLRTFSKAY 224

Query: 248 IVPGWRLGWFV 258
            +  +R+G+ V
Sbjct: 225 GLASFRVGYAV 235

Length = 366

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 61.4 bits (150), Expect = 3e-10
 Identities = 96/442 (21%), Positives = 174/442 (39%), Gaps = 103/442 (23%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPT--------VHSCFHTTHVATEAVAEALLSEKFNGYAP 75
           LM  ++D       I L  G+P                     + +A   L+E    Y  
Sbjct: 19  LMDDLNDGLRTPGAIMLGGGNPAHIPEMEDYFRDLL------ADLLASGKLTEALGNYDG 72

Query: 76  TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-----ILLP 130
             G      A+A  L+    + ++P ++ +T+G   A      L +   A+     IL P
Sbjct: 73  PQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFP 132

Query: 131 -RPGFPIY-------ELSAAFR-HIEVRHFDLLPDK--GWEVDLDDIESLADQNTVALVI 179
             P +  Y       +L  ++R +IE     LLP+    + VD + +    D++T A+ +
Sbjct: 133 LAPEYIGYADAGLEEDLFVSYRPNIE-----LLPEGQFKYHVDFEHLH--IDEDTGAICV 185

Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG----HLVFGD-KPFVPMGVFGST 234
             P NP GNV + + L+KL   A +    ++ D  YG     ++F +  P      +   
Sbjct: 186 SRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPL-----WNPN 240

Query: 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQAAV 293
           + IL + SLSK  + PG R G  V  D        +++E +     I+   P     A  
Sbjct: 241 I-ILCM-SLSKLGL-PGVRCG-IVIAD-------EEIIEALSNMNGIISLAPGRLGPAIA 289

Query: 294 PSILQQPD------EV---FFKK----TLNLLKQSVDICYNKIKEIPC-ISCPHKPEGSM 339
             +++  D       V   F+++     + LL++        + + PC I   HKPEG++
Sbjct: 290 AEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRY-------LPDEPCLI---HKPEGAI 339

Query: 340 AVMLKL-NLSLLDDIIDDIDFCFKLAKEESVIILPGTA--VGLK-NW------LRVTFAV 389
            + L   +L      I   +  ++  K   V+++PG     GL  +W      +R+ +  
Sbjct: 340 FLWLWFKDLP-----ITTEEL-YQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ 393

Query: 390 DPYSLEECLDRI----KSFYQR 407
           D   +E+ +  +    +  Y  
Sbjct: 394 DDEEIEKGIAILAEEVEKAYAE 415

Length = 416

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 61.3 bits (149), Expect = 3e-10
 Identities = 98/422 (23%), Positives = 169/422 (40%), Gaps = 73/422 (17%)

Query: 21  LSLLMQSVDDEKNEKKVISLAMGDPT----VHSCFHTTHVATEAVAEALLSEKFNGYAPT 76
           ++ LM  ++D       I L  G+P     +   F       E +A    +E    Y   
Sbjct: 16  ITQLMDDLNDGLRTPGAIMLGGGNPARIPEMDDYFQDL--LAEMLASGKATEALCNYDGP 73

Query: 77  AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-----ILLPR 131
            G  +   A+A+ L R+  + +T  ++ +T+G   A      L +   ++     ILLP 
Sbjct: 74  QGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPL 133

Query: 132 PGFPIYELSAAFRHIEVRHF-------DLLPDK--GWEVDLDDIESLADQNTVALVIINP 182
              P Y +  A   +E   F       +LLP     + VD + +     ++T A+ +  P
Sbjct: 134 A--PEY-IGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GESTGAICVSRP 188

Query: 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-----I 237
            NP GNV + + L KL   A +    +I D  YG       PF P  +F    P     I
Sbjct: 189 TNPTGNVLTDEELAKLDALARQHGIPLIIDNAYG------VPF-PGIIFSDATPLWNENI 241

Query: 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQA-AVPSI 296
           +   SLSK  + PG R G  +  +     +  + +  M     +   P     A A   I
Sbjct: 242 ILCMSLSKLGL-PGSRCGIIIANE-----KVIQAITNMNGIISL--APGRMGPAIAAEMI 293

Query: 297 -----LQQPDEV---FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS 348
                L+  ++V   F++   N ++ ++ I    + E  C+   HKPEG  A+ L L   
Sbjct: 294 ESGDLLRLSEQVIRPFYR---NRVQTTIAILRRYLPEYRCLI--HKPEG--AIFLWL--- 343

Query: 349 LLDDIIDDIDFCFKLAKEESVIILPGTA--VGL-KNW------LRVTFAVDPYSLEECLD 399
              D+    +  ++  K   V+++PG     GL K W      +R+ +  +P  +E+ + 
Sbjct: 344 WFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVA 403

Query: 400 RI 401
            +
Sbjct: 404 IL 405

Length = 417

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 60.7 bits (147), Expect = 4e-10
 Identities = 87/364 (23%), Positives = 154/364 (42%), Gaps = 56/364 (15%)

Query: 78  GLPLTRRAIAEYLS--RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GL   R+A+A ++   R    +  P+ + +T+G T A ++   +L+ PG  +L+P P +P
Sbjct: 96  GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYP 155

Query: 136 IYELSAAFR---HIEVRHFDLLPDKGWEVDLDDIESLADQNTVA-------LVIINPGNP 185
            ++    +R    I   H D      ++V    +E+ A Q   A       ++I NP NP
Sbjct: 156 GFDRDLRWRTGVKIVPIHCD--SSNNFQVTPQALEA-AYQEAEAANIRVRGVLITNPSNP 212

Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM-------GVFGSTVPIL 238
            G       L+ + +   +    +++DE+Y   VF    FV +       G  G    + 
Sbjct: 213 LGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVH 272

Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV---ERMKKYFDILGDPATFIQAAVPS 295
            + SLSK   +PG+R+G   + +        KVV    RM  +  +    ++  Q  + S
Sbjct: 273 IVYSLSKDLGLPGFRVGTIYSYN-------DKVVTTARRMSSFTLV----SSQTQHLLAS 321

Query: 296 ILQQPDEVFFKKTLNLLKQSVDICYNKIKE------IPCISCPHKPEGSMAVMLKLNLSL 349
           +L   DE F +  +   ++ +   Y  I +      I C+      +G+  +   +NLS 
Sbjct: 322 MLS--DEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECL------KGNAGLFCWMNLSP 373

Query: 350 L---DDIIDDIDFCFKLAKEESVIILPGTAVGLKN--WLRVTFA-VDPYSLEECLDRIKS 403
           L        ++     + +E  + I PG++       W RV FA +   +LE  L RI  
Sbjct: 374 LLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHR 433

Query: 404 FYQR 407
           F  R
Sbjct: 434 FMDR 437

Length = 447

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 60.5 bits (146), Expect = 6e-10
 Identities = 79/358 (22%), Positives = 147/358 (41%), Gaps = 32/358 (8%)

Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GL   R+AIA ++ +    K+T  P  V ++ G T A +  M  L+ PG   L+P P + 
Sbjct: 95  GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYA 154

Query: 136 IYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIE------SLADQNTVALVIINPGNPCGN 188
            ++    +R  +E+          +++ +D  +        +++    L++ NP NP G 
Sbjct: 155 AFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT 214

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG------- 241
           +     L  L     +    ++ DE+Y   VF    FV +    + V I  +        
Sbjct: 215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274

Query: 242 -SLSKRWIVPGWRLGWFVTTDPCGMFRKPKV-VERMKKYFDILGDPATFIQAAVPSILQQ 299
            SLSK   +PG+R+G   +      F    V   R    F ++      + A++ S  Q 
Sbjct: 275 YSLSKDMGLPGFRVGIVYS------FNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQF 328

Query: 300 PDEVFFKKTLNL-LKQSVDICYNKIKEIPCISCPHKPEGSMAVM-LKLNLSLLDDIIDDI 357
            D    + +  L ++  V     K  +I C++      G  A M L+  L   +    +I
Sbjct: 329 VDNFLMESSRRLGIRHKVFTTGIKKADIACLT---SNAGLFAWMDLRHLLRDRNSFESEI 385

Query: 358 DFCFKLAKEESVIILPGTAVGLKN--WLRVTFA-VDPYSLEECLDRIKSFYQRHAKQL 412
           +    +  +  + + PG++       W R+ FA +D  +L   L RI+ F  ++  ++
Sbjct: 386 ELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKI 443

Length = 496

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score = 59.2 bits (144), Expect = 1e-09
 Identities = 75/348 (21%), Positives = 131/348 (37%), Gaps = 67/348 (19%)

Query: 57  ATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID- 114
            +  V EA+ +        P    P  R  +A++L       +    +   +G  + I  
Sbjct: 43  PSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVIQM 96

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174
           ++ ALL+ PG N ++  P F  Y  +A     EVR    +P K    DL+ +    D+ T
Sbjct: 97  ISRALLN-PGTNTVMAEPTFSQYRHNAIIEGAEVRE---VPLKDGGHDLEAMLKAIDEQT 152

Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234
             + I NP NP G   +++ L    E+      LV+ DE Y         +V    +  T
Sbjct: 153 KIVWICNPNNPTGTYVNHEELLSFLESVPS-HVLVVLDEAY-------YEYVTAEDYPDT 204

Query: 235 VPIL-------TLGSLSKRWIVPGWRLGWFVTT----DPCGMFRKPKVVERMKKYFDI-- 281
           +P+L        L + SK + +   R+G+ + +    +   + R P    R+ +Y  I  
Sbjct: 205 LPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPPFNTTRIAQYAAIAA 264

Query: 282 LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY-NKIKEIPCISCPHKPEGSMA 340
           L D A F++  V            +K    L+Q    C    +   P          S  
Sbjct: 265 LEDQA-FLKECV------------EKNAEGLEQYYAFCKEYGLFYYP----------SQT 301

Query: 341 --VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386
             + +            D +  F+   ++  I+  G A+G    +R+T
Sbjct: 302 NFIFVDTGR--------DANELFEALLKKGYIVRSGAALGFPTGVRIT 341

Length = 359

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score = 56.7 bits (137), Expect = 7e-09
 Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 8/188 (4%)

Query: 84  RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
           RA+ E ++      +  + + + +G    I V    + RPG  ++   P FP++E     
Sbjct: 74  RALREAIAAR--TGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTM 131

Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
               V    + PD G   DLD + +   +    L+  NP NP G+  +   L ++ + A 
Sbjct: 132 MGARVERVTVTPDLG--FDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLD-AT 188

Query: 204 KLKTLVIADEVYGHLVFGDK-PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
             +TL++ DE Y     GD  P     +    +P + L + SK + + G R+G+ + +DP
Sbjct: 189 PPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP 248

Query: 263 --CGMFRK 268
              G+  +
Sbjct: 249 ELVGLLDR 256

Length = 371

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score = 56.7 bits (137), Expect = 7e-09
 Identities = 62/275 (22%), Positives = 104/275 (37%), Gaps = 45/275 (16%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA 118
           E + E L    FN Y P       R AIAE+      Y L   ++ V +G  + I   + 
Sbjct: 38  EEIFEELKRVPFNRY-PHITSDPLREAIAEF------YGLDAENIAVGNGSDELISYLVK 90

Query: 119 LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178
           L    G +I++  P F +Y   A    I V    L  D  + +D + I   A  N  A+ 
Sbjct: 91  LFE--GKHIVITPPTFGMYSFYAKLNGIPVIDVPLKED--FTIDGERIAEKAK-NASAVF 145

Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLKT--LVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
           I +P NP GN      LQ   E    L+T   V+ DE Y    F  K  + +        
Sbjct: 146 ICSPNNPTGN------LQPEEEILKVLETGKPVVLDEAYAE--FSGKSLIGL--IDEYPN 195

Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-----YFDILGDPATFIQA 291
           ++ L + SK + + G R G+             ++++ + +       +IL         
Sbjct: 196 LILLRTFSKAFGLAGIRAGY--------AIANEEIIDALYRIKPPFSLNILT------MK 241

Query: 292 AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326
            V   L   D    ++ ++ + +  +    ++ E 
Sbjct: 242 IVRLALDHYD--LIEERIDYIIKERERVRRELGEY 274

Length = 337

>gnl|CDD|178069 PLN02450, PLN02450, 1-aminocyclopropane-1-carboxylate synthase

 Score = 57.1 bits (138), Expect = 7e-09
 Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 22/198 (11%)

Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  + A+AE++S     K+T  PN + +T+G T A +  M  L+ PG   LLP P +P
Sbjct: 87  GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYP 146

Query: 136 IYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGN 188
            ++    +R  +E+         G+++    +E    Q          ++I NP NP G 
Sbjct: 147 GFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGT 206

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-----GST-----VPI 237
             +   L  L +        +I+DE+Y   VF    FV  M V       +T     V I
Sbjct: 207 TTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHI 266

Query: 238 LTLGSLSKRWIVPGWRLG 255
           +   SLSK   +PG+R+G
Sbjct: 267 VY--SLSKDLGLPGFRVG 282

Length = 468

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score = 56.1 bits (136), Expect = 1e-08
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 98  LTPNDVFVTSGCTQAIDVAMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156
           + P  V V+ G  + I++ +     PG   IL   P + +Y +SA    +E+R    L +
Sbjct: 72  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDN 131

Query: 157 KGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAE-TANKLKTLVIADEV 214
             W++DL  I    D   V +V + +P NP GN+ + Q L+ L E T    K +V+ADE 
Sbjct: 132 --WQLDLPAIADNLDG--VKVVYVCSPNNPTGNLINPQDLRTLLELTRG--KAIVVADEA 185

Query: 215 Y 215
           Y
Sbjct: 186 Y 186

Length = 351

>gnl|CDD|236009 PRK07392, PRK07392, threonine-phosphate decarboxylase; Validated

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 20/144 (13%)

Query: 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV--ALVIIN 181
              + L  P F  Y  +       V+   L  D+        +++L  Q T    L++ N
Sbjct: 97  LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNN 156

Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT-- 239
           P NP G ++S + +  L E       LV+ DE      F D  F+P     S +P L   
Sbjct: 157 PHNPTGKLWSREAILPLLEQFA----LVVVDE-----AFMD--FLPPDAEQSLIPCLAEY 205

Query: 240 -----LGSLSKRWIVPGWRLGWFV 258
                L SL+K + +PG RLG+ +
Sbjct: 206 PNLIILRSLTKFYSLPGLRLGYAI 229

Length = 360

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 56.0 bits (136), Expect = 2e-08
 Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 42/222 (18%)

Query: 62  AEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVTSGCTQA 112
           A+  + E  +G        P   L  T + + +YL +++     P    D+F   G T A
Sbjct: 114 ADEFVYELVDGIIGDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAA 173

Query: 113 I----DVAMA--LLSRPGANILLPRPGF---------PIYELSAAFRHIEVRHFDLLPDK 157
           +    D      LL + G  I L  P F         P Y+L       EV H +   + 
Sbjct: 174 MCYIFDSLKENGLL-KAGDKIALMTPIFTPYLEIPELPRYDL-------EVVHINADEEN 225

Query: 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET-ANKLKTLVI-ADEVY 215
            W+    ++E L D +  AL ++NP NP     S + L+K+A+    K   L+I  D+VY
Sbjct: 226 EWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVY 285

Query: 216 GHLVFGDKPFVPMGVFGSTVPILTLG--SLSKRWIVPGWRLG 255
           G   F D  F  +    + +P  T+   S SK +   GWRLG
Sbjct: 286 G--TFVDD-FRSL---FAVLPYNTILVYSFSKYFGATGWRLG 321

Length = 527

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score = 55.2 bits (134), Expect = 2e-08
 Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 23/164 (14%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID-V 115
           A EA+  A   ++ + Y   +G  L + A+AE       + + P  + + +G  + ++ +
Sbjct: 50  AIEAIRAAA--DELHRYPDGSGFEL-KAALAEK------FGVDPERIILGNGSDEILELL 100

Query: 116 AMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171
           A A L  PG  ++    GF +Y ++A    A + +EV      P K +  DLD + +   
Sbjct: 101 ARAYLG-PGDEVIYSEHGFAVYPIAAQAVGA-KPVEV------PAKDYGHDLDAMLAAVT 152

Query: 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
             T  + I NP NP G     + +++          LV+ DE Y
Sbjct: 153 PRTRLVFIANPNNPTGTYLPAEEVERFLAGVPP-DVLVVLDEAY 195

Length = 367

>gnl|CDD|163513 TIGR03801, asp_4_decarbox, aspartate 4-decarboxylase

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 93/412 (22%), Positives = 148/412 (35%), Gaps = 108/412 (26%)

Query: 62  AEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVTSGCTQA 112
            +A L E  +G        P   LP + + + +YL +++     P    D+F   G T A
Sbjct: 108 PDAFLYEMCDGIIGDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAA 167

Query: 113 I----DVAMA--LLSRPGANI--------------LLPRPGFPIYELSAAFRHIEVRHFD 152
           +    D   A  LL + G  I               LPR  F +  + A     +  H  
Sbjct: 168 MCYIFDSLKANELL-KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTH-- 224

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVI 210
                 W+    ++E L D +  AL ++NP NP     S + ++K+ +         +++
Sbjct: 225 -----TWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMIL 279

Query: 211 ADEVYGHLV------FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264
            D+VYG  V      F + P+  +GV+          S SK +   GWRLG         
Sbjct: 280 TDDVYGTFVDDFRSLFAELPYNTIGVY----------SFSKYFGATGWRLGTIALHKD-N 328

Query: 265 MFRK-------PKVVERMKKYFDILGDPAT--FI-------------QAAVPSILQQPDE 302
           +F K        K  E  K+Y  +  +P    FI               A  S  QQ   
Sbjct: 329 IFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQM 388

Query: 303 VFF------KKTLNLLKQSVDICYNKIK------EIPCISCPHKPEGSMAVMLKLNL--- 347
             F       K      ++ DIC  + K       +P      +    +A    ++L   
Sbjct: 389 ALFSLFALMDKENAYKAETKDICRRREKLLFRGLGLP----LQEDPNDVAYYTLIDLEEW 444

Query: 348 ----------SLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNW-LRVTFA 388
                     S L      +D  F+LA+E  +++LPG   G   W +RV+ A
Sbjct: 445 AEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLA 496

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1) [Energy metabolism, Amino acids and amines]. Length = 521

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score = 54.9 bits (133), Expect = 3e-08
 Identities = 60/273 (21%), Positives = 115/273 (42%), Gaps = 38/273 (13%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT-SGCTQAIDV 115
           A EA+ + L   K + Y P    P  R A+++Y        +   ++ V   G  + ID 
Sbjct: 52  AVEAIEKEL--SKIHRY-PEPDAPELREALSKY------TGVPVENIIVGGDGMDEVIDT 102

Query: 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175
            M     PG  +++P P F  YE+SA     +  +     D  + +D+D + +   + T 
Sbjct: 103 LMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREED--FSLDVDSVLNAITEKTK 160

Query: 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGST 234
            + +  P NP GN+   + ++K+ E       LV  DE Y  + F +  + P    + + 
Sbjct: 161 VIFLCTPNNPTGNLIPEEDIRKILE---STDALVFVDEAY--VEFAEYDYTPLALEYDN- 214

Query: 235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE---RMKKYFDILGDPATFIQA 291
             ++   + SK + + G R+G+              +++   R K  F +        QA
Sbjct: 215 --LIIGRTFSKVFGLAGLRIGYGFVP--------EWLIDYYMRAKTPFSL----TRLSQA 260

Query: 292 AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324
           A  + L   D+ + +K++    +S +  YN++ 
Sbjct: 261 AAIAALS--DKEYIEKSIEHGIKSREYLYNELP 291

Length = 361

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score = 54.9 bits (132), Expect = 3e-08
 Identities = 72/335 (21%), Positives = 135/335 (40%), Gaps = 51/335 (15%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA 118
           + + E + S + N Y       L R  +A Y S      + P ++FV +G  + I + M 
Sbjct: 42  KNIQEIVKSSQVNIYPDPTAEKL-REELARYCS------VVPTNIFVGNGSDEIIHLIML 94

Query: 119 LLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175
                G  ++ P P F +Y +    A    I V+   L  D  ++V    I+ +      
Sbjct: 95  AFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVK---LKEDYTYDVG-SFIKVIEKYQPK 150

Query: 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235
            + + NP NP G+V   + + K+ E +     +V+ DE Y    F     V   V     
Sbjct: 151 LVFLCNPNNPTGSVIEREDIIKIIEKSRG---IVVVDEAY--FEFYGNTIVD--VINEFE 203

Query: 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDP---ATFIQAA 292
            ++ L +LSK + + G R+G+ V              E + KY +++  P    +  Q  
Sbjct: 204 NLIVLRTLSKAFGLAGLRVGYAVAN------------ENILKYLNLVKSPYNINSLSQVI 251

Query: 293 VPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD 352
              +L+       K+ +N +    +    ++ +IP I     P  +  +++K        
Sbjct: 252 ALKVLRTG---VLKERVNYILNERERLIKELSKIPGIKV--YPSKTNFILVKF------- 299

Query: 353 IIDDIDFCFKLAKEESVIILPGTAV-GLKNWLRVT 386
              D D+ ++   E  +++   + V GL+  LR+T
Sbjct: 300 --KDADYVYQGLLERGILVRDFSKVEGLEGALRIT 332

Length = 351

>gnl|CDD|181512 PRK08637, PRK08637, hypothetical protein; Provisional

 Score = 54.6 bits (132), Expect = 3e-08
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 23/167 (13%)

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV---FVTSGCTQAIDVAMALLSRPGANILL 129
           YAP  G+P  R    E + R+ P  L+   +    VT+  T  + +   L    G  +LL
Sbjct: 40  YAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLL 98

Query: 130 PRPGFPIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESL---ADQNTVALVIIN-PGN 184
           P   +  Y+L+   R   E+  + +  + G   D D ++     A      +VI+N P N
Sbjct: 99  PDHNWGNYKLTFNTRRGAEIVTYPIFDEDG-GFDTDALKEALQAAYNKGKVIVILNFPNN 157

Query: 185 PCGNVYS---------YQHLQKLAETANKLKTLVIADEVYGHLVFGD 222
           P G  Y+          + +++LA+   K+  + + D+ Y  L + D
Sbjct: 158 PTG--YTPTEKEATAIVEAIKELADAGTKV--VAVVDDAYFGLFYED 200

Length = 388

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score = 54.1 bits (131), Expect = 5e-08
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 27/201 (13%)

Query: 31  EKN-EKKVISLAMGD---PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAI 86
           E N E K+I L +GD   P   +     H A + +  A   E F GY P  G    R  I
Sbjct: 29  EANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTA---ETFRGYGPEQGYDFLREKI 85

Query: 87  AEYLSRDLPYKLTPNDVFVTSG--CTQAIDVAMAL-LSRPGANILLPRPGFPIYELSAAF 143
           AE   +     ++ +++F++ G  C    D    L +  P   I +  P +P+Y  +   
Sbjct: 86  AENDYQARGCDISADEIFISDGAKC----DTGNILDIFGPDNTIAVTDPVYPVYVDTN-- 139

Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV------II---NPGNPCGNVYSYQH 194
             +  R  +   D  +   +  +   A+ N V  +      II    P NP G V + + 
Sbjct: 140 -VMAGRTGEANEDGRYS-GIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQ 197

Query: 195 LQKLAETANKLKTLVIADEVY 215
           L+   + A +  +L++ D  Y
Sbjct: 198 LKAWVDYAKENGSLILFDAAY 218

Length = 409

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score = 53.6 bits (129), Expect = 8e-08
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
           ++  PGF  Y  +      E+R + L    GW++    +E+L       L +  P NP G
Sbjct: 98  MIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLD-CLFLCTPNNPTG 156

Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247
            +   Q LQ +AE    L   +I DE +   +  +  F+P         +  L SL+K +
Sbjct: 157 LLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIP--QLADNPHLWVLRSLTKFY 214

Query: 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
            +PG RLG+ V +D          V RM++ 
Sbjct: 215 AIPGLRLGYLVNSDDAA-------VARMRRQ 238

Length = 356

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score = 53.5 bits (129), Expect = 9e-08
 Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V EAL + KF    P       R A+AE     L       ++ V  G  + ID+ M  +
Sbjct: 70  VLEALGNMKFPYVYPDPESRRLRAALAED--SGLE----SENILVGCGADELIDLLMRCV 123

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI-ESLADQNTVALVI 179
             PG  I+   P F +Y   AA    EV      PD  + +D+  I E++       L +
Sbjct: 124 LDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPD--FSLDVPRIVEAVETHKPKLLFL 181

Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
            +P NP G++ S   L K+ E    L  LV+ DE Y
Sbjct: 182 TSPNNPDGSIISDDDLLKILE----LPILVVLDEAY 213

Length = 380

>gnl|CDD|236316 PRK08636, PRK08636, aspartate aminotransferase; Provisional

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 83/369 (22%), Positives = 146/369 (39%), Gaps = 61/369 (16%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +I  +MG+P   +  H      + + E+    K +GY+ + G+   R AI  +  R    
Sbjct: 35  IIDFSMGNPDGPTPQHII----DKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNV 90

Query: 97  KLTPN-DVFVTSGC-------TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
            L P  +V  T G         QAI       + PG   ++P P +PI+  +       V
Sbjct: 91  DLDPETEVVATMGSKEGYVHLVQAI-------TNPGDVAIVPDPAYPIHSQAFILAGGNV 143

Query: 149 RHFDLLPDKGWEVDLD----DIESLADQNT--VALVIIN-PGNPCGNVYSYQHLQKLAET 201
               L  ++ +E+D D    ++E    +++     V++N P NP          ++L   
Sbjct: 144 HKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVAL 203

Query: 202 ANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260
           A K +  +I+D  Y  + F G K    + V G+    +   +LSK + + GWR+G+ V  
Sbjct: 204 AKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGN 263

Query: 261 DPCGMFRKPKVV---ERMKKYFDILGDPATF--IQAAVPSILQQPDEVF------FKKTL 309
                    K+V   +++K + D       F  IQ A    L             ++K  
Sbjct: 264 --------KKLVGALKKIKSWLDY----GMFTPIQVAATIALDGDQSCVEEIRETYRKRR 311

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
           ++L +S      +++         KP  SM V  K+        +  ++F  +L  E  V
Sbjct: 312 DVLIESFANAGWELQ---------KPRASMFVWAKIPEPARH--LGSLEFSKQLLTEAKV 360

Query: 370 IILPGTAVG 378
            + PG   G
Sbjct: 361 AVSPGIGFG 369

Length = 403

>gnl|CDD|236128 PRK07908, PRK07908, hypothetical protein; Provisional

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 55/187 (29%), Positives = 81/187 (43%), Gaps = 42/187 (22%)

Query: 82  TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR------PGFP 135
            R A+A    R      TP++V + +G  +      ALL+R     L PR      P F 
Sbjct: 63  ARAAVAARHGR------TPDEVLLLAGAAEG----FALLAR-----LRPRRAAVVHPSFT 107

Query: 136 IYELSAAFRH--IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSY 192
             E  AA R   I V    L P   + +D   +   AD     LV+I NP NP   ++  
Sbjct: 108 --EPEAALRAAGIPVHRVVLDPP--FRLDPAAVPDDAD-----LVVIGNPTNPTSVLHPA 158

Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPG 251
           + L  L       + LV+ DE +   V G+    P  + G  +P +L L SL+K W + G
Sbjct: 159 EQLLALRRPG---RILVV-DEAFADAVPGE----PESLAGDDLPGVLVLRSLTKTWSLAG 210

Query: 252 WRLGWFV 258
            R+G+ +
Sbjct: 211 LRVGYAL 217

Length = 349

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score = 52.2 bits (126), Expect = 2e-07
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 9/114 (7%)

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174
           +A+A  ++PGA +L P PGF +Y +SA    +E     L  D  + +DL  + +   ++ 
Sbjct: 97  LALAC-AKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD--FTLDLPAMLAAIAEHR 153

Query: 175 VALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227
            ALV +  P NP GN++    ++++ E A     LV+ DE Y    F    ++P
Sbjct: 154 PALVFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQ--PFAGDSWLP 202

Length = 356

>gnl|CDD|235311 PRK04781, PRK04781, histidinol-phosphate aminotransferase; Provisional

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 7/163 (4%)

Query: 96  YKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLPRPGFPIYELSAAFRHIEVRHFDLL 154
           Y   P  + +  G  +AID+ +  L  PG + +L+  P F +Y + A  ++  +    L+
Sbjct: 72  YGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLV 131

Query: 155 PDK-GWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
               G+  D+  I + A  +   LV + +P NP G+  +   +++  +     K LV+ D
Sbjct: 132 DGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG-KALVVVD 190

Query: 213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
           E YG   F D P   +G+      +  L +LSK   +   R+G
Sbjct: 191 EAYGE--FSDVPSA-VGLLARYDNLAVLRTLSKAHALAAARIG 230

Length = 364

>gnl|CDD|180947 PRK07366, PRK07366, succinyldiaminopimelate transaminase; Validated

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 84/361 (23%), Positives = 145/361 (40%), Gaps = 34/361 (9%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI-D 114
           A EA+A++L     +GY    G    R A A++  +     + P  +V    G  +    
Sbjct: 48  ALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAH 107

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174
           + +A+L+ PG   LL  PG+P +         ++    L  +  +     DI +      
Sbjct: 108 LPLAVLN-PGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQA 166

Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--- 231
             +V+  P NP   +      Q+      +   +++ D  Y  LVF  +   P  +    
Sbjct: 167 RLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPP-SILQAD 225

Query: 232 -GSTVPILTLGSLSKRWIVPGWRLGWFV-TTDPCGMFRKPKVVERMKKYFDILGDPATFI 289
              +V I    +LSK + + G+R+G+ +         R+ K V    +Y  IL       
Sbjct: 226 PEKSVSI-EFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGIL------- 277

Query: 290 QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI----PCISCPHKPEGSMAVMLKL 345
             A+ + L  P     ++T+ + +Q  D   N + +I    P       PE +M V  KL
Sbjct: 278 NGAIAA-LTGPQA-TVQQTVQIFRQRRDAFINALHQIGWPVP------LPEATMYVWAKL 329

Query: 346 NLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAV--DPYSLEECLDRIKS 403
                 +    ++FC +L  +  V   PG+  G      V FA+  DP  LEE ++RI +
Sbjct: 330 PEPWQGN---SVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAA 386

Query: 404 F 404
           F
Sbjct: 387 F 387

Length = 388

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 47.0 bits (112), Expect = 7e-06
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 18/169 (10%)

Query: 88  EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE 147
           E+L  +   KL    + +T+G T+A+ +   L  R    +++PR  +  YE  A F    
Sbjct: 43  EWLEEEF-SKLFGEPIVITAGITEALYLIGILALR-DRKVIIPRHTYGEYERVARFFAAR 100

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           +        KG   D + +E L ++N+V +   NP NP G  Y+++ L+ L +       
Sbjct: 101 II-------KG-PNDPEKLEELVERNSV-VFFCNPNNPDGKFYNFKELKPLLDAVEDRNA 151

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
           L+I DE      F D  FV          I+ L + +K + +PG R+G+
Sbjct: 152 LLILDE-----AFID--FVKKPESPEGENIIKLRTFTKSYGLPGIRVGY 193

Length = 311

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 22/151 (14%)

Query: 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185
           NI++  P F  Y+  A    I       LP   + +  ++ E L + N   + I++P NP
Sbjct: 81  NIIIVEPNFNEYKGYAFTHGIR---ISALP---FNLINNNPEILNNYNFDLIFIVSPDNP 134

Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI------LT 239
            GN+ S   L  ++E   K   L+  DE      F D  FVP       V +      + 
Sbjct: 135 LGNLISRDSLLTISEICRKKGALLFIDE-----AFID--FVP-NRAEEDVLLNRSYGNVI 186

Query: 240 LG-SLSKRWIVPGWRLGWFVTTD-PCGMFRK 268
           +G SL+K   +P  R+G+  T D    + RK
Sbjct: 187 IGRSLTKILGIPSLRIGYIATDDYNMKISRK 217

Length = 332

>gnl|CDD|181651 PRK09105, PRK09105, putative aminotransferase; Provisional

 Score = 45.4 bits (108), Expect = 3e-05
 Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 29/220 (13%)

Query: 97  KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156
            L  + V   +G ++ ++ A+   + P A ++   P +     +A  +   V    L  D
Sbjct: 92  GLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRAD 151

Query: 157 KGWEVDLDDIESL--ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADE 213
                   D++++  AD N   + I NP NP G V     ++ L   ANK   ++++ DE
Sbjct: 152 GA-----HDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLL--ANKPAGSVLLVDE 204

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
            Y H  F D P V + +      ++ L + SK + + G RLG            +P ++ 
Sbjct: 205 AYIH--FSDAPSV-VDLVAQRKDLIVLRTFSKLYGMAGMRLGL--------AAARPDLLA 253

Query: 274 RMKKYFDILGD---PATFIQAAVPSILQQPDEVFFKKTLN 310
           ++ ++    G    P     A + S L+ P  V  ++  N
Sbjct: 254 KLARF----GHNPLPVPAAAAGLAS-LRDPKLVPQRRAEN 288

Length = 370

>gnl|CDD|179869 PRK04635, PRK04635, histidinol-phosphate aminotransferase; Provisional

 Score = 44.3 bits (105), Expect = 8e-05
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 9/121 (7%)

Query: 97  KLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLPRPGFPIYELSAAFRHIEVRHFDLLP 155
            + P  +  + G  +AI++ +     PG + I    P + +Y +SA   ++ V+   L  
Sbjct: 74  GVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA 133

Query: 156 DKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214
           D  +++ LD IE L       LV I NP NP G V     +++L E       +V+ DE 
Sbjct: 134 D--YQLPLDYIEQLDG---AKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEA 186

Query: 215 Y 215
           Y
Sbjct: 187 Y 187

Length = 354

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 19/171 (11%)

Query: 60  AVAEA---LLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAI 113
           AV +A   LL ++    Y P  GLP    A+ + L       L  + V    T G T A+
Sbjct: 48  AVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGAL 107

Query: 114 DVAMALLSR--PGANILLPRPGFPIYELSAAFRH--IEVRHFDLLPDKGWEVDLDDIESL 169
            VA   L+R  P A + +  P +P +   A F    +EV  +     +   +D D +  L
Sbjct: 108 RVAADFLARFFPDATVWISDPTWPNH--KAIFEAAGLEVETYPYYDAETKGLDFDGM--L 163

Query: 170 ADQNTVA---LVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
           AD  T     +V+++    NP G   + +  Q+LA+   +   +   D  Y
Sbjct: 164 ADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY 214

Length = 396

>gnl|CDD|223699 COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

 Score = 43.3 bits (103), Expect = 1e-04
 Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 13/120 (10%)

Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PIYELSAAFR---HIEVRHFDLLPD 156
            D F  S    AI  A+  L + G ++LLP   +   Y L         +EV   D    
Sbjct: 79  EDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP--- 135

Query: 157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216
                D     ++ + NT  + +  P NP   V     +  +A  A     LV+ D  + 
Sbjct: 136 ---GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFA 189

Length = 396

>gnl|CDD|99738 cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

 Score = 41.8 bits (99), Expect = 4e-04
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 18/107 (16%)

Query: 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV------DLDD 165
           AI   +  L + G +++     +        +R  E     LLP  G EV      D + 
Sbjct: 67  AISTVLLALLKAGDHVVASDDLY-----GGTYRLFE----RLLPKLGIEVTFVDPDDPEA 117

Query: 166 IESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
           +E+     T  + + +P NP   V     ++ +AE A++   L++ D
Sbjct: 118 LEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVD 161

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life. Length = 369

>gnl|CDD|224919 COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism]

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 22/158 (13%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRA---IAEYLSRDLPYKLTPNDVFVTSGCTQAI 113
            T  + EAL +    G       P T      IAE   ++         +FV SG TQA 
Sbjct: 12  PTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGKE-------AALFVPSG-TQAN 63

Query: 114 DVAMALLSRPGANILLPRPG-FPIYELSAA--FRHIEVRHFDLLPDKGWEVDLDDIESLA 170
            +A+A   +PG +++          E  A   F   +       P    ++  +D+E+  
Sbjct: 64  QLALAAHCQPGESVICHETAHIYTDECGAPEFFGGGQKLPIV--PGADGKLTPEDVEAAI 121

Query: 171 DQN------TVALVIINPGNPCGNVYSYQHLQKLAETA 202
             +      T   V+ N     G VY    L+ ++   
Sbjct: 122 RPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC 159

Length = 342

>gnl|CDD|215829 pfam00266, Aminotran_5, Aminotransferase class-V

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 23/148 (15%)

Query: 82  TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID-VAMALLS--RPGANILLPRPG----- 133
            R  +AE+++     ++    +F TSG T+AI+ VA++L    +PG  IL+         
Sbjct: 48  AREKVAEFINAPSDEEI----IF-TSGTTEAINLVAISLGRSLKPGDEILVTEMEHHANL 102

Query: 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG-NPCGNVYSY 192
            P  EL A      VR   +  D    +DLD +E L    T  LV I    N  G V   
Sbjct: 103 VPWQEL-AKRTGATVRVIPV--DPNGLLDLDALEKLLTPRT-KLVAITHVSNVTGTV--- 155

Query: 193 QHLQKLAETANKLKTLVIADEV--YGHL 218
             ++++ + A++   LV+ D     GH 
Sbjct: 156 NPVEEIGKLAHEYGALVVVDAAQAVGHR 183

This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Length = 370

>gnl|CDD|234769 PRK00451, PRK00451, glycine dehydrogenase subunit 1; Validated

 Score = 40.5 bits (96), Expect = 0.001
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 11/101 (10%)

Query: 115 VAMALLSRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170
             MA+       +L+     P Y    +     + IEV             DL+ +E+  
Sbjct: 145 ALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGV---TDLEALEAAV 201

Query: 171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
           D +T A+V+  P N  G +   + L+++AE A+    L I 
Sbjct: 202 DDDTAAVVVQYP-NFFGVI---EDLEEIAEIAHAGGALFIV 238

Length = 447

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 87  AEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
            E L   L   L P +         T A + A+  L  PG  +++   G       AA  
Sbjct: 2   LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAEL 61

Query: 145 H-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAETA 202
              +     +       +D+  +E L  +  VAL++I       G +   + ++K+A+  
Sbjct: 62  AGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAK-- 119

Query: 203 NKLKTLVIADEVYGHLVFG-DKPFVPMGVFG 232
            +   L++ D            P V +   G
Sbjct: 120 -EYGILLLVDAA--SAGGASPAPGVLIPEGG 147

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	415
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN02656	409	tyrosine transaminase	100.0
PLN02187	462	rooty/superroot1	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PRK06855	433	aminotransferase; Validated	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
PRK09148	405	aminotransferase; Validated	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK07324	373	transaminase; Validated	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PLN02231	534	alanine transaminase	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
PRK07777	387	aminotransferase; Validated	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PRK08175	395	aminotransferase; Validated	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
PLN02368	407	alanine transaminase	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02397	423	aspartate transaminase	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
cd00609	350	AAT_like Aspartate aminotransferase family. This f	100.0
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	100.0
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	100.0
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	100.0
PLN02822	481	serine palmitoyltransferase	100.0
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	100.0
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	100.0
PRK10874	401	cysteine sulfinate desulfinase; Provisional	100.0
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	100.0
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	100.0
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	100.0
PRK13392	410	5-aminolevulinate synthase; Provisional	100.0
PLN02483	489	serine palmitoyltransferase	100.0
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	100.0
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	100.0
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	100.0
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	100.0
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	100.0
PRK02627	396	acetylornithine aminotransferase; Provisional	100.0
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	100.0
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	100.0
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	100.0
PRK10534	333	L-threonine aldolase; Provisional	100.0
PRK07179	407	hypothetical protein; Provisional	99.98
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.98
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.98
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.98
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.97
PRK09064	407	5-aminolevulinate synthase; Validated	99.97
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.97
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.97
PLN02721	353	threonine aldolase	99.97
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.97
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.97
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.97
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.97
PRK13393	406	5-aminolevulinate synthase; Provisional	99.97
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.97
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.97
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.97
PRK02948	381	cysteine desulfurase; Provisional	99.97
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.97
PRK07049	427	methionine gamma-lyase; Validated	99.97
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.97
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.97
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.97
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.96
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.96
PLN02409	401	serine--glyoxylate aminotransaminase	99.96
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.96
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.96
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.96
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.96
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.96
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.96
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.96
PRK06234	400	methionine gamma-lyase; Provisional	99.96
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.96
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.96
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.96
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.95
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.95
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.95
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.95
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.95
PLN02242	418	methionine gamma-lyase	99.95
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.95
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.95
PRK06767	386	methionine gamma-lyase; Provisional	99.95
PRK08776	405	cystathionine gamma-synthase; Provisional	99.95
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.95
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.95
PRK14012	404	cysteine desulfurase; Provisional	99.95
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.95
PLN02955	476	8-amino-7-oxononanoate synthase	99.95
PRK08045	386	cystathionine gamma-synthase; Provisional	99.95
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.95
PRK08249	398	cystathionine gamma-synthase; Provisional	99.95
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.95
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.95
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.95
PRK08861	388	cystathionine gamma-synthase; Provisional	99.95
PRK04260	375	acetylornithine aminotransferase; Provisional	99.95
PRK09028	394	cystathionine beta-lyase; Provisional	99.94
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.94
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.94
PRK07505	402	hypothetical protein; Provisional	99.94
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.94
PRK07811	388	cystathionine gamma-synthase; Provisional	99.94
PRK07503	403	methionine gamma-lyase; Provisional	99.94
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.94
PRK06460	376	hypothetical protein; Provisional	99.94
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.94
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.94
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.94
PLN00144	382	acetylornithine transaminase	99.94
PLN02651	364	cysteine desulfurase	99.94
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.94
PRK07582	366	cystathionine gamma-lyase; Validated	99.94
PRK08574	385	cystathionine gamma-synthase; Provisional	99.94
PRK07050	394	cystathionine beta-lyase; Provisional	99.94
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.93
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.93
PRK05968	389	hypothetical protein; Provisional	99.93
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.93
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.93
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.93
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.93
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.93
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.93
PLN02624	474	ornithine-delta-aminotransferase	99.93
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.92
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.92
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.92
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.92
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.92
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.92
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.92
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.92
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.92
PRK05939	397	hypothetical protein; Provisional	99.92
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.92
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.92
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.92
PRK08064	390	cystathionine beta-lyase; Provisional	99.92
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.92
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.91
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.91
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.91
PRK07671	377	cystathionine beta-lyase; Provisional	99.91
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.91
PLN02509	464	cystathionine beta-lyase	99.91
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.91
PRK05967	395	cystathionine beta-lyase; Provisional	99.91
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.91
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.9
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.9
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.9
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.9
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.9
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.9
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.9
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.9
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.9
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.9
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.89
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.89
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.89
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.89
PRK08114	395	cystathionine beta-lyase; Provisional	99.89
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.89
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.88
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.88
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.88
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.88
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.88
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.88
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.88
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
PLN02724	805	Molybdenum cofactor sulfurase	99.88
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.88
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.87
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.87
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.87
PRK06541	460	hypothetical protein; Provisional	99.86
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.86
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.86
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.86
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.86
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.86
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.86
PRK06434	384	cystathionine gamma-lyase; Validated	99.85
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.85
PRK03080	378	phosphoserine aminotransferase; Provisional	99.85
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.85
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.85
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.85
PRK02769	380	histidine decarboxylase; Provisional	99.85
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.84
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.84
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.84
PRK07046	453	aminotransferase; Validated	99.84
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.83
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.83
PRK07482	461	hypothetical protein; Provisional	99.83
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.83
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.83
PLN02590	539	probable tyrosine decarboxylase	99.83
PLN02880	490	tyrosine decarboxylase	99.83
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.83
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.83
PRK07678	451	aminotransferase; Validated	99.83
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.83
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.83
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.83
PRK12403	460	putative aminotransferase; Provisional	99.82
PRK05965	459	hypothetical protein; Provisional	99.82
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.82
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.82
PRK06062	451	hypothetical protein; Provisional	99.82
PRK06105	460	aminotransferase; Provisional	99.82
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.82
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.82
PLN03032	374	serine decarboxylase; Provisional	99.81
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.81
PRK13237	460	tyrosine phenol-lyase; Provisional	99.81
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.81
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.81
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.81
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.8
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.8
PLN02271	586	serine hydroxymethyltransferase	99.8
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.8
PRK06149	972	hypothetical protein; Provisional	99.8
PRK07481	449	hypothetical protein; Provisional	99.8
PRK07480	456	putative aminotransferase; Validated	99.8
PRK06148	1013	hypothetical protein; Provisional	99.79
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.79
PRK06917	447	hypothetical protein; Provisional	99.79
PRK07036	466	hypothetical protein; Provisional	99.79
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.79
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.79
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.79
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.79
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.78
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.78
PRK07483	443	hypothetical protein; Provisional	99.78
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.77
PRK04311	464	selenocysteine synthase; Provisional	99.77
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.77
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.77
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.76
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.76
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.76
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.75
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	99.75
PRK08297	443	L-lysine aminotransferase; Provisional	99.74
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.74
PLN02263	470	serine decarboxylase	99.74
PRK05367	954	glycine dehydrogenase; Provisional	99.73
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.73
PLN02452	365	phosphoserine transaminase	99.71
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.71
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.71
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.7
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.7
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.7
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.7
PRK15029	755	arginine decarboxylase; Provisional	99.7
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.69
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.69
PRK12566	954	glycine dehydrogenase; Provisional	99.67
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.66
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	99.65
PRK12462	364	phosphoserine aminotransferase; Provisional	99.63
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.61
PRK13578	720	ornithine decarboxylase; Provisional	99.61
PRK05367	954	glycine dehydrogenase; Provisional	99.57
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.57
PRK15400	714	lysine decarboxylase CadA; Provisional	99.57
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.55
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.54
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.51
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.51
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	99.45
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.45
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.39
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.36
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.35
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.35
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	99.34
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.32
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.19
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.18
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.17
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	99.09
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	99.04
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.96
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	98.88
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.87
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.84
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.84
COG4100	416	Cystathionine beta-lyase family protein involved i	98.76
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	98.75
PRK12566	954	glycine dehydrogenase; Provisional	98.6
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	97.95
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	97.89
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	97.78
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	97.6
PLN02672	1082	methionine S-methyltransferase	97.12
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	95.45
COG2102	223	Predicted ATPases of PP-loop superfamily [General	80.06

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=3e-64  Score=435.43  Aligned_cols=400  Identities=59%  Similarity=1.063  Sum_probs=380.6

Q ss_pred             cchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHh
Q 014936           12 GSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS   91 (415)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~   91 (415)
                      .+.++++..++.+....+++ .+++++.++.|+|+.++++.+.+...+|+.++++.+..+.|.+..|....|+++|+|++
T Consensus        39 a~~~tir~i~~~l~~~~~p~-~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~  117 (447)
T KOG0259|consen   39 AASVTIRGILSALFDCCDPE-KKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLN  117 (447)
T ss_pred             hccccHHHHHHHHhhcCCcc-cCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhh
Confidence            34578999999888888652 34599999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC
Q 014936           92 RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD  171 (415)
Q Consensus        92 ~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~  171 (415)
                      +.....+++++|++|+|+++|+++++.+|.+||..|+++.|+|+-|...++..|++++.++.-|+.+|.+|++.++.+++
T Consensus       118 ~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D  197 (447)
T KOG0259|consen  118 RDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD  197 (447)
T ss_pred             cCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc
Confidence            98888899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936          172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (415)
Q Consensus       172 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  251 (415)
                      ++|.++++.||+||.|.+++.+.|++|++.|+++++.+|.||+|.+++|++.++.++..+.....|+.+++.||.|..||
T Consensus       198 ENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPG  277 (447)
T KOG0259|consen  198 ENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPG  277 (447)
T ss_pred             cCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999998889999999999999999


Q ss_pred             ceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936          252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC  331 (415)
Q Consensus       252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  331 (415)
                      ||+||++..++..++.+....+.+..+......++++.|.|+..+|+.-.++++.+....++.+.+.-.+.|+++|++.|
T Consensus       278 WRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~c  357 (447)
T KOG0259|consen  278 WRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTC  357 (447)
T ss_pred             ceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCccc
Confidence            99999999999999999888899999988888999999999999999887899999999999999999999999999998


Q ss_pred             CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHHHH
Q 014936          332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                      ...|++..|+|+.++..-+.+..++.+|+..|.+|+.+.+.||..|+.++|+|++++.+.+.+++++.||+++..++.++
T Consensus       358 p~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~RH~~~  437 (447)
T KOG0259|consen  358 PVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDRHSKE  437 (447)
T ss_pred             CcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHHHHHHHhhhhc
Confidence            88999999999999888777888999999999999999999999999999999999999999999999999999998854


Q ss_pred             h
Q 014936          412 L  412 (415)
Q Consensus       412 ~  412 (415)
                      +
T Consensus       438 ~  438 (447)
T KOG0259|consen  438 Q  438 (447)
T ss_pred             c
Confidence            3

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.4e-60  Score=439.68  Aligned_cols=357  Identities=29%  Similarity=0.512  Sum_probs=320.4

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc-EEEeCChHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAI  113 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~i~~g~~~al  113 (415)
                      .++|+|+.|+|+    +++++.+++++.+.+..+.. .|.+..|.++||++||+++.+.+|..+++++ |++|+|+++++
T Consensus        28 ~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al  102 (393)
T COG0436          28 EDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL  102 (393)
T ss_pred             CCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence            679999999976    88899999999999887543 6778899999999999999999998888876 99999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC-CCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      ..++.+++++||+|++++|.|+.|.......|.+++.++...+ ++|.+|++.|+++++++||++++++||||||.+++.
T Consensus       103 ~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~  182 (393)
T COG0436         103 FLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSK  182 (393)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCH
Confidence            9999999999999999999999999999999999999997655 489999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|++||+++|.||+|..+.|++..+.++..+.. .+++|.+.||||.|+++|||+||+++++       .++
T Consensus       183 ~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~-------~~l  255 (393)
T COG0436         183 EELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP-------EEL  255 (393)
T ss_pred             HHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh-------HHH
Confidence            99999999999999999999999999999875666655554 4789999999999999999999999974       257


Q ss_pred             HHHHHhh-ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          272 VERMKKY-FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       272 ~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      ++.+... .....+++.+.|.++..+|+... ..+.+..++.++++|+.+.+.|.+++++.+...|.+++|+|++++.. 
T Consensus       256 ~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~-  334 (393)
T COG0436         256 IAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL-  334 (393)
T ss_pred             HHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-
Confidence            7777755 34556899999999999998754 36788888999999999999999998888553488999999999753 


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC---CeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLK---NWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                          .++.+++.+|+++.||.+.||+.|+.+   ++||++++.+++++++++++|.++++.+
T Consensus       335 ----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~  392 (393)
T COG0436         335 ----LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY  392 (393)
T ss_pred             ----CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence                378999999999999999999999975   8999999998899999999999988753

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=6.2e-59  Score=442.41  Aligned_cols=397  Identities=61%  Similarity=1.112  Sum_probs=337.3

Q ss_pred             hhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936           15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL   94 (415)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~   94 (415)
                      .+++..+..+.....+...+.++|+|+.|+|+..+++++++.+.+++.+.+.......|++..|.+++|+++++++++.+
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~  111 (430)
T PLN00145         32 LSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDL  111 (430)
T ss_pred             cchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhcc
Confidence            34555555554444321126789999999999888889999999999998876656689998999999999999999888


Q ss_pred             CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc
Q 014936           95 PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT  174 (415)
Q Consensus        95 ~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  174 (415)
                      +.++++++|++|+|+++++.+++.++.++||+|+++.|+|+.|...+...|+++..++..++++|.+|++.+++.+++++
T Consensus       112 ~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~  191 (430)
T PLN00145        112 PYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENT  191 (430)
T ss_pred             CCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCc
Confidence            88899999999999999999999999999999999999999999999999999999988777789999999999998899


Q ss_pred             eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      +++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.|++....++..++...++|+++||||.|++||||+
T Consensus       192 ~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~Rl  271 (430)
T PLN00145        192 VAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRL  271 (430)
T ss_pred             eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeE
Confidence            99999999999999999999999999999999999999999999987665566666666678999999999999999999


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       255 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      ||++++++..+....++.+.++........++.+.|.++..+|+...+.++++.++.++++++.+.+.|++++++.++..
T Consensus       272 G~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~  351 (430)
T PLN00145        272 GWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHK  351 (430)
T ss_pred             EEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcC
Confidence            99998654322211123344555444444568899999999998644688999999999999999999999888874447


Q ss_pred             CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                      |++|+|+|++++...+++..++.+++..+++++||.+.||..|+.++|+||+++.+.+++++++++|++++.++.++
T Consensus       352 P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~al~rl~~~~~~~~~~  428 (430)
T PLN00145        352 PEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLERLKSFCLRHAKL  428 (430)
T ss_pred             CCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence            99999999998753332333577889899999999999999999899999999988999999999999999887654

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=2.6e-58  Score=437.28  Aligned_cols=397  Identities=82%  Similarity=1.343  Sum_probs=339.5

Q ss_pred             hhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhh
Q 014936           14 IITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD   93 (415)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~   93 (415)
                      ..++...++.++++..++.+++++++|+.|+|+..+++++++.+++++.+.+.......|++..|.+++|+++++++++.
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~   89 (409)
T PLN02656         10 TITIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRD   89 (409)
T ss_pred             hhhhhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence            34578888888888876678899999999999876678889999999999888765678998899999999999999988


Q ss_pred             CCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC
Q 014936           94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN  173 (415)
Q Consensus        94 ~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~  173 (415)
                      +|..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|+++..++.++++++.+|++.+++.++++
T Consensus        90 ~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~  169 (409)
T PLN02656         90 LPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQN  169 (409)
T ss_pred             cCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccC
Confidence            88889999999999999999999999999999999999999999888888999999999876667889999999999888


Q ss_pred             ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      ++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..++...++|+++||||.|+++|+|
T Consensus       170 ~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlR  249 (409)
T PLN02656        170 TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWR  249 (409)
T ss_pred             ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCccee
Confidence            99999999999999999999999999999999999999999999998775555555555566899999999999999999


Q ss_pred             EEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936          254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH  333 (415)
Q Consensus       254 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  333 (415)
                      +||++++++..+..++++++.+........+++.+.|.++..+|++..+.++++.++.++++++.+.+.|++++++..+.
T Consensus       250 iG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~  329 (409)
T PLN02656        250 LGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPH  329 (409)
T ss_pred             EEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCc
Confidence            99999965333322346777777664433467889999999999764467899999999999999999999886554234


Q ss_pred             CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936          334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      .|.+|+|+|++++.....+..++.+++..+++++||.+.||+.|+.++++||+++.+++++++++++|++++.+++.
T Consensus       330 ~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~  406 (409)
T PLN02656        330 KPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSK  406 (409)
T ss_pred             CCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcc
Confidence            78999999999864322222235567777888899999999999888999999998999999999999999887654

>PLN02187 rooty/superroot1

Probab=100.00  E-value=5.2e-58  Score=438.70  Aligned_cols=394  Identities=52%  Similarity=0.979  Sum_probs=332.6

Q ss_pred             hhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936           15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL   94 (415)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~   94 (415)
                      ++++..++.+.+...+ ..++++++|+.|+|+..+.+.+++.+.+++.+.+..+....|++..|.+++|+++|+|+++.+
T Consensus        47 ~~~~~~~~~~~~~~~~-~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~  125 (462)
T PLN02187         47 VTLRGVIYMLFDNCGK-DVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDL  125 (462)
T ss_pred             chHhhHHHHHHhhccc-CCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhc
Confidence            4677777777655532 336789999999998777778889999999998886666689888999999999999999888


Q ss_pred             CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc
Q 014936           95 PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT  174 (415)
Q Consensus        95 ~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  174 (415)
                      +.++++++|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|+++..++..++++|.+|++.+++++++++
T Consensus       126 ~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~  205 (462)
T PLN02187        126 PHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENT  205 (462)
T ss_pred             CCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCc
Confidence            88999999999999999999999999999999999999999999999999999999998766778999999999998889


Q ss_pred             eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      +++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++..+.++..+....++++++||||.|++||+|+
T Consensus       206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRi  285 (462)
T PLN02187        206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKI  285 (462)
T ss_pred             EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcccee
Confidence            99999999999999999999999999999999999999999999987655555655655557999999999999999999


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936          255 GWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC  331 (415)
Q Consensus       255 G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  331 (415)
                      ||++++++..+.   ++++.+.....   ...+++.+.|.++..+|++..+.++++.++.++++++.+.+.|++++++.+
T Consensus       286 G~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~  362 (462)
T PLN02187        286 GWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVC  362 (462)
T ss_pred             EEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcC
Confidence            999986532111   12334433322   223457899999999997544689999999999999999999998865543


Q ss_pred             CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHHHH
Q 014936          332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                      +..|++|+|+|++++....++..++.+++..++.++||.+.||..|+.+++|||+++.+++.+++++++|.++++++.++
T Consensus       363 ~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~al~rL~~~l~~~~~~  442 (462)
T PLN02187        363 PKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK  442 (462)
T ss_pred             CCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhhc
Confidence            34688999999988643222222466788888889999999999998889999999989999999999999999988775


Q ss_pred             h
Q 014936          412 L  412 (415)
Q Consensus       412 ~  412 (415)
                      .
T Consensus       443 ~  443 (462)
T PLN02187        443 T  443 (462)
T ss_pred             c
Confidence            4

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=4e-57  Score=428.75  Aligned_cols=402  Identities=57%  Similarity=1.061  Sum_probs=330.3

Q ss_pred             ccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHH
Q 014936            8 IDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA   87 (415)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia   87 (415)
                      .+..++..++.+.+.++++.... ..++++|+|+.|+|+.+..+++++.+++++.+.+.......|+++.|.++||++||
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia   84 (409)
T PLN00143          6 LKTEPPSYSIDDAVKFLKENFNE-DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIA   84 (409)
T ss_pred             cCCCcccchHHHHHHHHHHhccc-CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHH
Confidence            34455555566666655554422 34789999999998755558889999999999888665667988899999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936           88 EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE  167 (415)
Q Consensus        88 ~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  167 (415)
                      +|+.+.+|.++++++|++|+|+++++..++.+++++||.|+++.|+|+.+...++..|+++..++..++++|.+|+++|+
T Consensus        85 ~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  164 (409)
T PLN00143         85 DYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVE  164 (409)
T ss_pred             HHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHH
Confidence            99998888889999999999999999999999999999999999999999999999999999998866667889999999


Q ss_pred             hhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936          168 SLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW  247 (415)
Q Consensus       168 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (415)
                      ++++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+...+++|+++||||.|
T Consensus       165 ~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f  244 (409)
T PLN00143        165 AIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRW  244 (409)
T ss_pred             HhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhc
Confidence            99888899999999999999999999999999999999999999999999998765444555555556899999999999


Q ss_pred             CCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                      +++|+|+||++++++..+....+.++.+.........++.+.|.++..+|++....++++.++.++++++.+.+.|++++
T Consensus       245 ~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~  324 (409)
T PLN00143        245 MIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIP  324 (409)
T ss_pred             CCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999854321110001233444333223345778999999999754467899999999999999999998875


Q ss_pred             CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      +..+...|++|+|+|++++....++..++.+++..++.++||.+.||..|+.++++||+++.+++++++++++|++++++
T Consensus       325 ~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~  404 (409)
T PLN00143        325 CIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGR  404 (409)
T ss_pred             CCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence            54423368899999999974211122246778888888899999999999888999999998899999999999999987


Q ss_pred             HHH
Q 014936          408 HAK  410 (415)
Q Consensus       408 ~~~  410 (415)
                      +.+
T Consensus       405 ~~~  407 (409)
T PLN00143        405 HAK  407 (409)
T ss_pred             hcc
Confidence            654

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=2.4e-54  Score=410.77  Aligned_cols=387  Identities=35%  Similarity=0.634  Sum_probs=323.2

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC-
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL-   94 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-   94 (415)
                      ++....+.+.+.    .+++++++|+.|+|+..+++.+++.+.+++.+.+.......|+++.|.++||++||+|+++.+ 
T Consensus        18 ~~~~~~~~~~~~----~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~   93 (412)
T PTZ00433         18 PLRTVTDNAKPS----PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFV   93 (412)
T ss_pred             cHHHHHHhhccC----CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhcc
Confidence            455555555433    258899999999987554567789999999998876555689998999999999999998743 


Q ss_pred             -----CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936           95 -----PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus        95 -----~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                           +..+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|+++..++.++++++++|++++++.
T Consensus        94 ~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~  173 (412)
T PTZ00433         94 HKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRL  173 (412)
T ss_pred             ccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHH
Confidence                 456889999999999999999999999999999999999999999999999999999987666788999999998


Q ss_pred             cCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC
Q 014936          170 ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV  249 (415)
Q Consensus       170 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  249 (415)
                      ++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++|+++||||.|++
T Consensus       174 ~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~  253 (412)
T PTZ00433        174 VDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVV  253 (412)
T ss_pred             hccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCC
Confidence            88889999999999999999999999999999999999999999999998876544455555544568999999999999


Q ss_pred             CCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936          250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCI  329 (415)
Q Consensus       250 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  329 (415)
                      +|+|+||++++++...  .+++++.+........+++++.|.++..++.+..+.++++.++.++++++.+.+.|+++.++
T Consensus       254 pGlRlG~~i~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~  331 (412)
T PTZ00433        254 PGWRLGWLLLVDPHGN--GGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGL  331 (412)
T ss_pred             CCeeEEEEEEeCCccc--HHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999997432211  12466666665433457888999999999876446889999999999999999999986577


Q ss_pred             cCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          330 SCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       330 ~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      . +..|++|+|+|++++.....+..++.+++..+++++||.+.||..|+.++++||+++.+++++++++++|.+++++++
T Consensus       332 ~-~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~  410 (412)
T PTZ00433        332 S-PTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHK  410 (412)
T ss_pred             c-ccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence            6 557899999999986422112224678888888778999999999988899999999889999999999999998665

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=3.2e-54  Score=419.90  Aligned_cols=394  Identities=23%  Similarity=0.415  Sum_probs=315.9

Q ss_pred             ccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 014936            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (415)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~   81 (415)
                      +.|++.....++  .+..+........   ..+.++++|+.|+|... ++++++.+++++.+.+..  ...|+++.|.++
T Consensus       118 ~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~  189 (517)
T PRK13355        118 KKSHKLDNVLYD--VRGPVVDEANRME---AAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLFS  189 (517)
T ss_pred             ChhHHhhccCcc--HHHHHHHHHHHHH---HcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChHH
Confidence            345555555555  2332333222221   34789999999998654 367788999999887763  347999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCC
Q 014936           82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (415)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (415)
                      ||++||+|+.+..+.++++++|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|.+++.++.+++++|.+
T Consensus       190 lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~  269 (517)
T PRK13355        190 ARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYP  269 (517)
T ss_pred             HHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCC
Confidence            99999999987666568999999999999999999999999999999999999999999999999999999877778999


Q ss_pred             ChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936          162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (415)
Q Consensus       162 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (415)
                      |+++++++++++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++....++..+..+..+++++
T Consensus       270 d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~  349 (517)
T PRK13355        270 DIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFS  349 (517)
T ss_pred             CHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEe
Confidence            99999999988999999999999999999999999999999999999999999999998876556666665544578889


Q ss_pred             cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHH
Q 014936          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l  319 (415)
                      ||||.|+++|+|+||++++....+.  .++++.+........+.+.++|.++..+|....  .+++.+. .++.++++.+
T Consensus       350 S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l  426 (517)
T PRK13355        350 GLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELV  426 (517)
T ss_pred             cchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHH
Confidence            9999999999999999975321110  023444443333335678889999999996432  3455554 3455668999


Q ss_pred             HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHH
Q 014936          320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEEC  397 (415)
Q Consensus       320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~  397 (415)
                      .+.|+++|++. +..|++++|+|++++....+ ..++.+++..+|.++||.+.||+.|+.  +++|||+++.++++|+++
T Consensus       427 ~~~L~~~~g~~-~~~p~g~fy~~~~l~~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a  504 (517)
T PRK13355        427 YNALNAIPGIS-AVKPKAAFYIFPKIDVKKFN-IHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDA  504 (517)
T ss_pred             HHHHhcCCCcc-cCCCCeeeEEEeecCcccCC-CCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHH
Confidence            99999988888 55899999999988642211 124677888888999999999999963  689999999899999999


Q ss_pred             HHHHHHHHHHH
Q 014936          398 LDRIKSFYQRH  408 (415)
Q Consensus       398 l~~l~~~~~~~  408 (415)
                      +++|.++++.+
T Consensus       505 ~~rl~~~~~~~  515 (517)
T PRK13355        505 MDRLADFFSYY  515 (517)
T ss_pred             HHHHHHHHHHh
Confidence            99999998764

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=8.7e-54  Score=406.08  Aligned_cols=389  Identities=52%  Similarity=0.955  Sum_probs=325.3

Q ss_pred             hhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936           15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL   94 (415)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~   94 (415)
                      +.++++.....+..   ..+.++++|+.|+|...+.+++++.+.+++.+.+.......|++..|.+++|++++++++...
T Consensus        14 ~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~   90 (403)
T TIGR01265        14 NPIRAIVDNLKVKP---NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDL   90 (403)
T ss_pred             HHHHHHHHHHHHHH---hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhc
Confidence            44555555444332   236899999999997666688899999999998876555689888999999999999999877


Q ss_pred             CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc
Q 014936           95 PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT  174 (415)
Q Consensus        95 ~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  174 (415)
                      +..+++++|++|+|+++++.+++.++.++||+|+++.|+|..+...++..|.++..++.++++++.+|++.+++.+.+++
T Consensus        91 ~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~  170 (403)
T TIGR01265        91 PGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKT  170 (403)
T ss_pred             CCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCc
Confidence            87788999999999999999999999999999999999999999999999999999888666677899999999988889


Q ss_pred             eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      +++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+....++|+++||||.|+++|+|+
T Consensus       171 ~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi  250 (403)
T TIGR01265       171 VAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRL  250 (403)
T ss_pred             cEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceE
Confidence            99999999999999999999999999999999999999999999987655556666666567999999999999999999


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       255 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      ||++++++..+. ..++.+.+.........++.+.|.++..+|++..+.++++.+++++++++.+.+.|+.++++. +..
T Consensus       251 G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~  328 (403)
T TIGR01265       251 GWIIIHDPHGIF-RDTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV-CPK  328 (403)
T ss_pred             EEEEEeCchhhh-HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecC
Confidence            999986432111 012444444443334567889999999999765568899999999999999999999887776 457


Q ss_pred             CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      |.+|+|+|++++.....+..++.+++..+++++||.+.||..|+.++++||+++.+++++++++++|.++++++
T Consensus       329 p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~  402 (403)
T TIGR01265       329 PEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCERH  402 (403)
T ss_pred             CCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            99999999999753221122567788888888999999999998889999999988899999999999988654

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.8e-54  Score=406.14  Aligned_cols=378  Identities=19%  Similarity=0.325  Sum_probs=314.8

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |+++.+.....++  .+...........   ..++++++|+.|+|+    +++++.+++++.+.+.....+.|++ .|.+
T Consensus         3 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~~-~G~~   72 (399)
T PRK07681          3 YTLATRMKAFQSS--IFSELGAYKKEKI---AAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYTL-SGIQ   72 (399)
T ss_pred             ccHhHHHhhcCcc--HHHHHHHHHHHhh---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCCC-CCcH
Confidence            4555555554554  3344333222111   346789999999875    5668889999988876544445664 7999


Q ss_pred             HHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  159 (415)
                      +||++||+|+++.+|..+++ ++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++++++|
T Consensus        73 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~  152 (399)
T PRK07681         73 EFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDF  152 (399)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCC
Confidence            99999999999888988998 89999999999999999999999999999999999999999999999999998776678


Q ss_pred             CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (415)
Q Consensus       160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i  238 (415)
                      .+|++++++.+.++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. .+++|
T Consensus       153 ~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i  232 (399)
T PRK07681        153 LPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGV  232 (399)
T ss_pred             cCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEE
Confidence            89999999888778999999999999999999999999999999999999999999999887655445544443 35789


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD  317 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  317 (415)
                      +++||||.|+++|+|+||+++++        ++++.+..... ...+++.+.|.++..+|++. ..++++.++.++++++
T Consensus       233 ~~~S~SK~~~~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~  303 (399)
T PRK07681        233 EINSLSKSYSLAGSRIGYMIGNE--------EIVRALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRD  303 (399)
T ss_pred             EEeecccccCCccceeEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHH
Confidence            99999999999999999999864        67888876643 34678888999999999764 4788888999999999


Q ss_pred             HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHH
Q 014936          318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLE  395 (415)
Q Consensus       318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~  395 (415)
                      .+.+.|+++ ++. +..|.+|+|+|++++..     .++.++...+++++||.+.||..|+.  ++++||+++.++++++
T Consensus       304 ~l~~~L~~~-g~~-~~~p~~g~f~~~~l~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~  376 (399)
T PRK07681        304 TLVDGFRTF-GWN-VDKPAGSMFVWAEIPKG-----WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQ  376 (399)
T ss_pred             HHHHHHHHC-CCc-ccCCCeeeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHH
Confidence            999999988 777 54789999999998742     25678888888878999999998875  4799999998889999


Q ss_pred             HHHHHHHHH
Q 014936          396 ECLDRIKSF  404 (415)
Q Consensus       396 ~~l~~l~~~  404 (415)
                      +++++|+++
T Consensus       377 ~~l~~l~~~  385 (399)
T PRK07681        377 QAVENIRNS  385 (399)
T ss_pred             HHHHHHHHh
Confidence            999999883

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=1.5e-53  Score=404.75  Aligned_cols=370  Identities=40%  Similarity=0.762  Sum_probs=311.6

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ++++++|+.|.|+...++++++.+.+++.+.+.......|++..|.++||+++++++.+ .+..+++++|++|+|+++++
T Consensus        30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~~~~~~~~~i~~t~G~~~al  108 (401)
T TIGR01264        30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-PDGPIEADDVVLCSGCSHAI  108 (401)
T ss_pred             CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-cCCCCCHHHEEECcChHHHH
Confidence            57889999999864334778899999999987765556798889999999999999986 35568899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .+++.+++++||+|++++|+|..+...++..|+++..++.+.++++++|++.+++.++++++++++++|+||||.+++.+
T Consensus       109 ~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~  188 (401)
T TIGR01264       109 EMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQ  188 (401)
T ss_pred             HHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999999886666788999999998888889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|+++|+++|+++|+||+|.++.+++....++..+....++|+++||||.|+++|+|+||++++++....  .++++
T Consensus       189 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~--~~~~~  266 (401)
T TIGR01264       189 HLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGIL--RDIRD  266 (401)
T ss_pred             HHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhH--HHHHH
Confidence            9999999999999999999999999887655555556655456999999999999999999999987522110  12444


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .++.......+++++.|.++..+|.+..++++++.++.++++++.+.+.|++++++. +..|.+|+|+|++++....++.
T Consensus       267 ~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~  345 (401)
T TIGR01264       267 GLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLR-PVMPSGAMYMMVGIEMEHFPEF  345 (401)
T ss_pred             HHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeeEEEEEecccccCCC
Confidence            444443223567889999999999764468899999999999999999999987776 4579999999999864211222


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      .++.+++..+++++||.+.||+.|+.++++||+++.+++++++++++|.+++++
T Consensus       346 ~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~~~~~  399 (401)
T TIGR01264       346 KNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQEFCER  399 (401)
T ss_pred             CCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence            246778888877889999999999878999999998899999999999998864

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=9.7e-54  Score=404.48  Aligned_cols=353  Identities=21%  Similarity=0.324  Sum_probs=296.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~  111 (415)
                      .+.++++|+.|+|.    +++++.+.+++.+.+.......|+++.|.++||+++|+|+.+.+|.+++++ +|++|+|+++
T Consensus        28 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~  103 (388)
T PRK07366         28 AGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE  103 (388)
T ss_pred             cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH
Confidence            46789999999975    667889999999887654456799889999999999999998889889998 6999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      ++..++.+++++||+|++++|+|+.+...++..|++++.++.++++++.+|++++++.+.++++++++++||||||.+++
T Consensus       104 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s  183 (388)
T PRK07366        104 GTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAP  183 (388)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCC
Confidence            99999999999999999999999999999999999999999877667888999998877778899999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCC-cccccccCCC-CCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      .+++++|+++|+++|++||+||+|.++.+++.. ..++..++.. +++|+++||||.|+++|+|+||+++++        
T Consensus       184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------  255 (388)
T PRK07366        184 LSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNA--------  255 (388)
T ss_pred             HHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCH--------
Confidence            999999999999999999999999999887643 3445454433 468999999999999999999999864        


Q ss_pred             HHHHHHHhhccc-cCCc-hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936          270 KVVERMKKYFDI-LGDP-ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL  347 (415)
Q Consensus       270 ~~~~~~~~~~~~-~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~  347 (415)
                      ++++.+...... ..+. +...+.++ ..+.. .++++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++.
T Consensus       256 ~li~~l~~~~~~~~~~~~~~~~~~a~-~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~~~~  331 (388)
T PRK07366        256 QLIQALRQVKAVVDFNQYRGILNGAI-AALTG-PQATVQQTVQIFRQRRDAFINALHQI-GWP-VPLPEATMYVWAKLPE  331 (388)
T ss_pred             HHHHHHHHHHhhcccCCCHHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeEEEEEECCc
Confidence            688888766432 2233 33344444 44432 25789999999999999999999988 676 4479999999999874


Q ss_pred             cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                      ..   ..++.+++..+++++||.+.||+.|+.  .+++||+++.+++++++++++|.++
T Consensus       332 ~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~  387 (388)
T PRK07366        332 PW---QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAF  387 (388)
T ss_pred             cc---CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence            21   013567778887888999999998875  5899999988899999999999875

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.2e-53  Score=401.61  Aligned_cols=359  Identities=20%  Similarity=0.297  Sum_probs=306.0

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~a  112 (415)
                      +.+.++|+.|+|+.   +++++.+.+++.+.+.......|+++.|.++||++|++++++.+|..+++ ++|++|+|++++
T Consensus        38 ~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a  114 (405)
T PRK06207         38 PGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA  114 (405)
T ss_pred             CCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence            56789999999762   35667888888888766545689998999999999999999988988888 899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc---CCCCCCCChhHHHhhcCCCceEEEecCCCCccccC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL---PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV  189 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~  189 (415)
                      +..++.+++++||+|++++|+|+.+...++..|.+++.++.+   +++++.+|++.|+++++++++++++++||||||.+
T Consensus       115 l~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~  194 (405)
T PRK06207        115 LFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVV  194 (405)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcC
Confidence            999999999999999999999999999999999999998875   23467899999999988889999999999999999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                      ++.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++       
T Consensus       195 ~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~-------  267 (405)
T PRK06207        195 YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP-------  267 (405)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH-------
Confidence            99999999999999999999999999999987755444444432 4689999999999999999999999865       


Q ss_pred             HHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936          269 PKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL  347 (415)
Q Consensus       269 ~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~  347 (415)
                       ++++.+..... ...+.+.+.|.++..+|++. ..+++++.+.++++++.+.+.|++++++. +..|.+|+|+|++++.
T Consensus       268 -~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~fl~~~l~~  344 (405)
T PRK06207        268 -AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVF-VRAPQAGSYLFPRLPR  344 (405)
T ss_pred             -HHHHHHHHHHhHhccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeEEEEEeCcc
Confidence             67787776643 33456778999999999753 35678888888999999999998887777 5478899999999974


Q ss_pred             cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      ..    .+..++...+++++||.+.||..|+.  ++++||+++.+++++++++++|.+++++++
T Consensus       345 ~~----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~  404 (405)
T PRK06207        345 LA----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERYR  404 (405)
T ss_pred             cC----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence            21    14677888877778999999998864  689999998889999999999999987653

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=2.4e-53  Score=402.79  Aligned_cols=352  Identities=27%  Similarity=0.444  Sum_probs=304.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a  112 (415)
                      +.++++|+.|.|+    +++++.+++++.+.+... ...|+++.|.++||+++++++++.+|..++++ +|++|+|++++
T Consensus        53 ~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~a  127 (413)
T PLN00175         53 KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEA  127 (413)
T ss_pred             cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHH
Confidence            4578999999986    566788999999888763 45899999999999999999998888888887 79999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.+++++||+|++++|+|..+...++..|++++.++.++++ +.+|++.|++.+.++++++++++||||||.++|.
T Consensus       128 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~  206 (413)
T PLN00175        128 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDELKAAFTSKTRAILINTPHNPTGKMFTR  206 (413)
T ss_pred             HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCH
Confidence            999999999999999999999999999999999999999986543 7899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++++++|+||+|..+.+++. ..++..+.. .+++|+++||||.|+++|+|+||+++++        ++
T Consensus       207 ~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~--------~l  277 (413)
T PLN00175        207 EELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP--------HL  277 (413)
T ss_pred             HHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH--------HH
Confidence            9999999999999999999999999988653 334444433 4689999999999999999999999865        67


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+..... ...+++.+.|.++..+|+.. +.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++..  
T Consensus       278 ~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~~f~~~~~~~~--  352 (413)
T PLN00175        278 TWGVRQAHSFLTFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEV-GFK-VYPSSGTYFVMVDHTPF--  352 (413)
T ss_pred             HHHHHHHHhhccCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeEEEEEecccc--
Confidence            777776643 35678889999999999764 5788999999999999999999987 677 55788999999987431  


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL-----KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                       +..++.+++..+++++||.+.||+.|+.     .+++||+++.+++++++++++|.++++
T Consensus       353 -~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        353 -GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLK  412 (413)
T ss_pred             -CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence             1124678888888888999999998852     469999999899999999999998775

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=6.6e-53  Score=402.21  Aligned_cols=373  Identities=25%  Similarity=0.397  Sum_probs=304.9

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .+.++++++.|+|... ++++++.+.+++.+.+.......|++..|.++||+++++|+++.+|+.+++++|++|+|++++
T Consensus        30 ~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a  108 (433)
T PRK06855         30 LGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA  108 (433)
T ss_pred             ccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence            4678999999998543 478899999999988765555689999999999999999999988989999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHH-HhCCCeEEEeeccCCCCCCCChhHHHhhcC--CCceEEEecCCCCccccC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSA-AFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNV  189 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~~  189 (415)
                      +..++. ++++||.|++++|+|+.+.... ...|++++.++.+++++|.+|+++|+++++  ++++++++++||||||.+
T Consensus       109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~  187 (433)
T PRK06855        109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAV  187 (433)
T ss_pred             HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcC
Confidence            999985 7799999999999999876543 456888888888766778899999999886  357889999999999999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      +|.+++++|+++|+++|++||+||+|..+.|.+....++..+..+.++|+++||||.|++||+|+||+++++......-.
T Consensus       188 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~  267 (433)
T PRK06855        188 YPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK  267 (433)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH
Confidence            99999999999999999999999999999987655556655544446899999999999999999999985311000000


Q ss_pred             HHHHHHHhhccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc
Q 014936          270 KVVERMKKYFDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS  348 (415)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~  348 (415)
                      .+.+.+........+++.+.|.++..++++.. +.++++.++.++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~w~~l~~~  346 (433)
T PRK06855        268 KYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK-VNRTNGAFYMTVVFEDG  346 (433)
T ss_pred             HHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-ccCCCeeEEEeeccccc
Confidence            23344433322234577899999999998654 67899999999999999999999887777 55899999999999753


Q ss_pred             cc--------C-------------C-CCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEee-CChhhHHHHHHHHHHH
Q 014936          349 LL--------D-------------D-IIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFA-VDPYSLEECLDRIKSF  404 (415)
Q Consensus       349 ~~--------~-------------~-~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-~~~~~l~~~l~~l~~~  404 (415)
                      ..        .             + ..++.+++..+++++||.+.||+.|+. ..++||+++ .++++|++++++|+++
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~  426 (433)
T PRK06855        347 VLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEK  426 (433)
T ss_pred             cccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHH
Confidence            10        0             0 013667888888899999999999975 357999997 5899999999999999


Q ss_pred             HHHH
Q 014936          405 YQRH  408 (415)
Q Consensus       405 ~~~~  408 (415)
                      +++.
T Consensus       427 ~~~~  430 (433)
T PRK06855        427 IEEY  430 (433)
T ss_pred             HHHH
Confidence            9764

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-52  Score=397.03  Aligned_cols=378  Identities=23%  Similarity=0.360  Sum_probs=315.5

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l   82 (415)
                      ++++.....++  .+..+.....+..   ..+.++++|+.|.|+    +++++.+.+++.+.+.... ..|++..|.+++
T Consensus         5 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~l   74 (387)
T PRK08960          5 YSRRSRDIEPF--HVMALLARANELE---AAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPAL   74 (387)
T ss_pred             hhhHHHhCCch--HHHHHHHHHHHHH---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHH
Confidence            45555555555  4555555444333   236789999999975    6678999999999887543 478888999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  162 (415)
                      |+++|+++++.+|.++++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|.++..++++.++++.+|
T Consensus        75 r~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  154 (387)
T PRK08960         75 REAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLT  154 (387)
T ss_pred             HHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCC
Confidence            99999999988888899999999999999999999999999999999999999999999999999999998766678899


Q ss_pred             hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (415)
Q Consensus       163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  242 (415)
                      ++.+++.++++++++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ..++...  .+++++++|
T Consensus       155 ~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S  231 (387)
T PRK08960        155 PALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNS  231 (387)
T ss_pred             HHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEee
Confidence            9999999988889999999999999999999999999999999999999999999887543 2233332  457999999


Q ss_pred             CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN  321 (415)
Q Consensus       243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  321 (415)
                      |||.|+++|+|+||+++++        ++++.+..... ...+++.+.|.++..++.+..+.++++.++.++++++.+.+
T Consensus       232 ~SK~~g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~  303 (387)
T PRK08960        232 FSKYFGMTGWRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLP  303 (387)
T ss_pred             cccccCCcccEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999975        67777776533 34567889999998888754457889999999999999999


Q ss_pred             HhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHHHH
Q 014936          322 KIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEECL  398 (415)
Q Consensus       322 ~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~~l  398 (415)
                      .|+++ ++.++..|.+|+|+|++++...    .++.+++.++++++||.+.||+.|+.   .+++|++++.+.+++++++
T Consensus       304 ~L~~~-~~~~~~~p~g~~f~~~~~~~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al  378 (387)
T PRK08960        304 ALREL-GFGIAVEPQGAFYLYADISAFG----GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAV  378 (387)
T ss_pred             HHHhc-CCcCCcCCCeeEEEEEeccccC----CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHH
Confidence            99987 6653346899999999986411    24677888888888999999999875   4699999988889999999


Q ss_pred             HHHHHHHH
Q 014936          399 DRIKSFYQ  406 (415)
Q Consensus       399 ~~l~~~~~  406 (415)
                      ++|+++++
T Consensus       379 ~~l~~~~~  386 (387)
T PRK08960        379 ERIARGLR  386 (387)
T ss_pred             HHHHHHHh
Confidence            99988764

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=8.1e-53  Score=399.33  Aligned_cols=388  Identities=22%  Similarity=0.340  Sum_probs=321.0

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |++++|+....++  ....+.+...+..   ..+.++++|+.|.|.    +++++.+.+++.+.+... ...|+++.|.+
T Consensus         4 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~   73 (402)
T PRK06107          4 FVPAARVSRIKPS--PSTAAAARARELR---AAGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERG-ETKYTLVNGTP   73 (402)
T ss_pred             hhhhHHhhhcCcc--HHHHHHHHHHHHH---hccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCCH
Confidence            4566666554444  3233332222221   236788999999975    556788999999988653 35799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      +||+++++++++.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..|...+...+..+..++.+.++++.
T Consensus        74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~  153 (402)
T PRK06107         74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFK  153 (402)
T ss_pred             HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCC
Confidence            99999999999888988899999999999999999999999999999999999999998888888888888876556678


Q ss_pred             CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc-CcEEEEccccCCcccCCCCcccccccCC--CCCe
Q 014936          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPI  237 (415)
Q Consensus       161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~  237 (415)
                      +|++.+++.++++++++++++|+||||.++|.+++++|+++|+++ ++++|+||+|+.+.+++....++..+..  .+++
T Consensus       154 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~v  233 (402)
T PRK06107        154 LTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRV  233 (402)
T ss_pred             CCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCE
Confidence            999999999988899999999999999999999999999999998 9999999999998887655555554432  3589


Q ss_pred             EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                      ++++||||.|+++|+|+||+++++        ++++.+..... ...+++.+.|.++..+|... +.++++.++.+++++
T Consensus       234 i~~~S~SK~~~~pGlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~  304 (402)
T PRK06107        234 LVTNGVSKTYAMTGWRIGYAAGPA--------DLIAAINKLQSQSSSCPSSISQAAAAAALNGD-QSFVTESVAVYKQRR  304 (402)
T ss_pred             EEEeccchhhcCcccceeeeecCH--------HHHHHHHHHHHhcccCCChHHHHHHHHHhcCC-hHHHHHHHHHHHHHH
Confidence            999999999999999999999865        67887777643 35678999999999999743 578899999999999


Q ss_pred             HHHHHHhhcCCCCcCCCCCCCceEEEEecCcc---c-cCC--CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCC
Q 014936          317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLS---L-LDD--IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVD  390 (415)
Q Consensus       317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~---~-~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~  390 (415)
                      +.+.+.|++++++. +..|++|+|+|++++..   . ..+  ..++.+++..+++++||.+.||..|+..+++||+++.+
T Consensus       305 ~~~~~~L~~~~g~~-~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~  383 (402)
T PRK06107        305 DYALALLNAIPGLS-CLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATS  383 (402)
T ss_pred             HHHHHHHhcCCCCc-ccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC
Confidence            99999999887777 55889999999987421   0 011  12467788888888999999999998889999999989


Q ss_pred             hhhHHHHHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       391 ~~~l~~~l~~l~~~~~~~  408 (415)
                      ++++++++++|+++++++
T Consensus       384 ~e~l~~~l~~l~~~l~~~  401 (402)
T PRK06107        384 LETLEEACARIERAVAAL  401 (402)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999988764

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=1.2e-52  Score=397.02  Aligned_cols=378  Identities=22%  Similarity=0.334  Sum_probs=309.4

Q ss_pred             ccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 014936            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (415)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~   81 (415)
                      +++++...+.++  ....+...+....   ..+.++++|+.|+|+    +++++.+.+++.+.+.......|++..|.++
T Consensus         4 ~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   74 (389)
T PRK08068          4 EPSELLKQLPKQ--FFASLVAKVNKKV---AEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPF   74 (389)
T ss_pred             chhhHhhhcCcc--HHHHHHHHHHHHH---hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHH
Confidence            455565555555  3344433322221   346678999999875    4556788999988877655568988899999


Q ss_pred             HHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           82 TRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      ||+++|+|+++.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|+++..++++.++++.
T Consensus        75 lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~  154 (389)
T PRK08068         75 LKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFL  154 (389)
T ss_pred             HHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCC
Confidence            99999999998888888998 89999999999999999999999999999999999999999999999999987666788


Q ss_pred             CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc-cccCCCCCeEE
Q 014936          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM-GVFGSTVPILT  239 (415)
Q Consensus       161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~  239 (415)
                      +|++++++.++++++++++++||||||.++|.+++++|+++|+++|+++|+||+|..+.+++....++ ...+..+++++
T Consensus       155 ~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~  234 (389)
T PRK08068        155 PDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIE  234 (389)
T ss_pred             CCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEE
Confidence            89999999887788999999999999999999999999999999999999999999988765333333 22333457899


Q ss_pred             EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  318 (415)
                      ++||||.|+++|+|+||+++++        ++++.+..... ...+.++..|.++..++... ..++++.++.++++++.
T Consensus       235 ~~S~SK~~g~~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~  305 (389)
T PRK08068        235 LYTLSKTFNMAGWRVAFAVGNE--------SVIEAINLLQDHLFVSLFGAIQDAAIEALLSD-QSCVAELVARYESRRNA  305 (389)
T ss_pred             EecchhccCCccceeEeEecCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHH
Confidence            9999999999999999999854        68888776643 23345556788777777543 47889999999999999


Q ss_pred             HHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHH
Q 014936          319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       319 l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~  396 (415)
                      +.+.|+++ ++. +..|.+|+|+|++++..     .++.++...+++++||.+.||..|+.  ++++||+++.+++++++
T Consensus       306 ~~~~L~~~-g~~-~~~~~g~~~~~v~~~~~-----~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~  378 (389)
T PRK08068        306 FISACREI-GWE-VDAPKGSFFAWMPVPKG-----YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLRE  378 (389)
T ss_pred             HHHHHHHC-CCc-ccCCCeeEEEEEECCCC-----CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHH
Confidence            99999988 776 55788899999998642     25678888887778999999998875  57999999888889999


Q ss_pred             HHHHHHHH
Q 014936          397 CLDRIKSF  404 (415)
Q Consensus       397 ~l~~l~~~  404 (415)
                      ++++|+++
T Consensus       379 al~~l~~~  386 (389)
T PRK08068        379 AVERIGKL  386 (389)
T ss_pred             HHHHHHHh
Confidence            99988753

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-52  Score=395.09  Aligned_cols=350  Identities=23%  Similarity=0.396  Sum_probs=300.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a  112 (415)
                      +.++++|+.|+|+    +++++.+.+++.+.+.......|+++.|.++||+++++|+++.+|..++++ +|++|+|++++
T Consensus        30 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~  105 (385)
T PRK09276         30 GVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEG  105 (385)
T ss_pred             CCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence            6778999999875    566788999999887654456899989999999999999998888878887 59999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.+++++||+|++++|+|+.+...++..|.+++.++.+.++++.+|++++++.+.++++++++++||||||.+++.
T Consensus       106 i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~  185 (385)
T PRK09276        106 IAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADL  185 (385)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999998666677889999998888889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++|+++|+||+|..+.+++....++..++. .+++|+++||||.|+++|+|+||+++++        ++
T Consensus       186 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~--------~l  257 (385)
T PRK09276        186 EFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA--------DL  257 (385)
T ss_pred             HHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH--------HH
Confidence            99999999999999999999999998887655555555543 3578999999999999999999999865        67


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+..... ...+.+.+.|.++..+|.. .+.++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++..  
T Consensus       258 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~v~~~~~--  332 (385)
T PRK09276        258 IAGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL-GLE-VEPPKATFYVWAPVPKG--  332 (385)
T ss_pred             HHHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEEECCCC--
Confidence            777776532 3345667788888888864 35788899999999999999999988 777 54788899999998742  


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                         .+..++..++++++||.+.||..|+.  ++++||+++.+++++.+++++|.+
T Consensus       333 ---~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~  384 (385)
T PRK09276        333 ---YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK  384 (385)
T ss_pred             ---CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence               25678888888788999999998875  479999999888999999998864

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=2.8e-52  Score=394.07  Aligned_cols=351  Identities=25%  Similarity=0.420  Sum_probs=302.6

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~  111 (415)
                      .++++++|+.|+|+    +++++.+.+++.+.+.......|+++.|.++||+++++|+++.+|..++++ +|++|+|+++
T Consensus        27 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~  102 (383)
T TIGR03540        27 EGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE  102 (383)
T ss_pred             cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence            46789999999975    566788999998887655556899999999999999999998888777876 6999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      ++..++.+++++||.|++++|+|+.+...++..|+++..++.+.++++.+|++++++.+.++++++++++||||||.+++
T Consensus       103 ~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~  182 (383)
T TIGR03540       103 GIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAP  182 (383)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCC
Confidence            99999999999999999999999999999999999999999876667788999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      .+++++|+++|+++|+++|+||+|.++.+.+....++..++. .+++|+++||||.|+++|+|+||+++++        +
T Consensus       183 ~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~--------~  254 (383)
T TIGR03540       183 LKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNA--------D  254 (383)
T ss_pred             HHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCH--------H
Confidence            999999999999999999999999998887655555555543 3578999999999999999999999864        6


Q ss_pred             HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      +++.+..... ...+++.+.|.++..+|.+. ..++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++.. 
T Consensus       255 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~~~~~~l~~~-  330 (383)
T TIGR03540       255 LIAGLGKVKTNVDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKI-GID-VEKPKATFYVWVPVPEG-  330 (383)
T ss_pred             HHHHHHHHHHhcccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-ecCCCcceEEEEECCCC-
Confidence            7777766543 23466778899999998764 6888899999999999999999998 777 54788899999998742 


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                          .+..++...+++++||.+.||..|+.  ++++||+++.+++++++++++|++
T Consensus       331 ----~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~  382 (383)
T TIGR03540       331 ----YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK  382 (383)
T ss_pred             ----CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence                25678888888888999999998875  479999999888999999998864

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=8e-52  Score=392.34  Aligned_cols=390  Identities=20%  Similarity=0.331  Sum_probs=314.4

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |+-+.+..+..++  ....... ....++  ..++++++|+.|+|+    +++++.+++++.+.+.......|+++.|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~-~~~~~~--~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~   71 (405)
T PRK09148          1 MEEFHRIRRLPPY--VFEQVNR-LKAAAR--AAGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIP   71 (405)
T ss_pred             CcchhhhhcCCcc--HHHHHHH-HHHHHH--hcCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCH
Confidence            5556666665554  2232222 222222  347789999999875    556788888888877554456899999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  159 (415)
                      +||+++|+++++.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|+++..++.+.++.+
T Consensus        72 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~  151 (405)
T PRK09148         72 GLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF  151 (405)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC
Confidence            999999999998888888887 8999999999999999999999999999999999999999999999999998665555


Q ss_pred             CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (415)
Q Consensus       160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i  238 (415)
                      ..++++..+...++++++++++||||||.++|.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .++++
T Consensus       152 ~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i  231 (405)
T PRK09148        152 FPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTV  231 (405)
T ss_pred             ccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEE
Confidence            44555544444467899999999999999999999999999999999999999999998887644444444432 34678


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD  317 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  317 (415)
                      +++||||.|+++|+|+||++++.        ++++.+..... ...+++.+.|.++..+|+. .+.++++.++.++++++
T Consensus       232 ~~~SfSK~~~~pGlR~G~~v~~~--------~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~  302 (405)
T PRK09148        232 EFTSMSKTFSMAGWRMGFAVGNE--------RLIAALTRVKSYLDYGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRD  302 (405)
T ss_pred             EEeccccccCCcchheeeeeCCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHH
Confidence            99999999999999999999864        68888876643 3456788899999999974 35788999999999999


Q ss_pred             HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHH
Q 014936          318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLE  395 (415)
Q Consensus       318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~  395 (415)
                      .+.+.|+++ ++. +..|++|+|+|++++.... + .+..++...+++++||.+.||..|+.  ++++||+++.++++++
T Consensus       303 ~l~~~L~~~-~~~-~~~p~~g~f~~~~l~~~~~-~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~  378 (405)
T PRK09148        303 VLVESFGRA-GWD-IPPPAASMFAWAPIPEAFR-H-LGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIR  378 (405)
T ss_pred             HHHHHHHHc-CCc-cCCCCeeEEEEEECCCccC-C-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHH
Confidence            999999987 676 5478999999999874210 1 13567888888788999999998865  5799999998899999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 014936          396 ECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       396 ~~l~~l~~~~~~~~~~~  412 (415)
                      +++++|.+++.++...+
T Consensus       379 ~al~~l~~~l~~~~~~~  395 (405)
T PRK09148        379 QAARNIKRFLSSADETL  395 (405)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999998776543

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=6.7e-52  Score=391.96  Aligned_cols=383  Identities=21%  Similarity=0.381  Sum_probs=311.8

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |+++++......+  .+....... .+..  ..++.+++|+.|+|+    +++++.+.+++.+.+... ...|+++.|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~-~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~   70 (388)
T PRK07337          1 MRLAARVDAIEPF--YVMELAKEA-QALE--RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLA   70 (388)
T ss_pred             CchhhHhHhcCch--HHHHHHHHH-HHHH--hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence            5666665443333  333333222 2221  246788999999975    556788999998887643 45799888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      ++|+++|+|+++.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+.++++.
T Consensus        71 ~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  150 (388)
T PRK07337         71 PLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQ  150 (388)
T ss_pred             HHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCc
Confidence            99999999999888888999999999999999999999999999999999999999999999999999999987666788


Q ss_pred             CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (415)
Q Consensus       161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (415)
                      +|++++++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+.+. ..+...+  .++++++
T Consensus       151 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~--~~~vi~~  227 (388)
T PRK07337        151 LTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSALSL--GDDVITI  227 (388)
T ss_pred             CCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcChhhc--cCCEEEE
Confidence            999999999988899999999999999999999999999999999999999999998887654 2222222  3578999


Q ss_pred             ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  319 (415)
                      +||||.|+++|+|+||+++++        ++++.+.... ....+.+.+.|.++..++......++++.++.++++++.+
T Consensus       228 ~S~SK~~~~~G~RiG~~~~~~--------~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~  299 (388)
T PRK07337        228 NSFSKYFNMTGWRLGWLVVPE--------ALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFI  299 (388)
T ss_pred             EechhhcCCchhheeeeecCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHH
Confidence            999999999999999999865        6777777664 3345678889999988887544455678889999999999


Q ss_pred             HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHH
Q 014936          320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~  396 (415)
                      .+.|+++ ++.....|++|+|+|++++....++..++.+++..+++++||.+.||..|+.   .+++||+++.+++++++
T Consensus       300 ~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~  378 (388)
T PRK07337        300 VPALESL-GFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEE  378 (388)
T ss_pred             HHHHHhc-CCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHH
Confidence            9999987 6552247899999999986421111225678888888889999999999875   57999999888999999


Q ss_pred             HHHHHHHHH
Q 014936          397 CLDRIKSFY  405 (415)
Q Consensus       397 ~l~~l~~~~  405 (415)
                      ++++|.+++
T Consensus       379 ~l~rl~~~l  387 (388)
T PRK07337        379 AVARLGKLF  387 (388)
T ss_pred             HHHHHHHHh
Confidence            999998764

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-51  Score=391.77  Aligned_cols=359  Identities=22%  Similarity=0.333  Sum_probs=298.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~  111 (415)
                      ++..+++|+.|+|+    ...++.+.+++.+.+.......|+++.|.++||+++|+|+++.+|+.++++ +|++|+|+++
T Consensus        31 ~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~  106 (403)
T PRK08636         31 AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKE  106 (403)
T ss_pred             cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHH
Confidence            46789999999876    334566777776665544457899999999999999999998889888988 7999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHH----HhhcC---CCceEEEecCCCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI----ESLAD---QNTVALVIINPGN  184 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l----~~~~~---~~~~~v~i~~p~n  184 (415)
                      ++.+++.+++++||+|++++|+|+.+...++..|+++..++.+.++++++|++.+    +++++   ++++++++++|||
T Consensus       107 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~N  186 (403)
T PRK08636        107 GYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHN  186 (403)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCC
Confidence            9999999999999999999999999999999999999999885555678887754    55553   4678999999999


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  263 (415)
                      |||.++|.+++++|+++|++|+++||+||+|+.+.+++....++..++. .+++|+++||||.|+++|+|+||+++++  
T Consensus       187 PTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~--  264 (403)
T PRK08636        187 PTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK--  264 (403)
T ss_pred             CCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH--
Confidence            9999999999999999999999999999999999887655555555543 2467889999999999999999999865  


Q ss_pred             CCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936          264 GMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM  342 (415)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~  342 (415)
                            ++++.+...... ..+.+.+.|.++..++.. .+.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|
T Consensus       265 ------~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~p~~g~~~~  335 (403)
T PRK08636        265 ------KLVGALKKIKSWLDYGMFTPIQVAATIALDG-DQSCVEEIRETYRKRRDVLIESFANA-GWE-LQKPRASMFVW  335 (403)
T ss_pred             ------HHHHHHHHHHHHhcccCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCcceEEE
Confidence                  677777766432 345667788887777753 36788899999999999999999987 676 55889999999


Q ss_pred             EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ++++.... + .++.+++..+++++||.+.||..|+.  .+++||+++.+++++++++++|+++++.+
T Consensus       336 ~~l~~~~~-~-~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~~  401 (403)
T PRK08636        336 AKIPEPAR-H-LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKKFLKEL  401 (403)
T ss_pred             EECCCccC-C-CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence            99974210 1 13577888888888999999998875  57999999988999999999999998763

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=1.3e-51  Score=390.75  Aligned_cols=348  Identities=24%  Similarity=0.377  Sum_probs=296.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCC-cEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPN-DVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~-~i~i~~g~~  110 (415)
                      .++++++|+.|+|+    +++++.+++++.+.+.  ....|+++.|.++||++||+|+++.+|.. ++++ +|++|+|++
T Consensus        27 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~  100 (396)
T PRK09147         27 ADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSR  100 (396)
T ss_pred             cCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChH
Confidence            47899999999975    5667889999988765  35689999999999999999999888887 8885 899999999


Q ss_pred             HHHHHHHHHhcCC---CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936          111 QAIDVAMALLSRP---GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG  187 (415)
Q Consensus       111 ~al~~~~~~l~~~---gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG  187 (415)
                      +++..++++++++   ||.|+++.|+|..+...++..|++++.+|.+++++|.+|++.+++.+.++++++++++||||||
T Consensus       101 ~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG  180 (396)
T PRK09147        101 EALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTG  180 (396)
T ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcC
Confidence            9999999999999   8999999999999999999999999999987777788999999888777899999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC-ccc-cc---ccC--CCCCeEEEccCccccCCCCceEEEEEee
Q 014936          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVP-MG---VFG--STVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~-~~---~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      .++|.+++++|+++|++|+++||+||+|..+.+++.. ..+ +.   ..+  ..+++|+++||||.|+++|+|+||++++
T Consensus       181 ~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~  260 (396)
T PRK09147        181 AVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGD  260 (396)
T ss_pred             ccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCC
Confidence            9999999999999999999999999999998876531 111 11   122  2368999999999999999999999986


Q ss_pred             CCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          261 DPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                      +        ++++.+..... ...+.+++.|.++.+.+..  +.++++.++.++++++.+.+.|++.  +. +..|.+|+
T Consensus       261 ~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~~g~  327 (396)
T PRK09147        261 A--------ALLKKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV--LD-VQLPDAGF  327 (396)
T ss_pred             H--------HHHHHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh--cC-CCCCCeeE
Confidence            5        67777766543 3456778888887777753  4788899999999999999999874  44 44799999


Q ss_pred             EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--------CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--------KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      |+|++++.       ++.+++..+++++||.+.||..|+.        .+++||+++.+++++++++++|.+++.
T Consensus       328 f~~~~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~  395 (396)
T PRK09147        328 YLWAKVPG-------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAECVEAAERIVDFCR  395 (396)
T ss_pred             EEEEECCC-------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence            99999872       4677888888888999999998752        479999999889999999999998763

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1e-51  Score=389.73  Aligned_cols=350  Identities=26%  Similarity=0.497  Sum_probs=299.2

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      .++++|+.|+|.    +++++.+.+++.+.... ....|+++.|.++||+++++++++.+|.++++++|++|+|+++++.
T Consensus        29 ~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~  103 (384)
T PRK06348         29 PDIIDLSLGDPD----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMY  103 (384)
T ss_pred             CCcEEcCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHH
Confidence            468999999875    55667777766555443 3468999999999999999999988898999999999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      +++.+++++||+|++++|+|..+...++..|.+++.++..+++++.+|++++++.++++++++++++||||||.++|.++
T Consensus       104 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~  183 (384)
T PRK06348        104 LALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKET  183 (384)
T ss_pred             HHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHH
Confidence            99999999999999999999999999999999999888765567889999999998888899999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      +++|+++|+++|+++|+||+|.++.+++. ..++..+.. .+++++++||||.|+++|+|+||+++++        ++++
T Consensus       184 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~--------~~~~  254 (384)
T PRK06348        184 LEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD--------YIIE  254 (384)
T ss_pred             HHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchhccCCccccceeeecCH--------HHHH
Confidence            99999999999999999999999988643 334444432 4689999999999999999999999965        6777


Q ss_pred             HHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          274 RMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       274 ~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      .+..... ...+++++.|.++..+|.. .+.++++.++.++++++.+.+.|++++++. +..|++|+|+|++++...   
T Consensus       255 ~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~~~~~~~~~---  329 (384)
T PRK06348        255 TAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIESIPNLS-LHPPKGSIYAFINIKKTG---  329 (384)
T ss_pred             HHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEecccCC---
Confidence            7766543 3466788999999999874 357788899999999999999999887776 557889999999986421   


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                       .++.+++..+++++||.+.||+.|+.  ++++||+++.+.+++++++++|++.
T Consensus       330 -~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~  382 (384)
T PRK06348        330 -LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM  382 (384)
T ss_pred             -CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence             25778888887788999999999875  5799999988899999999998764

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=7.5e-52  Score=400.18  Aligned_cols=373  Identities=24%  Similarity=0.434  Sum_probs=299.6

Q ss_pred             CcceeEecccCCC----------------CCC-C--------CCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHH
Q 014936           34 EKKVISLAMGDPT----------------VHS-C--------FHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAI   86 (415)
Q Consensus        34 ~~~~i~l~~g~~~----------------~~~-~--------~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~i   86 (415)
                      +.++|+|+.|+|+                ... +        ...+..+++++.+.+...  ....|+++.|.++||++|
T Consensus        45 ~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ai  124 (481)
T PTZ00377         45 FDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAV  124 (481)
T ss_pred             cceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHH
Confidence            5799999999995                211 0        001446777777666542  345799999999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhH
Q 014936           87 AEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDD  165 (415)
Q Consensus        87 a~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  165 (415)
                      |+|+++.+|+.+++++|++|+|+++++..++.+++ ++||.|+++.|+|+.|...++..|.+++.++.+++++|.+|++.
T Consensus       125 a~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~  204 (481)
T PTZ00377        125 AAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEE  204 (481)
T ss_pred             HHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHH
Confidence            99999888999999999999999999999999998 79999999999999999999999999999998777788999999


Q ss_pred             HHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC-CCccccc----ccCCC
Q 014936          166 IESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMG----VFGST  234 (415)
Q Consensus       166 l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~----~~~~~  234 (415)
                      |++.+++      +++++++++||||||.++|.+++++|+++|+++|++||+||+|..+.|++ ..+.++.    .+...
T Consensus       205 l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~  284 (481)
T PTZ00377        205 LEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAE  284 (481)
T ss_pred             HHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhccc
Confidence            9998864      68889999999999999999999999999999999999999999998853 3333332    22221


Q ss_pred             ----CCeEEEccCccc-cCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc------HH
Q 014936          235 ----VPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD------EV  303 (415)
Q Consensus       235 ----~~~i~~~s~sK~-~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~  303 (415)
                          .++|+++||||. ++++|+|+||+++.+     ..+++++.+........+++.++|.++..+|+...      +.
T Consensus       285 ~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~-----~p~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~  359 (481)
T PTZ00377        285 YNTDVELVSFHSTSKGIIGECGRRGGYFELTN-----IPPEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPL  359 (481)
T ss_pred             ccCCeEEEEEecCCcccccCCcCceEEEEEeC-----CCHHHHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHH
Confidence                368999999997 588999999998721     01268888877654345688899999999986411      12


Q ss_pred             H---HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc-cc------CCCCCHHHHHHHHHhhcCeEEEc
Q 014936          304 F---FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS-LL------DDIIDDIDFCFKLAKEESVIILP  373 (415)
Q Consensus       304 ~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~-~~------~~~~~~~~~~~~ll~~~gi~v~~  373 (415)
                      +   +++..+.++++++.+.+.|++++++. +..|++|+|+|++++.+ ..      .+..++..++..+++++||.+.|
T Consensus       360 ~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~p  438 (481)
T PTZ00377        360 YKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVP  438 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeC
Confidence            3   33344567899999999999988888 55899999999876421 00      00113456778888999999999


Q ss_pred             CCCCCC---CCeEEEEeeCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          374 GTAVGL---KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       374 g~~~~~---~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      |+.|+.   .+++|+|++.+++++++++++|.++++++.++.
T Consensus       439 G~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~~  480 (481)
T PTZ00377        439 GSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKKY  480 (481)
T ss_pred             CcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            999974   469999999888999999999999999887764

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.9e-51  Score=389.12  Aligned_cols=352  Identities=21%  Similarity=0.369  Sum_probs=298.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~  111 (415)
                      .+.++++|+.|+|.    .++++.+.+++.+.+.......|+++.|.++||+++|+|+++.++..++++ +|++|+|+++
T Consensus        33 ~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~  108 (394)
T PRK05942         33 QGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE  108 (394)
T ss_pred             cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence            46779999999875    344666777776666544456899999999999999999998888888888 5899999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      ++..++.+++++||+|++++|+|+.+...+...|++++.++++.+++|.+|++++++.+.++++++++++||||||.+++
T Consensus       109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s  188 (394)
T PRK05942        109 GLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAP  188 (394)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCC
Confidence            99999999999999999999999999998899999999999876667889999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      .+++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++|+++||||.|+++|+|+||+++++        +
T Consensus       189 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~--------~  260 (394)
T PRK05942        189 REFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR--------H  260 (394)
T ss_pred             HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH--------H
Confidence            999999999999999999999999998887654445544432 3467999999999999999999999865        6


Q ss_pred             HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      +++.++.... ...+.+..+|.++..+|+. .+.++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++.. 
T Consensus       261 l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~f~~~~~~~~-  336 (394)
T PRK05942        261 IIQGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGEL-GWN-IPPTKATMYLWVPCPVG-  336 (394)
T ss_pred             HHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeeEEEEECCCC-
Confidence            8888876643 3456778899999999964 35788899999999999999999887 676 54788899999998742 


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                          .++.++...+++++||.+.||..|+.  ++++||+++.+.+.+.+++++|.++
T Consensus       337 ----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~  389 (394)
T PRK05942        337 ----MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA  389 (394)
T ss_pred             ----CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence                24667777788889999999998864  5799999987788888888888764

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.3e-51  Score=388.45  Aligned_cols=387  Identities=28%  Similarity=0.452  Sum_probs=323.2

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |++|.++.+..++  .+........+..   ..+.++++|+.|+|.    +++++.+.+++.+.+.... ..|++..|..
T Consensus         2 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~   71 (393)
T PRK05764          2 MKLSKRVSRVTPS--ATLAVTAKAKELK---AQGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIP   71 (393)
T ss_pred             cchhhhhhhcCch--HHHHHHHHHHHHH---hccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChH
Confidence            6788888888777  4444443322222   336789999999975    5667899999998887543 4699888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      +||+.+++++.+.+|.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.++..++.++++++.
T Consensus        72 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  151 (393)
T PRK05764         72 ELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK  151 (393)
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence            99999999999888888899999999999999999999999999999999999999999999999999999987666788


Q ss_pred             CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc--CCCCCeE
Q 014936          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--GSTVPIL  238 (415)
Q Consensus       161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i  238 (415)
                      +|++.+++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+  +..++++
T Consensus       152 ~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i  231 (393)
T PRK05764        152 LTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTI  231 (393)
T ss_pred             CCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEE
Confidence            99999999998889999999999999999999999999999999999999999999988765443444443  2345799


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD  317 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  317 (415)
                      +++||||.|+++|+|+||++++.        ++++.+..... ....++++.|.++..+|+. .++++++.++.++++++
T Consensus       232 ~~~s~SK~~~~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~  302 (393)
T PRK05764        232 TVNGFSKAYAMTGWRLGYAAGPK--------ELIKAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRD  302 (393)
T ss_pred             EEecCcccccCccceeEEEecCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHH
Confidence            99999999999999999999754        67777766532 3457788999999999973 35788889999999999


Q ss_pred             HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHH
Q 014936          318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEEC  397 (415)
Q Consensus       318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~  397 (415)
                      .+.+.|++++++. +..|.+|+|+|++++........++.++...+++++||.+.||..|+.++++||+++.++++++++
T Consensus       303 ~l~~~L~~~~g~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~  381 (393)
T PRK05764        303 LMVDGLNEIPGLE-CPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEG  381 (393)
T ss_pred             HHHHHHhhCCCCc-ccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHH
Confidence            9999999987888 557888999999886532111113477888888888999999999887899999998899999999


Q ss_pred             HHHHHHHHHH
Q 014936          398 LDRIKSFYQR  407 (415)
Q Consensus       398 l~~l~~~~~~  407 (415)
                      +++|.+++++
T Consensus       382 i~~l~~~~~~  391 (393)
T PRK05764        382 LERIERFLES  391 (393)
T ss_pred             HHHHHHHHHh
Confidence            9999998865

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1.5e-51  Score=391.67  Aligned_cols=395  Identities=19%  Similarity=0.313  Sum_probs=314.1

Q ss_pred             ccccCCccCCcc-hhhHHHHHHHhhh-cccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-----------C
Q 014936            2 EISNGGIDNTGS-IITIKGMLSLLMQ-SVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-----------E   68 (415)
Q Consensus         2 ~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-----------~   68 (415)
                      .+|+|+...... ..+....+..+.. .+++..|+.++|+|+.+.+     ......+.+.+++....           .
T Consensus        12 ~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN-----~l~~d~l~~~~~~~~~~~~~~~~~~~~~~   86 (447)
T PLN02607         12 GLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAEN-----QVSFDLLEEYLKQHPEASSWGGKGAPGFR   86 (447)
T ss_pred             hhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhh-----hhhHHHHHHHHHhCchhhccccccccccc
Confidence            456666555532 1233344433343 4677788999999999984     44567777777664320           1


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHHhhhCC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCC
Q 014936           69 KFNGYAPTAGLPLTRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRH  145 (415)
Q Consensus        69 ~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g  145 (415)
                      .+..|.++.|.++||+++|+|++++++  ..+++++|++|+|+++++.+++.+++++||.|+++.|+|+.+...+. ..|
T Consensus        87 ~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g  166 (447)
T PLN02607         87 ENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG  166 (447)
T ss_pred             hhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCC
Confidence            234688889999999999999998776  35899999999999999999999999999999999999999987776 579


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV  219 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~  219 (415)
                      ++++.++.+.+++|.+|++.+++++++      ++++++++|||||||.++|.+++++|+++|+++|+++|+||+|+.+.
T Consensus       167 ~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~  246 (447)
T PLN02607        167 VKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSV  246 (447)
T ss_pred             cEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence            999999887667788999999988753      67899999999999999999999999999999999999999999988


Q ss_pred             cCCCCccccccc----C---CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHH
Q 014936          220 FGDKPFVPMGVF----G---STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAA  292 (415)
Q Consensus       220 ~~~~~~~~~~~~----~---~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  292 (415)
                      |++..+.++..+    +   ..+++++++||||.|+++|+|+||+++.+       +++.+.++.... ...++.++|.+
T Consensus       247 f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n-------~~l~~~~~~~~~-~~~~s~~~q~~  318 (447)
T PLN02607        247 FSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYN-------DKVVTTARRMSS-FTLVSSQTQHL  318 (447)
T ss_pred             cCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcC-------HHHHHHHHHHhh-cCCCCHHHHHH
Confidence            876555554432    1   14679999999999999999999999844       246666655433 23567889999


Q ss_pred             HHHhhCCCc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc-CCCCCHHHHHHHHHhhcCe
Q 014936          293 VPSILQQPD--EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL-DDIIDDIDFCFKLAKEESV  369 (415)
Q Consensus       293 ~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~-~~~~~~~~~~~~ll~~~gi  369 (415)
                      +..+|++..  +.++++.+++++++++.+.+.|++. ++. +..|.+|+|+|++++.... .....+.+++..+++++||
T Consensus       319 ~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~-~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV  396 (447)
T PLN02607        319 LASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIE-CLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKL  396 (447)
T ss_pred             HHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC-cccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCE
Confidence            999998753  3677888999999999999999987 777 5578999999999964211 0111234677788888899


Q ss_pred             EEEcCCCCCC--CCeEEEEeeC-ChhhHHHHHHHHHHHHHHHHHH
Q 014936          370 IILPGTAVGL--KNWLRVTFAV-DPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       370 ~v~~g~~~~~--~~~iRi~~~~-~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                      .+.||..|+.  ++|+||+++. +++++++++++|.+++++...+
T Consensus       397 ~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~~  441 (447)
T PLN02607        397 NISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKTA  441 (447)
T ss_pred             EEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHhh
Confidence            9999998865  7999999985 8999999999999999876543

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=1.9e-52  Score=368.93  Aligned_cols=349  Identities=28%  Similarity=0.442  Sum_probs=298.8

Q ss_pred             ecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHH
Q 014936           40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMA  118 (415)
Q Consensus        40 l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~  118 (415)
                      |+.|.|+    +++|+-+.+++++.+.....++|....|+++|++.|++.++..+|..+.+ ++|++|.|+.+++..++.
T Consensus        36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~  111 (420)
T KOG0257|consen   36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL  111 (420)
T ss_pred             ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence            9999875    88899999999999887767899999999999999999999977766555 579999999999999999


Q ss_pred             HhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc------CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          119 LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL------PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       119 ~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +++++||+|++.+|.|.+|....+..|..++.++..      ...+|.+|.+.++.++.++|++|++++||||||.+++.
T Consensus       112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR  191 (420)
T KOG0257|consen  112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR  191 (420)
T ss_pred             HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence            999999999999999999999999999999999876      34568899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      ++|++|+++|++||+++|.||+|.++.+++..+..+..+ +..++++.++|+||+|++.|||+||++.++        .+
T Consensus       192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~--------~L  263 (420)
T KOG0257|consen  192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--------HL  263 (420)
T ss_pred             HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--------Hh
Confidence            999999999999999999999999999999877766666 446789999999999999999999999954        34


Q ss_pred             HHHHHhh-ccccCCchhHHHHHHHHhhCCCc-------HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEE
Q 014936          272 VERMKKY-FDILGDPATFIQAAVPSILQQPD-------EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVML  343 (415)
Q Consensus       272 ~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~  343 (415)
                      ....... .+....+++..|.|.+.++....       ..+..++.+.++++|+.+.+.|+++ |+. +..|++++|+|+
T Consensus       264 ~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~-v~~p~gayyl~a  341 (420)
T KOG0257|consen  264 YSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLK-VTGPEGAYYLWA  341 (420)
T ss_pred             hhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCc-cccCCCceEEEE
Confidence            5555444 34446677778877777765432       1344559999999999999999999 999 669999999999


Q ss_pred             ecCcccc----C---CCCCHHHHHHHHHhhcCeEEEcCCCCCCC-------CeEEEEeeCChhhHHHHHHHHH
Q 014936          344 KLNLSLL----D---DIIDDIDFCFKLAKEESVIILPGTAVGLK-------NWLRVTFAVDPYSLEECLDRIK  402 (415)
Q Consensus       344 ~l~~~~~----~---~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-------~~iRi~~~~~~~~l~~~l~~l~  402 (415)
                      +++..+.    +   ...++-.+...++++.|+.+.|++.|+.+       +.+|+++..+++.++.++++|+
T Consensus       342 dfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~  414 (420)
T KOG0257|consen  342 DFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK  414 (420)
T ss_pred             eccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence            9972111    1   11246678899999999999999999874       3567777778889999998887

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-50  Score=381.72  Aligned_cols=356  Identities=24%  Similarity=0.371  Sum_probs=302.4

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAI  113 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~al  113 (415)
                      .++++|+.|.|+    +++++.+.+++.+.+.......|++..|.+++|+++++++++.+|+.++ +++|++|+|+++++
T Consensus        27 ~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l  102 (389)
T PRK05957         27 PGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAF  102 (389)
T ss_pred             CCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHH
Confidence            467999999975    6678889999998876544468999899999999999999988887777 78999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.+++++||+|++++|+|..+...++..|++++.++.+  .++.+|+++++++++++++++++++|+||||.++|.+
T Consensus       103 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~  180 (389)
T PRK05957        103 MNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEA  180 (389)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHH
Confidence            99999999999999999999999988889999999999874  4567999999999988899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++++|+++|+++|+++|+||+|.++.+++....+...+ +...++|+++||||.|+++|+|+||+++++        +++
T Consensus       181 ~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~~  252 (389)
T PRK05957        181 LLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI--------HLL  252 (389)
T ss_pred             HHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH--------HHH
Confidence            99999999999999999999999998865433333333 444689999999999999999999999865        688


Q ss_pred             HHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          273 ERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       273 ~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      +++..... ...+++.+.|.++..+|++. ..++++..+.++++++.+.+.|++++++..+..|.+|+|+|++++..   
T Consensus       253 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~---  328 (389)
T PRK05957        253 EAIKKIQDTILICPPVVSQYAALGALQVG-KSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTD---  328 (389)
T ss_pred             HHHHHHHhhcccCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCC---
Confidence            88877643 33566778999998898753 36788888899999999999999886642255788899999998642   


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEee-CChhhHHHHHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA-VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                        .++.+++..+++++||.+.||+.|+.  ++++||+++ .+++++++++++|.+.++++.+
T Consensus       329 --~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~  388 (389)
T PRK05957        329 --LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ  388 (389)
T ss_pred             --CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence              25778888888788999999998875  469999996 5789999999999999887543

>PRK07324 transaminase; Validated

Probab=100.00  E-value=5e-51  Score=382.71  Aligned_cols=363  Identities=23%  Similarity=0.402  Sum_probs=305.0

Q ss_pred             HHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCC
Q 014936           17 IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY   96 (415)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~   96 (415)
                      +.+.++......+....+.++++|+.|+|+    ++.++.+ +++.+++....+ .|++..|.++||++||+++.     
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----   76 (373)
T PRK07324          8 VEEWLNVYEKSATYDIAESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----   76 (373)
T ss_pred             HHHHHHHhhccCccccccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----
Confidence            344443333333333558899999999975    4555666 777777765444 89999999999999999984     


Q ss_pred             CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936           97 KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (415)
Q Consensus        97 ~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (415)
                      ++++++|++|+|+++++.+++.+++++||+|+++.|+|..+...++..|.+++.++++++++|.+|++++++.+++++++
T Consensus        77 ~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kl  156 (373)
T PRK07324         77 NVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKL  156 (373)
T ss_pred             CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcE
Confidence            36789999999999999999999999999999999999999999999999999999877777889999999998888999


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      +++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++...  .+++|+++||||.|+++|+|+||
T Consensus       157 i~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~  233 (373)
T PRK07324        157 ICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGW  233 (373)
T ss_pred             EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEE
Confidence            99999999999999999999999999999999999999999887643 2233322  35789999999999999999999


Q ss_pred             EEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          257 FVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +++++        ++++.++.... .+.+.+.++|.++..+|+. .+.++++.++.++++++.+.+.|++.+++. +..|
T Consensus       234 i~~~~--------~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p  303 (373)
T PRK07324        234 IAANE--------EVIDILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKP  303 (373)
T ss_pred             EecCH--------HHHHHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECC
Confidence            99854        68888877753 3456778889888888864 357788889999999999999999877777 4588


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .+|+++|+.++..     .++.+++.++++++||.+.||+.|+.++++||+++.+++.+++++++|+++++++
T Consensus       304 ~gg~~~~i~~~~~-----~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~  371 (373)
T PRK07324        304 KAVSTSFVKLDVD-----MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF  371 (373)
T ss_pred             CceEEEEEEeCCC-----CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            9999888888642     2577899998888999999999999889999999988999999999999998753

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=1.8e-50  Score=383.75  Aligned_cols=370  Identities=26%  Similarity=0.435  Sum_probs=298.8

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      ..++++++|+.|+|... ++++++.+.+++.+.+..  ...|+++.|.++||+++|+++.+....++++++|++|+|+++
T Consensus        30 ~~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~  106 (404)
T PRK09265         30 EEGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSE  106 (404)
T ss_pred             HcCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHH
Confidence            45779999999998743 366788888888876653  458999999999999999999864444789999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      ++..++.+++++||+|++++|+|..+...++..|.+++.++.+.++++.+|++++++.++++++++++++|+||||.+++
T Consensus       107 ~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~  186 (404)
T PRK09265        107 LIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYS  186 (404)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCC
Confidence            99999999999999999999999999999999999998888765556789999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      .+++++|+++|+++|+++|+||+|.++.+++....++..+..+.++++++||||.|+++|+|+||++++.+....  ..+
T Consensus       187 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~--~~~  264 (404)
T PRK09265        187 KELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHA--KGY  264 (404)
T ss_pred             HHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHH--HHH
Confidence            999999999999999999999999999887655555555555557899999999999999999999975321100  124


Q ss_pred             HHHHHhhccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+........+++.++|.++..+|..... ..+.+..+++.++++.+.+.|++++++. +..|.+|+|+|++++....
T Consensus       265 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~-~~~p~~g~~l~~~~~~~~~  343 (404)
T PRK09265        265 IEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVS-CVKPKGALYAFPKLDPKVY  343 (404)
T ss_pred             HHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCcceEEEEEeccccc
Confidence            4444333233456788899999999864321 1122223567788999999999887877 5589999999999874211


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                       +..++.+++.+++.++||.+.||..|+.  ++++|++++.+++++++++++|+++++++
T Consensus       344 -~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~~  402 (404)
T PRK09265        344 -PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLSGY  402 (404)
T ss_pred             -CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence             1123556677788889999999999863  68999999888999999999999988754

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=1.2e-50  Score=384.45  Aligned_cols=362  Identities=30%  Similarity=0.513  Sum_probs=302.3

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .+.++++|+.|.|... ++++++.+.+++.+.+... ...|+++.|.++||+++++|+++.+|+++++++|++|+|++++
T Consensus        28 ~~~~~i~l~~g~p~~~-~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a  105 (398)
T PRK08363         28 KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA  105 (398)
T ss_pred             cCCCeEEEeCCCCCcC-CCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            4679999999998532 3677899999999887653 3479888999999999999999888888999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.+++++||+|+++.|+|..+...++..|..++.++...++++.+|++.+++.++++++++++++||||||.+++.
T Consensus       106 l~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~  185 (398)
T PRK08363        106 LQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEK  185 (398)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCH
Confidence            99999999999999999999999999999999998887742233566789999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++++|+++|+++|+++|+||+|.++.+.+. ..++..+....++++++||||.|+++|+|+||+++.++.      +++
T Consensus       186 ~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~------~~~  258 (398)
T PRK08363        186 KTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPE------GKL  258 (398)
T ss_pred             HHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcH------HHH
Confidence            9999999999999999999999999887653 234445555567999999999999999999999972211      344


Q ss_pred             HHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc
Q 014936          273 ERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS  348 (415)
Q Consensus       273 ~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~  348 (415)
                      +.+...    .....+.+.+.|.++..+|.. .++++++.+++++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus       259 ~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~g~~~~~~~l~~~  336 (398)
T PRK08363        259 AEVREAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIS-TTKPQGAFYIFPRIEEG  336 (398)
T ss_pred             HHHHHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE-ecCCCeEEEEEEEeccC
Confidence            444332    122356788899999999864 357889999999999999999999887777 55788999999888641


Q ss_pred             ccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       349 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .   ..++.+++..+++++||.+.||..|+.  ++++||+++.+++++++++++|++++++.
T Consensus       337 ~---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~  395 (398)
T PRK08363        337 P---WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRER  395 (398)
T ss_pred             C---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence            1   114567777887889999999998875  47999999888899999999999988764

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=5.7e-51  Score=384.47  Aligned_cols=352  Identities=25%  Similarity=0.433  Sum_probs=300.9

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI  113 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al  113 (415)
                      +++++|+.|+|+    +++++.+.+++.+.+.. ....|++..|.+++|+++|+++++.+|..++++ +|++|+|+++++
T Consensus        20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al   94 (378)
T PRK07682         20 EGVISLGVGEPD----FVTPWNVREASIRSLEQ-GYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL   94 (378)
T ss_pred             CCeEEeCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence            468999999976    45567788888887764 345798889999999999999998888888886 899999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .+++.+++++||+|++++|+|+.+...++..|.++..++.+.++++.+|++++++++.++++++++++|+||||.++|.+
T Consensus        95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~  174 (378)
T PRK07682         95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS  174 (378)
T ss_pred             HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence            99999999999999999999999999999999999999876656788999999999988899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++++|+++|+++++++|+||+|..+.+++. ..++..+. ..+++++++||||.|+++|+|+||+++++        +++
T Consensus       175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~i  245 (378)
T PRK07682        175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--------YFS  245 (378)
T ss_pred             HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--------HHH
Confidence            999999999999999999999999998753 22333332 24689999999999999999999999865        678


Q ss_pred             HHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          273 ERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       273 ~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      +.+..... ...+++.+.|.++..+|++. +.++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|+.++...  
T Consensus       246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~g~~~~~~~~~~~~--  320 (378)
T PRK07682        246 EAMLKIHQYSMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPGGAFYAFPSISSTG--  320 (378)
T ss_pred             HHHHHHHHhhccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCCeeEEEEEeccCCC--
Confidence            87766543 23567889999999999764 3568888999999999999999988 777 557889999999875311  


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                        .++.++...+++++||.+.||..|+.  ++++||+++.+++++++++++|++++++
T Consensus       321 --~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~  376 (378)
T PRK07682        321 --LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVEN  376 (378)
T ss_pred             --CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence              25678888887788999999998875  5899999988899999999999998764

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=8.4e-51  Score=389.63  Aligned_cols=368  Identities=23%  Similarity=0.358  Sum_probs=297.7

Q ss_pred             cccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHh-----c------CCCCCCCCCCCcHHHHHHHHHHHhhhCC
Q 014936           27 SVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL-----S------EKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (415)
Q Consensus        27 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~-----~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~   95 (415)
                      .++...++.++|+|+.+.+.    ++ .+.+.+.+++...     .      ..+..|+++.|.++||++||+|++++++
T Consensus        30 ~y~~~~~p~g~i~L~~~En~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~  104 (468)
T PLN02450         30 PYDEIKNPSGIIQMGLAENQ----LS-FDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRG  104 (468)
T ss_pred             CCCcccCCCeeEEeehhHhH----hh-HHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhC
Confidence            46665667789999999853    22 2555555554321     0      1345699989999999999999998777


Q ss_pred             C--CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCCCChhHHHhhcCC
Q 014936           96 Y--KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLADQ  172 (415)
Q Consensus        96 ~--~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~  172 (415)
                      .  .+++++|++|+|+++++..++.+++++||.|++++|+|..+...+. ..|++++.++.+.++++.+|++.+++++++
T Consensus       105 ~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~  184 (468)
T PLN02450        105 NKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQ  184 (468)
T ss_pred             CCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHH
Confidence            4  4789999999999999999999999999999999999999988877 589999999987667788899999887753


Q ss_pred             ------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc---------CCCCCe
Q 014936          173 ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---------GSTVPI  237 (415)
Q Consensus       173 ------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---------~~~~~~  237 (415)
                            ++++++++|||||||.++|.+++++|+++|+++|+++|+||+|+.+.|++..+.++...         +..+++
T Consensus       185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~v  264 (468)
T PLN02450        185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRV  264 (468)
T ss_pred             HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcE
Confidence                  67899999999999999999999999999999999999999999988876444332221         134689


Q ss_pred             EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHH
Q 014936          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQS  315 (415)
Q Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~  315 (415)
                      ++++||||.|+++|+|+||++++++       .+.+.+..... ....+.++|.++..+|++..  ..++++.+++++++
T Consensus       265 i~l~S~SK~~~l~GlRiG~li~~~~-------~l~~~~~~~~~-~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~r  336 (468)
T PLN02450        265 HIVYSLSKDLGLPGFRVGAIYSNDE-------MVVSAATKMSS-FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQR  336 (468)
T ss_pred             EEEEeccccCCCCCccEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999751       24555554432 34568899999999998753  24788899999999


Q ss_pred             HHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC-CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEee-CCh
Q 014936          316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD-DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA-VDP  391 (415)
Q Consensus       316 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-~~~  391 (415)
                      ++.+.+.|+++ ++. +..|.+|+|+|++++..... ......+++..+++++||.+.||+.|+.  ++|+||+++ .++
T Consensus       337 r~~l~~~L~~~-gi~-~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~  414 (468)
T PLN02450        337 QKKLVSGLEAA-GIK-CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSE  414 (468)
T ss_pred             HHHHHHHHHHc-CCc-ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCH
Confidence            99999999998 777 55788999999998642111 1122356778888889999999998875  689999998 489


Q ss_pred             hhHHHHHHHHHHHHHHHH
Q 014936          392 YSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       392 ~~l~~~l~~l~~~~~~~~  409 (415)
                      +++++++++|++++.+..
T Consensus       415 ~~l~~~l~ri~~~l~~~~  432 (468)
T PLN02450        415 ETLDLAMKRLKSFVESDS  432 (468)
T ss_pred             HHHHHHHHHHHHHHHhcc
Confidence            999999999999987655

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.9e-50  Score=380.69  Aligned_cols=355  Identities=22%  Similarity=0.336  Sum_probs=297.5

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCC-cEEEeCChHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPN-DVFVTSGCTQ  111 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~-~i~i~~g~~~  111 (415)
                      +.++++|+.|+|+    +++++.+++++.+.+.......|++ .|.++||+++|+|+++.+|.. ++++ +|++|+|+++
T Consensus        43 ~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~  117 (410)
T PRK06290         43 DMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP  117 (410)
T ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence            5679999999975    5667889999888765444457886 899999999999999888887 8886 7999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      ++..++.+++++||.|+++.|+|+.+...++..|+++..++.+.++++.+|++++++.+.++++++++++||||||.++|
T Consensus       118 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s  197 (410)
T PRK06290        118 ALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVAT  197 (410)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999977667888999999988878999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      .+++++|+++|+++|++||+||+|.++.+++. ..++..+.. .+++|+++||||.|+++|+|+||+++++        +
T Consensus       198 ~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~--------~  268 (410)
T PRK06290        198 KEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE--------L  268 (410)
T ss_pred             HHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeCH--------H
Confidence            99999999999999999999999999887653 233333332 3568999999999999999999999865        6


Q ss_pred             HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      +++.+..... ...+.+.++|.++..+|++.  .++++.+++++++++.+.+.|+++ ++. +..|++|+|+|++++...
T Consensus       269 l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~f~l~v~lp~~~  344 (410)
T PRK06290        269 IVKAFATVKDNNDSGQFIAIQKAGIYALDHP--EITEKIREKYSRRLDKLVKILNEV-GFK-AEMPGGTFYLYVKAPKGT  344 (410)
T ss_pred             HHHHHHHHHhccccCCcHHHHHHHHHHhhCc--HHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCeeeEEEEECCCcc
Confidence            7777776643 23455668899999999763  678889999999999999999988 777 547889999999987532


Q ss_pred             cCC--CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHHHHH
Q 014936          350 LDD--IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       350 ~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ..+  ..+..++...++++.++.+.||..|+  +++||+++   .++++.++.++.|++.+.++
T Consensus       345 ~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~  406 (410)
T PRK06290        345 KSGIKFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV  406 (410)
T ss_pred             ccCCCCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence            111  12577888999888788888988664  79999997   46788899999998887653

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1.8e-50  Score=388.39  Aligned_cols=379  Identities=20%  Similarity=0.321  Sum_probs=299.4

Q ss_pred             hHHHHHHHhhhc-ccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHh-----------cCCCCCCCCCCCcHHHH
Q 014936           16 TIKGMLSLLMQS-VDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL-----------SEKFNGYAPTAGLPLTR   83 (415)
Q Consensus        16 ~~~~~~~~~~~~-~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~-----------~~~~~~y~~~~g~~~lr   83 (415)
                      +-.+.+..+... +++..+++.+|+|+.+.+.     ...+.+.+.+++...           ......|+++.|.++||
T Consensus        26 ~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~-----l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR  100 (496)
T PLN02376         26 EYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQ-----LCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFR  100 (496)
T ss_pred             chHHHHHHHhCCCCCcccCCCceEEeecchhh-----hhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHH
Confidence            344455545443 5665677789999999843     112333333333211           12335688889999999


Q ss_pred             HHHHHHHhhhCC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCC
Q 014936           84 RAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        84 ~~ia~~~~~~~~--~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~  160 (415)
                      ++||+|+++.+|  +.+++++|++|+|+++++..++.++++|||.|++++|+|+.+...+. ..|++++.++.+.+++++
T Consensus       101 ~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~  180 (496)
T PLN02376        101 QAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFK  180 (496)
T ss_pred             HHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCc
Confidence            999999998877  56899999999999999999999999999999999999999998776 589999999987666788


Q ss_pred             CChhHHHhhc------CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-
Q 014936          161 VDLDDIESLA------DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-  233 (415)
Q Consensus       161 ~~~~~l~~~~------~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-  233 (415)
                      ++++.+++++      ..+++++++++||||||.+++.+++++|+++|+++|+++|+||+|+.+.|.+..+.++..+.. 
T Consensus       181 ~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~  260 (496)
T PLN02376        181 LTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVND  260 (496)
T ss_pred             CCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhcc
Confidence            9999997653      236788999999999999999999999999999999999999999999888766555544411 


Q ss_pred             -------CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHH
Q 014936          234 -------TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVF  304 (415)
Q Consensus       234 -------~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~  304 (415)
                             .+++++++||||.|++||+|+||++++++       .+.+.++.... .+..+.++|.++..+|++..  +.+
T Consensus       261 ~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~-------~l~~~~~~~~~-~~~vs~~~Q~a~~~~L~d~~~~~~~  332 (496)
T PLN02376        261 VDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND-------SVVSCARKMSS-FGLVSSQTQLMLASMLSDDQFVDNF  332 (496)
T ss_pred             ccccccCCCeEEEEEeccccCCCCcceEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCChhHHHHH
Confidence                   13577899999999999999999998642       35555444333 34578899999999998743  356


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--C
Q 014936          305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGL--K  380 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~  380 (415)
                      +++.+++++++++.+.+.|++. ++. +..|.+|+|+|++++....  ....+..+++..++++.||.+.||+.|+.  +
T Consensus       333 l~~~r~~l~~r~~~l~~~L~~~-gi~-~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~  410 (496)
T PLN02376        333 LMESSRRLGIRHKVFTTGIKKA-DIA-CLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEP  410 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCC
Confidence            6777899999999999999987 777 4578999999999964211  11112467788888888999999999864  6


Q ss_pred             CeEEEEee-CChhhHHHHHHHHHHHHHHHH
Q 014936          381 NWLRVTFA-VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       381 ~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      +|+||+++ .+++++++++++|++++.+..
T Consensus       411 g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~  440 (496)
T PLN02376        411 GWFRICFANMDDDTLHVALGRIQDFVSKNK  440 (496)
T ss_pred             CEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence            89999998 588999999999999997644

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-50  Score=383.72  Aligned_cols=355  Identities=26%  Similarity=0.478  Sum_probs=304.4

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      .+++++|+.|+|.    +++++.+++++++.+... ...|.+..|.++||+++|+++++.+|.++++++|++|+|+++++
T Consensus        32 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al  106 (391)
T PRK08361         32 MENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEAT  106 (391)
T ss_pred             hcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHH
Confidence            3568999999975    555788999998887653 45788778999999999999998888889999999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.+++++||+|++++|+|..+...+...|++++.+++++++++.+|++.+++.++++++++++++|+||||.++|.+
T Consensus       107 ~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~  186 (391)
T PRK08361        107 YLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKE  186 (391)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHH
Confidence            99999999999999999999999999999999999999987766788999999999988899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|+++|+++++++|+||+|+++.+++....++..+.. +++++++||||.|+++|+|+||+++++        ++++
T Consensus       187 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~GlRiG~~~~~~--------~~~~  257 (391)
T PRK08361        187 VAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAP-DNTILANSFSKTFAMTGWRLGFVIAPE--------QVIK  257 (391)
T ss_pred             HHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCC-CCEEEEecCchhcCCcHhhhhhhccCH--------HHHH
Confidence            9999999999999999999999998876544444444332 578999999999999999999999865        5777


Q ss_pred             HHHhhcc-ccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          274 RMKKYFD-ILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       274 ~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      .+..... ..++.+.+.|.++..+|++.. ..++++.++.++++++.+.+.|++++++. +..|.+|+|+|++++...  
T Consensus       258 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~-~~~p~g~~~~~~~l~~~~--  334 (391)
T PRK08361        258 DMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIK-VFEPKGAFYVFANIDETG--  334 (391)
T ss_pred             HHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCe-ecCCCEEEEEEEECCCCC--
Confidence            7665532 345678889999999997643 35788999999999999999999987877 557889999999986421  


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                        .++.++...+++++||.+.||..|+.  ++++||+++.+++++++++++|++++++
T Consensus       335 --~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~  390 (391)
T PRK08361        335 --MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEE  390 (391)
T ss_pred             --CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence              25677888887778999999998875  5799999998889999999999988764

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.1e-50  Score=379.86  Aligned_cols=383  Identities=27%  Similarity=0.459  Sum_probs=312.0

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |+++.+.....++  .+........ ...  ..+.++++|+.|.|+    +++++.+.+++.+...  ....|++..|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~-~~~--~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~   69 (397)
T PRK07568          1 MKISKRVLNMPAS--PIRKLVPYAD-EAK--KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIP   69 (397)
T ss_pred             CchhhHhhhCCcc--hHHHHHHHHH-HHH--hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCH
Confidence            6777776655544  4444433211 111  124678999999965    5567889998877654  345799989999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      ++|++++++++ ..+.++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.++..++.+.++++.
T Consensus        70 ~lr~~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~  148 (397)
T PRK07568         70 ELREAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFH  148 (397)
T ss_pred             HHHHHHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence            99999999998 46778899999999999999999999999999999999999999998889999999999886545544


Q ss_pred             C-ChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936          161 V-DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (415)
Q Consensus       161 ~-~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i  238 (415)
                      . +++.++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. .++++
T Consensus       149 ~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i  228 (397)
T PRK07568        149 LPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVI  228 (397)
T ss_pred             CCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEE
Confidence            3 579999999888999999999999999999999999999999999999999999999887654445555543 56899


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  318 (415)
                      ++.||||.|+++|+|+||+++++       +++++.+........+++.+.|.++..+|+.. +.++++.++.++++++.
T Consensus       229 ~~~S~SK~~~~~G~R~G~~~~~~-------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~  300 (397)
T PRK07568        229 IIDSVSKRYSACGARIGCLISKN-------KELIAAAMKLCQARLSPPTLEQIGAAALLDTP-ESYFDEVREEYKKRRDI  300 (397)
T ss_pred             EEecchhhccCCCcceEEEecCC-------HHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHH
Confidence            99999999999999999999854       24666665543334577888999999999753 57888999999999999


Q ss_pred             HHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhh-----cCeEEEcCCCCCC-----CCeEEEEee
Q 014936          319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE-----ESVIILPGTAVGL-----KNWLRVTFA  388 (415)
Q Consensus       319 l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~iRi~~~  388 (415)
                      +.+.|++++++. +..|.+|+|+|++++.      .+..++...++++     +||.+.||..|+.     ++++||+++
T Consensus       301 l~~~L~~~~~~~-~~~p~g~~~~~~~l~~------~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~  373 (397)
T PRK07568        301 LYEELNKIPGVV-CEKPKGAFYIIAKLPV------DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV  373 (397)
T ss_pred             HHHHHhcCCCce-ecCCCcceEEEEecCC------CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe
Confidence            999999887776 5578999999999864      1466777777654     6999999998842     469999998


Q ss_pred             CChhhHHHHHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      .+++++++++++|.++++++..
T Consensus       374 ~~~~~~~~~~~~l~~~l~~~~~  395 (397)
T PRK07568        374 LNEEDLKRAMEILKEALEKYNK  395 (397)
T ss_pred             CCHHHHHHHHHHHHHHHHHhhc
Confidence            8889999999999999987653

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.5e-50  Score=380.35  Aligned_cols=353  Identities=28%  Similarity=0.445  Sum_probs=302.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      .+.+++|+.|+|+    +++++.+.+++.+.+.... ..|+++.|.+++|+++++++++.+|..+++++|++|+|+++++
T Consensus        23 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al   97 (382)
T PRK06108         23 REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQAL   97 (382)
T ss_pred             cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHH
Confidence            3568999999975    6778999999999887643 4699989999999999999998888889999999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC-CCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      ..++.+++++||+|+++.|+|..+...++..|++++.++.+.+ ++|.+|++.+++.++++++++++++|+||||.+++.
T Consensus        98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~  177 (382)
T PRK06108         98 MLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASR  177 (382)
T ss_pred             HHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCH
Confidence            9999999999999999999999999999999999999998653 457799999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccC-CCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      +++++|+++|+++|+++|+||+|.++.++ +....++..+ ...+++++++||||.|+++|+|+||+++++        +
T Consensus       178 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--------~  249 (382)
T PRK06108        178 DDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP--------A  249 (382)
T ss_pred             HHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH--------H
Confidence            99999999999999999999999999876 3333333333 234679999999999999999999999864        6


Q ss_pred             HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      +++.+..... ...+++.+.|.++..+|... ..++++.+++++++++.+.+.|++++++. +..|.+|+|+|++++.. 
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~~g~~~~~~l~~~-  326 (382)
T PRK06108        250 LGQVLEKLIEYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVE-VAKPDGAMYAFFRIPGV-  326 (382)
T ss_pred             HHHHHHHHHHhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCCC-
Confidence            7777766532 34567888999999999754 56788999999999999999999887888 54788999999988642 


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                          .+..+++..+++++||.+.||..|+.  .+++|++++.+++++++++++|+++++
T Consensus       327 ----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~  381 (382)
T PRK06108        327 ----TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA  381 (382)
T ss_pred             ----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence                24677888888888999999998864  589999998889999999999988764

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=3.1e-50  Score=379.38  Aligned_cols=349  Identities=23%  Similarity=0.410  Sum_probs=295.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~a  112 (415)
                      .+++++|+.|.|+    +++++.+.+++.+.+... ...|+++.|.+++|+.+++++++.+|...++ ++|++|+|++++
T Consensus        28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a  102 (384)
T PRK12414         28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG  102 (384)
T ss_pred             hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence            3568999999975    667888999998877653 3589998999999999999999888877665 689999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.+++++||+|+++.|+|..+...++..|.+++.++.+. +++.+|++.+++.++++++++++++||||||.+++.
T Consensus       103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~  181 (384)
T PRK12414        103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA  181 (384)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999998754 357799999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++        ++
T Consensus       182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--------~l  253 (384)
T PRK12414        182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--------EL  253 (384)
T ss_pred             HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--------HH
Confidence            99999999999999999999999999887654444544432 4579999999999999999999999865        67


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+..... ...+++.+.|.++..+|++.  .+..+.++.++++++.+.+.|++. ++. +..|.+|+|+|++++... 
T Consensus       254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~~~-  328 (384)
T PRK12414        254 MDEIRKVHQFMVFSADTPMQHAFAEALAEP--ASYLGLGAFYQRKRDLLARELAGS-RFE-LLPSEGSFFMLARFRHFS-  328 (384)
T ss_pred             HHHHHHHHhheecCCCcHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCcceEEEEcccccC-
Confidence            777777643 34677889999999999764  234567788999999999999987 677 557889999998875311 


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhhHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                       + .++.+++..+++++||.+.||+.|+.    .+++||+++.+++++++++++|.+
T Consensus       329 -~-~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~  383 (384)
T PRK12414        329 -D-ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS  383 (384)
T ss_pred             -C-CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence             1 14567787888889999999998853    479999998889999999999874

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-50  Score=351.89  Aligned_cols=355  Identities=24%  Similarity=0.405  Sum_probs=315.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +.++++.|..++.    +++.+|.+++|+++.++.+.. +|+  .+..++.++++.|+++++++.+.++-|++++|...+
T Consensus        23 g~~DvlPmWVADM----Df~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpg   95 (388)
T COG1168          23 GNEDVLPMWVADM----DFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPG   95 (388)
T ss_pred             CCCCcceeeeecc----cCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHh
Confidence            3478999999985    489999999999999987653 777  466889999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC-CCCCCCChhHHHhhcCCC-ceEEEecCCCCccccCC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQN-TVALVIINPGNPCGNVY  190 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~-~~~v~i~~p~nptG~~~  190 (415)
                      +..+++++.++||.|++..|.|+++.......|.++...|+.. .+.|.+|.++|++++... .++.++||||||||.++
T Consensus        96 i~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvw  175 (388)
T COG1168          96 ISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVW  175 (388)
T ss_pred             HHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccc
Confidence            9999999999999999999999999999999999999998763 455888999999988654 68999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC--CCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST--VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                      +.++|.+|.++|.+||+++|.||+|+++.+.|..+.++.+++..  ++.+.+.|.||+|..+|+++++++.+++      
T Consensus       176 t~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~------  249 (388)
T COG1168         176 TKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR------  249 (388)
T ss_pred             cHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH------
Confidence            99999999999999999999999999999999888887777654  7899999999999999999999999874      


Q ss_pred             HHHHHHHHhh-c-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEec
Q 014936          269 PKVVERMKKY-F-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKL  345 (415)
Q Consensus       269 ~~~~~~~~~~-~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l  345 (415)
                       ++..++... . .....+|.++..|..++.++ .+.|++...+.++.+++++.+.+++ +|++. +..|++.+.+|+++
T Consensus       250 -~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~-G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~gTYL~WLD~  326 (388)
T COG1168         250 -ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQ-GEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQGTYLAWLDC  326 (388)
T ss_pred             -HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCCCceeeeeec
Confidence             344444333 2 33468899999999999976 4699999999999999999999996 79999 66999999999998


Q ss_pred             CccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          346 NLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       346 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ..-.+    ++.+..+.++.+.+|.+.+|..||.  .+++|++++++.+.+++++++|+.++++
T Consensus       327 r~l~l----~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~  386 (388)
T COG1168         327 RELGL----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKK  386 (388)
T ss_pred             cccCC----ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhc
Confidence            76433    5677888899999999999999997  5899999999999999999999988865

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=4.6e-50  Score=379.81  Aligned_cols=346  Identities=26%  Similarity=0.408  Sum_probs=292.7

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC--CCCC-cEEEeCCh
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK--LTPN-DVFVTSGC  109 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~--~~~~-~i~i~~g~  109 (415)
                      .+.++++|+.|+|.    +++++.+++++++.+.  ....|+++.|.++||+++|+|+++.++..  ++++ +|++|+|+
T Consensus        26 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga   99 (393)
T TIGR03538        26 ASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT   99 (393)
T ss_pred             cCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence            47889999999975    5668899999988765  35689999999999999999999887765  6885 89999999


Q ss_pred             HHHHHHHHHHhcCCCCE--EEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936          110 TQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG  187 (415)
Q Consensus       110 ~~al~~~~~~l~~~gd~--vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG  187 (415)
                      ++++..++.+++++||+  |+++.|+|..+...++..|++++.++.+++++|.+|++++++++.++++++++++||||||
T Consensus       100 ~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG  179 (393)
T TIGR03538       100 REALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTG  179 (393)
T ss_pred             HHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcC
Confidence            99999999999999986  9999999999999999999999999987667788999999988877889999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccc-c---cccC--CCCCeEEEccCccccCCCCceEEEEEee
Q 014936          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVP-M---GVFG--STVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~---~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      .+++.+++++|+++|+++|++||+||+|..+.+++. ...+ +   ...+  ..+++|+++||||.|+++|+|+||++++
T Consensus       180 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~  259 (393)
T TIGR03538       180 AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGD  259 (393)
T ss_pred             cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecC
Confidence            999999999999999999999999999999887642 2222 1   1121  2468999999999999999999999986


Q ss_pred             CCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          261 DPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                      +        ++++.+..... ...+.+++.|.++...+..  ++++++.++.++++++.+.+.|+++  +. +..|.+|+
T Consensus       260 ~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~gg~  326 (393)
T TIGR03538       260 A--------EILKAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV--LD-LELPDAGF  326 (393)
T ss_pred             H--------HHHHHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh--Cc-ccCCCeeE
Confidence            5        67777776543 3456788888888777753  4788899999999999999999875  33 34799999


Q ss_pred             EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--------CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--------KNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                      |+|++++.       ++.++...+++++||.+.||+.|+.        .+++||+++.+++++++++++|.++
T Consensus       327 f~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~  392 (393)
T TIGR03538       327 YLWPKVPG-------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF  392 (393)
T ss_pred             EEEEECCC-------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence            99999862       4667888887888999999998752        4799999988899999999999864

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=8.4e-50  Score=377.38  Aligned_cols=378  Identities=24%  Similarity=0.284  Sum_probs=312.6

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l   82 (415)
                      +++|+..+.+.  .+.++...+....   ..+.+.++|+.|+|.    +++++.+.+++.+.+.......|++..|.++|
T Consensus         2 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~l   72 (386)
T PRK07550          2 LNPLIAALFPP--PIPEVRAWLAGYD---GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPEL   72 (386)
T ss_pred             cchhhhhcCCh--HHHHHHHHHHHHh---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHH
Confidence            45566665555  6667666433222   236679999999975    45678899999887755455689888899999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  162 (415)
                      |+++++++++..|..+++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|++++.++.++++++.+|
T Consensus        73 r~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~  152 (386)
T PRK07550         73 REAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPD  152 (386)
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCC
Confidence            99999999998888899999999999999999999999999999999999999999999999999999998766677789


Q ss_pred             hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEc
Q 014936          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLG  241 (415)
Q Consensus       163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~  241 (415)
                      ++.+++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++... +..+++++++
T Consensus       153 ~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (386)
T PRK07550        153 PAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLY  232 (386)
T ss_pred             HHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEe
Confidence            999999998889999999999999999999999999999999999999999999886543322222222 2345799999


Q ss_pred             cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY  320 (415)
Q Consensus       242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  320 (415)
                      ||||.|+++|+|+||+++++        ++++.+..... ...+++.++|.++..+++. .+++.++.++.++++++.+.
T Consensus       233 S~SK~~g~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~  303 (386)
T PRK07550        233 SFSKSYALTGHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFR  303 (386)
T ss_pred             cchhhccCcccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999865        57777766543 3456788899999999875 35778888899999999999


Q ss_pred             HHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEee-CChhhHHHH
Q 014936          321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA-VDPYSLEEC  397 (415)
Q Consensus       321 ~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-~~~~~l~~~  397 (415)
                      +.|+.++++. + .|.+|+|+|++++...    .++.+++..+++++||.+.||..|+.  ++++||+++ .++++++++
T Consensus       304 ~~L~~~~~~~-~-~~~g~~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~  377 (386)
T PRK07550        304 AVFARLPGWE-L-LASGAYFAYVRHPFPD----RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGEL  377 (386)
T ss_pred             HHHHhCCCce-e-CCCceEEEEecCCCCC----CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHH
Confidence            9998875665 3 5778999999886411    25778888888889999999998864  579999997 478999999


Q ss_pred             HHHHHHH
Q 014936          398 LDRIKSF  404 (415)
Q Consensus       398 l~~l~~~  404 (415)
                      +++|.++
T Consensus       378 ~~~l~~~  384 (386)
T PRK07550        378 VERLRAF  384 (386)
T ss_pred             HHHHHhh
Confidence            9999875

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=9.5e-50  Score=379.19  Aligned_cols=345  Identities=18%  Similarity=0.271  Sum_probs=284.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      +.++++|+.|+|+    +++++.+.+++.+.+...    ....|+++.|.++||+++|+|+.+.+|+++++++|++|+|+
T Consensus        33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga  108 (409)
T PRK07590         33 EAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGA  108 (409)
T ss_pred             CCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCH
Confidence            5679999999976    566788999998877641    34689888999999999999998888999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCe-----------EEEeeccCCCCCCCChhHHHhhcCCCceEEE
Q 014936          110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE-----------VRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (415)
Q Consensus       110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  178 (415)
                      ++++.++. .++++||+|++++|+|+.+...++..|.+           ++.+++++++++.++++      ++++++++
T Consensus       109 ~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~------~~~~k~i~  181 (409)
T PRK07590        109 KCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP------EEKVDIIY  181 (409)
T ss_pred             HHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc------ccCceEEE
Confidence            99999865 45689999999999999999999999986           88888765555555533      25789999


Q ss_pred             ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEE
Q 014936          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      +++||||||.+++.+++++|+++|+++|++||+||+|..+.+++....++..++. .+++|+++||||+|+++|+|+||+
T Consensus       182 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~  261 (409)
T PRK07590        182 LCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYT  261 (409)
T ss_pred             EeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEE
Confidence            9999999999999999999999999999999999999998876644445555543 347899999999999999999999


Q ss_pred             EeeCCCCCCChHHHHHH------------HHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936          258 VTTDPCGMFRKPKVVER------------MKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      ++++        ++++.            +..... ...+++.+.|.++..++....+.++++.++.++++++.+.+.|+
T Consensus       262 i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~  333 (409)
T PRK07590        262 VVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLE  333 (409)
T ss_pred             EcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9975        45542            111111 12357888999998888754457888999999999999999999


Q ss_pred             cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHH
Q 014936          325 EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIK  402 (415)
Q Consensus       325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~  402 (415)
                      .+ ++. +..|.+|+|+|++++..     .++.++...+++++||.+.||+.|+.  .+++||++..+++++++++++|+
T Consensus       334 ~~-~~~-~~~~~g~~f~wi~~~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~  406 (409)
T PRK07590        334 SA-GFE-VYGGVNAPYIWVKTPDG-----MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERIK  406 (409)
T ss_pred             hc-CCc-eecCCcceEEEEECCCC-----CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHHH
Confidence            87 676 44678999999999742     24667888888888999999998875  46999998778999999999998


Q ss_pred             HH
Q 014936          403 SF  404 (415)
Q Consensus       403 ~~  404 (415)
                      ++
T Consensus       407 ~~  408 (409)
T PRK07590        407 KA  408 (409)
T ss_pred             hh
Confidence            65

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=2.6e-49  Score=373.49  Aligned_cols=352  Identities=25%  Similarity=0.463  Sum_probs=299.9

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a  112 (415)
                      .+++++|+.|.|.    +++++.+++++.+.+... ...|++..|.++||+++++++++.+|+.++++ +|++|+|++++
T Consensus        27 ~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~a  101 (387)
T PRK07683         27 YDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEA  101 (387)
T ss_pred             cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHH
Confidence            4678999999875    566788999999987753 45898889999999999999998888888998 99999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +.+++.+++++||+|+++.|+|..+...++..|++++.++.+. +++.+|.+.+++.++++++++++++||||||.+++.
T Consensus       102 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~  180 (387)
T PRK07683        102 IDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSK  180 (387)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999998753 467788899999988889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++|+++|+||+|..+.+.+. ..++..+ +..+++++++||||.|++||+|+||++++.        ++
T Consensus       181 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~--------~l  251 (387)
T PRK07683        181 EELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPS--------YL  251 (387)
T ss_pred             HHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeeccccccCccceeEEEEcCH--------HH
Confidence            9999999999999999999999999887653 3344444 234579999999999999999999999865        67


Q ss_pred             HHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+...... ..+++.+.|.++..+|.+. +.++++.+++++++++.+.+.|++. ++. +..|.+|+|+|+.++... 
T Consensus       252 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~~~~~~~~~~~~~~-  327 (387)
T PRK07683        252 AKHILKVHQYNVTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISM-GLD-VEKPTGAFYLFPSIGHFT-  327 (387)
T ss_pred             HHHHHHHHHhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCeeEEEEEecccCC-
Confidence            7777655332 3456778899999999754 3578888899999999999999987 676 557889999998876311 


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                         .++.+++..+++++||.+.||..|+.  ++++||+++.+++++++++++|.+++++
T Consensus       328 ---~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~  383 (387)
T PRK07683        328 ---MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQ  383 (387)
T ss_pred             ---CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence               24667888888889999999998865  5899999988899999999999998865

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-49  Score=375.73  Aligned_cols=355  Identities=27%  Similarity=0.401  Sum_probs=298.5

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a  112 (415)
                      +..+++|+.|.|+    .+.++.+.+++.+.+... ...|+++.|.+++|+++++++++.+|..++++ +|++|+|++++
T Consensus        25 ~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a   99 (387)
T PRK08912         25 EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEA   99 (387)
T ss_pred             hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHH
Confidence            4578999999976    334577888887776543 45899999999999999999998888888998 99999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.+++++||+|+++.|+|+.+...++..|++++.++.++ +++.+|++.+++.+.++++++++++||||||.++|.
T Consensus       100 l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~  178 (387)
T PRK08912        100 LAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPR  178 (387)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCH
Confidence            9999999999999999999999999999999999999998753 357799999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++        ++
T Consensus       179 ~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~  250 (387)
T PRK08912        179 EELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP--------PL  250 (387)
T ss_pred             HHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH--------HH
Confidence            99999999999999999999999998887644444444432 4679999999999999999999999865        67


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+..... ...+.++..|.++..++.. .++++++.++.++++++.+.+.|+.. ++. +..|.+|+|+|++++....
T Consensus       251 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~g~~~l~~~l~~~~~  327 (387)
T PRK08912        251 LRVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRI-GFP-VLPSQGTYFLTVDLAPLGL  327 (387)
T ss_pred             HHHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEecccccCC
Confidence            777766543 2355666778888877753 35788899999999999999999988 777 5478889999998864110


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                        ..++.+++..+++++||.+.||..|+.    .+++|++++.+++++++++++|.+++++
T Consensus       328 --~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~  386 (387)
T PRK08912        328 --AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR  386 (387)
T ss_pred             --CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence              125677888888888999999998843    5799999998899999999999987753

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=3.6e-49  Score=373.00  Aligned_cols=353  Identities=24%  Similarity=0.449  Sum_probs=296.5

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAI  113 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al  113 (415)
                      +++++|+.|.|+    +++++.+.+++.+.+... ...|+++.|.+++|+++++++++.++..+.+ ++|++|+|+++++
T Consensus        30 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al  104 (391)
T PRK07309         30 PGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEAL  104 (391)
T ss_pred             CCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence            568999999976    555788899998877643 3479888999999999999999878877764 7999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVY  190 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~  190 (415)
                      .+++.+++++||+|++++|+|..+...++..|.++..++.+. +++.+|++.++++++.   +++++++++|+||||.++
T Consensus       105 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~  183 (391)
T PRK07309        105 SASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTY  183 (391)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCc
Confidence            999999999999999999999999999999999999998743 4567899999988863   578999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      +.+++++|+++|++||+++|+|++|.++.+++....++..+.. +++++++||||.|+++|+|+||+++++        +
T Consensus       184 s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~g~~GlRvG~~v~~~--------~  254 (391)
T PRK07309        184 SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLP-DQTILINGLSKSHAMTGWRIGLIFAPA--------E  254 (391)
T ss_pred             CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhcc-CCEEEEecChhhccCccceeEEEEeCH--------H
Confidence            9999999999999999999999999999986554445444433 679999999999999999999999865        6


Q ss_pred             HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      +++.+..... ...+++.++|.++..+|++.. .+....++.++++++++.+.|++. ++. +..|.+|+|+|++++...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~p~gg~~~~~~l~~~~  331 (391)
T PRK07309        255 FTAQLIKSHQYLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEKMTDL-GFK-IIKPDGAFYIFAKIPAGY  331 (391)
T ss_pred             HHHHHHHHHhhcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeEEEEEECCCCC
Confidence            7777776532 235678889999999997643 334567788899999999999987 677 557889999999887421


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                         ..++.+++..+++++||.+.||..|+.  +++|||+++.+.+++++++++|+++++++
T Consensus       332 ---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~  389 (391)
T PRK07309        332 ---NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEH  389 (391)
T ss_pred             ---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence               014567787888888999999998875  57999999888899999999999988664

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=1.4e-49  Score=375.33  Aligned_cols=350  Identities=23%  Similarity=0.361  Sum_probs=299.5

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a  112 (415)
                      +.++++|+.|.|+    +++++.+.+++++.+... ...|++..|.+++|+++++++++.++...+++ +|++|+|++++
T Consensus        29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a  103 (386)
T PRK09082         29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA  103 (386)
T ss_pred             hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence            4678999999875    556788999998887653 35799889999999999999998888777775 89999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.+++++||+|+++.|+|..+...++..|.+++.++.+. .++.+|++++++.++++++++++++|+||||.+++.
T Consensus       104 l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~  182 (386)
T PRK09082        104 LFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSA  182 (386)
T ss_pred             HHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999999864 357899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++|+++|+||+|.++.+++....++..+.. .+++++++||||.|+++|+|+||+++++        ++
T Consensus       183 ~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~--------~l  254 (386)
T PRK09082        183 ADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA--------AL  254 (386)
T ss_pred             HHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH--------HH
Confidence            99999999999999999999999999887654445544433 4689999999999999999999999865        67


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++..  
T Consensus       255 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~g~~~~~~~~~~~--  329 (386)
T PRK09082        255 SAEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS-RFK-LLPCEGTYFQLVDYSAI--  329 (386)
T ss_pred             HHHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCeeEEEEEecccc--
Confidence            787777642 3467888999999999864 35788889999999999999999986 777 55788999999998641  


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhhHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                      ++ .++.+++..+++++||.+.||+.|+.    .+++|++++.+++++++++++|++
T Consensus       330 ~~-~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~  385 (386)
T PRK09082        330 SD-LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ  385 (386)
T ss_pred             CC-CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence            11 25778888888899999999998753    479999998889999999999874

>PLN02231 alanine transaminase

Probab=100.00  E-value=2.5e-49  Score=382.27  Aligned_cols=366  Identities=22%  Similarity=0.357  Sum_probs=291.8

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhc--C-CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--E-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .++++|+.+.+.    ++.  .+++...+.+..  + ....|+++.|.++||++||+|+.++.|+.+++++|++|+|+++
T Consensus       129 p~~i~~~~~~~~----fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~  202 (534)
T PLN02231        129 PSLLDKSETHGL----FSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASP  202 (534)
T ss_pred             CccCCCCCcccc----CCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHH
Confidence            456777654422    332  444444455553  2 3567999999999999999999998899999999999999999


Q ss_pred             HHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCC
Q 014936          112 AIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN  184 (415)
Q Consensus       112 al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n  184 (415)
                      ++..++.+++ .+||.|+++.|+|+.|...+...|.+++.++.+++++|.+|+++|++.+++      ++++++++||+|
T Consensus       203 ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~N  282 (534)
T PLN02231        203 AVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGN  282 (534)
T ss_pred             HHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCC
Confidence            9999999998 479999999999999999999999999999987777799999999998754      578899999999


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC-CCCcccccccC-------CCCCeEEEccCcccc-CCCCceEE
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFG-------STVPILTLGSLSKRW-IVPGWRLG  255 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~-------~~~~~i~~~s~sK~~-~~~G~r~G  255 (415)
                      |||.+++.+++++|+++|+++|++||+||+|.++.|+ +..+.++..+.       .+.++++++||||.| +++|+|+|
T Consensus       283 PTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiG  362 (534)
T PLN02231        283 PTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGG  362 (534)
T ss_pred             CCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceE
Confidence            9999999999999999999999999999999999985 34444443331       123689999999975 78999999


Q ss_pred             EEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCC-----c-HH---HHHHHHHHHHHHHHHHHHHhhcC
Q 014936          256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP-----D-EV---FFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~-~~---~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      |+++.+.     ++++++.+........+++...|.++..+++..     . +.   +.++.++.++++++.+.+.|+++
T Consensus       363 y~~~~~~-----~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~  437 (534)
T PLN02231        363 YMEVTGF-----TSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL  437 (534)
T ss_pred             EEEEecC-----CHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9987420     135777776654444566778888888888642     1 22   23345789999999999999998


Q ss_pred             CCCcCCCCCCCceEEEEecC--cccc-----CCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHH
Q 014936          327 PCISCPHKPEGSMAVMLKLN--LSLL-----DDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       327 ~~~~~~~~p~~g~~~~~~l~--~~~~-----~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~  396 (415)
                      +++. +..|++|+|+|+++.  ....     .+...+..++.+++++.||.+.||+.|+.   ..++|+++..+++++++
T Consensus       438 ~gi~-~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~e  516 (534)
T PLN02231        438 EGVT-CNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPA  516 (534)
T ss_pred             CCce-ecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHH
Confidence            8888 558999999996553  2100     01123455678888889999999999985   34699999889999999


Q ss_pred             HHHHHHHHHHHHHHHh
Q 014936          397 CLDRIKSFYQRHAKQL  412 (415)
Q Consensus       397 ~l~~l~~~~~~~~~~~  412 (415)
                      ++++|.++++++.++.
T Consensus       517 al~RL~~~~~~~~~~~  532 (534)
T PLN02231        517 IVSRLTEFHKSFMDEF  532 (534)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999887765

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=9.2e-49  Score=367.78  Aligned_cols=338  Identities=24%  Similarity=0.370  Sum_probs=280.4

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.++++|+.|+|.    +++++.+.+++.+...  ....|+++.|.++||+++|+++++.+|..+++++|++|+|+++++
T Consensus        23 ~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al   96 (374)
T PRK05839         23 EYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVL   96 (374)
T ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence            6699999999975    5667888888887653  356899999999999999999999889889999999999999999


Q ss_pred             HHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          114 DVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       114 ~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      ..++.+++  ++||.|+++.|+|+.+...++..|++++.++.+.+++|.+|++..+  + .+++++++++||||||.+++
T Consensus        97 ~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~s  173 (374)
T PRK05839         97 FNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTLS  173 (374)
T ss_pred             HHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCcccC
Confidence            98888764  5789999999999999999999999999999876667777765443  2 36889999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc------CCCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF------GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  265 (415)
                      .+++++|+++|+++|+++|+||+|.++.+++ ...++...      ...+++|+++||||.|+++|+|+||+++++    
T Consensus       174 ~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~----  248 (374)
T PRK05839        174 LEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA----  248 (374)
T ss_pred             HHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH----
Confidence            9999999999999999999999999976433 22222211      123689999999999999999999999864    


Q ss_pred             CChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEe
Q 014936          266 FRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK  344 (415)
Q Consensus       266 ~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~  344 (415)
                          ++++.+..... ...+.+.+.|.++..++..  +.++++.+++++++++.+.+.|    ++.   .|.+|+|+|++
T Consensus       249 ----~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l----~~~---~p~gg~fi~~~  315 (374)
T PRK05839        249 ----SILKKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL----GIT---IPPATFYVWLP  315 (374)
T ss_pred             ----HHHHHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc----CCC---CCCeeEEEEEe
Confidence                67787776642 3456777888888877754  4778888999999998887765    333   68899999999


Q ss_pred             cCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          345 LNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       345 l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      ++        +..+++.++++++||.+.||..|+.    ++++||+++.+++++++++++|.++++
T Consensus       316 ~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        316 VD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE  373 (374)
T ss_pred             CC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence            86        3567888887778999999988764    489999998889999999999998764

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=1.9e-48  Score=368.20  Aligned_cols=353  Identities=26%  Similarity=0.409  Sum_probs=296.1

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a  112 (415)
                      ..+++||+.|.|+.    +.++.+.+++.+.+... ...|+++.|.+++|+++++++.+.+|..++++ +|++|+|++++
T Consensus        23 ~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a   97 (387)
T PRK07777         23 RTGAVNLGQGFPDE----DGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEA   97 (387)
T ss_pred             hCCeEEccCCCCCC----CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence            35789999999863    33466788887777653 35799889999999999999988888888786 79999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC-CCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      +..++.+++++||+|+++.|+|+.+...++..|.+++.++.++. +++.+|++++++.++++++++++++|+||||.+++
T Consensus        98 l~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~  177 (387)
T PRK07777         98 IAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLT  177 (387)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCC
Confidence            99999999999999999999999999999999999999988664 35779999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      .+++++|+++|+++++++|+||+|.++.+.+....++..+.. .+++++++||||.|+++|+|+||+++++        +
T Consensus       178 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~  249 (387)
T PRK07777        178 AAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA--------P  249 (387)
T ss_pred             HHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH--------H
Confidence            999999999999999999999999998886654445544432 4578999999999999999999999865        5


Q ss_pred             HHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          271 VVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       271 ~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      +++.+..... .....+.+.|.++..++... +.++++.++.++++++.+.+.|+++ ++. +..|.+++|+|++++...
T Consensus       250 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~g~~~~~~~~~~~~  326 (387)
T PRK07777        250 LIAAVRAAKQYLTYVGGAPFQPAVAHALDHE-DAWVAALRDSLQAKRDRLAAGLAEA-GFE-VHDSAGTYFLCADPRPLG  326 (387)
T ss_pred             HHHHHHHHHhhcccCCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhC-CCC-ccCCCcceEEEecccccC
Confidence            7777766543 23456777888888888653 5788889999999999999999987 777 547889999998875311


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL-----KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                         ..++.+++..+++++||.+.||..|+.     .+++||+++.+++++++++++|.++.
T Consensus       327 ---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~  384 (387)
T PRK07777        327 ---YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALR  384 (387)
T ss_pred             ---CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence               125678888888888999999998753     46899999889999999999998765

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=8.6e-49  Score=365.39  Aligned_cols=341  Identities=23%  Similarity=0.383  Sum_probs=288.4

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHH
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDV  115 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~  115 (415)
                      +++|+.|+|.    +++++.+.+++++...  ....|+++.|.++||+++++|+++.+|+.++++ +|++|+|+++++..
T Consensus         2 ~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~   75 (350)
T TIGR03537         2 LFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH   75 (350)
T ss_pred             eEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence            5899999875    6668889999988764  355799999999999999999998888889998 99999999999999


Q ss_pred             HHHHhcCCC---CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          116 AMALLSRPG---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       116 ~~~~l~~~g---d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      ++.+++++|   |+|+++.|+|..+...++..|++++.++.++++++.+|+++++++++++++++++++|+||||.+++.
T Consensus        76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~  155 (350)
T TIGR03537        76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR  155 (350)
T ss_pred             HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence            999999887   69999999999999999999999999998766678899999999988889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++++|+++|+++|+++|+||+|..+.+++ ...++..++ .+++++++||||.|+++|+|+||+++++        ++.
T Consensus       156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------~~~  225 (350)
T TIGR03537       156 SYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--------KLI  225 (350)
T ss_pred             HHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--------HHH
Confidence            999999999999999999999999877654 233333333 3589999999999999999999998754        577


Q ss_pred             HHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          273 ERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       273 ~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      +.++.... ...+.+++.|.++...+..  +.++++.+++++++++.+.+.|++. ++. +..|.+|+|+|++++..   
T Consensus       226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~g~~~~~~~~~~~---  298 (350)
T TIGR03537       226 SFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPDATFYLWVKVPSG---  298 (350)
T ss_pred             HHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeEEEEEEECCCC---
Confidence            77776532 3344555677877777754  4678888999999999999999987 777 55788899999998742   


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                        .++.+++..++ ++||.+.||..|+.  .+++|++++.+++++++++++|++
T Consensus       299 --~~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       299 --IDAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER  349 (350)
T ss_pred             --CCHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence              24667777775 46999999998865  589999998788999999998875

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=8.8e-49  Score=373.54  Aligned_cols=355  Identities=27%  Similarity=0.414  Sum_probs=305.0

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhc--CC-CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~-~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      ...++|+.|.|+.  .+.+...+.+++.+.++.  .. ...|.++.|.++||+.|++++...+|+.+++++|++|+|+++
T Consensus        89 ~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~  166 (459)
T COG1167          89 PSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ  166 (459)
T ss_pred             CceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence            7789999998764  255677788888777653  22 468888899999999999999988999999999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC--CCccccC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP--GNPCGNV  189 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p--~nptG~~  189 (415)
                      |++++++.+++|||+|++++|+|+.....++..|+++..+|++   +.++|++.|++.++.....+++++|  +||||.+
T Consensus       167 al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~t  243 (459)
T COG1167         167 ALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVT  243 (459)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCc
Confidence            9999999999999999999999999999999999999999985   3459999999998764333444455  8999999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      ||.+..++|+++|++||++||+||+|+.+.+++.+..++..++..++||+++||||+ .+||+|+||++++.        
T Consensus       244 ms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~--------  314 (459)
T COG1167         244 MSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP--------  314 (459)
T ss_pred             cCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH--------
Confidence            999999999999999999999999999999998888788888888999999999999 79999999999976        


Q ss_pred             HHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC-CCCcCCCCCCCceEEEEecC
Q 014936          270 KVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI-PCISCPHKPEGSMAVMLKLN  346 (415)
Q Consensus       270 ~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~p~~g~~~~~~l~  346 (415)
                      ++++.+.... ....+++.+.|.+++.++..+. +.+++++++.++++++.+.+.|++. |+...+..|.+|+|+|++++
T Consensus       315 ~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~  394 (459)
T COG1167         315 ELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELP  394 (459)
T ss_pred             HHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcC
Confidence            6788887764 4567889999999999998643 6899999999999999999999975 43333678999999999998


Q ss_pred             ccccCCCCCHHHHHHHHHhhcCeEEEc-CCCCCC----CCeEEEEee-CChhhHHHHHHHHHHHHHHHH
Q 014936          347 LSLLDDIIDDIDFCFKLAKEESVIILP-GTAVGL----KNWLRVTFA-VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~~----~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      ..     .+..++.... .++||.+.| |..|..    .+++|++++ .+++++++++++|.+++++..
T Consensus       395 ~~-----~~~~~l~~~a-~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~  457 (459)
T COG1167         395 EG-----IDARELLAAA-LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA  457 (459)
T ss_pred             CC-----CCHHHHHHHH-HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence            63     2566666665 456999998 888865    348999996 578999999999999998754

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=2.6e-48  Score=367.90  Aligned_cols=355  Identities=21%  Similarity=0.352  Sum_probs=295.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~  111 (415)
                      .++++++|+.|+|+    ..+++.+.+++.+.+.......|+++.|.++||+++++|+++.+|+.++++ ++++|+|+++
T Consensus        27 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~  102 (395)
T PRK08175         27 RGEDIIDFSMGNPD----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE  102 (395)
T ss_pred             cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence            36789999999876    334566777777776555557899999999999999999998888888887 8999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCCcccc
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGN  188 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~  188 (415)
                      ++..++..++++||+|++++|+|..+...++..|+++..++.+.++.   +.++++++++   ++++++++++|+||||.
T Consensus       103 ~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~  179 (395)
T PRK08175        103 GLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQ  179 (395)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCC
Confidence            99999999999999999999999999988899999999998865433   4777877665   36889999999999999


Q ss_pred             CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCC
Q 014936          189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR  267 (415)
Q Consensus       189 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  267 (415)
                      +++.+++++|+++|+++|+++|+||+|.++.+++....++..+.. .+++++++||||.|++||+|+||+++++      
T Consensus       180 ~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~------  253 (395)
T PRK08175        180 CVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP------  253 (395)
T ss_pred             CCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH------
Confidence            999999999999999999999999999998887655455544432 3568899999999999999999999854      


Q ss_pred             hHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecC
Q 014936          268 KPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLN  346 (415)
Q Consensus       268 ~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~  346 (415)
                        ++++.+..... ...+.+.+.|.++..++.. .+.++++.++.++++++.+.+.|+.+ ++. +..|.+|+|+|++++
T Consensus       254 --~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~~g~~i~i~l~  328 (395)
T PRK08175        254 --ELVSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWM-VEMPKASMYVWAKIP  328 (395)
T ss_pred             --HHHHHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCEEEEEEEECC
Confidence              68887776543 3456677788888888864 35778899999999999999999988 676 547889999999997


Q ss_pred             ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ....  ..++.+++..+++++||.+.||..|+.  ++++||+++.+++.+++++++|.+++++
T Consensus       329 ~~~~--~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~  389 (395)
T PRK08175        329 EPYA--AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRA  389 (395)
T ss_pred             cccC--CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence            5210  013577888888888999999998865  4699999988899999999999998864

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=6.1e-48  Score=365.97  Aligned_cols=344  Identities=20%  Similarity=0.277  Sum_probs=277.1

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .+.++++|+.|+|.    +++++.+.+++.+.+...    ....|++..|.++||+++|+++.+   ..+++++|++|+|
T Consensus        31 ~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~---~~~~~d~I~it~G  103 (402)
T TIGR03542        31 PSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYR---GRIDPEEIFISDG  103 (402)
T ss_pred             CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHh---cCCCHHHEEECCC
Confidence            36789999999865    566788999988877642    235798888999999999998633   1478999999999


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCC-----------eEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI-----------EVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      +++++.+++ .++.+||+|++++|+|..+...++..|+           ++..++.+.++++..+++.     ..+++++
T Consensus       104 a~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i  177 (402)
T TIGR03542       104 AKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDII  177 (402)
T ss_pred             cHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEE
Confidence            999999865 5568999999999999999999999999           8888887655555555322     1467899


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      ++++||||||.++|.+++++|+++|+++|++||+||+|..+.+++..+.++..++. .+++|+++||||.|++||+|+||
T Consensus       178 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~  257 (402)
T TIGR03542       178 YLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGW  257 (402)
T ss_pred             EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEE
Confidence            99999999999999999999999999999999999999998876543444444443 35789999999999999999999


Q ss_pred             EEeeCCCCCCChHHHH--------HHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          257 FVTTDPCGMFRKPKVV--------ERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                      +++++        +++        ..+.... ....+++.++|.++..++......++.+.++.++++++.+.+.|++. 
T Consensus       258 ~i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-  328 (402)
T TIGR03542       258 TVVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-  328 (402)
T ss_pred             EEecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            99975        333        2222221 22335788899998888876444566777788999999999999987 


Q ss_pred             CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                      ++. +..|.+|+|+|++++..     .++.+++..+++++||.+.||+.|+.  ++++||+++.+++++++++++|+++
T Consensus       329 ~~~-~~~~~~~~f~~v~l~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~  401 (402)
T TIGR03542       329 GFK-VYGGEHAPYLWVKTPEG-----ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA  401 (402)
T ss_pred             Cce-ecCCCceeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence            666 44667899999998742     25678888888888999999998865  5899999977899999999999865

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=4e-47  Score=356.28  Aligned_cols=355  Identities=22%  Similarity=0.309  Sum_probs=285.6

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |++|.|-......  .+..+.....      .++.++++|+.|+|.    .+.++.+++++.+...   ...|+++.|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~   65 (364)
T PRK07865          1 MPVSARLPDFPWD--TLAPAKATAA------AHPDGIVDLSVGTPV----DPVPPVIQEALAAAAD---APGYPTTAGTP   65 (364)
T ss_pred             CCccccCCCccHH--HHHHHHHHHH------hcCCCEEEcCCCCCC----CCCCHHHHHHHHHHHh---hCCCCCccCCH
Confidence            7788887777765  4444433221      235678999999865    4556888888877543   24799889999


Q ss_pred             HHHHHHHHHHhhhCCCC-CCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936           81 LTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~-~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  158 (415)
                      ++|+++++|+.+.+|.. +++++|++|+|+++++..++.++ +++||.|++++|+|+.+...++..|+++..++      
T Consensus        66 ~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~------  139 (364)
T PRK07865         66 ELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD------  139 (364)
T ss_pred             HHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC------
Confidence            99999999999988886 89999999999999999988888 69999999999999999999999999988764      


Q ss_pred             CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc---CCCC
Q 014936          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTV  235 (415)
Q Consensus       159 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~~~  235 (415)
                         ++++++.   .+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.....+...   ...+
T Consensus       140 ---~~~~l~~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~  213 (364)
T PRK07865        140 ---SLTELGP---QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHT  213 (364)
T ss_pred             ---ChhhCCc---ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccc
Confidence               1233322   467899999999999999999999999999999999999999999988765322222111   1235


Q ss_pred             CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ  314 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  314 (415)
                      ++++++||||.|+++|+|+||+++++        ++++.++... ....+.+.+.|.++..+|.+  .+++++.++.+++
T Consensus       214 ~~i~~~S~SK~~~~~GlRiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~  283 (364)
T PRK07865        214 GLLAVHSLSKQSNLAGYRAGFVAGDP--------ALVAELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYAR  283 (364)
T ss_pred             eEEEEeechhccCCCceeeEEEecCH--------HHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHH
Confidence            79999999999999999999999864        6777777653 33456788899999999875  4678888899999


Q ss_pred             HHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChh
Q 014936          315 SVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPY  392 (415)
Q Consensus       315 ~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~  392 (415)
                      +++.+.+.|++. ++. +..|.+|+|+|++++.       +..++... +.++||.+.||..|+.  ++++||+++.+++
T Consensus       284 ~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~-l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~  353 (364)
T PRK07865        284 RRAVLRPALEAA-GFR-VDHSEAGLYLWATRGE-------DCWDTVAW-LAERGILVAPGDFYGPAGAQHVRVALTATDE  353 (364)
T ss_pred             HHHHHHHHHHHc-CCc-ccCCCccEEEEEeCCC-------CHHHHHHH-HHHCCEEEeCccccCcCCCCEEEEEecCCHH
Confidence            999999999987 777 5478889999998742       34455554 4678999999998763  6799999987899


Q ss_pred             hHHHHHHHHH
Q 014936          393 SLEECLDRIK  402 (415)
Q Consensus       393 ~l~~~l~~l~  402 (415)
                      ++++++++|+
T Consensus       354 ~~~~~~~~l~  363 (364)
T PRK07865        354 RIAAAVERLA  363 (364)
T ss_pred             HHHHHHHHhh
Confidence            9999999885

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.9e-47  Score=357.81  Aligned_cols=380  Identities=24%  Similarity=0.377  Sum_probs=299.5

Q ss_pred             ccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHH
Q 014936            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPL   81 (415)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~   81 (415)
                      |.+..++.+....++.++....+ ...+.+..++++|+.|+|+    +++++.+.+++.+.+...  ....|++..|.++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~   77 (394)
T PRK06836          3 SEKIKGLLEKSSWIRKMFEEGAR-LKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPE   77 (394)
T ss_pred             chHHHHHHhcccHHHHHHHHHHH-HHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHH
Confidence            44444555554455555443221 1111235678999999865    566789999998877642  2468988899999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCC
Q 014936           82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (415)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (415)
                      +|+.+++++++.++.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|+++..++.+++ ++.+
T Consensus        78 lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~  156 (394)
T PRK06836         78 VREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQP  156 (394)
T ss_pred             HHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcC
Confidence            999999999988888889999999999999999999999999999999999999999999999999999998653 4679


Q ss_pred             ChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh------cCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK------LKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       162 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                      |+++++++++++++++++++|+||||.++|.+++++|+++|++      ||+++|+||+|.++.+++.....+..  ..+
T Consensus       157 d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~  234 (394)
T PRK06836        157 DLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYD  234 (394)
T ss_pred             CHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccC
Confidence            9999999998899999999999999999999999999999998      89999999999998876543333222  235


Q ss_pred             CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK  313 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  313 (415)
                      ++++++||||.|++||+|+||+++++..  ..-..+...+.....  .....++..|.++..++.+.      ..++.++
T Consensus       235 ~~i~~~S~SK~~~~pGlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~  306 (394)
T PRK06836        235 NSIVVYSFSKSLSLPGERIGYIAVNPEM--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYK  306 (394)
T ss_pred             cEEEEecchhhccCcceeeEEEecCHHH--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHH
Confidence            7999999999999999999999986511  000011222221111  11356778999999998752      1356778


Q ss_pred             HHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhh
Q 014936          314 QSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS  393 (415)
Q Consensus       314 ~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~  393 (415)
                      ++++.+.+.|+++ ++. +..|.+|+|+|++++.      .+..+++.. +.++||.+.||..|+.++++||+++.++++
T Consensus       307 ~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~------~~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~  377 (394)
T PRK06836        307 RNRDLLYDGLTEL-GFE-CVKPQGAFYLFPKSPE------EDDVAFCEK-AKKHNLLLVPGSGFGCPGYFRLSYCVDTET  377 (394)
T ss_pred             HHHHHHHHHHHhC-CCE-eecCCceEEEEEeCCC------CCHHHHHHH-HHhCCEEEECchhcCCCCeEEEEecCCHHH
Confidence            8899999999888 677 5578899999998864      146677654 567899999999998789999999989999


Q ss_pred             HHHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQRH  408 (415)
Q Consensus       394 l~~~l~~l~~~~~~~  408 (415)
                      +++++++|+++++++
T Consensus       378 ~~~~i~~l~~~l~~~  392 (394)
T PRK06836        378 IERSLPAFEKLAKEY  392 (394)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998754

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=5.2e-47  Score=360.79  Aligned_cols=390  Identities=20%  Similarity=0.326  Sum_probs=291.7

Q ss_pred             CCccCCcchhhHHHHHHHhhhcccccccC----cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 014936            6 GGIDNTGSIITIKGMLSLLMQSVDDEKNE----KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (415)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~   81 (415)
                      .+.+-.|...+|..-+..+....+. ..|    .++|+++.|.|+    +++++.+.++. +.+.. .  .|+++.|.++
T Consensus        68 ~~~~g~~~~~g~~~r~~~~~~~~~~-~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~-~--~Y~~~~g~~~  138 (527)
T PRK09275         68 GGLGGMPQKEGIEERFEAFLEEHKD-VPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG-D--NYPVPDRMLK  138 (527)
T ss_pred             CCcCCCcccccHHHHHHHHHHhCCC-CchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc-C--CCCCCCCCHH
Confidence            3455556666676666655544311 111    258999999975    77788888855 44432 2  5999999999


Q ss_pred             HHHHHHHHHhh-hCCCCC-C--CCcEEEeCChHHHHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHhCC--CeEEE
Q 014936           82 TRRAIAEYLSR-DLPYKL-T--PNDVFVTSGCTQAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFRH--IEVRH  150 (415)
Q Consensus        82 lr~~ia~~~~~-~~~~~~-~--~~~i~i~~g~~~al~~~~~~-----l~~~gd~vi~~~p~y~~~~~~~~~~g--~~~~~  150 (415)
                      +|++|++++.+ ..+... .  .++|++|+|+++++..++.+     ++++||+|++++|+|+.|...++..|  .+++.
T Consensus       139 lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~  218 (527)
T PRK09275        139 HTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVH  218 (527)
T ss_pred             HHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEE
Confidence            99999995544 333222 2  34999999999999999886     68999999999999999999888775  44555


Q ss_pred             eeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccc
Q 014936          151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPM  228 (415)
Q Consensus       151 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~  228 (415)
                      ++.+++++|.+|+++++++++++++++++++||||||.+++.+++++|+++|++  ++++||+||+|..+.+.   +.++
T Consensus       219 v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~  295 (527)
T PRK09275        219 INADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSL  295 (527)
T ss_pred             eecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCH
Confidence            555556779999999999998899999999999999999999999999999954  59999999999997642   2233


Q ss_pred             cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC----------------------ChH---HHHHHH----Hhh-
Q 014936          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF----------------------RKP---KVVERM----KKY-  278 (415)
Q Consensus       229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~----------------------~~~---~~~~~~----~~~-  278 (415)
                      ... ..+++|++.||||.|+++|||+||+++++....-                      .+|   .+++++    +.. 
T Consensus       296 ~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~  374 (527)
T PRK09275        296 FAV-LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVA  374 (527)
T ss_pred             HHh-CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHH
Confidence            222 2358999999999999999999999987631000                      000   012222    232 


Q ss_pred             ccccCCchhHHHHH-----HHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc---
Q 014936          279 FDILGDPATFIQAA-----VPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL---  350 (415)
Q Consensus       279 ~~~~~~~~~~~~~a-----~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~---  350 (415)
                      .+++.+.+.+.|.+     +.++|+. .+.+.+..++.++++++.+.+.|. + .+. ...|.+++|+|++++....   
T Consensus       375 ~~~t~~~s~p~Q~a~al~~~~all~~-~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~-~~~p~g~fY~~~di~~~~~~~~  450 (527)
T PRK09275        375 LNHTAGLSTPQQVQMALFSLFALLDE-EDAYKKAMKDIIRRRYKALYEGLG-L-PEP-EDPNNAAYYTLIDLEEWAEKNY  450 (527)
T ss_pred             HhhccCCCCHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHHHcC-C-CCc-CCCCCeeEEEEEEhHHhhhhcc
Confidence            33456778888876     3344543 457888999999999999988883 2 222 2368999999998864210   


Q ss_pred             --------CCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEee-CChhhHHHHHHHHHHHHHHHHHHh
Q 014936          351 --------DDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFA-VDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       351 --------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                              ....++.+++.+|+++.||.+.||+.|+. ++++|+|++ .+++++.++.++|.+++.++..+.
T Consensus       451 g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~~~  522 (527)
T PRK09275        451 GKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYEEY  522 (527)
T ss_pred             CchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                    00125788999999999999999999985 578999998 688999999999999999887764

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=3.3e-47  Score=364.19  Aligned_cols=339  Identities=17%  Similarity=0.207  Sum_probs=280.5

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +..+++|+.|.|.    .++.|.+.+++.+....  ...|+++.|.++||+.+++++++..+   .+++|++|+|+++++
T Consensus        84 ~~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al  154 (431)
T PRK15481         84 GTPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAI  154 (431)
T ss_pred             cchhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHH
Confidence            3467899999865    34446677877775542  35799999999999999999875322   457999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEec-CCCCccccCCCH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSY  192 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~  192 (415)
                      ..++.+++++||.|++++|+|+.+...++..|++++.++.+.+   ++|++.+++++++++++++++ +||||||.+++.
T Consensus       155 ~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~  231 (431)
T PRK15481        155 ERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSA  231 (431)
T ss_pred             HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCH
Confidence            9999999999999999999999999999999999999988432   489999999887788888887 999999999999


Q ss_pred             HHHHHHHHHHhhc-CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++ +++||+||+|.++.+.+.  .+.... ..+++++++||||.|+ +|+|+||+++++        ++
T Consensus       232 ~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--------~~  299 (431)
T PRK15481        232 RRAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASDS--------AT  299 (431)
T ss_pred             HHHHHHHHHHHhcCCceEEecCchhhhccCCC--CCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCCH--------HH
Confidence            9999999999999 999999999999876432  122111 2358999999999998 999999999865        67


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      ++.+..... ...+.+.+.|.++..+|++.. +.++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++.  
T Consensus       300 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~-~~~p~gg~f~~~~l~~--  375 (431)
T PRK15481        300 SARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA-IPSPGDGLNLWLPLDT--  375 (431)
T ss_pred             HHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCeEEEEEECCC--
Confidence            777765432 234578899999999998754 4678899999999999999999987 776 4479999999999863  


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee-CChhhHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA-VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~-~~~~~l~~~l~~l~~~~~  406 (415)
                           +..++...+ .++||.+.||..|+.   .+++||+++ .+++++++++++|++++.
T Consensus       376 -----~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        376 -----DSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN  430 (431)
T ss_pred             -----CHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence                 356666666 467999999998864   368999997 578999999999998764

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=3.3e-48  Score=364.52  Aligned_cols=349  Identities=30%  Similarity=0.531  Sum_probs=295.9

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI  113 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al  113 (415)
                      ++|||+.|++......++.+++.+++.+ .........|+++.|.+++|+++|+|+++..+..++++ +|++++|+++++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            5799999997644333355666666655 33344667999999999999999999997788888999 999999999999


Q ss_pred             HHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCcc
Q 014936          114 DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPC  186 (415)
Q Consensus       114 ~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~npt  186 (415)
                      ..+...+ .++||+|+++.|+|+.+...++..|+++..++...++++.+|+++|++.+++      +++++++++|+|||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt  161 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT  161 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence            9999999 7899999999999999999999999999999987678889999999998877      57899999999999


Q ss_pred             ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936          187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (415)
Q Consensus       187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  265 (415)
                      |.+++.+++++|+++|+++|+++|+||+|+.+.++.....+ ...+....+++++.|+||.|+++|+|+||+++++    
T Consensus       162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~----  237 (363)
T PF00155_consen  162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP----  237 (363)
T ss_dssp             TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH----
T ss_pred             ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh----
Confidence            99999999999999999999999999999999988654433 3445555669999999999999999999999965    


Q ss_pred             CChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcH--HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEE
Q 014936          266 FRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDE--VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVML  343 (415)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~  343 (415)
                          ++++.++........ +.+.+.++..++.+...  +++++.+++++++++++.+.|++. ++. +..+.+|+|+|+
T Consensus       238 ----~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~  310 (363)
T PF00155_consen  238 ----ELIERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GIT-VLPPEAGFFLWV  310 (363)
T ss_dssp             ----HHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSE-EEHHSBSSEEEE
T ss_pred             ----hhhhhhhhccccccc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhh-eeeccCccEEEE
Confidence                688888877553333 77888888888876432  388999999999999999999988 888 547779999999


Q ss_pred             ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHH
Q 014936          344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRI  401 (415)
Q Consensus       344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l  401 (415)
                      .++..      ++.++.++++++.||.+.||..|+.++++|+++ +.+++++++++++|
T Consensus       311 ~~~~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  311 RLDPN------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL  363 (363)
T ss_dssp             EESHH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred             Ecccc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence            88752      467888998877799999999999999999999 78999999999986

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=5.7e-47  Score=358.86  Aligned_cols=348  Identities=20%  Similarity=0.230  Sum_probs=272.3

Q ss_pred             cceeEecccCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE--EEeCChHH
Q 014936           35 KKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQ  111 (415)
Q Consensus        35 ~~~i~l~~g~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~i~~g~~~  111 (415)
                      .+++||+.|.|. ....++..+.+.+++.+.++......|+++.|.++||+++++|+.+..+..+++++|  ++|+|+++
T Consensus        26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~  105 (396)
T PRK09257         26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG  105 (396)
T ss_pred             cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence            468999999742 111133347899998887765455589999999999999999997654444578887  99999999


Q ss_pred             HHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCCcc
Q 014936          112 AIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPC  186 (415)
Q Consensus       112 al~~~~~~l--~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~npt  186 (415)
                      ++.++++++  +++||+|++++|+|+.+...++..|++++.++....+++++|++.+++.++   +++.++++++|||||
T Consensus       106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPT  185 (396)
T PRK09257        106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPT  185 (396)
T ss_pred             HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence            999998766  489999999999999999999999999999987433457899999998875   335666779999999


Q ss_pred             ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC-CCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEe--eCC
Q 014936          187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVT--TDP  262 (415)
Q Consensus       187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~--~~~  262 (415)
                      |.++|.+++++|+++|++||+++|+||+|..+.++ +....++..+. ..+++|+++||||.|+++|+|+||+++  +++
T Consensus       186 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~  265 (396)
T PRK09257        186 GADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDA  265 (396)
T ss_pred             CCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCH
Confidence            99999999999999999999999999999998864 22233333333 235799999999999999999999984  221


Q ss_pred             CCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCC
Q 014936          263 CGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCPH  333 (415)
Q Consensus       263 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~  333 (415)
                      ...   .++...+.... ....+++.+.|.++..+|.+..     ++++++.++.++++++.+.+.|+++.   ++. +.
T Consensus       266 ~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~-~~  341 (396)
T PRK09257        266 EEA---DRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFD-FI  341 (396)
T ss_pred             HHH---HHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-cc
Confidence            100   01333333332 2234568889999999997642     35677889999999999999999862   355 44


Q ss_pred             CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHH
Q 014936          334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSF  404 (415)
Q Consensus       334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~  404 (415)
                      .|.+|+|+|++++          .+++.++++++||.+.|.      +  ||+++ .+++++++++++|+++
T Consensus       342 ~p~gg~~~w~~l~----------~~~~~~l~~~~~V~~~p~------~--ri~~~~~~~~~i~~~~~~i~~~  395 (396)
T PRK09257        342 ARQRGMFSYSGLT----------PEQVDRLREEFGVYAVGS------G--RINVAGLNESNIDYVAEAIAAV  395 (396)
T ss_pred             cccceEEEecCCC----------HHHHHHHHHcCCEEEcCC------C--eEEEeeCCHHHHHHHHHHHHhh
Confidence            7999999998774          246677888999999873      2  99996 7999999999999875

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.3e-46  Score=350.19  Aligned_cols=350  Identities=20%  Similarity=0.298  Sum_probs=289.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      ++.++|+|+.|.+.    +++++.+.+++.+.+.......|+++.|.+++|+++|+++      ++++++|++|+|++++
T Consensus        26 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~a   95 (380)
T PRK06225         26 KDKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATES   95 (380)
T ss_pred             hcCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHH
Confidence            35679999999864    6778999999999987655668998889999999999998      5688899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc-CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      +..++.+++++||+|++++|+|..+...++..|.+++.++++ .++++.+|++.+++.++++++++++++|+||||.+++
T Consensus        96 l~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~  175 (380)
T PRK06225         96 LYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYT  175 (380)
T ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCC
Confidence            999999999999999999999999888889999999998864 3345789999999999888999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      .+++++|+++|+++|+++|+||+|..+..+.   .+...+. .++++++.||||.|+++|+|+||+++++        ++
T Consensus       176 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--------~l  243 (380)
T PRK06225        176 EEEIKEFAEIARDNDAFLLHDCTYRDFAREH---TLAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--------DL  243 (380)
T ss_pred             HHHHHHHHHHHHHCCcEEEEehhHHHHhccC---CchhhcC-CCCEEEEeechhhcCCccceeEEEecCH--------HH
Confidence            9999999999999999999999998765321   1122222 2578999999999999999999999865        67


Q ss_pred             HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      ++.+........+.+.++|.++..+|... ..+.++.++.++++++.+.+.|++++++.+...|.+|+|+|+.++...  
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~--  320 (380)
T PRK06225        244 IEVVKSIVINDLGTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG--  320 (380)
T ss_pred             HHHHHHHHhcccCCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc--
Confidence            77776654334567888888888888642 466777778888889999999998767542335778889999886421  


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                        .+..++...+. ++||.+.||..|+.   ++++|++++.+++++++++++|++++++++.
T Consensus       321 --~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~  379 (380)
T PRK06225        321 --IDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT  379 (380)
T ss_pred             --CCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence              24667777765 67999999976643   4699999998899999999999999987664

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=1.9e-46  Score=358.07  Aligned_cols=384  Identities=21%  Similarity=0.279  Sum_probs=287.9

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCC
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPT   76 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~   76 (415)
                      |.+|++|.++..- ..+......+.+..    ..+++++|+.|+|...  ..+.+.+.+++++.+...    ....|+++
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~   73 (416)
T PRK09440          1 MQFSKFGEKFTRH-SGITQLMDDLNDGL----RTPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGP   73 (416)
T ss_pred             CchhHHHHHHHhh-hcHHHHHHHHHHHh----cCCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCC
Confidence            6788888877665 24444444443333    2367899999998621  123456778887776542    23579999


Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----CCCEEEE-cCCCCcchHHHHHhCCC----
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----PGANILL-PRPGFPIYELSAAFRHI----  146 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~-----~gd~vi~-~~p~y~~~~~~~~~~g~----  146 (415)
                      .|.++||++||+|+++.+|.++++++|++|+|+++++.+++.++++     +||.|++ +.|+|+.|...+...+.    
T Consensus        74 ~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~  153 (416)
T PRK09440         74 QGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSY  153 (416)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeec
Confidence            9999999999999999889999999999999999999999999984     6899999 79999999886654432    


Q ss_pred             eEEEeeccCCC-CCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          147 EVRHFDLLPDK-GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       147 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      ....+++..+. ++.+|++.++  ..++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.... ..
T Consensus       154 ~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~  230 (416)
T PRK09440        154 RPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IF  230 (416)
T ss_pred             ccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-ch
Confidence            12222332211 3678999987  35678899999999999999999999999999999999999999997532110 00


Q ss_pred             ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc-HH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD-EV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~  303 (415)
                      ..... ...+++|+++||||. +++|+|+||+++++        ++++.+..... ...+++.+.|.++..+|++.. ..
T Consensus       231 ~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~  300 (416)
T PRK09440        231 SEATP-LWNPNIILCMSLSKL-GLPGVRCGIVIADE--------EIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLR  300 (416)
T ss_pred             hhcCc-cccCCeEEEeccccc-CCCcceEEEEeCCH--------HHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHH
Confidence            01101 114689999999996 99999999999865        67788776643 345678999999999998743 13


Q ss_pred             HHHH-HHHHHHHHHHHHHHHhhc-CCC--CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC
Q 014936          304 FFKK-TLNLLKQSVDICYNKIKE-IPC--ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL  379 (415)
Q Consensus       304 ~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~  379 (415)
                      +..+ .++.++++++.+.+.|++ +++  +. +..|.+|+|+|++++...    .++.++...+ .++||.+.||+.|+.
T Consensus       301 ~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~-~~~p~gg~fiw~~~~~~~----~~~~~~~~~l-~~~gV~v~pg~~F~~  374 (416)
T PRK09440        301 LSETVIRPFYRQKVQLAIALLRRYLPDEPCL-IHKPEGAIFLWLWFKDLP----ITTEELYQRL-KARGVLVVPGHYFFP  374 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCCeE-EecCCCceEEEEECCCCC----CCHHHHHHHH-HHCCEEEechHhhCC
Confidence            3333 567778888888888875 333  33 347889999999987421    1456666654 678999999998843


Q ss_pred             ---------CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936          380 ---------KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       380 ---------~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                               .+++||+++.+++++++++++|++++++..+
T Consensus       375 ~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~~~~  414 (416)
T PRK09440        375 GLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEVEKAYA  414 (416)
T ss_pred             CCccccCCcCceEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence                     2589999987899999999999999987554

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-46  Score=355.33  Aligned_cols=347  Identities=16%  Similarity=0.192  Sum_probs=269.7

Q ss_pred             CcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE--EeCChH
Q 014936           34 EKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF--VTSGCT  110 (415)
Q Consensus        34 ~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~--i~~g~~  110 (415)
                      +++++||+.|.| +..+...+.+.+.+++.+.+.......|+++.|.++||+++|+|+.+..+..+++++|+  .|+|++
T Consensus        28 ~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~  107 (404)
T PTZ00376         28 SPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGT  107 (404)
T ss_pred             CcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcc
Confidence            457899999985 32222223455666655544334456899999999999999999965544457889998  499999


Q ss_pred             HHHHHHHH---HhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCC
Q 014936          111 QAIDVAMA---LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGN  184 (415)
Q Consensus       111 ~al~~~~~---~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~n  184 (415)
                      +++..++.   +++++||+|++++|+|+.|...++..|++++.++..+++++++|++.+++.++   ++++++++++|||
T Consensus       108 ~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~N  187 (404)
T PTZ00376        108 GALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHN  187 (404)
T ss_pred             hHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence            99988875   56799999999999999999999999999999998544568899999998874   3457778899999


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC--CcccccccC-CCCCeEEEccCccccCCCCceEEEEEe--
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVT--  259 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~--  259 (415)
                      |||.+++.+++++|+++|++|++++|+||+|.++.+++.  ...++..+. ..+++++++||||.|+++|+|+||+++  
T Consensus       188 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~  267 (404)
T PTZ00376        188 PTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVC  267 (404)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEe
Confidence            999999999999999999999999999999999888541  122233332 234799999999999999999999842  


Q ss_pred             eCCCCCCChHHHHH----HHHhhc-cccCCchhHHHHHHHHhhCCCc--H---HHHHHHHHHHHHHHHHHHHHhhcCC--
Q 014936          260 TDPCGMFRKPKVVE----RMKKYF-DILGDPATFIQAAVPSILQQPD--E---VFFKKTLNLLKQSVDICYNKIKEIP--  327 (415)
Q Consensus       260 ~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~---~~~~~~~~~~~~~~~~l~~~l~~~~--  327 (415)
                      .+       +++.+    .+.... ....+.++++|.++..+|++..  +   .++++.+++++++++.+.+.|++++  
T Consensus       268 ~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~  340 (404)
T PTZ00376        268 AN-------KEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSP  340 (404)
T ss_pred             CC-------HHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            22       23433    333322 2234457789999999997632  2   2355667789999999999999862  


Q ss_pred             -CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHH
Q 014936          328 -CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       328 -~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~  405 (415)
                       ++. +..|.+|+|+|++++          .+++.+|++++||.+.||      +  ||+++ .+.++++.++++|++++
T Consensus       341 ~~~~-~~~p~gg~f~~~~~~----------~~~~~~L~~~~~v~v~p~------~--Ris~~~~~~~~~~~~~~~l~~~~  401 (404)
T PTZ00376        341 GDWE-HIINQIGMFSFTGLT----------KEQVERLIEKYHIYLLDN------G--RISVAGLTSKNVDYVAEAIHDVV  401 (404)
T ss_pred             Cccc-ccccCceEEEecCCC----------HHHHHHHHHhCCEeecCC------C--eEEEeccCHHhHHHHHHHHHHHH
Confidence             244 347899999998763          467888988889999997      1  99996 89999999999999886


Q ss_pred             H
Q 014936          406 Q  406 (415)
Q Consensus       406 ~  406 (415)
                      .
T Consensus       402 ~  402 (404)
T PTZ00376        402 R  402 (404)
T ss_pred             h
Confidence            5

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.6e-46  Score=348.93  Aligned_cols=328  Identities=20%  Similarity=0.335  Sum_probs=274.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.++++|+.|++.    +++++.+.+++.+.+..  ...|++ .|.++||+++|+++      ++++++|++|+|+++++
T Consensus        29 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al   95 (357)
T PRK14809         29 PDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGAL   95 (357)
T ss_pred             ccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            5679999999865    66788899999887653  457876 68899999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++++++++||.|++++|+|..+...++..|.++..++++.++++.++++.+++.. ++++++++++||||||.++|.+
T Consensus        96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~  174 (357)
T PRK14809         96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLD  174 (357)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHH
Confidence            999999999999999999999988888888999999998866567778888887765 3578999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|+++|++ ++++|+||+|.++.+.+.   .+..+...+++++++||||.|+++|+|+||+++++        ++++
T Consensus       175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~~~  242 (357)
T PRK14809        175 EVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EWAD  242 (357)
T ss_pred             HHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HHHH
Confidence            99999999975 789999999999875432   22233445689999999999999999999999975        6778


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+..... .+..+.++|.++..+|.+  +.++++.++.++++++.+.+.|+..     . .|.+|+|+|++++       
T Consensus       243 ~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~g~f~~~~~~-------  306 (357)
T PRK14809        243 AYARVNT-PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAP-----T-WESAGNFVLAEVG-------  306 (357)
T ss_pred             HHHHhCC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCc-----c-CCCCCCEEEEECC-------
Confidence            7776543 456788888888888864  5788888999999999999888653     2 3678899999874       


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                       +..++...+ .++||.+.||..|+.++++||+++. .+++++++++|+++++
T Consensus       307 -~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        307 -DASAVAEAA-QERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA  356 (357)
T ss_pred             -CHHHHHHHH-HHCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence             356676664 6789999999999888999999974 6899999999988764

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=6.3e-46  Score=373.29  Aligned_cols=355  Identities=14%  Similarity=0.268  Sum_probs=285.2

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~  111 (415)
                      .+.++++|+.|+|.    +++++.+++++.+.+....   +  ..|.+++++++++++++++|+..++ ++|++++|+++
T Consensus       695 ~g~~vI~LsinE~d----~ppPp~V~eAi~eal~~~~---~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e  765 (1082)
T PLN02672        695 QESSLIHMDVDESF----LPVPSAVKASIFESFVRQN---I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA  765 (1082)
T ss_pred             CCCCEEEEeCCCCC----CCCCHHHHHHHHHHHhhcC---C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence            36789999999965    7889999999998775322   2  2356789999999999988988765 58999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCC-CccccC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPG-NPCGNV  189 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~-nptG~~  189 (415)
                      ++..++.+++++||.|+++.|+|+.|...++..|++++.++.+++++|.+|++.+++++++ ..+++++++|+ ||||.+
T Consensus       766 lL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v  845 (1082)
T PLN02672        766 LFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLL  845 (1082)
T ss_pred             HHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCcc
Confidence            9999999999999999999999999999999999999999987667899999999999876 35689999997 999999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc--cccc----ccCC---CCCeEEEccCccccCCCCceEEEEEee
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMG----VFGS---TVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~----~~~~---~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      ++.+++++|+++|++||++||+||+|.++.|++...  .++.    .++.   ..++++++||||.|+++|+|+||++++
T Consensus       846 ~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap  925 (1082)
T PLN02672        846 YSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALN  925 (1082)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeC
Confidence            999999999999999999999999999988875431  1111    1111   237999999999999999999999986


Q ss_pred             CCCCCCChHHHHHHHHhhccccCCchhHHHHHHH---HhhC--CCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYFDILGDPATFIQAAVP---SILQ--QPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~---~~l~--~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      +       +++++.+...... ..+....|.++.   .++.  ... ..++.+.++.++++++++.+.|+++ ++. +..
T Consensus       926 ~-------~eLi~~l~~~~~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~-v~~  995 (1082)
T PLN02672        926 D-------SVLIDAFHSAPGL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWD-VLE  995 (1082)
T ss_pred             C-------HHHHHHHHHhhhh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-Eec
Confidence            5       1377777664321 222223343333   3332  111 3567788888999999999999988 777 558


Q ss_pred             CCCceEEEEecCccc-------cC----C-CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSL-------LD----D-IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIK  402 (415)
Q Consensus       335 p~~g~~~~~~l~~~~-------~~----~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~  402 (415)
                      |++|+|+|++++...       .+    + ..++.++...++++.||.+.||..|+.++++||+++.+++++++++++|+
T Consensus       996 PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL~ 1075 (1082)
T PLN02672        996 PQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAIA 1075 (1082)
T ss_pred             CCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHHH
Confidence            999999999764210       00    0 12577899999888899999999888889999999999999999999999


Q ss_pred             HHHH
Q 014936          403 SFYQ  406 (415)
Q Consensus       403 ~~~~  406 (415)
                      ++.+
T Consensus      1076 kf~~ 1079 (1082)
T PLN02672       1076 RFKE 1079 (1082)
T ss_pred             HHHH
Confidence            8654

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.1e-45  Score=343.29  Aligned_cols=331  Identities=21%  Similarity=0.303  Sum_probs=271.4

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~i~~g~~  110 (415)
                      .++..+++|+.|+|.    +++++.+.+++.+...   ...|+++.|.++||+++++++.+++|.. +++++|++|+|++
T Consensus        18 ~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~   90 (357)
T TIGR03539        18 SHPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTK   90 (357)
T ss_pred             hCCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChH
Confidence            346778999999875    5567888888877643   3579999999999999999999988886 9999999999999


Q ss_pred             HHHHHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccC
Q 014936          111 QAIDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV  189 (415)
Q Consensus       111 ~al~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~  189 (415)
                      +++..++..+ .++||.|++++|+|+.+...++..|++++.++         +++.+.   .++++++++++|+||||.+
T Consensus        91 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~~~v~~~~p~NPtG~~  158 (357)
T TIGR03539        91 ELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGPDLIWLNSPGNPTGRV  158 (357)
T ss_pred             HHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCccEEEEeCCCCCcCcc
Confidence            9999998887 69999999999999999999999999887663         222222   2468899999999999999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc---CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF  266 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  266 (415)
                      ++.+++++|+++|+++|+++|+||+|.++.+++.....+...   ...+++++++||||.|+++|+|+||+++++     
T Consensus       159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~-----  233 (357)
T TIGR03539       159 LSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP-----  233 (357)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH-----
Confidence            999999999999999999999999999888765322222110   123578999999999999999999999764     


Q ss_pred             ChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEec
Q 014936          267 RKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL  345 (415)
Q Consensus       267 ~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l  345 (415)
                         ++++.+..... ...+++.+.|.++..+|++  ..++++.++.++++++++.+.|++. ++. +..|.+|+|+|+++
T Consensus       234 ---~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~p~~~~~~~~~~  306 (357)
T TIGR03539       234 ---ALVAELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKA-GFR-IDHSEAGLYLWATR  306 (357)
T ss_pred             ---HHHHHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCC-CcCCCccEEEEEEC
Confidence               67777765543 2456788899999999865  4677888899999999999999987 677 55788999999987


Q ss_pred             CccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHH
Q 014936          346 NLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRI  401 (415)
Q Consensus       346 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l  401 (415)
                      +.       +..++... |.++||.+.||..|+.  ++++||+++.+++++++++++|
T Consensus       307 ~~-------~~~~~~~~-l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l  356 (357)
T TIGR03539       307 GE-------DAWDTVDR-LAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL  356 (357)
T ss_pred             CC-------CHHHHHHH-HHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence            52       34556555 4678999999998764  5799999988889999999876

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2.2e-46  Score=349.63  Aligned_cols=328  Identities=20%  Similarity=0.295  Sum_probs=273.5

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ++++++|+.|.+.    +++++.+++++.+.+..  ...|++ .|.++||++||+++      ++++++|++|+|+++++
T Consensus        28 ~~~~i~l~~nen~----~~~~~~v~~a~~~~~~~--~~~Yp~-~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~i   94 (366)
T PRK01533         28 DHSFVKLASNENP----FGCSPRVLDELQKSWLD--HALYPD-GGATTLRQTIANKL------HVKMEQVLCGSGLDEVI   94 (366)
T ss_pred             CCceEEeCCCCCC----CCCCHHHHHHHHHHHHh--cCcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            5688999999864    78889999999887654  335765 68899999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.+++++||+|++++|+|+.|...++..|+++..++.+   ++.+|++.++++++++++++++++||||||.+++.+
T Consensus        95 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~  171 (366)
T PRK01533         95 QIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR  171 (366)
T ss_pred             HHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHH
Confidence            99999999999999999999999999999999999999873   346899999999888899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|+++|++++ ++|+||+|.++.+.+.....+..+...+++|+++||||.|+++|+|+||+++++        ++++
T Consensus       172 ~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--------~~~~  242 (366)
T PRK01533        172 KLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--------ELIE  242 (366)
T ss_pred             HHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--------HHHH
Confidence            9999999998876 577899999877653222233334455789999999999999999999999864        6888


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+..... .++.+.++|.++..+|++  ..+.++.++..+++++.+.+.++.+ ++. + .+..|+|+|++++       
T Consensus       243 ~l~~~~~-~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~-~~~~~nf~~~~~~-------  309 (366)
T PRK01533        243 KLNVVRL-PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKEN-EIP-F-YQSQTNFIFLPVE-------  309 (366)
T ss_pred             HHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCcCcEEEEeCC-------
Confidence            8877653 467899999999999975  5778888888889999999999887 777 4 4557889999875       


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                       +..++...+ .++||.|++   |  ++++||+++.. ++.+.+++.|+++++.
T Consensus       310 -~~~~~~~~l-~~~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~  355 (366)
T PRK01533        310 -NGGEIYEAC-AHAGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFEN  355 (366)
T ss_pred             -CHHHHHHHH-HHCCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHh
Confidence             345666665 568999997   3  58899998654 6678888888877654

>PLN02368 alanine transaminase

Probab=100.00  E-value=9.9e-47  Score=354.02  Aligned_cols=309  Identities=25%  Similarity=0.430  Sum_probs=253.3

Q ss_pred             cCcceeEecccCCCCC----CCC----------------------CCcHHHHHHHHHHHh-cCCCCCCCCCCCcHHHHHH
Q 014936           33 NEKKVISLAMGDPTVH----SCF----------------------HTTHVATEAVAEALL-SEKFNGYAPTAGLPLTRRA   85 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~----~~~----------------------~~~~~~~~a~~~~~~-~~~~~~y~~~~g~~~lr~~   85 (415)
                      .+.++|+|+.|+|+..    .++                      .+++.+.+++..... .+....|+++.|.++||++
T Consensus        36 ~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~a  115 (407)
T PLN02368         36 EGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKE  115 (407)
T ss_pred             HhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHH
Confidence            4789999999998621    012                      255666666554322 2345689999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChh
Q 014936           86 IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLD  164 (415)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  164 (415)
                      ||+|+++.+|..+++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...++..|.+++.++.+.+++|.+|++
T Consensus       116 ia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~  195 (407)
T PLN02368        116 VAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVN  195 (407)
T ss_pred             HHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHH
Confidence            999999888888999999999999999999999987 7999999999999999999999999999999877777899999


Q ss_pred             HHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccccccc----C-
Q 014936          165 DIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVF----G-  232 (415)
Q Consensus       165 ~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~----~-  232 (415)
                      .+++.+++      +++++++++||||||.+++.+++++|+++|++||++||+||+|.++.|++. .+.++..+    + 
T Consensus       196 ~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~  275 (407)
T PLN02368        196 NLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGP  275 (407)
T ss_pred             HHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcc
Confidence            99998864      678999999999999999999999999999999999999999999998764 33343222    1 


Q ss_pred             ---CCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc------H
Q 014936          233 ---STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD------E  302 (415)
Q Consensus       233 ---~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~  302 (415)
                         ..+++|+++||||.| +++|+|+||+++.+.     .+++++.+.......++++.++|.++..+|....      +
T Consensus       276 ~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~-----~~~li~~~~~~~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~  350 (407)
T PLN02368        276 PISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI-----PPKTVEEIYKVASIALSPNVSGQIFMGLMVNPPKPGDISYD  350 (407)
T ss_pred             cccccceEEEEecCCcccccCCccceEEEEEeCC-----CHHHHHHHHHHhcccCCCCcHHHHHHHHHhCCCCCCCccHH
Confidence               234899999999998 799999999995210     1257787777643456788899999999997531      1


Q ss_pred             HHH---HHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936          303 VFF---KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL  347 (415)
Q Consensus       303 ~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~  347 (415)
                      .+.   +++.+.++++++.+.+.|+++|++. +..|+||+|+|++++.
T Consensus       351 ~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~-~~~P~Gafy~~~~i~l  397 (407)
T PLN02368        351 QFVRESKGILESLRRRARMMTDGFNSCKNVV-CNFTEGAMYSFPQIKL  397 (407)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-eCCCCeeeEeccCCCC
Confidence            233   4567899999999999999998988 4589999999987753

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1e-45  Score=347.35  Aligned_cols=335  Identities=20%  Similarity=0.295  Sum_probs=271.2

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhhC--CCCCCCCcEEEeCChHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDL--PYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~--~~~~~~~~i~i~~g~~~a  112 (415)
                      .+++|+.|+|.    +++++.+++++.+.+.... ...|++ .|.++||++||+|+++.+  ++.+++++|++|+|++++
T Consensus        29 ~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a  103 (374)
T PRK02610         29 QLDRLDTNEFP----YDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL  103 (374)
T ss_pred             ceeEecCCCCC----CCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence            47999999864    7788999999998776532 357876 699999999999998766  466899999999999999


Q ss_pred             HHHHHHHhcCCCC-EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecCCCCccc
Q 014936          113 IDVAMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCG  187 (415)
Q Consensus       113 l~~~~~~l~~~gd-~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG  187 (415)
                      +..++.+++.+|| +|++++|+|..+...++..|++++.++.+. +++++|+++++++++    ++++++++++||||||
T Consensus       104 l~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG  182 (374)
T PRK02610        104 IRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG  182 (374)
T ss_pred             HHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence            9988888777886 899999999999999999999999998753 457899999998876    4789999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC
Q 014936          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR  267 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  267 (415)
                      .+++.+++++|+++|+  |+++|+||+|..+.+.    ..+..+...+++|+++||||.|+++|+|+||+++++      
T Consensus       183 ~~~s~~~l~~l~~~~~--~~~iI~De~Y~~~~~~----~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~------  250 (374)
T PRK02610        183 NPLTAAELEWLRSLPE--DILVVIDEAYFEFSQT----TLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP------  250 (374)
T ss_pred             CCCCHHHHHHHHhccC--CcEEEEeccccccCcc----chHHHHhcCCCEEEEEecchhccCcccceeeeecCH------
Confidence            9999999999999874  8999999999987532    122233344578999999999999999999999864      


Q ss_pred             hHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936          268 KPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL  347 (415)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~  347 (415)
                        ++++.+..... .++.+.+.|.++..++++. +.+.+..++.+ +.++.+.+.|++++++. + .|.+|+|+|++++.
T Consensus       251 --~l~~~l~~~~~-~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~-~~r~~l~~~L~~~~~~~-~-~p~~g~f~~~~l~~  323 (374)
T PRK02610        251 --ELIAVLEKVRL-PYNLPSFSQLAAQLALEHR-QELLAAIPEIL-QERDRLYQALQELPQLR-V-WPSAANFLYLRLSQ  323 (374)
T ss_pred             --HHHHHHHHhcC-CCCCCHHHHHHHHHHhcCH-HHHHHHHHHHH-HHHHHHHHHHHhCCCcE-e-CCCcceEEEEeCCC
Confidence              67888776653 3567888999999888753 45555555444 45777888998887776 4 68899999999874


Q ss_pred             cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      .     .+..++...+ .++||.+.++     ++++||+++.+ +++++++++|++++.+
T Consensus       324 ~-----~~~~~~~~~l-~~~gi~v~~~-----~~~lRls~~~~-~~~~~~l~~l~~~l~~  371 (374)
T PRK02610        324 D-----AALAALHQAL-KAQGTLVRHT-----GGGLRITIGTP-EENQRTLERLQAALTQ  371 (374)
T ss_pred             C-----CCHHHHHHHH-HHCCEEEEeC-----CCeEEEeCCCH-HHHHHHHHHHHHHHhh
Confidence            2     2456666664 6789999764     47899999864 5689999999988764

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.8e-45  Score=342.97  Aligned_cols=333  Identities=20%  Similarity=0.329  Sum_probs=272.4

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      .++++|+.|.+.    .++++.+++++.+.+.  ....|+++ +.++||+++|+|+      ++++++|++|+|+++++.
T Consensus        19 ~~~~~l~~~~~~----~~~p~~~~~a~~~~~~--~~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~   85 (354)
T PRK06358         19 NMILDFSANINP----LGVPESLKQAITENLD--KLVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELIF   85 (354)
T ss_pred             cceEEecCCCCC----CCCCHHHHHHHHHHHH--hhhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHHH
Confidence            457999999754    4557889999988764  35578874 6899999999998      579999999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      .++.++ .+ ++|+++.|+|+.+...++..|+++..++.+.++++.+| +++.+.+..+++++++++||||||.+++.++
T Consensus        86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~  162 (354)
T PRK06358         86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEE  162 (354)
T ss_pred             HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHH
Confidence            999987 44 68999999999999999999999999998766677888 6666666667899999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +++|+++|+++|+++|+||+|.++.+++.....+..++..+++|+++||||.|+++|+|+||+++++       +.+++.
T Consensus       163 ~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~-------~~~~~~  235 (354)
T PRK06358        163 MKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN-------KNLAEK  235 (354)
T ss_pred             HHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC-------HHHHHH
Confidence            9999999999999999999999998876433334445556789999999999999999999999854       246677


Q ss_pred             HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936          275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII  354 (415)
Q Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~  354 (415)
                      +..... .++.+.++|.++..+|++  ..++++.++.++++++.+.+.|++++++. +..| .|.|+|++++.       
T Consensus       236 ~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~-~g~f~~~~~~~-------  303 (354)
T PRK06358        236 LLQMRE-PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKP-SVNFIFFKLEK-------  303 (354)
T ss_pred             HHHhCC-CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCC-cceEEEEEcCc-------
Confidence            766544 467788899999999964  46778889999999999999999887776 4345 56699998863       


Q ss_pred             CHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          355 DDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       355 ~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                       ..++...++ ++||.+.||+.|+.  ++++||+++.+ ++.+.+++.|.+++
T Consensus       304 -~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~~  353 (354)
T PRK06358        304 -PIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVIL  353 (354)
T ss_pred             -hHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence             467777765 57999999999853  57899998653 45566676666543

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.6e-46  Score=347.75  Aligned_cols=331  Identities=21%  Similarity=0.308  Sum_probs=277.2

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ...+++|+.|.+.    +++++.+.+++.+.+..  . .|.+..|.+++|+++|+++      ++++++|++|+|+++++
T Consensus        28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l   94 (359)
T PRK03158         28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI   94 (359)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence            3478999999864    56688899999887753  3 3444578999999999998      56789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.+++++||+|++++|+|+.+...+...|.++..++.+   ++.+|++.+++.++++++++++++|+||||.+++.+
T Consensus        95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~  171 (359)
T PRK03158         95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE  171 (359)
T ss_pred             HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999999874   356899999998888899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++.++++.|+ +|+++|+||+|.++.+.+.....+...+..+++++++||||.|+++|+|+||+++++        ++++
T Consensus       172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~  242 (359)
T PRK03158        172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--------ELIE  242 (359)
T ss_pred             HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--------HHHH
Confidence            9999999875 699999999999988765333333334445689999999999999999999999865        6788


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+..... .+..+.++|.++..+|++  .+++++.++.++++++.+.+.|+++ ++. + .|.+|+|+|++++.      
T Consensus       243 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~~g~~i~~~~~~------  310 (359)
T PRK03158        243 KLNIARP-PFNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPSQTNFIFVDTGR------  310 (359)
T ss_pred             HHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCCcCcEEEEECCC------
Confidence            8876654 357899999999999975  4678888888899999999999888 676 4 56678999998742      


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                       ++.++...++ ++||.+.||..|+.++++||+++ +.++++.++++|+++
T Consensus       311 -~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~  358 (359)
T PRK03158        311 -DANELFEALL-KKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL  358 (359)
T ss_pred             -CHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence             4667777775 57999999999987899999997 567778888888764

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=1.8e-45  Score=349.76  Aligned_cols=386  Identities=18%  Similarity=0.306  Sum_probs=282.5

Q ss_pred             CccCCcchhhHHHHHHHhhhcccccccC----cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936            7 GIDNTGSIITIKGMLSLLMQSVDDEKNE----KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l   82 (415)
                      +.+..|...+|..-+..+....+. ..|    +++++++.|.|+    +++++ +++++.+.+.. .  .|+++.|..++
T Consensus        63 ~~~g~~~~~g~~~r~~~~~~~~~~-~~g~~~l~~~i~l~~g~p~----~~~~~-~~~~~~~~~~~-~--~Y~~p~g~~~~  133 (521)
T TIGR03801        63 GLGGMPQKEGIEERFETFLAENKS-QPGAEFLRDIISYVIDQLG----FDPDA-FLYEMCDGIIG-D--NYPVPDRMLPH  133 (521)
T ss_pred             CcCCCcCcchHHHHHHHHHHhCCC-CchHHHHHHHHhhcCCCCC----CCCCH-HHHHHHHHhhc-C--CCCCCCCCHHH
Confidence            344455555666665544433310 001    257999999976    55555 44555555432 2  58877888888


Q ss_pred             HHHHHH-HHhhhCCCC-CCCC--cEEEeCChHHHHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHhC--CCeEEEe
Q 014936           83 RRAIAE-YLSRDLPYK-LTPN--DVFVTSGCTQAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFR--HIEVRHF  151 (415)
Q Consensus        83 r~~ia~-~~~~~~~~~-~~~~--~i~i~~g~~~al~~~~~~-----l~~~gd~vi~~~p~y~~~~~~~~~~--g~~~~~~  151 (415)
                      ++++++ |+.+.++.. ..++  +|++|+|+++++..++.+     +++|||+|+++.|+|+.|...++..  |.+++.+
T Consensus       134 ~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i  213 (521)
T TIGR03801       134 SEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRI  213 (521)
T ss_pred             HHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEe
Confidence            888885 666554433 3334  899999999999999887     6899999999999999999987765  6777777


Q ss_pred             eccCCCC-----CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc--CcEEEEccccCCcccCCCC
Q 014936          152 DLLPDKG-----WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKP  224 (415)
Q Consensus       152 ~~~~~~~-----~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~  224 (415)
                      +.+++++     |.+|.++++++++++++++++++||||||.+++.+++++|+++|++|  +++||+||+|+.+.+.   
T Consensus       214 ~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---  290 (521)
T TIGR03801       214 KADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---  290 (521)
T ss_pred             ecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---
Confidence            7654433     88999999999888999999999999999999999999999999986  9999999999987742   


Q ss_pred             cccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC------hHHHHHHH-----------------------
Q 014936          225 FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR------KPKVVERM-----------------------  275 (415)
Q Consensus       225 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~------~~~~~~~~-----------------------  275 (415)
                      +.++... ..+++|++.||||.|+++|||+||+++++.. +++      .++..+.+                       
T Consensus       291 ~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~-v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vad  368 (521)
T TIGR03801       291 FRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDN-IFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVAD  368 (521)
T ss_pred             ccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchH-HHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHH
Confidence            2233232 2358999999999999999999999987521 000      00011111                       


Q ss_pred             -Hhh-ccccCCchhHHHH-----HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc
Q 014936          276 -KKY-FDILGDPATFIQA-----AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS  348 (415)
Q Consensus       276 -~~~-~~~~~~~~~~~~~-----a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~  348 (415)
                       +.. .+++.+.+.+.|.     ++.++++ ..+.+.++.++.++++++.+.+.| .+ .+. ...|.+++|+|++++..
T Consensus       369 sr~v~~~~~~g~s~p~Q~q~al~a~~all~-~~~~y~~~~~~~~~~R~~~l~~~L-g~-~~~-~~~~~g~~Y~~~di~~~  444 (521)
T TIGR03801       369 SRQVALNHTAGLSTPQQVQMALFSLFALMD-KENAYKAETKDICRRREKLLFRGL-GL-PLQ-EDPNDVAYYTLIDLEEW  444 (521)
T ss_pred             HHHHHHhccCCCCcHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHHhc-CC-CCc-CCCCCeEEEEEeehHHH
Confidence             222 2234556666665     3444554 345788999999999999999888 22 222 23688899999998742


Q ss_pred             ccC-----------CCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEee-CChhhHHHHHHHHHHHHHHHHH
Q 014936          349 LLD-----------DIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFA-VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       349 ~~~-----------~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      ...           ...++.+++.+|++++||.+.||..|+. .+++|||++ .+++++.++.++|.+++.++..
T Consensus       445 ~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~  519 (521)
T TIGR03801       445 AEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE  519 (521)
T ss_pred             HHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence            100           0125789999999999999999999986 467999997 6899999999999999977654

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-45  Score=322.04  Aligned_cols=373  Identities=24%  Similarity=0.398  Sum_probs=301.5

Q ss_pred             ccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHh---c-----CCCCCCCCCCCcHHHHHHHHHHHhhhCCCC--
Q 014936           28 VDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL---S-----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYK--   97 (415)
Q Consensus        28 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~---~-----~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~--   97 (415)
                      ++++.|+.++|+++...+..  ++.....+.+.-.++..   .     ..+..|.+..|.+++|+++|+|+.+.+|-.  
T Consensus        66 y~~~~Np~GiIQmGlaENql--c~DL~~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~  143 (471)
T KOG0256|consen   66 YDPIKNPLGIIQMGLAENQL--CFDLIESWLSKNPEASNCTREGQSSFDELAMFQDYHGLPSFRQAVAEFMERARGNRVK  143 (471)
T ss_pred             CCCCCCchHHHHhhhhhhHH--HHHHHHHHHHhChhhhhcccccccchhhHhhcccccCchHHHHHHHHHHHHHhCCCCc
Confidence            36667788899998887542  11111111111111111   1     134678899999999999999999877644  


Q ss_pred             CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCCCChhHHHhhcCC----
Q 014936           98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLADQ----  172 (415)
Q Consensus        98 ~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----  172 (415)
                      .+|+++++++|+|.+++++..+|.+|||.-+++.|.|+++..-++ ..|++++++.....+++.++++++|.++.+    
T Consensus       144 fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~  223 (471)
T KOG0256|consen  144 FDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKL  223 (471)
T ss_pred             cCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999999876554 568999999988888999999999987753    


Q ss_pred             --CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-----CCCCeEEEccCcc
Q 014936          173 --NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-----STVPILTLGSLSK  245 (415)
Q Consensus       173 --~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK  245 (415)
                        +.+.++++||+||.|.+++.+++..+++++.++|+++|+||+|+..+|+...+.++.++.     ..+++.+++|+||
T Consensus       224 ~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSK  303 (471)
T KOG0256|consen  224 GLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSK  303 (471)
T ss_pred             CCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecc
Confidence              568899999999999999999999999999999999999999999999988877765542     3457899999999


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHHHHHh
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVDICYNKI  323 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l  323 (415)
                      -||+||+|+|.+...++       ++.....+... .+..++..|..++.+|.+..  ++++++..++++.+.+++.+.|
T Consensus       304 D~GlpGfRvGviYS~ne-------~VvsaA~kmss-f~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gL  375 (471)
T KOG0256|consen  304 DFGLPGFRVGVIYSNNE-------DVVSAATKMSS-FGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGL  375 (471)
T ss_pred             ccCCCceEEEEEEecCh-------HHHHHHHHHhh-ccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            99999999999999773       36666666544 46789999999999998743  5888999999999999999999


Q ss_pred             hcCCCCcCCCCCCCceEEEEecCccccC-CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCC-hhhHHHHHH
Q 014936          324 KEIPCISCPHKPEGSMAVMLKLNLSLLD-DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVD-PYSLEECLD  399 (415)
Q Consensus       324 ~~~~~~~~~~~p~~g~~~~~~l~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~-~~~l~~~l~  399 (415)
                      +++ |+.+. ..++|+|+|+++..--.+ ......++++.++.+-++-++||+.|..  +||+|++|+.. ++.++-+++
T Consensus       376 k~l-gI~cl-~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~  453 (471)
T KOG0256|consen  376 KAL-GIPCL-KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMR  453 (471)
T ss_pred             Hhc-CCcee-ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHH
Confidence            999 88854 889999999998542221 2234568888888888999999999765  89999999764 555555999


Q ss_pred             HHHHHHHHHHHHh
Q 014936          400 RIKSFYQRHAKQL  412 (415)
Q Consensus       400 ~l~~~~~~~~~~~  412 (415)
                      ||+.++.++...+
T Consensus       454 Ri~~~~~~~~~~l  466 (471)
T KOG0256|consen  454 RLKQFLDSQVQPL  466 (471)
T ss_pred             HHHHHHHhhhccc
Confidence            9999998765544

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-44  Score=339.69  Aligned_cols=331  Identities=20%  Similarity=0.313  Sum_probs=269.5

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +..+++|+.|.|.    +.+++.+.+++.+...  ....|+++.| .+||+++|+++      ++++++|++|+|+++++
T Consensus        35 ~~~~i~l~~~~~~----~~~~~~~~~al~~~~~--~~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~l  101 (371)
T PRK05166         35 VPRIAKLGSNENP----LGPSPAVRRAFADIAE--LLRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDLI  101 (371)
T ss_pred             CcceEEcCCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            5578999999864    5667889999887543  3457998888 59999999998      56889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.+++++||.|+++.|+|+.+...++..|+++..++.++  ++++|++++++.++++++++++++||||||.+++.+
T Consensus       102 ~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~  179 (371)
T PRK05166        102 AVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD  179 (371)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence            999999999999999999999999999999999999998753  357899999999988889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++++|+++|++ ++++|+||+|.++.+++.....+..+. ..+++|+++||||.|+++|+|+||+++++       +++.
T Consensus       180 ~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~-------~~l~  251 (371)
T PRK05166        180 QLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD-------PELV  251 (371)
T ss_pred             HHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC-------HHHH
Confidence            99999999975 889999999999885433222222222 23579999999999999999999988744       2577


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.+..... ....+.++|.++..++.+  ..++++.++.++++++.+.+.|++. ++. + .|.+|+|+|++++.     
T Consensus       252 ~~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~~g~fl~~~~~~-----  320 (371)
T PRK05166        252 GLLDRVRT-PFNVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEM-GYR-I-APSRANFLFFDARR-----  320 (371)
T ss_pred             HHHHHhcc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCCcCCEEEEeCCC-----
Confidence            77765543 356788889888888864  4788888899999999999999988 676 4 57778999998753     


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCCh--hhHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDP--YSLEECLDRI  401 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~--~~l~~~l~~l  401 (415)
                        ++.++...++ ++||.+.||..++.++++||+++.++  +.+.++++.+
T Consensus       321 --~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~~~~~~~l~~~l~~i  368 (371)
T PRK05166        321 --PASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGSPEENDHFVAALDKV  368 (371)
T ss_pred             --CHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCCHHHHHHHHHHHHHH
Confidence              4667777775 46999999987777899999998532  4444444443

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.3e-44  Score=336.18  Aligned_cols=333  Identities=21%  Similarity=0.328  Sum_probs=268.2

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.++++|+.|.+.    +++++.+++++.+.+..  ...|++. +..++|+++|+++      ++++++|++|+|+++++
T Consensus        19 ~~~~i~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l   85 (356)
T PRK08056         19 PDQLLDFSANINP----LGMPVSLKRAIIDNLDC--AERYPDV-EYRHLHQALARHH------QVPASWILAGNGETESI   85 (356)
T ss_pred             hhhEEEeccccCC----CCCCHHHHHHHHHHHHh--cccCcCc-cHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            5678999999854    77889999999887763  3478764 6899999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.++ .+|+ +++..|+|..+...++..|+++..++.++++++.+| +++++.+.++++++++++||||||.+++.+
T Consensus        86 ~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~  162 (356)
T PRK08056         86 FAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQ  162 (356)
T ss_pred             HHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHH
Confidence            9999887 5775 777899999999999999999999998766666666 455556667889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|+++|+++++++|+||+|.++.+.+....+.  +...+++++++||||.|+++|+|+||+++++       +++++
T Consensus       163 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~-------~~~~~  233 (356)
T PRK08056        163 LLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSD-------DAAVA  233 (356)
T ss_pred             HHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence            99999999999999999999999987654322222  2234578999999999999999999999853       24666


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+..... .++.+.++|.++..+++.  ..+.++.++.++++++.+.+.|++++++. + .|.+|+|+|++++.      
T Consensus       234 ~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~------  302 (356)
T PRK08056        234 RMRRQQM-PWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLT-V-WPGRANYLFLRCER------  302 (356)
T ss_pred             HHHHhCC-CCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-cCCCCcEEEEEcCC------
Confidence            6665433 456777888888888864  46777888999999999999999887776 4 45678999998863      


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                       ++.++...++ ++||.+.+|..|..  .++|||+++. .++.+.+++.|++++
T Consensus       303 -~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~  353 (356)
T PRK08056        303 -PDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVL  353 (356)
T ss_pred             -ChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHH
Confidence             3556777765 57999999998843  4699999974 455566666666554

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=2.8e-44  Score=336.36  Aligned_cols=329  Identities=19%  Similarity=0.274  Sum_probs=263.9

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ..++++|+.|.+.    +++++.+.+++.+.+..  ...|+++ +..+||++||+|+      ++++++|++|+|+++++
T Consensus        21 ~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~i   87 (360)
T PRK07392         21 PDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAELL   87 (360)
T ss_pred             cccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            4468999999754    67789999999887763  5579875 4689999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC---CCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW---EVDLDDIESLADQNTVALVIINPGNPCGNVY  190 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  190 (415)
                      ..++.++. +||.|++++|+|..+...++..|++++.++.++++++   ..+++.+++.. .+++++++++||||||.++
T Consensus        88 ~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~  165 (360)
T PRK07392         88 TWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLW  165 (360)
T ss_pred             HHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCc
Confidence            99999875 6899999999999999999999999999998655443   34677776554 3678899999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      +.+++.+++   +++++ +|+||+|.++.+++.....+..++..+++|+++||||.|+++|+|+||+++++        +
T Consensus       166 ~~~~l~~l~---~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~--------~  233 (360)
T PRK07392        166 SREAILPLL---EQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP--------D  233 (360)
T ss_pred             CHHHHHHHH---HHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH--------H
Confidence            977666554   56775 66799999988765322223334455689999999999999999999999865        5


Q ss_pred             HHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      +++.+..... .++++.++|.++..+|++  ..+.++.++.++++++.+.+.|++++++. + .|.+++|+|++++.   
T Consensus       234 ~~~~~~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~fl~~~~~~---  305 (360)
T PRK07392        234 RLQRWQQWRD-PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPSAANFLLVQSQG---  305 (360)
T ss_pred             HHHHHHhhCC-CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCCEEEEEcCC---
Confidence            7777765543 467889999999999975  36677777889999999999999888877 4 56889999988753   


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCCh--hhHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDP--YSLEECLDRI  401 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~--~~l~~~l~~l  401 (415)
                          ++.++...+++++||.+.||..|+.  ++++||+++.++  +++.++++++
T Consensus       306 ----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~  356 (360)
T PRK07392        306 ----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI  356 (360)
T ss_pred             ----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence                4677888877888999999999864  579999997643  5666666654

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.5e-44  Score=337.02  Aligned_cols=327  Identities=21%  Similarity=0.292  Sum_probs=267.3

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.++++|+.|.+.    +++++.+++++.+..   ....|+++ +..+||++|++++      ++++++|++|+|+++++
T Consensus        51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i  116 (380)
T PLN03026         51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPDP-ESRRLRAALAEDS------GLESENILVGCGADELI  116 (380)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCCC-CHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence            4688999999854    667788888886531   23468764 6899999999998      57889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCCceEEEecCCCCccccCCCH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      ..++.+++++||+|++++|+|+.|...++..|+++..++.+  .++.+|++++++.+ .++++++++++||||||.+++.
T Consensus       117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~  194 (380)
T PLN03026        117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD  194 (380)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999998899999999999874  35779999999988 6789999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++++|++.+    +++|+||+|.++.+.+.   ....+...+++++++||||.|+++|+|+||+++++        +++
T Consensus       195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~---~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--------~~i  259 (380)
T PLN03026        195 DDLLKILELP----ILVVLDEAYIEFSTQES---RMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--------SII  259 (380)
T ss_pred             HHHHHHHhcC----CEEEEECcchhhcCCcc---hHHHHHhCCCEEEEecchHhhcCccccceeeecCH--------HHH
Confidence            9999998753    89999999998875432   12223345689999999999999999999999864        678


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.+..... .+..+.++|.++.++|++  .+++++.++.++++++.+.+.|++++++. + .|.+++|+|++++..    
T Consensus       260 ~~l~~~~~-~~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~~~~f~~~~~~~~----  330 (380)
T PLN03026        260 EYLWRAKQ-PYNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPSDANFILCRVTSG----  330 (380)
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCCCCeEEEEECCCC----
Confidence            88776654 356788899999999975  47788899999999999999999885554 4 688899999988631    


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                       .+..++...++ ++||.+.++..++.++++||+++. .++.+.+++.|++
T Consensus       331 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~-~~~~~~l~~al~~  378 (380)
T PLN03026        331 -RDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGK-PEHTDALMEALKQ  378 (380)
T ss_pred             -CCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCC-HHHHHHHHHHHHH
Confidence             24667777765 679999998766667899999984 4455666666543

>PLN02397 aspartate transaminase

Probab=100.00  E-value=6.9e-44  Score=338.88  Aligned_cols=345  Identities=17%  Similarity=0.193  Sum_probs=258.4

Q ss_pred             CcceeEecccC-CCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE-----EEeC
Q 014936           34 EKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV-----FVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i-----~i~~  107 (415)
                      +...++++.|. |+........+.+.++....+..+....|+++.|.++||+++++|+.+..+...++++|     +.++
T Consensus        47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~  126 (423)
T PLN02397         47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT  126 (423)
T ss_pred             CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence            45678999996 55332112245666766555444444579999999999999999996533322233343     2333


Q ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCC
Q 014936          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGN  184 (415)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~n  184 (415)
                      |+. ++...+..++.|||+|++++|+|+.|...++..|++++.++..+++++++|++.+++.+.   ++++++++++|||
T Consensus       127 Ga~-~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N  205 (423)
T PLN02397        127 GSL-RLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN  205 (423)
T ss_pred             HHH-HHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence            333 344444455579999999999999999999999999999987444457899998877664   4578888899999


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC--CcccccccC-CCCCeEEEccCccccCCCCceEEEEE--e
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFV--T  259 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~--~  259 (415)
                      |||.+++.+++++|+++|++||+++|+||+|.++.+++.  ...++..+. ..+++|+++||||.|+++|+|+||++  +
T Consensus       206 PTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~  285 (423)
T PLN02397        206 PTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVC  285 (423)
T ss_pred             CCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEe
Confidence            999999999999999999999999999999999998641  223333332 22469999999999999999999986  3


Q ss_pred             eCCCCCCChHHHHH----HHHhhc-cccCCchhHHHHHHHHhhCCCc--HH---HHHHHHHHHHHHHHHHHHHhhcCCC-
Q 014936          260 TDPCGMFRKPKVVE----RMKKYF-DILGDPATFIQAAVPSILQQPD--EV---FFKKTLNLLKQSVDICYNKIKEIPC-  328 (415)
Q Consensus       260 ~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~---~~~~~~~~~~~~~~~l~~~l~~~~~-  328 (415)
                      ++       +++++    .+.... ....+++.+.|.++..+|+...  +.   ++++.++.++++++.+.+.|+++ + 
T Consensus       286 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~  357 (423)
T PLN02397        286 KS-------ADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR-GS  357 (423)
T ss_pred             CC-------HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence            22       13333    333332 2234567789999998887631  12   36778889999999999999988 4 


Q ss_pred             ---CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHH
Q 014936          329 ---ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSF  404 (415)
Q Consensus       329 ---~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~  404 (415)
                         +. +..|++|+|+|++++          .+++..|++++||.+.++      +  |++++ .+++++++++++|+++
T Consensus       358 ~~~~~-~~~p~gg~fl~~~l~----------~~~~~~Ll~~~~V~v~~~------~--Ri~~~~~~~~~i~~~~~~i~~~  418 (423)
T PLN02397        358 PGDWS-HITKQIGMFSFTGLN----------KEQVDRMTKEYHIYMTRD------G--RISMAGLSSKNVPYLADAIHAV  418 (423)
T ss_pred             CCCCC-cccCCceEEEecCCC----------HHHHHHHHHhCCEEECCC------C--eEEEeeCCHHHHHHHHHHHHHH
Confidence               66 447999999998773          348899999999999742      2  99995 8999999999999998


Q ss_pred             HH
Q 014936          405 YQ  406 (415)
Q Consensus       405 ~~  406 (415)
                      +.
T Consensus       419 ~~  420 (423)
T PLN02397        419 VT  420 (423)
T ss_pred             Hh
Confidence            74

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-43  Score=325.09  Aligned_cols=333  Identities=21%  Similarity=0.355  Sum_probs=282.2

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      .+++++|+++.+.    +++++.+++++.+.+.  .+..||++ ...+++++++++++     .+++++|++++|+++.+
T Consensus        21 ~~~~i~LssNenP----~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~-----~~~~~~V~~gnGsde~i   88 (356)
T COG0079          21 LPGIIKLSSNENP----YGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYG-----VVDPENVLVGNGSDELI   88 (356)
T ss_pred             CccceeecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhC-----CCCcceEEEcCChHHHH
Confidence            3368999999853    7778999999988876  56799997 67999999999993     16889999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++++++.+||+|++..|+|..|...++..|++++.++..+   |..|++.+...++++++++++||||||||..++.+
T Consensus        89 ~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~  165 (356)
T COG0079          89 ELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPRE  165 (356)
T ss_pred             HHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence            999999999999999999999999999999999999998754   77999999999988899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      +++++++.+.+ +.++|+||+|.+|.-    ...........+++++.||||+|+++|+|+||++++.        ++++
T Consensus       166 ~l~~l~~~~~~-~~~vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--------~~i~  232 (356)
T COG0079         166 ELRALLEALPE-GGLVVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--------ELIA  232 (356)
T ss_pred             HHHHHHHhCCC-CcEEEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCH--------HHHH
Confidence            99999999988 999999999999773    2222222345579999999999999999999988754        7999


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .++.... .+..+.+++.++.++|++.  +++++..+.+++.++++.+.|+.++ +..+ .|..++|++++++.     .
T Consensus       233 ~l~~vr~-p~~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS~aNFvlv~~~~-----~  302 (356)
T COG0079         233 ALNKVRP-PFNVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALG-LFGV-FPSQANFVLVRVPD-----A  302 (356)
T ss_pred             HHHHhcC-CCCCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCCCCcEEEEECCC-----c
Confidence            9988876 4778899999999999873  8899999999999999999999995 4423 78889999999863     1


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCC-CCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTA-VGLKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                       ....+.+.| .++||.++.... ...++|+||++++.+|. +.+++.|+++++.
T Consensus       303 -~~~~l~~~L-~~~giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~  354 (356)
T COG0079         303 -EAAALAEAL-LKKGILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG  354 (356)
T ss_pred             -cHHHHHHHH-HHCCEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence             233455555 566999998765 23467999999887776 8888888887653

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=9.8e-44  Score=334.23  Aligned_cols=335  Identities=19%  Similarity=0.285  Sum_probs=278.6

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.++++|+.|.+.    +++++.+++++.+.+..  ...|++.. ..++|+++|+++      ++++++|++|+|+++++
T Consensus        31 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l   97 (367)
T PRK02731         31 IADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEIL   97 (367)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            5678999999864    45678899999888753  46788754 479999999998      56789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.+++++||+|+++.|+|..+...+...|+++..++.   +++.+|++.+++.++++++++++++|+||||.+++.+
T Consensus        98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~  174 (367)
T PRK02731         98 ELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAE  174 (367)
T ss_pred             HHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHH
Confidence            9999999999999999999999888888899999998876   4567899999999988899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++.++++.|+ +|+++|+||+|..+.+.+.....+..++..+++++++||||.|+++|+|+||+++++        ++++
T Consensus       175 ~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--------~~~~  245 (367)
T PRK02731        175 EVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--------EIID  245 (367)
T ss_pred             HHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--------HHHH
Confidence            9999999886 599999999999888755433333334445679999999999999999999999865        6777


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+..... .+..++++|.++..+|+.  ..++++.++.++++++.+.+.|+++ ++. + .|.+|+|+|++++..     
T Consensus       246 ~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~g~~~~i~~~~~-----  314 (367)
T PRK02731        246 ALNRVRQ-PFNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPSVGNFILVDFDDG-----  314 (367)
T ss_pred             HHHHccC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCceEEEEECCCC-----
Confidence            7776543 345678899999999975  4678888999999999999999988 777 4 466789999988531     


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      .+..++...+ .++||.+.++..|+.++++|++++ +.++++.+++.|+++++
T Consensus       315 ~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        315 KDAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLA  365 (367)
T ss_pred             CCHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHh
Confidence            2566777766 467999999988876789999997 46788999999888764

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.7e-44  Score=334.97  Aligned_cols=335  Identities=18%  Similarity=0.288  Sum_probs=272.6

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ..++|+.|.|.    +++++.+++++.+.+..  .....|++ .|.++||+++|+|+++.+|.++++++|++|+|+++++
T Consensus        27 ~~i~l~~~~~~----~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l  101 (368)
T PRK03317         27 VPVRLNTNENP----YPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL  101 (368)
T ss_pred             ceeEecCCCCC----CCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence            46999999864    77889999999988753  24568876 5889999999999999889899999999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~  192 (415)
                      ..++.+++++||.|+++.|+|..+...++..|.++..++.  ++++++|+++++++++ .+++++++++|+||||.+++.
T Consensus       102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~  179 (368)
T PRK03317        102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL  179 (368)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence            9999999999999999999999999999999998887765  3457899999999886 467889999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++++|+++|   ++++|+||+|.++.+.+.. ......+..+++++++||||.|+++|+|+||+++++        +++
T Consensus       180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--------~~~  247 (368)
T PRK03317        180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--------AVV  247 (368)
T ss_pred             HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--------HHH
Confidence            9999999987   6899999999998765432 222223334579999999999999999999999865        688


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.++.... .+..++++|.++..+|+..  +.+.+.+++++++++.+.+.|++. ++. +..|.+++++|..++      
T Consensus       248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~------  316 (368)
T PRK03317        248 DALRLVRL-PYHLSAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLREL-GLR-VAPSDANFVLFGRFA------  316 (368)
T ss_pred             HHHHhcCC-CCCCCHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHC-CCE-eCCCCCcEEEEeccC------
Confidence            88876543 4678889999999999752  445556677889999999999887 776 446777777775553      


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                        +..++...+ .++||.+.+.   +.++++||+++ +.++++.+++.|+++++.
T Consensus       317 --~~~~~~~~l-~~~Gv~v~~~---~~~~~iRi~~~-~~~~~~~~~~~l~~~~~~  364 (368)
T PRK03317        317 --DRHAVWQGL-LDRGVLIRDV---GIPGWLRVTIG-TPEENDAFLAALAEVLAT  364 (368)
T ss_pred             --CHHHHHHHH-HHCCEEEEeC---CCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence              355666655 5679999874   34689999997 456788888888887653

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.7e-44  Score=333.62  Aligned_cols=327  Identities=19%  Similarity=0.306  Sum_probs=269.9

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~a  112 (415)
                      +.++++|+.|.|.    +++++.+++++.+.+.......|++ .|.++||+.+|++++      +.+ ++|++|+|++++
T Consensus        25 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~   93 (356)
T PRK04870         25 ATGMVKLDAMENP----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDEL   93 (356)
T ss_pred             CCCceeCcCCCCC----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHH
Confidence            4679999999864    7889999999999886555668987 578999999999983      343 589999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~  191 (415)
                      +..++.+++++||+|+++.|+|..+...++..|++++.++.+  .++.+|++.+++.+.+ +++++++++||||||.+++
T Consensus        94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~  171 (356)
T PRK04870         94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD  171 (356)
T ss_pred             HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999875  3467999999998864 7899999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      .+++++|+++|   +.++|+||+|..+....  ..  ..+...+++++++|||| ++++|+|+||+++++        ++
T Consensus       172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~--~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--------~~  235 (356)
T PRK04870        172 DADVERIIEAA---PGLVVVDEAYQPFAGDS--WL--PRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--------AW  235 (356)
T ss_pred             HHHHHHHHHHC---CCEEEEECCchhhcCcc--hH--HHHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--------HH
Confidence            99999999998   67899999998865421  11  12334457999999999 799999999999865        67


Q ss_pred             HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      ++.+..... .+..+.++|.++..++++  .+++++.+++++++++.+.+.|++++++. + .|.+|+|+|++++     
T Consensus       236 i~~~~~~~~-~~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~-----  305 (356)
T PRK04870        236 IAELDKVRP-PYNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPSAANFILVRVP-----  305 (356)
T ss_pred             HHHHHHccC-CCcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC-----
Confidence            777776543 356778889888888864  35688888999999999999999988876 4 5777889999875     


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                         +..++.. .++++||.+.|+..|+.  ++++||+++. .++.+.+++.|.++
T Consensus       306 ---~~~~~~~-~l~~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~  355 (356)
T PRK04870        306 ---DAAAVFD-GLKTRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA  355 (356)
T ss_pred             ---CHHHHHH-HHHHCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence               2455554 45788999999988753  6799999984 56667777777654

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.4e-43  Score=329.48  Aligned_cols=333  Identities=17%  Similarity=0.218  Sum_probs=272.3

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      .+++|+.|++.    +++++.+.+++.+...  ....|+++ +..+||++||+++      ++++++|++|+|+++++..
T Consensus        33 ~~~~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~l~~   99 (369)
T PRK08153         33 FRARIGANESG----FGPSPSVIAAMREAAA--EIWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGLLGL   99 (369)
T ss_pred             ceeEecCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHH
Confidence            45699999864    7788999999988764  23578876 5799999999998      5788999999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCCceEEEecCCCCccccCCCHHH
Q 014936          116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       116 ~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      ++.+++++||.|++++|+|+.+...+...|.+++.++.+.   ..+|++.+++.+ +++++++++++|+||||.++|.++
T Consensus       100 ~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~  176 (369)
T PRK08153        100 IVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARRENAPLVYLANPDNPMGSWHPAAD  176 (369)
T ss_pred             HHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHH
Confidence            9999999999999999999999988888999999988743   247899987765 457889999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +++++++|++ ++++|+||+|..+.+++. ..++..  ..+++++++||||.|+++|+|+||+++++        ++++.
T Consensus       177 l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--------~~~~~  244 (369)
T PRK08153        177 IVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP--------GTIKA  244 (369)
T ss_pred             HHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH--------HHHHH
Confidence            9999999874 899999999999876542 222222  23579999999999999999999999865        67777


Q ss_pred             HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936          275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII  354 (415)
Q Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~  354 (415)
                      +..... .++.++++|.++..+|++  ..++++.++.++++++.+.+.|++. ++. . .|.+++|+|++++..    ..
T Consensus       245 l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~-~p~~~~f~~~~~~~~----~~  314 (369)
T PRK08153        245 FDKVRN-HFGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARAN-GLT-P-LPSATNFVAIDCGRD----GA  314 (369)
T ss_pred             HHHhhc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCcCcEEEEECCCC----cc
Confidence            776554 357889999999999974  4778888999999999999999987 666 4 588899999987521    11


Q ss_pred             CHHHHHHHHHhhcCeEEE-cCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          355 DDIDFCFKLAKEESVIIL-PGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       355 ~~~~~~~~ll~~~gi~v~-~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      ...++..+++ ++||.+. |+.. ..++++|++++ ++++++.+++.|++++...+
T Consensus       315 ~a~~l~~~l~-~~Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~  367 (369)
T PRK08153        315 FARAVLDGLI-ARDIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAAR  367 (369)
T ss_pred             cHHHHHHHHH-HCCeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence            3456666654 5799995 6643 23579999998 57899999999998886543

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=4.3e-43  Score=331.27  Aligned_cols=356  Identities=19%  Similarity=0.265  Sum_probs=265.6

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC---CCcEEEeCChHHHH
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT---PNDVFVTSGCTQAI  113 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~---~~~i~i~~g~~~al  113 (415)
                      .+|.+.|.........+.+.+++++.+. .......|+++.|.++||+.+++++.+..+ ...   .++|++|+|+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al   82 (388)
T PRK08637          5 KYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGL   82 (388)
T ss_pred             ceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHH
Confidence            4666666543222222334444444432 223456899999999999999999876543 222   36899999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecCCCCcccc
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCGN  188 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~  188 (415)
                      .+++.+++++||.|++++|+|+.+...+. ..|.+++.++... +++++|++++++.++    +.++++++++||||||.
T Consensus        83 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~  161 (388)
T PRK08637         83 SLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGY  161 (388)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCC
Confidence            99999999999999999999999998754 6899999998732 234689999988876    45566788899999999


Q ss_pred             CCCHHHHHHHHHHHhh-----cCcEEEEccccCCcccCCCCcccc-ccc-CCCCCe--EEEccCccccCCCCceEEEEEe
Q 014936          189 VYSYQHLQKLAETANK-----LKTLVIADEVYGHLVFGDKPFVPM-GVF-GSTVPI--LTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       189 ~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~-~~~-~~~~~~--i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      +++.+++++|+++|++     ++++||+||+|.++.+++....++ ..+ +..+++  ++++|+||.|++||+|+||+++
T Consensus       162 ~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~  241 (388)
T PRK08637        162 TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITF  241 (388)
T ss_pred             CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEE
Confidence            9999999999998875     899999999999998876544332 222 233464  4567999999999999999997


Q ss_pred             eCCCCCCChHHHHHHHHhh----c-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC---CCCc
Q 014936          260 TDPCGMFRKPKVVERMKKY----F-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI---PCIS  330 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~  330 (415)
                      +.+..  .++++.+.+...    . ....+++.+.|.++..+|++.. ..++.+.+..++++++.+.+.|+..   +++.
T Consensus       242 ~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~  319 (388)
T PRK08637        242 GTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQ  319 (388)
T ss_pred             ccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc
Confidence            53100  012566666532    1 1234678899999999997632 2445566677888888888888754   2466


Q ss_pred             CCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHHHHH
Q 014936          331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       331 ~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~  408 (415)
                       +..|.+|+|+|++++.      .++.+++..+++++||.+.+.    .++++||+++ .+++++++++++|.++++++
T Consensus       320 -~~~~~~g~~~~~~l~~------~~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~  387 (388)
T PRK08637        320 -AYPFNSGYFMCLKLKG------VDAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL  387 (388)
T ss_pred             -cccccceEEEEecCCh------HHHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence             4478899999998862      146778888877889988753    2578999996 57899999999999998764

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.6e-43  Score=329.71  Aligned_cols=328  Identities=19%  Similarity=0.329  Sum_probs=267.2

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      .+++++|+.|.+.    +++++.+.+++.+.+... ...|++. +.++||++||+++      ++++++|++|+|+++++
T Consensus        23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al   90 (353)
T PRK05387         23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL   90 (353)
T ss_pred             ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence            4578999999965    666889999998877643 4578765 6699999999998      47899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .+++++++++||+|++++|+|+.+...++..|+++..++.+  .++.+|++++++    .++++++++||||||.++|.+
T Consensus        91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~  164 (353)
T PRK05387         91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA  164 (353)
T ss_pred             HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999999874  356789999874    356789999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|+++++  ++++|+||+|..+.  +....++  ....+++++++||||.|+++|+|+||+++++        ++++
T Consensus       165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~~~  230 (353)
T PRK05387        165 EIERILAANP--DSVVVIDEAYVDFG--GESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------ELIE  230 (353)
T ss_pred             HHHHHHHhCC--CcEEEEeCcccccC--CcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecCH--------HHHH
Confidence            9999999764  89999999998753  3222222  2334679999999999999999999999854        6777


Q ss_pred             HHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          274 RMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       274 ~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      .++.....  .++.+.+.|.++..++.+  .+++++.+++++++++.+.+.|+++ ++. + .|.+++|+|++++.    
T Consensus       231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~----  301 (353)
T PRK05387        231 ALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEAL-GFE-V-LPSKANFVFARHPS----  301 (353)
T ss_pred             HHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCcCcEEEEECCC----
Confidence            77766432  356788899999888864  4678888999999999999999988 776 4 57778899988763    


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                        .+..++...+ .++||.+.+......++++||+++ +.++++.+++.|++++.
T Consensus       302 --~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        302 --HDAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA  352 (353)
T ss_pred             --CCHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence              2566777776 567999976433334679999997 56889999999988754

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=5.1e-43  Score=327.69  Aligned_cols=324  Identities=16%  Similarity=0.180  Sum_probs=261.7

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      +++++|+.|.|.    +++++.+.+++.+.+..  ...|+++ +.++||+.|++++      ++++++|++|+|+++++.
T Consensus        43 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~  109 (370)
T PRK09105         43 EGAVFLNANECP----LGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPLN  109 (370)
T ss_pred             CCcEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHHH
Confidence            457999999864    77889999999887653  2468775 4899999999987      578999999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      .++.+++++||+|++++|+|+.+...++..|++++.++.++  ++.+|++.+++. .++++++++++||||||.+++.++
T Consensus       110 ~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~  186 (370)
T PRK09105        110 YAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRAD  186 (370)
T ss_pred             HHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHH
Confidence            99999999999999999999999999999999999998753  467899999876 457889999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++++.++ +++++|+||+|..+...   . +...+ +..+++++++||||.|+++|+|+||+++++        ++++
T Consensus       187 l~~l~~~~~-~~~~lIvDEaY~~f~~~---~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~~i~  253 (370)
T PRK09105        187 IEWLLANKP-AGSVLLVDEAYIHFSDA---P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--------DLLA  253 (370)
T ss_pred             HHHHHHhCC-CCcEEEEECchHHhccC---c-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--------HHHH
Confidence            999999764 58999999999875421   1 22222 335689999999999999999999999865        6777


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+... . ....+...|.++..+|.+  ..++++.+++++++++.+.+.|+++ ++. +..|+++ |++++++.      
T Consensus       254 ~l~~~-~-~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~~-f~~~~~~~------  320 (370)
T PRK09105        254 KLARF-G-HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKK-GYK-CTPSQAN-CFMVDVKR------  320 (370)
T ss_pred             HHHhc-C-CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-cCCCCCc-EEEEeCCC------
Confidence            77665 2 345777788888888865  5788899999999999999999987 777 4355555 55676642      


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCC-CCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVG-LKNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                       +..++...+++ +||.+.  ..|. .++++||+++. +++++.+++.|++++
T Consensus       321 -~~~~l~~~L~~-~gI~v~--~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~  368 (370)
T PRK09105        321 -PAKAVADAMAK-QGVFIG--RSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM  368 (370)
T ss_pred             -CHHHHHHHHHH-CCcEEe--cCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence             46778787765 599983  3343 36899999984 566787777777654

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-42  Score=323.60  Aligned_cols=325  Identities=19%  Similarity=0.329  Sum_probs=261.7

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      ..++|+.|.|+    +++++.+.+++.+.+.......|++. +..++|+++|+++      ++++++|++|+|+++++..
T Consensus        23 ~~~~l~~~~~~----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~~   91 (351)
T PRK14807         23 YKYKMDANETP----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEIIHL   91 (351)
T ss_pred             ceeEccCCCCC----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHHHH
Confidence            56899999874    77889999999887765455678864 5699999999998      5788999999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHH
Q 014936          116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       116 ~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      ++.+++++||+|++++|+|..+...++..|++++.++.+  .++.+|++.+++++++ +++++++++|+||||.+++.++
T Consensus        92 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~  169 (351)
T PRK14807         92 IMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERED  169 (351)
T ss_pred             HHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHH
Confidence            999999999999999999999999899999999999875  3467899999998875 7899999999999999999888


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +.++++   +++.++|+||+|..+.  +....+  .+...+++|+++||||.|+++|+|+||++++.        ++++.
T Consensus       170 l~~l~~---~~~~~~ivDe~y~~~~--~~~~~~--~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--------~~~~~  234 (351)
T PRK14807        170 IIKIIE---KSRGIVVVDEAYFEFY--GNTIVD--VINEFENLIVLRTLSKAFGLAGLRVGYAVANE--------NILKY  234 (351)
T ss_pred             HHHHHH---hCCCEEEEeCcchhhc--ccchHH--HhhhCCCEEEEecchHhcccchhceeeeecCH--------HHHHH
Confidence            888876   4467899999998763  322222  12334689999999999999999999999864        68888


Q ss_pred             HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936          275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII  354 (415)
Q Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~  354 (415)
                      +..... .+..+.++|.++..+|++   .+++++.+.++++++.+.+.|++++++. + .|.+|+|+|++++        
T Consensus       235 ~~~~~~-~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~~~~~~~i~~~--------  300 (351)
T PRK14807        235 LNLVKS-PYNINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIK-V-YPSKTNFILVKFK--------  300 (351)
T ss_pred             HHHccC-CCCcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcCCccEEEEEcC--------
Confidence            876543 355678899999999974   5677888888999999999998887877 5 5667889999885        


Q ss_pred             CHHHHHHHHHhhcCeEEEcCCC-CCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          355 DDIDFCFKLAKEESVIILPGTA-VGLKNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       355 ~~~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                      +..++...+ .++||.+.++.. ++.++++||+++.+ ++.+.+++.|+++
T Consensus       301 ~~~~~~~~l-~~~gV~v~~~~~~~~~~~~iRis~~~~-~~~~~l~~~l~~~  349 (351)
T PRK14807        301 DADYVYQGL-LERGILVRDFSKVEGLEGALRITVSSC-EANDYLINGLKEL  349 (351)
T ss_pred             CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHh
Confidence            345555555 567999988653 34478999999753 4456666666543

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.4e-42  Score=322.86  Aligned_cols=325  Identities=18%  Similarity=0.294  Sum_probs=256.7

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      ..++++.+.+.    +++++..       .  ..+..|+++ +..+||+++|+++      ++++++|++|+|+++++..
T Consensus        32 ~~~~~~~ne~~----~~~~~~~-------~--~~~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~   91 (364)
T PRK04781         32 GDVWLNANESA----WANPADP-------D--ASTRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDL   91 (364)
T ss_pred             CCEEeeCCCCC----CCCChhh-------c--chhccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHH
Confidence            45788887643    3444320       1  124578876 4699999999998      5789999999999999999


Q ss_pred             HHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccC-CCCCCCChhHHHhh-cCCCceEEEecCCCCccccCCCH
Q 014936          116 AMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESL-ADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       116 ~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~-~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      ++.+++++| |.|++++|+|..+...++..|.+++.++.+. ++++.+|++++++. ..++++++++++||||||.+++.
T Consensus        92 ~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~  171 (364)
T PRK04781         92 LVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIAL  171 (364)
T ss_pred             HHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCH
Confidence            999999898 7999999999989888899999999999743 34567889988654 45678999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++.+++++|++ ++++|+||+|.++.+...   .....+..+++++++||||+|+++|+|+||+++++        +++
T Consensus       172 ~~~~~l~~~~~~-~~~iI~Deay~~f~~~~~---~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--------~l~  239 (364)
T PRK04781        172 DQIERALQALQG-KALVVVDEAYGEFSDVPS---AVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--------ELI  239 (364)
T ss_pred             HHHHHHHHhCCC-CcEEEEeCcchhhcCCcc---hHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--------HHH
Confidence            999999999864 789999999999875321   12223445689999999999999999999999865        688


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.++.... .+..+.+.|.++..+|++....+..+..+.++++++.+.+.|++++++..+ .|.+|+|+|++++      
T Consensus       240 ~~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~~g~f~~~~~~------  311 (364)
T PRK04781        240 AVLRRCQA-PYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRV-YPSQGNFLLVRFD------  311 (364)
T ss_pred             HHHHhccC-CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC------
Confidence            88877654 356778888888889976544566677778899999999999988776423 6888999999885      


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCC-CCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAV-GLKNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                        +..++... +.++||.+.||..| +.++++||+++. .++.+.+++.|+++
T Consensus       312 --~~~~~~~~-l~~~gI~v~~~~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~  360 (364)
T PRK04781        312 --DAEAAFQA-LLAAGVVVRDQRAAPRLSDALRITLGT-PEQNDRVLAALQRT  360 (364)
T ss_pred             --CHHHHHHH-HHHCCeEEeeCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHH
Confidence              34555555 46789999999865 346899999975 45556666666554

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=5e-43  Score=326.11  Aligned_cols=321  Identities=21%  Similarity=0.334  Sum_probs=259.1

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      ...++|+.+.+.    +++++.+        .......|+++. ..++++.+++++      ++++++|++|+|+++++.
T Consensus        28 ~~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~~-~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~   88 (351)
T PRK01688         28 NGDVWLNANEYP----TAVEFQL--------TQQTLNRYPECQ-PKAVIENYAAYA------GVKPEQVLVSRGADEGIE   88 (351)
T ss_pred             CCceEecCCCCC----CCCChhh--------cccccccCCCCC-hHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence            346999999854    4445532        112456798754 479999999998      679999999999999999


Q ss_pred             HHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       115 ~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .++.+++++| |+|+++.|+|..|...++..|++++.++.+.  ++.+|++.+++++ +++++++++|||||||.+++.+
T Consensus        89 ~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~  165 (351)
T PRK01688         89 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQ  165 (351)
T ss_pred             HHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHH
Confidence            9999999887 8999999999999999999999999998753  4789999999887 5789999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|++.|++ +.++|+||+|.++....   .....+...+++++++||||+|+++|+|+||+++++        ++++
T Consensus       166 ~l~~l~~~~~~-~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--------~~i~  233 (351)
T PRK01688        166 DLRTLLELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--------EVIN  233 (351)
T ss_pred             HHHHHHHhCCC-CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--------HHHH
Confidence            99999999986 68899999999876321   111222345689999999999999999999999864        6888


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .++.... .+..+.+.+.++..+|++...+++++.++.++++++++.+.|++++++. ...|.+++|+|++++       
T Consensus       234 ~l~~~~~-~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~ps~~nfi~~~~~-------  304 (351)
T PRK01688        234 LLLKVIA-PYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVE-QVFDSETNYILARFT-------  304 (351)
T ss_pred             HHHhccC-CCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-eECCCCCcEEEEEcC-------
Confidence            8876643 3556777788888888754346788888999999999999999887765 236888999999875       


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCC-CCCCeEEEEeeCChhhHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAV-GLKNWLRVTFAVDPYSLEECLDRI  401 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~iRi~~~~~~~~l~~~l~~l  401 (415)
                       +..++...++ ++||.++++..+ +.++++||+++. .++++.+++.|
T Consensus       305 -~~~~l~~~L~-~~gi~vr~~~~~~~~~~~iRis~~~-~~e~~~l~~al  350 (351)
T PRK01688        305 -ASSAVFKSLW-DQGIILRDQNKQPGLSNCLRITIGT-REECQRVIDAL  350 (351)
T ss_pred             -CHHHHHHHHH-HCCeEEEECCCcCCCCCeEEEeCCC-HHHHHHHHHhh
Confidence             3566777765 679999977654 557899999984 57888888776

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=1.7e-42  Score=323.35  Aligned_cols=327  Identities=24%  Similarity=0.395  Sum_probs=270.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.++|||++|++.    +++++.+.+++.++..  ....|+++.+ +++|+.+|+++      ++++++|++++|+++++
T Consensus        18 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~l   84 (346)
T TIGR01141        18 GKEVIKLNSNENP----FGPPPKAKEALRAEAD--KLHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEII   84 (346)
T ss_pred             CCceEEccCCCCC----CCCCHHHHHHHHHhHH--HhhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHHH
Confidence            4679999999964    6778899999998764  2357887665 89999999998      46789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.++.++||+|++++|+|+.+...++..|.++..++.+.+  +.+|++++++.++++++++++++|+||||.+++.+
T Consensus        85 ~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~  162 (346)
T TIGR01141        85 ELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRS  162 (346)
T ss_pred             HHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999888888999999999987543  56899999998888899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++.++++.|+ +|+++|+|++|..+...+. ..+  .....+++++++|+||.|+++|+|+||+++++        ++.+
T Consensus       163 ~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~-~~~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~  230 (346)
T TIGR01141       163 DIEAVLERTP-EDALVVVDEAYGEFSGEPS-TLP--LLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--------EIID  230 (346)
T ss_pred             HHHHHHHhCC-CCcEEEEECchhhhcCCcc-HHH--HHhhCCCEEEEehhhHhhhchhhhceeeecCH--------HHHH
Confidence            9999999987 7999999999997664321 111  12223468999999999999999999999864        6777


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .++.... .++.++++|.++..+++..  .++++.+++++++++.+.+.|++++++. + .|.+|+|+|+.++.      
T Consensus       231 ~~~~~~~-~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~~g~~~~~~~~~------  299 (346)
T TIGR01141       231 ALNKVRA-PFNLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLE-V-YPSDANFVLIRFPR------  299 (346)
T ss_pred             HHHhccC-CCCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCCcCCEEEEecCC------
Confidence            7766543 3566788999998888753  4688889999999999999999887877 4 56678899998863      


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEeeCChhhHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFAVDPYSLEECLDRI  401 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~l~~~l~~l  401 (415)
                       +..++...+ .++||.+.||..|+. ++++|++++ ++++++++++.|
T Consensus       300 -~~~~~~~~L-~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l  345 (346)
T TIGR01141       300 -DADALFEAL-LEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL  345 (346)
T ss_pred             -CHHHHHHHH-HHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence             356676666 467999999988743 789999987 678888888776

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=1.4e-41  Score=316.96  Aligned_cols=324  Identities=17%  Similarity=0.214  Sum_probs=258.0

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +++++||+.|.+.    +++++.+++++.+.+..  ...|+++.|..++|+++++++      ++++++|++|+|+++++
T Consensus        21 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al   88 (349)
T PRK07908         21 GPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF   88 (349)
T ss_pred             CCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            6789999999864    66788899999988753  457998889999999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .+++. + ++ +.++++.|+|..+...++..|.++..++.+.  ++.+|++.+    ++++++++++|||||||.++|.+
T Consensus        89 ~~~~~-l-~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~  159 (349)
T PRK07908         89 ALLAR-L-RP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE  159 (349)
T ss_pred             HHHHh-c-CC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence            99988 4 56 4677789999999999999999999998754  267888755    34678999999999999999987


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++.++   |+ ++.++|+||+|.++.. +. ..++...+ .+++++++||||.|+++|+|+||++++.        ++++
T Consensus       160 ~l~~l---~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~~-~~~~i~i~S~SK~~~l~GlRiG~~~~~~--------~~~~  224 (349)
T PRK07908        160 QLLAL---RR-PGRILVVDEAFADAVP-GE-PESLAGDD-LPGVLVLRSLTKTWSLAGLRVGYALGAP--------DVLA  224 (349)
T ss_pred             HHHHH---Hh-cCCEEEEECcchhhcc-CC-cccccccc-CCCEEEEeecccccCCccceeeeeecCH--------HHHH
Confidence            66555   54 4788999999998753 22 33443332 3479999999999999999999999864        6777


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+..... .+..++..+.++..+++.....++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++.      
T Consensus       225 ~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~~~~~~~~~------  295 (349)
T PRK07908        225 RLTRGRA-HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPAAAPFVLVRVPD------  295 (349)
T ss_pred             HHHhcCC-CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCCCceEEEEECCc------
Confidence            7776543 245667778888777764445778889999999999999999988 777 5477899999998862      


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                        .. .+...++++||.+.||..|+.  +++|||+++ ++++++.+++.|++++.
T Consensus       296 --~~-~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        296 --AE-LLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEILK  346 (349)
T ss_pred             --HH-HHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence              33 445556788999999998853  689999995 45677777777776643

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=1.6e-41  Score=317.17  Aligned_cols=329  Identities=22%  Similarity=0.298  Sum_probs=266.3

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      ..+++|+.|.+.    +++++.+++++.+.+.  ....|++ .|..++|+.+|+++      ++++++|++++|+++++.
T Consensus        22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~y~~-~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~   88 (352)
T PRK03321         22 PGAIKLSSNETP----FGPLPSVRAAIARAAA--GVNRYPD-MGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ   88 (352)
T ss_pred             ccceeccCCCCC----CCCCHHHHHHHHHHHH--hcCcCCC-CcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence            468999999865    6667889999988775  3456865 69999999999998      467889999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      .++..+.++||+|+++.|+|..+...++..|.+++.++.+++  +.+|++.+++.++++++++++++|+||||.+++.++
T Consensus        89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~  166 (352)
T PRK03321         89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE  166 (352)
T ss_pred             HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence            999999999999999999999888888999999999987543  568999999999888999999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +.++++.| ++++++|+||+|.++.+++....++..+...+++++++||||.|+++|+|+||+++++        ++++.
T Consensus       167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~~  237 (352)
T PRK03321        167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--------EVIAA  237 (352)
T ss_pred             HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--------HHHHH
Confidence            99999876 4699999999999988765433334444555789999999999999999999999864        67888


Q ss_pred             HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936          275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII  354 (415)
Q Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~  354 (415)
                      +.... ...+.+.++|.++..+|..  .+.+.+..+.+.++++.+.+.|++. ++. + .+.+|+|+|++++.       
T Consensus       238 ~~~~~-~~~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-~~~-~-~~~~g~~i~i~l~~-------  304 (352)
T PRK03321        238 LRKVA-VPFSVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAA-GWT-V-PPSQANFVWLPLGE-------  304 (352)
T ss_pred             HHHhc-CCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCCCEEEEeCCC-------
Confidence            77653 2467788999888888864  2334455555666778888999887 666 4 45678999998852       


Q ss_pred             CHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          355 DDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       355 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      +..++...+ +++||.+.+   |+ ..+|||+++ +.++.+.++++|.+++.
T Consensus       305 ~~~~~~~~l-~~~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~  350 (352)
T PRK03321        305 RTADFAAAA-AEAGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA  350 (352)
T ss_pred             CHHHHHHHH-HHCCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence            456677665 678999987   33 357999984 56777888888877643

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-41  Score=317.02  Aligned_cols=320  Identities=18%  Similarity=0.270  Sum_probs=252.8

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      ...++|+.|.+.    +++++.+      ..  ..+..|+++ +.++||+++|+++      ++++++|++|+|+++++.
T Consensus        31 ~~~~~l~~ne~~----~~~~~~~------~~--~~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i~   91 (354)
T PRK04635         31 RGDIWINANESP----FNNEYKL------DL--ARLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAIE   91 (354)
T ss_pred             CCcEEeeCCCCC----CCCChhh------hh--HHhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHHH
Confidence            456999999864    4444432      11  134679886 5799999999998      689999999999999999


Q ss_pred             HHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       115 ~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .++.+++++| |+|+++.|+|..|...++..|++++.++.+.  ++.+|++.++. + ++++++++++||||||.+++.+
T Consensus        92 ~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~  167 (354)
T PRK04635         92 LLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRA  167 (354)
T ss_pred             HHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHH
Confidence            9999999998 8999999999999999999999999998753  46789988874 4 5789999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|+++|+  ++++|+||+|..+.... ....  .....+++++++||||+|+++|+|+||+++++        ++++
T Consensus       168 ~l~~l~~~~~--~~~vivDeay~~~~~~~-s~~~--~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--------~~~~  234 (354)
T PRK04635        168 DIEQLIEMTP--DAIVVVDEAYIEFCPEY-SVAD--LLASYPNLVVLRTLSKAFALAGARCGFTLANE--------ELIE  234 (354)
T ss_pred             HHHHHHHhCC--CcEEEEeCchHhhccCc-chHH--HHhhCCCEEEEechHHHhhhhHHHHhhhhCCH--------HHHH
Confidence            9999999887  49999999999876321 1111  12334678999999999999999999999865        6777


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+..... .++.+...|.++.++|.+...+++++..+.++++++.+.+.|++++++. + .|..|.|+|++++       
T Consensus       235 ~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~g~f~~~~~~-------  304 (354)
T PRK04635        235 ILMRVIA-PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAK-V-LEGNGNYVLAKFD-------  304 (354)
T ss_pred             HHHhhcC-CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCcEEEEECC-------
Confidence            7765433 3556777888888888754445677888889999999999999986566 4 3456789998875       


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                       +..++.. ++.++||.+.++..++.++++|||++ +.++++.+++.|++
T Consensus       305 -~~~~~~~-~l~~~gv~v~~~~~~~~~~~lRis~~-~~e~~~~l~~al~~  351 (354)
T PRK04635        305 -DVDAVFK-ALWDAGIVARAYKDPRLANCIRFSFS-NRAETDKLIGLIRN  351 (354)
T ss_pred             -CHHHHHH-HHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHH
Confidence             2445544 55778999987655555789999996 46778888877754

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=5.2e-41  Score=310.39  Aligned_cols=313  Identities=17%  Similarity=0.201  Sum_probs=241.4

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      .+++|+.+.+.    ++             ....+..|+++ ...+||+++|+++      ++++++|++|+|+++++..
T Consensus        17 ~~i~l~~Nenp----~~-------------~~~~~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~   72 (332)
T PRK06425         17 RIIDFSANIND----FM-------------DIGDISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYR   72 (332)
T ss_pred             CEEEeccccCC----Cc-------------ChhhcccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence            57999999843    21             00134578875 4789999999998      6789999999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936          116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (415)
Q Consensus       116 ~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  195 (415)
                      ++.. .++| .|++++|+|+.|...++..|+++..+|.+.   +..|.+.+++   .+++++++++||||||.+++.+++
T Consensus        73 ~~~~-~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~  144 (332)
T PRK06425         73 LLSY-INVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSL  144 (332)
T ss_pred             HHHH-hCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHH
Confidence            9974 5776 577779999999999999999999999753   3456666553   377899999999999999999999


Q ss_pred             HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH
Q 014936          196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM  275 (415)
Q Consensus       196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~  275 (415)
                      ++|+++|+++++++|+||+|.++.+++. ..........+++|+++||||.|+++|+|+||+++++        ++++.+
T Consensus       145 ~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--------~li~~l  215 (332)
T PRK06425        145 LTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--------YNMKIS  215 (332)
T ss_pred             HHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH--------HHHHHH
Confidence            9999999999999999999999886532 1112222334689999999999999999999999965        678877


Q ss_pred             HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCC
Q 014936          276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIID  355 (415)
Q Consensus       276 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~  355 (415)
                      ..... .+..+...+.++.. .  ..+.++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++        +
T Consensus       216 ~~~~~-~~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~g~f~~~~~~--------~  281 (332)
T PRK06425        216 RKITE-PWSVCDPAIDFIRS-I--DLDYVAKHSLDIMENERSYLINNLEAM-GFR-AAGDPSANFITFMIP--------D  281 (332)
T ss_pred             HHcCC-CCccCHHHHHHHHH-h--hhHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCCCCceEEEEEcC--------C
Confidence            76533 23333333332221 1  113566788899999999999999988 676 334567889999875        3


Q ss_pred             HHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          356 DIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       356 ~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                      +.++...++ ++||.+.||..|+.  ++++||+++.+ ++.+.+++.|++++
T Consensus       282 ~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRis~~~~-~~~~~l~~al~~~~  331 (332)
T PRK06425        282 AHDFYSYLL-KNGILVRLLDDYECLGEQYIRIAIRRR-SFNIKLVNALRNFL  331 (332)
T ss_pred             HHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence            567777775 46999999998853  47999999754 56788888877653

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=6.2e-41  Score=314.65  Aligned_cols=325  Identities=21%  Similarity=0.354  Sum_probs=261.5

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE-eCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i-~~g~~~a  112 (415)
                      +.++++|+.|++.    +++++.+++++.+.+..  ...|+++. .+++|+++|+++      +++++++++ ++|++++
T Consensus        33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~   99 (361)
T PRK00950         33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV   99 (361)
T ss_pred             ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence            4588999999854    66788899998887663  35788754 499999999998      568899999 7899999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..+++++.++||+|+++.|+|..+...++..|++++.++.  ++++.+|++.+++.++++++++++++|+||||.+++.
T Consensus       100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~  177 (361)
T PRK00950        100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE  177 (361)
T ss_pred             HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence            99999999999999999999999998889999999998874  3456799999999988788999999999999999998


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++.++++   ++|+++|+||+|.++.  +....++  ....+++++++||||.|+++|+|+||+++++        +++
T Consensus       178 ~~l~~l~~---~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~~  242 (361)
T PRK00950        178 EDIRKILE---STDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--------WLI  242 (361)
T ss_pred             HHHHHHHH---HCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--------HHH
Confidence            87776654   6799999999998865  2222221  2233578999999999999999999999865        677


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.++.... ....+++.|.++..+++.  .+++++..++++++++.+.+.|+    +. + .|.+++|+|++++.     
T Consensus       243 ~~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~----~~-~-~~~~~~~i~~~~~~-----  308 (361)
T PRK00950        243 DYYMRAKT-PFSLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP----FK-V-YPSEANFVLVDVTP-----  308 (361)
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC----ee-E-CCCcceEEEEECCC-----
Confidence            77776543 245678888888888865  46788888888888888887775    34 3 56788999998842     


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                       .+..++...++ ++||.+.||..|+.  ++++|++++ +.++++++++.|++++
T Consensus       309 -~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il  360 (361)
T PRK00950        309 -MTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV  360 (361)
T ss_pred             -CCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence             25677777775 56999999987754  579999998 4568899999888764

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=8.1e-41  Score=308.85  Aligned_cols=317  Identities=16%  Similarity=0.239  Sum_probs=249.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .+.++++|+.|+|.    +++++.+++++.+.+....+..|+++ +.++||+++++|+++..   +++++|++|+|++++
T Consensus        17 ~~~~~i~l~~~~~~----~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~   88 (335)
T PRK14808         17 EKRDRTYLALNENP----FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI   88 (335)
T ss_pred             CCCceeEecCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence            46789999999965    78889999999887765445568765 89999999999996532   689999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.++    |.|++++|+|..+...++..|+++..++.+.+  +.++...    + ..++++++++||||||.+++.
T Consensus        89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~  157 (335)
T PRK14808         89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----V-GEGDVVFIPNPNNPTGHVFER  157 (335)
T ss_pred             HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence            99999887    67999999999999999999999999987542  3343222    2 246889999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++++|+    ++++++|+||+|.++.  +....+  .+...+++++++||||+|+++|+|+||+++++        +++
T Consensus       158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~--~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--------~~~  221 (335)
T PRK14808        158 EEIERIL----KTGAFVALDEAYYEFH--GESYVD--LLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--------KFI  221 (335)
T ss_pred             HHHHHHH----hcCCEEEEECchhhhc--CCchHH--HHHhCCCEEEEEechhhccCcccceEEEEeCH--------HHH
Confidence            9998887    4699999999999864  222212  12234589999999999999999999999965        688


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.+..... .++.+.++|.++..++++  .++.++..+.++++++.+.+.|+++ ++. + .+..|.|+|+.++.     
T Consensus       222 ~~l~~~~~-~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~~~g~f~~~~l~~-----  290 (335)
T PRK14808        222 DAYNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFIFMEK-----  290 (335)
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-CCCCCeEEEEeCCC-----
Confidence            88876553 356778889998888864  3567777888888899999999988 676 4 34467899998863     


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                       .+..++.. .+.++||.|..   |  .+++||+++.. ++.+.+++.|++
T Consensus       291 -~~~~~~~~-~l~~~Gi~V~~---~--~~~~Risi~~~-~~~~~~~~~l~~  333 (335)
T PRK14808        291 -EEKERLLE-HLRAKNIAVRS---F--REGVRITIGKR-EENDMILKELEV  333 (335)
T ss_pred             -ccHHHHHH-HHHHCCeEEEE---C--CCCeEEecCCH-HHHHHHHHHHHh
Confidence             13445555 45678999985   2  37899998654 666777777764

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.7e-40  Score=304.43  Aligned_cols=316  Identities=21%  Similarity=0.316  Sum_probs=247.3

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +...++|+.|.+.    +++++.+.+++.+.+.......|++ .|.+++|+++++++      ++++++|++|+|+++++
T Consensus        17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l   85 (337)
T PRK03967         17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELI   85 (337)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence            3467999999864    6778889999988876544568875 68999999999999      47899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++..+  +||+|+++.|+|..+...++..|.+++.++.+  .++.+|++.+++.. ++++++++++|+||||.+++.+
T Consensus        86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~  160 (337)
T PRK03967         86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE  160 (337)
T ss_pred             HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence            9888776  79999999999999888889999999999875  34679999998865 4678889999999999999988


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++.+++    ++++++|+||+|.++..  ....+  .....+++++++||||.|+++|+|+||+++++        ++++
T Consensus       161 ~l~~i~----~~~~~ii~De~y~~~~~--~~~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--------~~i~  224 (337)
T PRK03967        161 EILKVL----ETGKPVVLDEAYAEFSG--KSLIG--LIDEYPNLILLRTFSKAFGLAGIRAGYAIANE--------EIID  224 (337)
T ss_pred             HHHHHH----hcCCEEEEECchhhhcc--cchHH--HHhhCCCEEEEecchHhhcchhhhheeeecCH--------HHHH
Confidence            777765    36999999999998652  22211  12334679999999999999999999999865        6788


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+..... .++.+.++|.++..+|++  .+++.+..+.+.++++.+.+.|.+.     . .|.+++|+|++++       
T Consensus       225 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~~~~~~~~~~-------  288 (337)
T PRK03967        225 ALYRIKP-PFSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEY-----A-YPSDANFLLLKLD-------  288 (337)
T ss_pred             HHHhhcC-CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccC-----c-CCCCCcEEEEhHH-------
Confidence            8877654 356788999999999974  3566666677778888888888654     2 5788999997652       


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                           +...++ ++||.+.++.. ...+++||+++.. ++.+++++.|..+.
T Consensus       289 -----~~~~l~-~~gi~v~~~~~-~~~~~~Ri~~~~~-~~~~~l~~~l~~~~  332 (337)
T PRK03967        289 -----AYDYLL-ENGIVVRKLSG-RLEGHIRVTVGKR-EENDEFIKALKEIK  332 (337)
T ss_pred             -----HHHHHH-HCCEEEEeCCC-CCCCeEEEecCCH-HHHHHHHHHHHHHH
Confidence                 345554 56999987653 2357999999752 33345555554443

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2.3e-40  Score=306.13  Aligned_cols=310  Identities=13%  Similarity=0.123  Sum_probs=242.7

Q ss_pred             cceeEecccCCCCCCCCCCc-HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTT-HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQA  112 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~a  112 (415)
                      ..+++|+.+.+.    ++++ +.+ .+  .     .+..|+++ . .+||+++|+++      ++. +++|++|+|++++
T Consensus        24 ~~~i~ls~Nenp----~~~~~~~~-~~--~-----~~~~Yp~~-~-~~L~~~ia~~~------~~~~~~~I~i~~Gs~e~   83 (339)
T PRK06959         24 DAWLDLSTGINP----HGYPVPPV-PA--D-----AWRRLPED-D-DGLAACAARYY------GAPDAAHVLPVAGSQAA   83 (339)
T ss_pred             hhhceeccCCCC----CCCCCCCC-CH--H-----HHHhCCCc-h-HHHHHHHHHHh------CCCCcccEEECcCHHHH
Confidence            567999999854    3333 211 11  1     13468875 3 89999999998      454 5899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..+.. ++++|+ |+++.|+|+.|...++..|++++.++.+.        +.+    .+..+.+++++||||||.+++.
T Consensus        84 i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~  149 (339)
T PRK06959         84 IRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPA  149 (339)
T ss_pred             HHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCH
Confidence            997765 567776 88999999999999999999998876532        222    2234689999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++++++++.|.+++.++|+||+|.++...    .++..+...+++++++||||.|+++|+|+||++++.        +++
T Consensus       150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--------~li  217 (339)
T PRK06959        150 ARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--------ALL  217 (339)
T ss_pred             HHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecCH--------HHH
Confidence            99999999999989999999999997632    233333234679999999999999999999999865        688


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.++.... .+..+.++|.++.++|++  ..+.++.++.++++++.+.+.|+++ ++. + . .+++|+|++++      
T Consensus       218 ~~l~~~~~-~~~vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~-~~~~f~~~~~~------  284 (339)
T PRK06959        218 AALRDALG-AWTVSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAH-GFA-V-H-ATPLFSWTDDP------  284 (339)
T ss_pred             HHHHHhcC-CCCCcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-c-CcceEEEEeCC------
Confidence            88887654 456788899999999975  4678888999999999999999998 776 3 2 35789998774      


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                        +..++...+ .++||.++.   |+..+++||+++.+.++.+.+++.|+++++.+.
T Consensus       285 --~~~~l~~~l-~~~GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~  335 (339)
T PRK06959        285 --RAAALHAAL-ARRGIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLA  335 (339)
T ss_pred             --CHHHHHHHH-HhCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence              345666665 567999974   344679999997677788899888887776654

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=9e-40  Score=301.67  Aligned_cols=307  Identities=14%  Similarity=0.163  Sum_probs=236.4

Q ss_pred             cceeEecccCCCCCCCCCCc-HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTT-HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ..+++|+.|.+.    ++++ +.+.+   ..     ...|+..  ..+||++|++++        .+++|++|+|+++++
T Consensus        20 ~~~i~l~~ne~p----~~~~~~~~~~---~~-----~~~yp~~--~~~Lr~~ia~~~--------~~~~I~it~Gs~~al   77 (330)
T PRK05664         20 ADWLDLSTGIAP----WPWPVPAIPA---DA-----WARLPET--DDGLEAAARAYY--------GAPQLLPVAGSQAAI   77 (330)
T ss_pred             HHheeecCCcCC----CCCCCcccCH---HH-----HHhCCCC--hHHHHHHHHHHh--------CCCCEEECcCHHHHH
Confidence            457999999632    2222 22211   11     2247653  389999999998        357999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .+++.  ..+||+|++++|+|+.+...++..|++++.++.          +++++.++ +++++++++||||||.+++.+
T Consensus        78 ~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~-~~~~v~l~nP~NPTG~~~s~~  144 (330)
T PRK05664         78 QALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD-SLDVLVVVNPNNPTGRRFDPA  144 (330)
T ss_pred             HHHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc-CCCEEEEeCCcCCCCCccCHH
Confidence            98863  479999999999999999999999999988864          23444443 577899999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|+++|+++++++|+||+|..+.    ...++..+...+++++++||||.|+++|+|+||++++.        ++++
T Consensus       145 ~l~~l~~~~~~~~~~iI~DE~y~~~~----~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--------~l~~  212 (330)
T PRK05664        145 RLLAWHARLAARGGWLVVDEAFMDNT----PQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--------ALLR  212 (330)
T ss_pred             HHHHHHHHHHhcCCEEEEECCcccCC----CcccccccccCCCEEEEeeccccccCCCcceEEEEeCH--------HHHH
Confidence            99999999999999999999998654    11244455555689999999999999999999999965        6788


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .+..... .+..+...|.++..+|.+.  .+.++.++.++++++.+.+.|+++ ++. . .+..++|+|++++       
T Consensus       213 ~~~~~~~-~~~~~~~~~~~~~~~L~~~--~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~-~~~~~~f~~~~~~-------  279 (330)
T PRK05664        213 ALAELLG-PWTVSGPTRWLAQAALADT--PWQRRQRERLLAASQRLAALLRRH-GLT-P-AGGCALFQWVRTE-------  279 (330)
T ss_pred             HHHHhcC-CCCCCHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-cCCcceEEEEecC-------
Confidence            8876643 3466788899999999753  566788899999999999999987 554 2 2333478887763       


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                       +..++...+ .++||.+.+   |+..+++||+++.+.++.+++++.|+.+.+
T Consensus       280 -~~~~~~~~l-~~~gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~  327 (330)
T PRK05664        280 -DAAALHEFL-ARRGILTRL---FEQPASLRFGLPADEADWARLDQALLAYRK  327 (330)
T ss_pred             -CHHHHHHHH-HHCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHh
Confidence             355665554 677999975   445689999998666667777777665544

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=6.3e-40  Score=302.91  Aligned_cols=311  Identities=19%  Similarity=0.232  Sum_probs=250.2

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +++.++|+.|.+.    ++++  ..+...     ..+..|+++.+ +++|+.+++++      ++++++|++|+|+++++
T Consensus        16 ~~~~~~~~~~~~~----~~~~--~~~~~~-----~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~i   77 (330)
T TIGR01140        16 PEDWLDFSTGINP----LGPP--VPPIPA-----SAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEAI   77 (330)
T ss_pred             hhheeEccccCCC----CCCC--hhhcch-----HHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence            5578999999854    2222  222111     13457888765 99999999998      46789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .++..++ .+| .|++++|+|..+...++..|.++..++         |++.+++.++ +++++++++|+||||.+++.+
T Consensus        78 ~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~  145 (330)
T TIGR01140        78 YLLPRLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPE  145 (330)
T ss_pred             HHHHHHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHH
Confidence            9987664 677 799999999999999999999988875         7888988884 577899999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++++|+++|+++|+++|+||+|..+.+..    ++..+ +..+++++++||||.|+++|+|+||+++++        +++
T Consensus       146 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--------~~~  213 (330)
T TIGR01140       146 TLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--------ALL  213 (330)
T ss_pred             HHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--------HHH
Confidence            99999999999999999999999877531    22222 234678999999999999999999999865        677


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.+..... .++.++++|.++..++++  .++.++.+++++++++.+.+.|++++.+. + .|.+|+|+|++++      
T Consensus       214 ~~l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~f~~~~~~------  282 (330)
T TIGR01140       214 ARLREALG-PWTVNGPARAAGRAALAD--TAWQAATRARLAAERARLAALLARLGGLE-V-VGGTALFLLVRTP------  282 (330)
T ss_pred             HHHHhcCC-CCCchHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCeEEEEEcC------
Confidence            77776543 356788899999999975  35677888999999999999999986565 4 5678999999875      


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRI  401 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l  401 (415)
                        +..++.+.++ ++||.+.||..|..  .+++||+++.+.++ +.++++|
T Consensus       283 --~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l  329 (330)
T TIGR01140       283 --DAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL  329 (330)
T ss_pred             --CHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence              3567777775 56999999999853  57999999876665 7776665

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=6.5e-39  Score=293.66  Aligned_cols=301  Identities=19%  Similarity=0.269  Sum_probs=225.1

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +..++++|+.|.+.    ++ ++.+.+++.+.+..  ...|+.   ...+|++++++++         ++|++|+|++++
T Consensus         6 ~~~~~i~l~~~~np----~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~a   66 (311)
T PRK08354          6 REEGLIDFSASVNP----YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEA   66 (311)
T ss_pred             CccceeEecCCCCC----CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHH
Confidence            45678999999643    33 47889999877553  346764   3789999999982         479999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++..+ .+||+|++++|+|+.+...++..|.++..++        +|++.+++.++ +++.+++++||||||.+++.
T Consensus        67 l~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~  136 (311)
T PRK08354         67 LYLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNF  136 (311)
T ss_pred             HHHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCH
Confidence            99888655 4899999999999999999999999987642        57888988876 56789999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++++|+++|+++|+++|+||+|.++.+++..      . ..+++++++||||.|+++|+|+||+++           +.
T Consensus       137 ~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~------~-~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~  198 (311)
T PRK08354        137 KELKPLLDAVEDRNALLILDEAFIDFVKKPES------P-EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FE  198 (311)
T ss_pred             HHHHHHHHHhhhcCcEEEEeCcchhccccccc------c-CCCcEEEEeccHhhcCCccceeeeeee-----------hH
Confidence            99999999999999999999999998876421      1 145799999999999999999999997           23


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.++.... .+..+...+.++..+++. ..+++.+.++.+++.++.+.+.+        ...|. +.|+|++++      
T Consensus       199 ~~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l--------~~~~~-~~~~~~~~~------  261 (311)
T PRK08354        199 EAFRSVRM-PWSIGSTGYAFLEFLIED-DFEHLRKTMPLIWREKERFEKAL--------YVKSD-ANFFIKDVG------  261 (311)
T ss_pred             HHHHHcCC-CccCCHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhc--------CCCCC-CcEEEEECC------
Confidence            44544432 344555667777666653 22444555555555544443322        11344 455556553      


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCCh--hhHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDP--YSLEECLDR  400 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~--~~l~~~l~~  400 (415)
                        ++.++...+ .++||.+.||..|+.++++||+++.++  +.+..+++.
T Consensus       262 --~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~  308 (311)
T PRK08354        262 --DAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRDREENEKLIRALRE  308 (311)
T ss_pred             --CHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCCHHHHHHHHHHHHH
Confidence              356676665 567999999999987899999997543  444444443

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=7.9e-39  Score=282.54  Aligned_cols=329  Identities=19%  Similarity=0.274  Sum_probs=267.1

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEE
Q 014936           71 NGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR  149 (415)
Q Consensus        71 ~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~  149 (415)
                      .+|+...|.++|...+.++........ ...-+|++|+|.+.++..+++.++++||.|+++.++|.+.....+..|++++
T Consensus        94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i  173 (472)
T KOG0634|consen   94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII  173 (472)
T ss_pred             hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence            589999999999999999765233323 3445999999999999999999999999999999999999999999998888


Q ss_pred             EeeccCCCCCCCChhHHHhhcCCCc--------eEEEecCC--CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936          150 HFDLLPDKGWEVDLDDIESLADQNT--------VALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV  219 (415)
Q Consensus       150 ~~~~~~~~~~~~~~~~l~~~~~~~~--------~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~  219 (415)
                      .|+.+   ..++++|.|++.++...        .-|+.+-|  +||||..++.+..++|.++|++|+++||+||.|..+.
T Consensus       174 pv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq  250 (472)
T KOG0634|consen  174 PVKMD---QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQ  250 (472)
T ss_pred             ecccc---CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceee
Confidence            88773   44689999998775311        23666666  8999999999999999999999999999999999999


Q ss_pred             cCC---CC----------------cccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-c
Q 014936          220 FGD---KP----------------FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-F  279 (415)
Q Consensus       220 ~~~---~~----------------~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~  279 (415)
                      ++.   ..                ..++.+++.+.+||.+.||||. .+||+|+||+.+++        .+++++-.. .
T Consensus       251 ~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~--------~~l~ril~~ae  321 (472)
T KOG0634|consen  251 MNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS--------LFLKRILDLAE  321 (472)
T ss_pred             ccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH--------HHHHHHhhhcc
Confidence            873   11                2234556778899999999999 79999999999976        456665554 3


Q ss_pred             cccCCchhHHHHHHHHhhCCCcH----HHHHHHHHHHHHHHHHHHHHhhc-CCCC-cCCCCCCCceEEEEecCcccc---
Q 014936          280 DILGDPATFIQAAVPSILQQPDE----VFFKKTLNLLKQSVDICYNKIKE-IPCI-SCPHKPEGSMAVMLKLNLSLL---  350 (415)
Q Consensus       280 ~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~-~~~~-~~~~~p~~g~~~~~~l~~~~~---  350 (415)
                      ..+.+++..+|..+.+.|+...+    +|+.+.+..+..++..+..++.+ +|.- ..+..|.+|+|+|++++-..+   
T Consensus       322 ~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~  401 (472)
T KOG0634|consen  322 VATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTK  401 (472)
T ss_pred             eeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccc
Confidence            34566888999999999887654    67788888899999999999986 6654 336689999999999972111   


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC------C-CeEEEEee-CChhhHHHHHHHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL------K-NWLRVTFA-VDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~-~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                      ++..+.++++...+.++||.+.+|..|..      . -++|++++ .+.|+++++++++..+++++...
T Consensus       402 ~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~~  470 (472)
T KOG0634|consen  402 KSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFIT  470 (472)
T ss_pred             cchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhhc
Confidence            12223567778888899999999998854      2 38999996 67899999999999999987654

>cd00609 AAT_like Aspartate aminotransferase family

Probab=100.00  E-value=1.8e-36  Score=283.70  Aligned_cols=346  Identities=32%  Similarity=0.541  Sum_probs=277.5

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHH
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM  117 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~  117 (415)
                      +||+.|++.    +.+++.+++++.+.........|++..|..++++.++++++...+....++++++++|+++++..++
T Consensus         1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~   76 (350)
T cd00609           1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL   76 (350)
T ss_pred             CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence            478888854    4556666666655222223457888899999999999999987665566889999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHH
Q 014936          118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK  197 (415)
Q Consensus       118 ~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~  197 (415)
                      .++.++||+|+++.++|.++...++..|.++..++.+.......+.+.++....++++++++++|+||||.++|.+++++
T Consensus        77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~  156 (350)
T cd00609          77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE  156 (350)
T ss_pred             HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence            99999999999999999999999999999999999865443322226677777778999999999999999999999999


Q ss_pred             HHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh
Q 014936          198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK  277 (415)
Q Consensus       198 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  277 (415)
                      |+++|+++|+++|+|++|+.+.+.+.....+...+..+.++++.|++|.++.+|+|+||+++++       +++.+.+..
T Consensus       157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~-------~~~~~~~~~  229 (350)
T cd00609         157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLKK  229 (350)
T ss_pred             HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH-------HHHHHHHHH
Confidence            9999999999999999999888765543222233344567999999999888999999999864       146677666


Q ss_pred             hcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCH
Q 014936          278 YFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDD  356 (415)
Q Consensus       278 ~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~  356 (415)
                      ... .+.+++...+.++..+++... ++.++..++++++++.+.+.|++++... ...+..|+++|++++..      ..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~g~~~~~~~~~~------~~  301 (350)
T cd00609         230 LLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEG------DD  301 (350)
T ss_pred             HHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCccEEEEEecCCC------Ch
Confidence            533 246778889999998988643 6788889999999999999999875443 23678899999988642      24


Q ss_pred             HHHHHHHHhhcCeEEEcCCCCC--CCCeEEEEeeCChhhHHHHHHHHH
Q 014936          357 IDFCFKLAKEESVIILPGTAVG--LKNWLRVTFAVDPYSLEECLDRIK  402 (415)
Q Consensus       357 ~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~l~~~l~~l~  402 (415)
                      .+.+.+++.++||.+.++..|.  .+.++|++++..+++++.++++|+
T Consensus       302 ~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~  349 (350)
T cd00609         302 EEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA  349 (350)
T ss_pred             HHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence            5677778888999999988776  578999999766999999999885

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=100.00  E-value=7.6e-35  Score=277.03  Aligned_cols=345  Identities=14%  Similarity=0.117  Sum_probs=255.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcH---HHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTH---VATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~---~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+.++++|+.|+|.+.  +.+++   ++.+++.+++..+. ..|++..|.++||+++++++        ..+++++|+|+
T Consensus        34 ~g~~~~~L~~g~p~~D--~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~--------~~~~vv~t~gg  102 (460)
T PRK13238         34 AGYNPFLLKSEDVFID--LLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIF--------GYPYTIPTHQG  102 (460)
T ss_pred             cCCCEEeCCCCCCCCC--CCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHh--------CCCcEEECCCH
Confidence            4889999999998422  44433   67888888876554 47999999999999999999        34689999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC------CCCC--CChhHHHhhcCC----CceEE
Q 014936          110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD------KGWE--VDLDDIESLADQ----NTVAL  177 (415)
Q Consensus       110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~------~~~~--~~~~~l~~~~~~----~~~~v  177 (415)
                      ++++.+++.+++++|| |++++|.|..+.......|++++.++.++.      ++|.  +|+++|++.+++    ++++|
T Consensus       103 t~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~I  181 (460)
T PRK13238        103 RAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFI  181 (460)
T ss_pred             HHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEE
Confidence            9999999999999999 999999999999989999999999988542      3444  999999999874    68999


Q ss_pred             EecCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCC--cccCC-----CCcccccccCCCCCeEEEccCccccCC
Q 014936          178 VIINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGH--LVFGD-----KPFVPMGVFGSTVPILTLGSLSKRWIV  249 (415)
Q Consensus       178 ~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~~~~~-----~~~~~~~~~~~~~~~i~~~s~sK~~~~  249 (415)
                      ++++|+|||| .+++.+++++|+++|++||+++|+|+++..  ..|..     ....++..+     +..++|++|.+.+
T Consensus       182 vl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~~  256 (460)
T PRK13238        182 VMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLTM  256 (460)
T ss_pred             EEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEEE
Confidence            9999999997 999999999999999999999999997742  22321     112222211     1223344444444


Q ss_pred             CCceE------EEEEeeCCCCCCChHHHHHHHHhhc-----cccC-CchhHHHHHHHHhhCCC-cHHHHHHHHHHHHHHH
Q 014936          250 PGWRL------GWFVTTDPCGMFRKPKVVERMKKYF-----DILG-DPATFIQAAVPSILQQP-DEVFFKKTLNLLKQSV  316 (415)
Q Consensus       250 ~G~r~------G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~  316 (415)
                      +|+|.      |++++++       +++.+.++...     ..+. +.+...|.|++..|.+. .+++++.+    .+++
T Consensus       257 Sg~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~  325 (460)
T PRK13238        257 SAKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQV  325 (460)
T ss_pred             ecccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHH
Confidence            44443      4555543       25777776552     1122 33555577777766542 22334333    3367


Q ss_pred             HHHHHHhhcCCCCcCCCCCCCceEEEEecCccc--cCC-CCCHHHHHHHHHhhcCeEEEcCCCCCC-------------C
Q 014936          317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL--LDD-IIDDIDFCFKLAKEESVIILPGTAVGL-------------K  380 (415)
Q Consensus       317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~--~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------~  380 (415)
                      ++|.+.|++. |+. +..|.+|+++++++....  .++ ...+.+++.+|+++.||.+.|++.|..             .
T Consensus       326 ~~l~~~L~~~-G~~-~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~  403 (460)
T PRK13238        326 EYLGEGLEEA-GVP-IQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPA  403 (460)
T ss_pred             HHHHHHHHHC-CCC-eEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCcc
Confidence            8899999887 888 448999999999885421  100 013578999999999999999887642             2


Q ss_pred             CeEEEEeeC---ChhhHHHHHHHHHHHHHH
Q 014936          381 NWLRVTFAV---DPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       381 ~~iRi~~~~---~~~~l~~~l~~l~~~~~~  407 (415)
                      ..+|+++..   +++.++.+.++|..+.++
T Consensus       404 ~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~  433 (460)
T PRK13238        404 ELLRLAIPRRVYTQSHMDYVAEALKAVKEN  433 (460)
T ss_pred             ceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence            689999965   899999999999987743

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=7.2e-34  Score=239.23  Aligned_cols=381  Identities=22%  Similarity=0.315  Sum_probs=271.4

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHH----HHhcC----CCCC
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAE----ALLSE----KFNG   72 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~----~~~~~----~~~~   72 (415)
                      |.+|..|.++. ...++..+++.+-+-++    ....+.++-|+|..      .|++.+..++    .+..+    ...+
T Consensus         1 m~fs~fGdkft-~~sGi~~lMdDl~d~Lr----t~g~imLggGNPa~------iPem~~~f~~~~aemla~~~~~e~~cn   69 (417)
T COG3977           1 MQFSLFGDKFT-RHSGITQLMDDLNDGLR----TPGAIMLGGGNPAR------IPEMDDYFQDLLAEMLASGKATEALCN   69 (417)
T ss_pred             CchhhhhHHhh-hhhhHHHHHHHHHhhcc----CCCceeeCCCCccc------ChhHHHHHHHHHHHHHhcchHHHHHhc
Confidence            44455444432 23567777777777663    45599999999753      3445554443    33332    3578


Q ss_pred             CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC---CC--CEEEEc-CCCCcchHHHHHhCCC
Q 014936           73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR---PG--ANILLP-RPGFPIYELSAAFRHI  146 (415)
Q Consensus        73 y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~---~g--d~vi~~-~p~y~~~~~~~~~~g~  146 (415)
                      |..+.|...|.+++++++++.+|+.+++++|.+|+|++++..-++..+.+   .|  ..|+++ .|.|-+|.+....-.+
T Consensus        70 Y~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~  149 (417)
T COG3977          70 YDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL  149 (417)
T ss_pred             CCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc
Confidence            99999999999999999999999999999999999999999888877753   23  356655 7899887665432222


Q ss_pred             eEEE---eeccCCCC--CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC
Q 014936          147 EVRH---FDLLPDKG--WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG  221 (415)
Q Consensus       147 ~~~~---~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~  221 (415)
                      =|..   +...+.+.  +.+|.++|.  +.+.+.++.++.|.||||.+++.+++.+|.+++++||+++++|.+|+.-- .
T Consensus       150 fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PF-P  226 (417)
T COG3977         150 FVSAKPNIELLPAGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPF-P  226 (417)
T ss_pred             eeeccCCcccccccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCC-C
Confidence            1211   11112222  556777765  34678889999999999999999999999999999999999999997511 1


Q ss_pred             CCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCC
Q 014936          222 DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQP  300 (415)
Q Consensus       222 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~  300 (415)
                      +--+.. ...-..++++.|.|+||. |+||.|+|.++++.        ++++.+..+. ..+..+....++.+..+++.+
T Consensus       227 ~iifsd-~~~~w~~NiilC~SLSK~-GLPG~R~GIiIane--------~viqaitnmn~iisLap~~~G~Aia~~mie~g  296 (417)
T COG3977         227 GIIFSD-ATPLWNENIILCMSLSKL-GLPGSRCGIIIANE--------KVIQAITNMNGIISLAPGRMGPAIAAEMIESG  296 (417)
T ss_pred             ceeccc-ccccCCCCEEEEeehhhc-CCCCcceeEEEccH--------HHHHHHHhccceeeecCCCccHHHHHHHhhcc
Confidence            111111 122345789999999998 99999999999865        6888887763 344567778888888888875


Q ss_pred             cH-HHHHH-HHHHHHHHHHHHHHHhhc-CCCCcC-CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936          301 DE-VFFKK-TLNLLKQSVDICYNKIKE-IPCISC-PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA  376 (415)
Q Consensus       301 ~~-~~~~~-~~~~~~~~~~~l~~~l~~-~~~~~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~  376 (415)
                      .- ..-++ .+--++++.....+.|++ +|...+ ...|+++.|+|+.+.+-..    +..++.++ |++.||.++||..
T Consensus       297 dl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI----tt~~LYq~-LKa~Gvl~VPG~~  371 (417)
T COG3977         297 DLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI----TTEELYQR-LKARGVLMVPGHY  371 (417)
T ss_pred             hHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC----CHHHHHHH-HHhCeEEEecccc
Confidence            41 11122 223445555555555553 443222 3479999999998875432    45566555 4788999999998


Q ss_pred             CCC---------CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936          377 VGL---------KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       377 ~~~---------~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      |..         ..|+|+++.-+++++++.+.+|++.+++.-+
T Consensus       372 FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~yq  414 (417)
T COG3977         372 FFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVERAYQ  414 (417)
T ss_pred             cCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHHHHh
Confidence            864         4799999999999999999999999887554

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=100.00  E-value=2.6e-33  Score=258.15  Aligned_cols=309  Identities=17%  Similarity=0.152  Sum_probs=232.0

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEE
Q 014936           48 HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI  127 (415)
Q Consensus        48 ~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~v  127 (415)
                      +.++..+|.++++..+.++..  .  +...-+.+|++.+|+|+      +++++++++++|+++++..++.++.++||.|
T Consensus        29 ylgl~~~~~~~~~~~~~~~~~--~--g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~V   98 (346)
T TIGR03576        29 LTGLAGGFKIDEEDLELLETY--V--GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKV   98 (346)
T ss_pred             cccCCCChhHHHHHHHHHHHh--c--CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEE
Confidence            344667899999988887642  1  22234567777777777      4578999999999999999999999999999


Q ss_pred             EEc---CCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          128 LLP---RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       128 i~~---~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +++   .|+|..+...++..|+++..+         .++++++.  .+++++|++ ++++++|.+++.+++++|+++|++
T Consensus        99 li~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~  166 (346)
T TIGR03576        99 VHYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKS  166 (346)
T ss_pred             EECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHH
Confidence            964   579999999999999876322         24555443  245676666 557899999999999999999999


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccC
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILG  283 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  283 (415)
                      +|+++++||+|+.+.....+..+...+..   .+++.||||+  ++|+|+||+++++        ++++.++.... +..
T Consensus       167 ~~~~livDEAy~~~~~~~~~~~~~~~~~~---divv~s~SKa--laG~r~G~v~~~~--------~li~~l~~~~~~~~~  233 (346)
T TIGR03576       167 KEAIVLVDDASGARVRRLYGQPPALDLGA---DLVVTSTDKL--MDGPRGGLLAGRK--------ELVDKIKSVGEQFGL  233 (346)
T ss_pred             cCCEEEEECCccccccccCCCCCHHHcCC---cEEEeccchh--ccccceEEEEeCH--------HHHHHHHHhhcCccc
Confidence            99999999999986533111122222222   2667799994  7899999999865        68888877643 233


Q ss_pred             CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHH
Q 014936          284 DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL  363 (415)
Q Consensus       284 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l  363 (415)
                      +.+++.+.++.++|+...   .+..++.++++++.+.+.++.+   . + .|..++|+|++++.      .++.+++..+
T Consensus       234 s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~~---~-~-~~~~~~f~~~~~~~------~~~~~~~~~l  299 (346)
T TIGR03576       234 EAQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDKL---N-V-ERTPTGFVIKGVEE------EKLIEIGLDL  299 (346)
T ss_pred             CccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhC---C-C-CcCCCeEEEEeCCC------CCHHHHHHHH
Confidence            467788999999987532   3566788888888888888743   3 3 33445589998863      1356788899


Q ss_pred             HhhcCeEEEcCCCCC-CCCeEEEEeeCChh---hHHHHHHHHHHHH
Q 014936          364 AKEESVIILPGTAVG-LKNWLRVTFAVDPY---SLEECLDRIKSFY  405 (415)
Q Consensus       364 l~~~gi~v~~g~~~~-~~~~iRi~~~~~~~---~l~~~l~~l~~~~  405 (415)
                      ++++||.+.|+..|. .++|+||+++.+++   +.+.+++.|++.+
T Consensus       300 l~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       300 LRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             HHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence            999999999998874 47899999988765   7888988887654

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PLN02822 serine palmitoyltransferase

Probab=100.00  E-value=8.5e-34  Score=272.29  Aligned_cols=348  Identities=15%  Similarity=0.120  Sum_probs=255.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CC-----CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      ++++++||++++.   +++..+|.+++++.++++. +.     -..|++..++.+|+++||++++       .++.|+++
T Consensus       107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s  176 (481)
T PLN02822        107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS  176 (481)
T ss_pred             CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            4788999999973   3577799999999999876 21     1246666779999999999984       45788888


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc--CCCc-eEEEecCCC
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNT-VALVIINPG  183 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~-~~v~i~~p~  183 (415)
                      +|++ ++..++.+++++||.|+++...|.++...+...|.+++.++++..+++..+++++++..  .+++ ++|++..++
T Consensus       177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~  255 (481)
T PLN02822        177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY  255 (481)
T ss_pred             CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence            8776 67889999999999999999988888888888899999988753322222333333221  1234 577777778


Q ss_pred             CccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc--cccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV--PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       184 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      |++|.+.+   +++|+++|++||+++|+||+|+.+.++..+..  ....+...+..++++||||+|+++|   ||+++++
T Consensus       256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~  329 (481)
T PLN02822        256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSA  329 (481)
T ss_pred             CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCH
Confidence            99999977   78899999999999999999998777633322  2222222244588999999999888   9999865


Q ss_pred             CCCCCChHHHHHHHHhhc-cccC--CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936          262 PCGMFRKPKVVERMKKYF-DILG--DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS  338 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  338 (415)
                              ++++.++... ..++  ..++..+.++.++|+..  +...+..++++++++++.+.|++++++. +..+.++
T Consensus       330 --------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~~s  398 (481)
T PLN02822        330 --------RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGLS-IGSNTLS  398 (481)
T ss_pred             --------HHHHHHHhcCCceeeccccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCC
Confidence                    6777766442 2222  33467777777777542  1235678899999999999999877887 4467788


Q ss_pred             eEEEEecCccccCCCC-C---HHHHHHHHHhhcCeEEEcCCC--CCC---CCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          339 MAVMLKLNLSLLDDII-D---DIDFCFKLAKEESVIILPGTA--VGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       339 ~~~~~~l~~~~~~~~~-~---~~~~~~~ll~~~gi~v~~g~~--~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      +++++.++... .... +   ..+++.++++++||.+.|+..  |..   +.++|++++  +++++|++++++|++++.+
T Consensus       399 pi~~l~l~~~~-~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~  477 (481)
T PLN02822        399 PIVFLHLEKST-GSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS  477 (481)
T ss_pred             CEEEEEeCCCc-ccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence            89988886320 0000 1   356888888788999998743  321   357999884  7999999999999999887


Q ss_pred             HH
Q 014936          408 HA  409 (415)
Q Consensus       408 ~~  409 (415)
                      ..
T Consensus       478 ~~  479 (481)
T PLN02822        478 VL  479 (481)
T ss_pred             Hh
Confidence            54

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.3e-33  Score=242.50  Aligned_cols=348  Identities=26%  Similarity=0.442  Sum_probs=273.4

Q ss_pred             HHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcC
Q 014936           55 HVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPR  131 (415)
Q Consensus        55 ~~~~~a~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~  131 (415)
                      ..+++.....+..  +....|....|.+-+|+.+|+|..++.|++.+|++|++|.|++.++..++..++ ++.+.|+++-
T Consensus        89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPi  168 (475)
T KOG0258|consen   89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPI  168 (475)
T ss_pred             HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeec
Confidence            3344444444443  356789999999999999999999999988999999999999999999998886 5678999999


Q ss_pred             CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----CceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936          132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (415)
Q Consensus       132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  206 (415)
                      |.|+.|...+..+|...+.+-++.+++|.+|.++|++.+++     +++++++.||.||||++++.+-+++|+.+|.+++
T Consensus       169 PQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~  248 (475)
T KOG0258|consen  169 PQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEG  248 (475)
T ss_pred             CCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcC
Confidence            99999999999999998888888899999999999887654     5678899999999999999999999999999999


Q ss_pred             cEEEEccccCCcccCCC-Cccccc----ccC----CCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHH
Q 014936          207 TLVIADEVYGHLVFGDK-PFVPMG----VFG----STVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMK  276 (415)
Q Consensus       207 ~~li~De~~~~~~~~~~-~~~~~~----~~~----~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~  276 (415)
                      ++++.||+|...+|... .+.++.    .++    ....++.++|.||.+.. .|.|-||+-.-+.     +|+..+.+.
T Consensus       249 l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~-----~prv~~qi~  323 (475)
T KOG0258|consen  249 LVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNR-----DPRVKQQIK  323 (475)
T ss_pred             eEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccC-----ChhHHHHHH
Confidence            99999999999998854 444321    122    12236888999999754 7999999976542     345666666


Q ss_pred             hhccccCCchhHHHHHHHHhhCCCc------H---HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936          277 KYFDILGDPATFIQAAVPSILQQPD------E---VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL  347 (415)
Q Consensus       277 ~~~~~~~~~~~~~~~a~~~~l~~~~------~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~  347 (415)
                      +......+++...|...........      +   ...+.....++++++.+.+.++.++|+.|- .+++++|++.++..
T Consensus       324 Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~i~l  402 (475)
T KOG0258|consen  324 KLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQISL  402 (475)
T ss_pred             HHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeecccccC
Confidence            6544445666667766665554322      1   234456678889999999999999999954 89999999876643


Q ss_pred             cc-------cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC-C--eEEEEeeCChhhHHHHHHHHHHHHHHHHHH
Q 014936          348 SL-------LDDIIDDIDFCFKLAKEESVIILPGTAVGLK-N--WLRVTFAVDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       348 ~~-------~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~--~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                      +.       ..++..+.-++.+||+..||+++||+.||.. +  ++|.++-...  + +.+++++++-+++..+
T Consensus       403 P~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f~~~  473 (475)
T KOG0258|consen  403 PPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEFMDE  473 (475)
T ss_pred             CHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHHHHh
Confidence            21       1244567788999999999999999999973 3  6888883322  4 7888888887777654

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=100.00  E-value=8.2e-32  Score=255.77  Aligned_cols=331  Identities=14%  Similarity=0.134  Sum_probs=237.1

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---Cc----HHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---GL----PLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~---g~----~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      ++.+++||+.|++   ++++.+|++++++.+.+.... ..|++..   |.    .++|+.+|++++        .+++++
T Consensus        36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii  103 (393)
T TIGR01822        36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL  103 (393)
T ss_pred             CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence            5788999999983   457889999999999887522 2455444   65    889999999983        357888


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEe
Q 014936          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVI  179 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i  179 (415)
                      ++|+++++..++.+++++||.|++++|+|+++...++..+.+...++       .+|++++++.+++      ++++|++
T Consensus       104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~  176 (393)
T TIGR01822       104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT  176 (393)
T ss_pred             ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence            89999999999999999999999999999999988888777765443       2688998887764      6778888


Q ss_pred             cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEE
Q 014936          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFV  258 (415)
Q Consensus       180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~  258 (415)
                      .+++||||.+.   ++++|+++|++||+++|+||+|+...++..+.......+. .+..++++|+||++  +|+|+||++
T Consensus       177 ~~v~~~tG~~~---~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~  251 (393)
T TIGR01822       177 DGVFSMDGVIA---PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTT  251 (393)
T ss_pred             eCCccCCCCcC---CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEE
Confidence            88899999995   4788899999999999999999754433221111111111 13458899999984  478999998


Q ss_pred             eeCCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          259 TTDPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +++        ++.+.++...   ....+.++..+.++.++++..  +..++.+++++++++++.+.|++. ++. +..+
T Consensus       252 ~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~  319 (393)
T TIGR01822       252 ARK--------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFD-IKPA  319 (393)
T ss_pred             eCH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CCCC
Confidence            864        5777665532   122333455555555665432  234567789999999999999886 776 3233


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----CCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----LKNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      . +.++.+.++..     .+..++...+++ +||.+. +..|.    ...++|++++  ++++++++++++|.++.++
T Consensus       320 ~-~~~~~i~~~~~-----~~~~~l~~~L~~-~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~  389 (393)
T TIGR01822       320 D-HPIIPVMLYDA-----VLAQRFARRLLE-EGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRE  389 (393)
T ss_pred             C-CCEEEEEeCCH-----HHHHHHHHHHHH-CCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence            3 34554444321     135667777655 599987 44332    1246999884  6899999999999988764

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=100.00  E-value=1.2e-31  Score=254.95  Aligned_cols=333  Identities=15%  Similarity=0.170  Sum_probs=242.0

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCC------CCCcHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAP------TAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV  105 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~y~~------~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i  105 (415)
                      ++.+.|+.+..     .+.++.+.+++.+.+......  ....      ...+.++|+.+|+++      ++ ++++|++
T Consensus        18 ~~~~yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~   86 (401)
T PRK10874         18 DAGVYLDSAAT-----ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVW   86 (401)
T ss_pred             CceEEEeCCcc-----cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEE
Confidence            45688888863     345688999998887632110  0000      122567888888887      45 6889999


Q ss_pred             eCChHHHHHHHHHHhc----CCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          106 TSGCTQAIDVAMALLS----RPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~----~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      ++|++++++.++.++.    ++||+|++++++|++    +...++..|++++.++.+.  ++.+|++++++.++++++++
T Consensus        87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv  164 (401)
T PRK10874         87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRIL  164 (401)
T ss_pred             ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEE
Confidence            9999999999999983    789999999999975    4456678899999998743  45689999999999999999


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      ++++|+||||.+++   +++|+++|+++|+++++|++|+...+.    ..+..++.   .+++.|++|.|+.+|  +|++
T Consensus       165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~----~~~~~~~~---d~~~~s~~K~~gp~G--~G~l  232 (401)
T PRK10874        165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP----ADVQALDI---DFYAFSGHKLYGPTG--IGVL  232 (401)
T ss_pred             EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc----CCchhcCC---CEEEEecccccCCCc--cEEE
Confidence            99999999999975   678888888999999999999753321    22333332   377889999988777  6998


Q ss_pred             EeeCCCCCCChHHHHHHHHhhc----------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936          258 VTTDPCGMFRKPKVVERMKKYF----------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS  315 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  315 (415)
                      ++++        ++++.+....                      ...++++...+.++..+++...+...++..++.++.
T Consensus       233 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l  304 (401)
T PRK10874        233 YGKS--------ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSL  304 (401)
T ss_pred             EEch--------HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            8765        3444432111                      112355656666666666543333455667888888


Q ss_pred             HHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEEe
Q 014936          316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVTF  387 (415)
Q Consensus       316 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~  387 (415)
                      ++++.+.|+++|++..+ .+..+.++++.++.      .+..++.. .|.++||.+.+|..|.        ..++||+|+
T Consensus       305 ~~~l~~~l~~~~g~~~~-~~~~~~i~~~~~~~------~~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~  376 (401)
T PRK10874        305 ATLAEDALAKLPGFRSF-RCQDSSLLAFDFAG------VHHSDLVT-LLAEYGIALRAGQHCAQPLLAALGVTGTLRASF  376 (401)
T ss_pred             HHHHHHHHhcCCCEEEe-CCCCCcEEEEEECC------cCHHHHHH-HHHHCCcEEeccccchHHHHHHhCCCCEEEEEe
Confidence            99999999998888743 34445556655642      13455554 4567899999988663        368999999


Q ss_pred             e--CChhhHHHHHHHHHHHHHHH
Q 014936          388 A--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       388 ~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +  ++++|++.+++.|+++++.+
T Consensus       377 ~~~nt~edid~ll~al~~~~~~~  399 (401)
T PRK10874        377 APYNTQSDVDALVNAVDRALELL  399 (401)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHh
Confidence            5  68999999999999887653

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=100.00  E-value=1.9e-31  Score=253.42  Aligned_cols=333  Identities=15%  Similarity=0.169  Sum_probs=240.3

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCC-------CCcHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GYAPT-------AGLPLTRRAIAEYLSRDLPYKL-TPNDVFV  105 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~y~~~-------~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i  105 (415)
                      ++.+.|+.+..     .++++.+.+++.+.+...... .+...       ..+.++|+.+++++      +. ++++|++
T Consensus        15 ~~~iyld~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~   83 (398)
T TIGR03392        15 DGTVYLDSAAT-----ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL------NAPDAENIVW   83 (398)
T ss_pred             CCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEE
Confidence            45788888863     345688999998887532111 11111       22456889999988      34 4689999


Q ss_pred             eCChHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       106 ~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      |+|++++++.++.++    .++||+|++++|+|++    +...++..|++++.++.+.  ++.+|++.++++++++++++
T Consensus        84 t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv  161 (398)
T TIGR03392        84 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRIL  161 (398)
T ss_pred             eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEE
Confidence            999999999999987    4789999999999976    3455678899999998753  35689999999999899999


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      ++++|+||||.+++   +++|+++|+++|+++++|++|+.+.+    ...+...+.   .+++.|++|.++.+|  +||+
T Consensus       162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l  229 (398)
T TIGR03392       162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALDI---DFYAFSGHKLYGPTG--IGVL  229 (398)
T ss_pred             EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcCC---CEEEEecccccCCCc--eEEE
Confidence            99999999999965   67788888999999999999976332    122333332   277788899887666  8999


Q ss_pred             EeeCCCCCCChHHHHHHHHhhc----------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936          258 VTTDPCGMFRKPKVVERMKKYF----------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS  315 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  315 (415)
                      +.++        ++++.+....                      .-.++++.....++.++++...+..+++..++.++.
T Consensus       230 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l  301 (398)
T TIGR03392       230 YGKT--------ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSL  301 (398)
T ss_pred             EEcH--------HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            8865        3444332110                      012345555555665555432233456677888889


Q ss_pred             HHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEEe
Q 014936          316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVTF  387 (415)
Q Consensus       316 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~  387 (415)
                      ++++.+.|++++++..+ .+..+.++++.++.      .+..++...| .++||.+.+|..|.        .+++||+|+
T Consensus       302 ~~~l~~~l~~l~g~~~~-~~~~~~i~~~~~~~------~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~  373 (398)
T TIGR03392       302 ADLAEERLAQLPGFRSF-RCPGSSLLAFDFAG------VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASF  373 (398)
T ss_pred             HHHHHHHHhcCCCeEEe-CCCCCcEEEEEeCC------cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEe
Confidence            99999999988887733 33334456555542      1355666554 67899999998763        357999999


Q ss_pred             e--CChhhHHHHHHHHHHHHHHH
Q 014936          388 A--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       388 ~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +  ++++|++.+++.|+++++++
T Consensus       374 ~~~~t~~ei~~l~~~l~~~~~~~  396 (398)
T TIGR03392       374 APYNTQQDVDALVDAVGAALELL  396 (398)
T ss_pred             eccCCHHHHHHHHHHHHHHHHHh
Confidence            5  68999999999999887753

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=1.3e-31  Score=251.79  Aligned_cols=328  Identities=13%  Similarity=0.127  Sum_probs=235.2

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCC----CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGY----APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      .+++.++||+.|+|   .+++.++.+++++.+.+.....  ..|    +......++++.++++++       .++.+++
T Consensus        13 ~~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~   82 (360)
T TIGR00858        13 RDGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLF   82 (360)
T ss_pred             ECCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEE
Confidence            45889999999964   2355678999999998764111  112    222234567777777763       3567777


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecC
Q 014936          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIIN  181 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~  181 (415)
                      ++|+ +++..++.+++++||+|+++.|+|..+...++..|.++..++.       +|++.+++.+++    +++++++.+
T Consensus        83 ~~G~-~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~  154 (360)
T TIGR00858        83 SSGY-LANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDG  154 (360)
T ss_pred             CchH-HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeC
Confidence            7775 4455577888899999999999999999999999998887653       578888887754    467778888


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc--ccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      ++||||..   .++++|.++|+++|+++|+||+|+.+.++....  .....+..++++++++|+||+|+++|   ||+++
T Consensus       155 ~~~~~G~~---~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~  228 (360)
T TIGR00858       155 VFSMDGDI---APLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAG  228 (360)
T ss_pred             CccCCCCC---cCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEc
Confidence            89999988   457888889999999999999998765543221  22222334467899999999998877   99987


Q ss_pred             eCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC
Q 014936          260 TDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE  336 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  336 (415)
                      ++        ++.+.+.....   .+...++..+.++.++++..  ...++.+++++++++++.+.|+++ ++. + .+.
T Consensus       229 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~  295 (360)
T TIGR00858       229 SQ--------ALIDYLINRARTLIFSTALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFT-L-MPS  295 (360)
T ss_pred             CH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCc-c-CCC
Confidence            54        56666654321   12334555555666666432  223567889999999999999987 666 4 456


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIK  402 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~  402 (415)
                      .++++|+.++..     .+..++...+ .++||.+.++..++.   .+++|++++  .++++++.++++|+
T Consensus       296 ~~~~~~~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       296 CTPIVPVIIGDN-----ASALALAEEL-QQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             CCCEEEEEeCCH-----HHHHHHHHHH-HHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence            678899887531     1345666666 567999998765532   358999996  58999999998863

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=100.00  E-value=2.9e-31  Score=252.70  Aligned_cols=337  Identities=15%  Similarity=0.101  Sum_probs=238.6

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++++||+.|++   +++++++.+.+++.+.+.....  ..|....|..++++.+++++.+.+|   .+++|++|+| +
T Consensus        40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g---~~~~i~~tsG-~  112 (397)
T PRK06939         40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG---TEDAILYSSC-F  112 (397)
T ss_pred             CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC---CCcEEEEcCh-H
Confidence            5778999999873   3477889999999998865322  1223346888889888888888777   2367778777 7


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCC
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN  184 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n  184 (415)
                      +++..++.+++++||.|++++|+|+.+...++..|.++..++.       .|++++++.+++      ++++++..+.+|
T Consensus       113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~  185 (397)
T PRK06939        113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS  185 (397)
T ss_pred             HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence            7888999999999999999999999999999989988877653       477888777653      566666666789


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC--CCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  262 (415)
                      ++|..   +++++|+++|+++|+++|+||+|+...+.  +........+. .+.+++++|+||++  +|+|+||+++++ 
T Consensus       186 ~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~--~g~r~G~v~~~~-  258 (397)
T PRK06939        186 MDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKAL--GGASGGYTAGRK-  258 (397)
T ss_pred             CCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHh--CccCceEEEeCH-
Confidence            99986   67899999999999999999999643322  21111111221 12458999999996  356899999865 


Q ss_pred             CCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          263 CGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                             ++++.+.....   ...+.++..+.++.++++..  ...++.+++++++++.+.+.|+.+ ++. ...+.++ 
T Consensus       259 -------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~-  326 (397)
T PRK06939        259 -------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELL--EESDELRDRLWENARYFREGMTAA-GFT-LGPGEHP-  326 (397)
T ss_pred             -------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCCCC-
Confidence                   57777765321   12233444455555555321  113467788999999999999987 666 3244444 


Q ss_pred             EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ++++.++..     .+..++...++++ ||.+.++.++..   .+++|++++  .+++++++++++|++++++.
T Consensus       327 ~~~~~~~~~-----~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        327 IIPVMLGDA-----KLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL  394 (397)
T ss_pred             EEEEEECCH-----HHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            444334321     1356777777655 999986543221   368999984  68999999999999888653

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=100.00  E-value=4.8e-31  Score=251.23  Aligned_cols=332  Identities=16%  Similarity=0.152  Sum_probs=231.6

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      +++.++|++++   +.+++++|.+++++.+.+.....      ..|+......+|++.+|+++      + .++.+++++
T Consensus        45 ~~~~~~~~sn~---yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~------g-~~~~i~~~s  114 (410)
T PRK13392         45 PRRVTIWCSND---YLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH------G-KESALLFTS  114 (410)
T ss_pred             CceEEEEECCC---ccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh------C-CCCEEEECc
Confidence            35688999887   45678899999999998764211      12333334678999999988      3 245555555


Q ss_pred             ChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc----CCCceEEEecC
Q 014936          108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA----DQNTVALVIIN  181 (415)
Q Consensus       108 g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~v~i~~  181 (415)
                      | ++++..++..+..  +|+.|+++.+.|..+...++..|.++..++.+       |.+.+++.+    .+++++|++++
T Consensus       115 G-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~~t~~v~i~~  186 (410)
T PRK13392        115 G-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVDPDRPKLIAFES  186 (410)
T ss_pred             H-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhccCCCCEEEEEeC
Confidence            5 6777778876653  78999888888888888888889888776531       334444333    34788999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC-eEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      |+||||.+++   +++|.++|+++|+++|+||+|+.+.++..+.......+..++ .++++|+||+|+++|   ||++++
T Consensus       187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~  260 (410)
T PRK13392        187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS  260 (410)
T ss_pred             CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC
Confidence            9999999976   778888888999999999999965543222111111111122 378899999999888   999875


Q ss_pred             CCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +        ++++.++....   .+...+++.+.++.++|+..  ......+++++++++++.+.|+++ ++. + .+..
T Consensus       261 ~--------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~  327 (410)
T PRK13392        261 A--------DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL--KTSQTERDAHQDRVAALKAKLNAN-GIP-V-MPSP  327 (410)
T ss_pred             H--------HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-C-CCCC
Confidence            4        57776665432   23345667788777777642  223345577889999999999987 777 4 3444


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      +.++.+.++..     .+..++...|++++||.+.++..+..   ..++|+++  ..++++++.+++.|.++.++
T Consensus       328 ~~~~~i~~~~~-----~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~  397 (410)
T PRK13392        328 SHIVPVMVGDP-----TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDR  397 (410)
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence            55554444321     12456777776678999998765433   36899999  47899999999999988764

>PLN02483 serine palmitoyltransferase

Probab=100.00  E-value=9.7e-31  Score=251.72  Aligned_cols=337  Identities=12%  Similarity=0.100  Sum_probs=233.8

Q ss_pred             cCcceeEecccCCCCCCCCC-Cc----HHHHHHHHHHHhc--CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TT----HVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~----~~~~~a~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      ...+.+||++.+   +.++. ++    +.+.+++.+.-..  +....|+...++.++++.+|++++       .++.+++
T Consensus        98 ~~~~~~n~~s~~---YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~  167 (489)
T PLN02483         98 KTRRCLNLGSYN---YLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVF  167 (489)
T ss_pred             CCceEEEeecCC---ccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEE
Confidence            467789999998   54554 23    4555555554322  122347777889999999999984       3566666


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-------CC-----
Q 014936          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QN-----  173 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~-----  173 (415)
                      ++| +.++..++.+++++||.|++++|+|.++...++..|++++.++++       |++++++.++       ++     
T Consensus       168 ~~G-~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~  239 (489)
T PLN02483        168 GMG-YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW  239 (489)
T ss_pred             CCH-HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCC
Confidence            665 556667888899999999999999999999999999999998863       3455544332       22     


Q ss_pred             ceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC--CCCcccccccCCCCCeEEEccCccccCCC
Q 014936          174 TVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--DKPFVPMGVFGSTVPILTLGSLSKRWIVP  250 (415)
Q Consensus       174 ~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  250 (415)
                      ++.++++++ .|++|.+   .++++|+++|+++|+++|+||+|+....+  |.+..+....+..+..|+++||||+|++.
T Consensus       240 ~k~livve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~  316 (489)
T PLN02483        240 KKIIVIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC  316 (489)
T ss_pred             ceEEEEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC
Confidence            255666665 5899998   56889999999999999999999865443  22222333333345679999999999888


Q ss_pred             CceEEEEEeeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhC----CCcHHHHHHHHHHHHHHHHHHHHHh
Q 014936          251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQ----QPDEVFFKKTLNLLKQSVDICYNKI  323 (415)
Q Consensus       251 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~~~~~l~~~l  323 (415)
                      |   ||+++++        ++++.++....   .....++....++.+.|+    ....+...+++++++++++++.+.|
T Consensus       317 G---G~i~~~~--------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L  385 (489)
T PLN02483        317 G---GYIAGSK--------ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSEL  385 (489)
T ss_pred             c---eEEEcCH--------HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHH
Confidence            7   9998764        68888876522   122223333333444442    1112344566789999999999999


Q ss_pred             hcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHH
Q 014936          324 KEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECL  398 (415)
Q Consensus       324 ~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l  398 (415)
                      +++ ++. +..+.++..+|+.+...     .+..++...+++ +||.+.|..++..   .+.+|++++  ++++++++++
T Consensus       386 ~~~-G~~-v~~~~~sp~~~l~l~~~-----~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l  457 (489)
T PLN02483        386 QKM-GFE-VLGDNDSPVMPIMLYNP-----AKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSREDLIKAL  457 (489)
T ss_pred             HHC-CCc-ccCCCCCCEEEEEECCH-----HHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHH
Confidence            998 776 43455566666655321     124467777764 6999997433222   368999994  6899999999


Q ss_pred             HHHHHHHHHHH
Q 014936          399 DRIKSFYQRHA  409 (415)
Q Consensus       399 ~~l~~~~~~~~  409 (415)
                      ++|+++.+.+.
T Consensus       458 ~~L~~~~~~~~  468 (489)
T PLN02483        458 EVISEVGDLVG  468 (489)
T ss_pred             HHHHHHHHHhC
Confidence            99999887654

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=100.00  E-value=2e-30  Score=245.75  Aligned_cols=335  Identities=16%  Similarity=0.148  Sum_probs=240.3

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      ++++++||+.+++   +++++++.+++++.+++...  ....|....|..++++.+++++.+..|   .++.+++++| +
T Consensus        31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g---~~~~i~~~sG-~  103 (385)
T TIGR01825        31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK---TEAALVFQSG-F  103 (385)
T ss_pred             CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcH-H
Confidence            4789999999863   34778899999999987642  234577778999999999999988777   3456777777 5


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecCCCCcc
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPC  186 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~npt  186 (415)
                      +++..++.+++++||.|+++.|+|..+...+...|.++..++       .+|++++++.+++    +++++++.+++|||
T Consensus       104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~t  176 (385)
T TIGR01825       104 NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMD  176 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCC
Confidence            667788888999999999999999998888788888776553       2677888776543    57778888889999


Q ss_pred             ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc--cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936          187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM--GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (415)
Q Consensus       187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  264 (415)
                      |.+.+   +++|.++|++||+++|+||+|+.+.++.......  .... .+.++++.||||+|+++|   ||+++++   
T Consensus       177 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~---  246 (385)
T TIGR01825       177 GDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK---  246 (385)
T ss_pred             CCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH---
Confidence            99855   7888999999999999999998766542211111  1222 346799999999987766   9988754   


Q ss_pred             CCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEE
Q 014936          265 MFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV  341 (415)
Q Consensus       265 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  341 (415)
                           ++++.+.....   .+...++..+.++.++++... + ..+..++++++++++.+.|+++ ++. +..|.+. ++
T Consensus       247 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~-~~  316 (385)
T TIGR01825       247 -----ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQ-R-SPELMERLWDNTRFFKAGLGKL-GYD-TGGSETP-IT  316 (385)
T ss_pred             -----HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCCCC-EE
Confidence                 57777654421   122345666777777765321 1 1245677788899999999887 777 4345444 45


Q ss_pred             EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++.++..     .+..++...++++ ||.+.++..+..   ..++|+++  ..+++++++++++|++++++
T Consensus       317 ~~~~~~~-----~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~  381 (385)
T TIGR01825       317 PVVIGDE-----KAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE  381 (385)
T ss_pred             EEEECCH-----HHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence            4444321     1345677777665 999854333221   36899987  47999999999999998864

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=100.00  E-value=3.6e-30  Score=245.24  Aligned_cols=334  Identities=16%  Similarity=0.210  Sum_probs=239.4

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC----CC----CCCCcHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG----YA----PTAGLPLTRRAIAEYLSRDLPYKLT-PNDVF  104 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----y~----~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~  104 (415)
                      +++++.|+.+..     .++++.+.+++.+.+.......    +.    ......++|+.+++++      +.+ +++|+
T Consensus        16 ~~~~~yld~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------~~~~~~~v~   84 (403)
T TIGR01979        16 GKPLVYLDSAAT-----SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI------NAASDEEIV   84 (403)
T ss_pred             CCceEEEeCccc-----cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CcCCCCeEE
Confidence            567899999973     2456889999988765321110    10    0124568889999988      345 67999


Q ss_pred             EeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcch----HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936          105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (415)
Q Consensus       105 i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (415)
                      +++|+++++.+++.++    .++||+|+++++.|++.    ...++..|+++..++.+  .++.++++.+++.+++++++
T Consensus        85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l  162 (403)
T TIGR01979        85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL  162 (403)
T ss_pred             EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence            9999999999998875    47899999999988763    34556789999999875  33568999999999989999


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      +++++|+||||..+|   +++|+++|+++|+++++|++|+.+.    ....+..++.   .+++.|++|.++.+|  +|+
T Consensus       163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~~~~~---d~~~~s~~K~~gp~G--~g~  230 (403)
T TIGR01979       163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQALDC---DFYVFSGHKMYGPTG--IGV  230 (403)
T ss_pred             EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCccccCC---CEEEEecccccCCCC--ceE
Confidence            999999999999977   6778888889999999999997632    2222333332   388889999887666  899


Q ss_pred             EEeeCCCCCCChHHHHHHHHhh----------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936          257 FVTTDPCGMFRKPKVVERMKKY----------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ  314 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  314 (415)
                      +++++        ++.+.+...                      ....++++.....++..+++...+...++..++..+
T Consensus       231 l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~  302 (403)
T TIGR01979       231 LYGKE--------ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE  302 (403)
T ss_pred             EEEch--------HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            98864        333333211                      001134555566666666643222335677888899


Q ss_pred             HHHHHHHHhhcCCCCcCCCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC--------CCCCCe
Q 014936          315 SVDICYNKIKEIPCISCPHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA--------VGLKNW  382 (415)
Q Consensus       315 ~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--------~~~~~~  382 (415)
                      .++.+.+.|+.+++++++ .|.    .+.++.+.++.      .+..++. ..|+++||.+.+|..        ++.+++
T Consensus       303 l~~~l~~~l~~~~g~~~~-~~~~~~~~~~~v~~~~~~------~~~~~~~-~~L~~~gI~v~~g~~~~~~~~~~~~~~~~  374 (403)
T TIGR01979       303 LTAYALERLGEIPGLRIY-GPRDAEDRGGIISFNVEG------VHPHDVG-TILDEEGIAVRSGHHCAQPLMRRFGVPAT  374 (403)
T ss_pred             HHHHHHHHHhcCCCEEEe-CCCCccccCceEEEEeCC------cCHHHHH-HHHhhCCEEEcchhhhhHHHHHHhCCCCE
Confidence            999999999988888743 443    14455555642      1344554 455788999998763        334679


Q ss_pred             EEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          383 LRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       383 iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +|||++  ++++|++.+++.|+++++.+
T Consensus       375 iRiS~~~~~t~~di~~l~~~l~~~~~~~  402 (403)
T TIGR01979       375 CRASFYIYNTEEDIDALVEALKKVRKFF  402 (403)
T ss_pred             EEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence            999996  58899999999998877643

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.4e-31  Score=221.07  Aligned_cols=287  Identities=19%  Similarity=0.298  Sum_probs=233.3

Q ss_pred             CCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--C
Q 014936           97 KLTPNDVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--N  173 (415)
Q Consensus        97 ~~~~~~i~i~~g~~~al~~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~  173 (415)
                      +.++|+|.+..|+.+.+.+++++.+.|| ++|+.-.|+|+-|.-.+...+++++.+|.++  +|.+|++.+.+.++.  .
T Consensus        83 pLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~  160 (375)
T KOG0633|consen   83 PLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSK  160 (375)
T ss_pred             CCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhcccc
Confidence            6889999999999999999999999999 8999999999999999999999999999876  577999999887754  5


Q ss_pred             ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      .|.+++++|+||||..+..+++++|.+.-.  |.++++||+|.+|...+.   .+.-....++++++.++||.||++|+|
T Consensus       161 iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S---~~~lV~kYpNLivlqTlSKsfGLAGiR  235 (375)
T KOG0633|consen  161 IKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVES---RMKLVKKYPNLIVLQTLSKSFGLAGIR  235 (375)
T ss_pred             ceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeeccccc---cchHhHhCCceeehhhhhhhcCcceeE
Confidence            788999999999999999999999998654  889999999999764322   233345567889999999999999999


Q ss_pred             EEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936          254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH  333 (415)
Q Consensus       254 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  333 (415)
                      +|+-..+.        .+++-+..... ....+..+..++.+++.+..-..++..++.+.+.+.++-+.|.++|.+.-+.
T Consensus       236 vG~~~~~~--------~ia~iln~~Ka-PYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~  306 (375)
T KOG0633|consen  236 VGYGAFPL--------SIAEILNRAKA-PYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYP  306 (375)
T ss_pred             eecccccH--------HHHHHHHhccC-CccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCC
Confidence            99998865        57777766655 4566777888888888865557889999999999999999999988776444


Q ss_pred             CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE-cCCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936          334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL-PGTAVGLKNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                      .+..++|+.+++....  +. -+..+..+++.+.||.|+ -|+-.+..+++||+.++++|. .-+++.|++
T Consensus       307 gg~daNFiLi~v~~~~--n~-~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~  373 (375)
T KOG0633|consen  307 GGSDANFILIEVTGGD--NG-MAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQ  373 (375)
T ss_pred             CcccccEEEEEEcCCC--cH-HHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHh
Confidence            6677889999886421  11 255667777788999986 466666789999999876654 444555544

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=100.00  E-value=3.4e-30  Score=245.21  Aligned_cols=332  Identities=14%  Similarity=0.164  Sum_probs=239.5

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-C-------CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-P-------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~-~-------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      .+++.|+.+..     .++++.+++++.+.+.....+... .       .....++|+.+|++++.     .++++|++|
T Consensus        22 ~~~iYld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t   91 (406)
T PRK09295         22 LPLAYLDSAAS-----AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV   91 (406)
T ss_pred             CceEEEeCccc-----ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence            46788888863     356788999998887632211111 1       12256888888888731     257899999


Q ss_pred             CChHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEE
Q 014936          107 SGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (415)
Q Consensus       107 ~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  178 (415)
                      +|++++++.++.++    .++||+|+++.+.|++    +...++..|+++..++.++  ++.+|++++++++++++++++
T Consensus        92 ~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~  169 (406)
T PRK09295         92 RGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLA  169 (406)
T ss_pred             CCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEE
Confidence            99999999998874    5789999999998875    3455677899999998753  345899999999988999999


Q ss_pred             ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE
Q 014936          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (415)
Q Consensus       179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  258 (415)
                      +++|+||||.++|   +++|+++|+++|+++++|++|+.+.    ....+..++.+   +++.|++|.++.+|  +||++
T Consensus       170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~~~D---~~~~s~~K~~gp~G--~G~l~  237 (406)
T PRK09295        170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQALDCD---FYVFSGHKLYGPTG--IGILY  237 (406)
T ss_pred             EecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchhcCCC---EEEeehhhccCCCC--cEEEE
Confidence            9999999999976   6778888889999999999997633    22333333333   78889999877777  89998


Q ss_pred             eeCCCCCCChHHHHHHHHh-----------------------hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936          259 TTDPCGMFRKPKVVERMKK-----------------------YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS  315 (415)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  315 (415)
                      +++        ++.+.+..                       .....++++.....++.++++...+..++...++.+++
T Consensus       238 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l  309 (406)
T PRK09295        238 VKE--------ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNL  309 (406)
T ss_pred             Ech--------HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            865        23222210                       01113466777777777777654334567777888899


Q ss_pred             HHHHHHHhhcCCCCcCCCCCC-CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEE
Q 014936          316 VDICYNKIKEIPCISCPHKPE-GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVT  386 (415)
Q Consensus       316 ~~~l~~~l~~~~~~~~~~~p~-~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~  386 (415)
                      ++++.+.|++++++.++ .|. .+..+.+.++.      .+..++.. .|.++||.++.|..|.        .++++|+|
T Consensus       310 ~~~l~~~l~~~~~~~~~-~~~~~~~iv~~~~~~------~~~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS  381 (406)
T PRK09295        310 MHYALSQLESVPDLTLY-GPQNRLGVIAFNLGK------HHAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRAS  381 (406)
T ss_pred             HHHHHHHHhcCCCEEEe-CCCCCceEEEEEECC------cCHHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEE
Confidence            99999999988887744 332 22344444542      13455544 4578899999988664        24689999


Q ss_pred             ee--CChhhHHHHHHHHHHHHH
Q 014936          387 FA--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       387 ~~--~~~~~l~~~l~~l~~~~~  406 (415)
                      ++  ++++|++.+++.|+++..
T Consensus       382 ~~~ynt~~did~l~~~l~~i~~  403 (406)
T PRK09295        382 LAMYNTHEEVDRLVAGLQRIHR  403 (406)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHH
Confidence            95  688999999999988643

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=100.00  E-value=3e-30  Score=244.75  Aligned_cols=333  Identities=14%  Similarity=0.121  Sum_probs=229.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      ++++++||+.+++   .++.++|.+++++.+.+....  ...|....|..++++.+++.+.+.++   .+ +.+++++++
T Consensus        37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~-~~i~~~~g~  109 (385)
T PRK05958         37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AE-RALLFSSGY  109 (385)
T ss_pred             CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CC-cEEEECcHH
Confidence            4899999999863   245678999999999886411  11222222333444444444443333   23 445555566


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC---ceEEEecCCCCccc
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGNPCG  187 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG  187 (415)
                      +++..++..+.++||.|+++.|+|+.+...+...|.++..++.       .|++.+++.+++.   +.++++.+++|++|
T Consensus       110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G  182 (385)
T PRK05958        110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG  182 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence            7777787888999999999999999999888888998887754       3788888887652   44555556789999


Q ss_pred             cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC--CCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  265 (415)
                      ..   .++++|+++|+++|+++|+||+|+.+.++  +........+...++++++.|+||.|+++|   ||+++++    
T Consensus       183 ~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~----  252 (385)
T PRK05958        183 DL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSE----  252 (385)
T ss_pred             Cc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCH----
Confidence            88   55888999999999999999999776544  222222123334457899999999998777   8888754    


Q ss_pred             CChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936          266 FRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM  342 (415)
Q Consensus       266 ~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~  342 (415)
                          ++.+.+....   ..+...++....++.++|+... . .++..+++.++++++.+.|+.+ +++ + .+..|.+++
T Consensus       253 ----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~-~-~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~  323 (385)
T PRK05958        253 ----TLIDYLINRARPFIFTTALPPAQAAAARAALRILR-R-EPERRERLAALIARLRAGLRAL-GFQ-L-MDSQSAIQP  323 (385)
T ss_pred             ----HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHc-CCC-c-CCCCCCEEE
Confidence                5666654331   1123355556566666665321 1 1466788999999999999987 666 4 334566778


Q ss_pred             EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      +.++..     .++.++...+ .++||.+.++..+..   ++++||+++  .+++++++++++|+++
T Consensus       324 ~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~  384 (385)
T PRK05958        324 LIVGDN-----ERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA  384 (385)
T ss_pred             EEeCCH-----HHHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence            777531     1355677776 567999988654321   468999996  6899999999999865

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=2.4e-30  Score=245.93  Aligned_cols=341  Identities=16%  Similarity=0.158  Sum_probs=235.9

Q ss_pred             ccCcceeEecccCCCCCCCCCC-cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHT-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++||..|.+...  ++. +|.+.+++.+.+.....   ....+..++++.+++++.+..+    .+++++++|++
T Consensus        36 ~dg~~~iD~~~g~~~~~--lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~  106 (396)
T PRK02627         36 DDGKEYLDFLAGIAVNN--LGHCHPKLVEAIQEQAAKLIH---TSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGA  106 (396)
T ss_pred             CCCCEEEECCccHHhcc--CCCCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhhcC----CCEEEECCCcH
Confidence            35788999998865432  444 68999999998875321   1112235788888888876533    48999999999


Q ss_pred             HHHHHHHHHhcCCC-------CEEEEcCCCCcchHHHHHhCCCeEE-EeeccC-CCCC----CCChhHHHhhcCCCceEE
Q 014936          111 QAIDVAMALLSRPG-------ANILLPRPGFPIYELSAAFRHIEVR-HFDLLP-DKGW----EVDLDDIESLADQNTVAL  177 (415)
Q Consensus       111 ~al~~~~~~l~~~g-------d~vi~~~p~y~~~~~~~~~~g~~~~-~~~~~~-~~~~----~~~~~~l~~~~~~~~~~v  177 (415)
                      +|+..+++.+...+       ++|++..++|+++...+...+.... .....+ ..++    ..|++++++.+.++++++
T Consensus       107 eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v  186 (396)
T PRK02627        107 EANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAV  186 (396)
T ss_pred             HHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEE
Confidence            99999999765332       6799999999987666554432211 000000 0111    128999999998788888


Q ss_pred             EecCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          178 VIINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       178 ~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      ++..++||+| ..++.+.+++|.++|+++|+++|+||+|.++.+.+.. ..+...+..+++   .+|||.++ +|+|+||
T Consensus       187 ii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~rig~  261 (396)
T PRK02627        187 MLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPDI---MTLAKGLG-GGVPIGA  261 (396)
T ss_pred             EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCCE---EEEcchhh-CCcccEE
Confidence            8888899999 6889999999999999999999999999987665532 222223322232   37899987 8999999


Q ss_pred             EEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          257 FVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      +++++        ++++.+... ...+.+.+++.|.++.++|+...+ +..++.++.....++.+.+.+.++|.+. . .
T Consensus       262 ~~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~  331 (396)
T PRK02627        262 VLAKE--------KVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIK-E-V  331 (396)
T ss_pred             EEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCee-e-e
Confidence            99975        577766543 233567889999999988864321 2333333333333444444333343333 2 3


Q ss_pred             CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +..|.++|++++.       +..+++..++++ ||.+.|+.    .+++|+++  ..+++++++++++|+++++++
T Consensus       332 ~~~g~~~~i~~~~-------~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~  395 (396)
T PRK02627        332 RGLGLMIGIELDR-------PAAEIVKKALEK-GLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL  395 (396)
T ss_pred             ccCcEEEEEEecC-------cHHHHHHHHHHC-CeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence            4468889988742       467777777655 99999864    37899987  578999999999999988653

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=100.00  E-value=8.4e-30  Score=243.74  Aligned_cols=336  Identities=15%  Similarity=0.216  Sum_probs=241.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC--C---CCC---CCCcHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--G---YAP---TAGLPLTRRAIAEYLSRDLPYKLT-PNDVF  104 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~---y~~---~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~  104 (415)
                      +.+++.|+.+.+     .++++.+++++.+.+......  .   |..   ...+.++|+.++++++      +. +++|+
T Consensus        30 ~~~~iyLd~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~   98 (424)
T PLN02855         30 GSKLVYLDNAAT-----SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIV   98 (424)
T ss_pred             CCCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEE
Confidence            456889999874     345788999998876532111  1   111   1224688899999883      43 57999


Q ss_pred             EeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936          105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (415)
Q Consensus       105 i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (415)
                      +|+|+|++++.++.++    .++||+|+++.+.|++    +...++..|++++.++.+++  ..+|++.+++.+++++++
T Consensus        99 ~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~l  176 (424)
T PLN02855         99 FTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKL  176 (424)
T ss_pred             EeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceE
Confidence            9999999999998863    5789999999998875    34456778999999987543  348999999999889999


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      +++++|+||||.++|   +++|+++|+++|+++++|++|+..    .....+..++.   .+++.|++|.++.+|  +||
T Consensus       177 v~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g----~~~~~~~~~~~---d~~~~s~~K~~gp~G--~G~  244 (424)
T PLN02855        177 VATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVP----HMPVDVQTLGA---DFLVASSHKMCGPTG--IGF  244 (424)
T ss_pred             EEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcC----CcCCCchhcCC---CEEEeecccccCCCc--cEE
Confidence            999999999999987   567788889999999999999752    22223333333   277999999876666  899


Q ss_pred             EEeeCCCCCCChHHHHHHHHhh----------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936          257 FVTTDPCGMFRKPKVVERMKKY----------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ  314 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  314 (415)
                      +++++        ++++.+...                      ....++++.....++..+++...+..+++..++..+
T Consensus       245 l~~~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~  316 (424)
T PLN02855        245 LWGKS--------DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVE  316 (424)
T ss_pred             EEEch--------hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            99865        233332111                      011234566666666666654333467788888999


Q ss_pred             HHHHHHHHhhcCCCCcCCCCCC------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CC
Q 014936          315 SVDICYNKIKEIPCISCPHKPE------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LK  380 (415)
Q Consensus       315 ~~~~l~~~l~~~~~~~~~~~p~------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~  380 (415)
                      .++++.+.|++++++.++ .|.      .+.++.+.++.      .+..++...|.+++||.+..|..|.        .+
T Consensus       317 l~~~l~~~L~~~~g~~i~-~~~~~~~~~r~~~v~~~~~~------~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~  389 (424)
T PLN02855        317 LGTYLYEKLSSVPGVRIY-GPKPSEGVGRAALCAFNVEG------IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVN  389 (424)
T ss_pred             HHHHHHHHHhcCCCEEEe-CCCcccccCcccEEEEEECC------cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCC
Confidence            999999999988888744 322      23455566642      1355666666444599999887653        35


Q ss_pred             CeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936          381 NWLRVTFA--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       381 ~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      +++|+|++  ++++|++.+++.|+++++.++
T Consensus       390 ~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~  420 (424)
T PLN02855        390 ASARASLYFYNTKEEVDAFIHALKDTIAFFS  420 (424)
T ss_pred             CeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence            78999995  689999999999999988754

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=100.00  E-value=4e-30  Score=241.19  Aligned_cols=347  Identities=16%  Similarity=0.144  Sum_probs=250.8

Q ss_pred             cCcceeEecccCC--CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDP--TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+.++++|..+++  +...+.+. .++.++..+++..++ ..|....|.++||+++++++        ..+++++|+|++
T Consensus         9 ~g~n~~~l~~~~v~iDlltds~t-~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~--------g~~~vv~t~~Gt   78 (431)
T cd00617           9 AGYNVFLLRSEDVYIDLLTDSGT-GAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLF--------GFKHIIPTHQGR   78 (431)
T ss_pred             cCCCEEeCCCCCcCCCCCCCCCc-HHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHH--------CCCeEEEcCCHH
Confidence            4888999999998  43332222 356666666665544 36999899999999999999        346899999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC--------CCCChhHHHhhcCCC----ceEEE
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG--------WEVDLDDIESLADQN----TVALV  178 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~----~~~v~  178 (415)
                      +|+.+++.++++|||.| +++|.|..+.......|++++.+++++..+        +.+|+++|+++++++    +++|+
T Consensus        79 ~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~  157 (431)
T cd00617          79 GAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIV  157 (431)
T ss_pred             HHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEE
Confidence            99999999999999987 689999999999999999999999865432        449999999999865    67889


Q ss_pred             ecCCCCcc-ccCCCHHHHHHHHHHHhhcCcEEEEccccCCc--cc-----CCCCcccccccCCCCCeEEEccCccccCCC
Q 014936          179 IINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHL--VF-----GDKPFVPMGVFGSTVPILTLGSLSKRWIVP  250 (415)
Q Consensus       179 i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  250 (415)
                      +++|+||+ |++++.+++++|.++|++||+++|+|+++...  .+     ++....++...     ++.++|++|.+.++
T Consensus       158 v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei-----~~e~~s~sd~~~mS  232 (431)
T cd00617         158 LTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEI-----AREMFSYADGCTMS  232 (431)
T ss_pred             EECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHH-----HHHhhccCCEEEEE
Confidence            99999998 99999999999999999999999999996532  12     12222222221     23455677776667


Q ss_pred             Cce------EEEEEeeCCCCCCChHHHHHHHHhhcc-----c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936          251 GWR------LGWFVTTDPCGMFRKPKVVERMKKYFD-----I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       251 G~r------~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  318 (415)
                      |+|      .||+++++       ++++++++....     . .++.+.....+++..|++..+  . +..+...+++++
T Consensus       233 ~~K~~~~~~GG~i~~~d-------~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~-~~l~~~~~~r~~  302 (431)
T cd00617         233 AKKDGLVNIGGFLALRD-------DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--E-DYLRHRVEQVRY  302 (431)
T ss_pred             eecCCCCccceEEEeCc-------HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--H-HHHHHHHHHHHH
Confidence            666      56888865       247777764321     1 122233334444446654211  1 222333335688


Q ss_pred             HHHHhhcCCCCcCCCCCCCceEEEEecCcccc--C-CCCCHHHHHHHHHhhcCeEEEc-CCC-CC-----------CCCe
Q 014936          319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL--D-DIIDDIDFCFKLAKEESVIILP-GTA-VG-----------LKNW  382 (415)
Q Consensus       319 l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~-~~~~~~~~~~~ll~~~gi~v~~-g~~-~~-----------~~~~  382 (415)
                      +.+.|++. |+. +..|.+|+++|++.+.-..  + ...++..++.+|+.+.||.+.- |+. ++           .-..
T Consensus       303 l~~~L~~~-G~~-v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~  380 (431)
T cd00617         303 LGDRLDEA-GVP-IVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELEL  380 (431)
T ss_pred             HHHHHHHC-CCC-ccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccce
Confidence            99999988 888 4489999999998764210  0 0115788999999999999643 442 11           0257


Q ss_pred             EEEEe---eCChhhHHHHHHHHHHHHHH
Q 014936          383 LRVTF---AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       383 iRi~~---~~~~~~l~~~l~~l~~~~~~  407 (415)
                      +|+++   ..+.+.++...+.|..++++
T Consensus       381 ~rl~~prr~~t~~~~~~~~~~~~~~~~~  408 (431)
T cd00617         381 VRLAIPRRVYTQDHMDYVAAAVIALYER  408 (431)
T ss_pred             eEEeccccccCHHHHHHHHHHHHHHHhh
Confidence            99999   35889999999999988876

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=100.00  E-value=6.5e-30  Score=242.94  Aligned_cols=333  Identities=16%  Similarity=0.123  Sum_probs=234.9

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++++++|+.++   +.++..+|++++++.++++.....      .|+......+|++.+|++++        .+..++++
T Consensus        44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~  112 (402)
T TIGR01821        44 AKDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFT  112 (402)
T ss_pred             CeeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEEC
Confidence            36789999998   677889999999999988752211      12333345788888888872        24566677


Q ss_pred             ChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---C-CceEEEecC
Q 014936          108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---Q-NTVALVIIN  181 (415)
Q Consensus       108 g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~v~i~~  181 (415)
                      +|++++..++..+..  +|+.|+.+...|......+...|.++..+++       .|++++++.++   + ++++|++++
T Consensus       113 sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~  185 (402)
T TIGR01821       113 SGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFES  185 (402)
T ss_pred             chHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcC
Confidence            779999999988765  6777777777777777777778887766543       25666666554   2 578899999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      |+||+|.+.+   +++|.++|+++|+++|+||+|+.+.++..+.......+. ....++++||||+|+++|   ||++++
T Consensus       186 ~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~  259 (402)
T TIGR01821       186 VYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS  259 (402)
T ss_pred             CCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC
Confidence            9999999966   788888899999999999999965544222111111121 123578899999999888   998875


Q ss_pred             CCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +        ++++.++...   .++.+.++..+.++.++|+...+  .+...++++++++++.+.|+++ ++. +..+ .
T Consensus       260 ~--------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-~  326 (402)
T TIGR01821       260 R--------KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKE--SQDLRRAHQENVKRLKNLLEAL-GIP-VIPN-P  326 (402)
T ss_pred             H--------HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-cCCC-C
Confidence            4        5777776432   12345677778887777764321  1445566778889999999887 776 3233 4


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +.++.+.++..     ....++...+++++||.+.+...+..   ..++||++  .+++++++++++.|+++++++
T Consensus       327 ~~i~~i~~~~~-----~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  397 (402)
T TIGR01821       327 SHIVPVIIGDA-----ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL  397 (402)
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence            55666555421     12456777766677999988654433   36899999  378999999999999988653

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK10534 L-threonine aldolase; Provisional

Probab=100.00  E-value=1.2e-30  Score=242.13  Aligned_cols=316  Identities=17%  Similarity=0.143  Sum_probs=220.2

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHH
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM  117 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~  117 (415)
                      |+|+++..     .+++|.+++++.+...  ....|++..+..+|+++||+++      +  .+.+++++|+++++.+++
T Consensus         2 ~~~~~~~~-----~~p~~~~~~a~~~~~~--~~~~Y~~~~~~~~L~~~la~~~------g--~~~~~v~~~g~~a~~~~l   66 (333)
T PRK10534          2 IDLRSDTV-----TRPSRAMLEAMMAAPV--GDDVYGDDPTVNALQDYAAELS------G--KEAALFLPTGTQANLVAL   66 (333)
T ss_pred             cccccccC-----CCCCHHHHHHHHhccC--CCcccCCCHHHHHHHHHHHHHh------C--CCeEEEeCchHHHHHHHH
Confidence            67888873     3377899999877544  2357865568899999999998      2  345578888888888888


Q ss_pred             HHhcCCCCEEEEcCCCCcc-hHHH-HHhCC-CeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCcccc
Q 014936          118 ALLSRPGANILLPRPGFPI-YELS-AAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGN  188 (415)
Q Consensus       118 ~~l~~~gd~vi~~~p~y~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~  188 (415)
                      .+++++||+|+++.|+|.. +... +...+ ++++.++++  .++.+|+++|++++++      ++++|+++||+  +|.
T Consensus        67 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~  142 (333)
T PRK10534         67 LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK  142 (333)
T ss_pred             HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence            8889999999999888853 3221 23333 566666653  4577899999998865      57899999776  499


Q ss_pred             CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE-EEEeeCCCCCCC
Q 014936          189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG-WFVTTDPCGMFR  267 (415)
Q Consensus       189 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~~~~~~~~  267 (415)
                      +++.+++++|+++|+++++++++||+|.+....... .....+....+.++ .||||.|+++   +| |+++++      
T Consensus       143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~-~~~~~~~~~~~~~~-~s~SK~~~~~---~G~~~~~~~------  211 (333)
T PRK10534        143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYG-CELKEITQYCDSFT-ICLSKGLGTP---VGSLLVGNR------  211 (333)
T ss_pred             ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcC-CCHHHHHhcCCEEE-EEeEcCCCCc---ccceEEcCH------
Confidence            999999999999999999999999998743211001 11111111112222 3899998654   67 576543      


Q ss_pred             hHHHHHHHHhhccccC---CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEe
Q 014936          268 KPKVVERMKKYFDILG---DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK  344 (415)
Q Consensus       268 ~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~  344 (415)
                        ++++.++.....+.   ..+...+.++...|++     ..+..++..++++++.+.|+++ |+. + .+..++|+|++
T Consensus       212 --~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~~~~~nfv~~~  281 (333)
T PRK10534        212 --DYIKRARRWRKMTGGGMRQAGILAAAGLYALKH-----NVARLQEDHDNAAWLAEQLREA-GAD-V-MRQDTNMLFVR  281 (333)
T ss_pred             --HHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCCceEEEEE
Confidence              68888876643221   2233556666556642     1233344556778999999988 787 4 34479999998


Q ss_pred             cCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936          345 LNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       345 l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~  406 (415)
                      ++.      .+..++ .++|+++||.+.|+.      ++|++..  .+++++++++++|++++.
T Consensus       282 ~~~------~~~~~~-~~~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~  332 (333)
T PRK10534        282 VGE------EQAAAL-GEYMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA  332 (333)
T ss_pred             CCc------hhHHHH-HHHHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence            862      134444 556678899998873      5788773  689999999999987653

>PRK07179 hypothetical protein; Provisional

Probab=99.98  E-value=2e-29  Score=239.93  Aligned_cols=332  Identities=13%  Similarity=0.084  Sum_probs=233.3

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC---C--CCCC-CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE---K--FNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~---~--~~~y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      .+..+++|+.++   +.++..+|++++++.+++...   .  ...+ .......+|++.+|+++        ..+.++++
T Consensus        52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~--------g~~~~~~~  120 (407)
T PRK07179         52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT--------GFESCLLC  120 (407)
T ss_pred             CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh--------CCCcEEEE
Confidence            345678888877   667888999999999988631   1  1111 11124678888898887        23567889


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCc
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNP  185 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~np  185 (415)
                      +||++|+..++.++..+||.|+++.+.|.+....++..|.++..+++       .|++++++++++ .+++|++.+|+||
T Consensus       121 ~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~  193 (407)
T PRK07179        121 QSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYST  193 (407)
T ss_pred             CCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence            99999999999999999999999999999988888888888766543       488999998865 4778888899999


Q ss_pred             cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC-eEEEccCccccCCCCceEEEEEeeCCCC
Q 014936          186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (415)
Q Consensus       186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~  264 (415)
                      ||.+.|   +++|.++|+++|+++|+||+|+.+.++..+...+..++.... .+++.|+||+++   .|+||+++++   
T Consensus       194 tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~---  264 (407)
T PRK07179        194 TGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPR---  264 (407)
T ss_pred             CCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCH---
Confidence            999977   677888889999999999999865543322222223332222 378889999975   3689999864   


Q ss_pred             CCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEE
Q 014936          265 MFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV  341 (415)
Q Consensus       265 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  341 (415)
                           ++++.+.....   +..+.++....++.++++..  ...+..+++++++++++.+.|+++ ++. + . ..+.++
T Consensus       265 -----~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v-~-~~~~i~  333 (407)
T PRK07179        265 -----ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYN-I-R-SESQII  333 (407)
T ss_pred             -----HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-C-C-CCCCEE
Confidence                 56665543321   22333444434444444431  223457788999999999999988 776 4 2 345677


Q ss_pred             EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG---LKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ++.++..      ...+.+...|.++||.+..-....   ..+++||+++  +++++++++++.|++++++.
T Consensus       334 ~l~~~~~------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        334 ALETGSE------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV  399 (407)
T ss_pred             EEEeCCH------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence            7766421      133444445567899743211111   2478999995  68999999999999887753

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.98  E-value=1.2e-29  Score=240.19  Aligned_cols=339  Identities=17%  Similarity=0.137  Sum_probs=226.1

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++||..|.-....+. .+|.+.+++.+++.....  .+.. ...+....+++.+.+..    ..+++++++||++
T Consensus        28 ~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~sGse   99 (389)
T PRK01278         28 EDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSNL-YRIPEQERLAERLVENS----FADKVFFTNSGAE   99 (389)
T ss_pred             CCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--cccc-cCChHHHHHHHHHHhhC----CCCEEEEcCCcHH
Confidence            35888999988753322233 579999999999875221  1111 11233334444443311    3479999999999


Q ss_pred             HHHHHHHHh----cCCCC----EEEEcCCCCcchHHHHHhCCCeEEEeec-cC-CCCCC----CChhHHHhhcCCCceEE
Q 014936          112 AIDVAMALL----SRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDL-LP-DKGWE----VDLDDIESLADQNTVAL  177 (415)
Q Consensus       112 al~~~~~~l----~~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~~~~~l~~~~~~~~~~v  177 (415)
                      |+..+++++    .++||    +|++.+++|+++...+...+........ .+ ..++.    .|++.+++.+++++++|
T Consensus       100 A~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~av  179 (389)
T PRK01278        100 AVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAI  179 (389)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEE
Confidence            999999887    34666    8999999999987766555433222110 00 11111    48999999998778887


Q ss_pred             EecCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          178 VIINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       178 ~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      ++..++|++| .++|.+++++|.++|++||+++|+||+|.++.+.+.... ....+....   +.|+||.++ +|+|+||
T Consensus       180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~-~~~~~~~pd---i~t~sK~l~-~G~~ig~  254 (389)
T PRK01278        180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFA-HEWAGVTPD---IMAVAKGIG-GGFPLGA  254 (389)
T ss_pred             EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccee-ecccCCCCC---EEEEehhcc-CCcceEE
Confidence            7776688888 788999999999999999999999999998766554221 112222222   347899975 8999999


Q ss_pred             EEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh----cCCCCcC
Q 014936          257 FVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK----EIPCISC  331 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~  331 (415)
                      +++++        ++++.+.... ..+.+.+++.|.++.+.|+...+.   +..++++++.+++.+.|+    ..+++..
T Consensus       255 ~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~  323 (389)
T PRK01278        255 CLATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIE  323 (389)
T ss_pred             EEEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCcee
Confidence            99975        5666665442 334568889999988777542111   122333333333333333    3332221


Q ss_pred             CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      . ....|.+++++++.       +..++...++++ ||.+.|+.    .+++||++  ..+++++++++++|.+++++
T Consensus       324 ~-v~g~G~~~~i~~~~-------~~~~~~~~l~~~-GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        324 E-VRGKGLLLGLKCVV-------PNRDLVQALRDE-GLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES  388 (389)
T ss_pred             e-EecccEEEEEEEec-------CHHHHHHHHHHC-CeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence            2 33467888877742       466777877655 99999874    47999997  47899999999999988764

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.98  E-value=6.6e-30  Score=239.56  Aligned_cols=319  Identities=16%  Similarity=0.134  Sum_probs=226.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANIL  128 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~-~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l~~~gd~vi  128 (415)
                      .++++++.+++.+.+..   ..|+.. .-..++++.+++++      ++++ +.+++++|+++++.+++.++.++||+|+
T Consensus         8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl   78 (356)
T cd06451           8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF------QTENGLTFLLSGSGTGAMEAALSNLLEPGDKVL   78 (356)
T ss_pred             cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh------cCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence            56778888888654321   233321 11446677777776      3434 4578899999999999999999999999


Q ss_pred             EcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhc
Q 014936          129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKL  205 (415)
Q Consensus       129 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  205 (415)
                      ++.++|++  +...++..|+++..++.++  ++.+|++++++.+++ +++++++++|+||+|.+++   +++|+++|+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~  153 (356)
T cd06451          79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH  153 (356)
T ss_pred             EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence            99988876  4567788999999998754  356899999999987 8899999999999999976   56677788899


Q ss_pred             CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh---hc---
Q 014936          206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK---YF---  279 (415)
Q Consensus       206 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~~---  279 (415)
                      |+++++|++|+..    .....+...+.   .+++.|++|+++.+ .++||++.++        ++++.+..   ..   
T Consensus       154 ~~~li~D~~~~~g----~~~~~~~~~~~---d~~~~s~~K~l~~p-~g~G~l~~~~--------~~~~~~~~~~~~~~~~  217 (356)
T cd06451         154 DALLIVDAVSSLG----GEPFRMDEWGV---DVAYTGSQKALGAP-PGLGPIAFSE--------RALERIKKKTKPKGFY  217 (356)
T ss_pred             CCEEEEeeehhcc----CccccccccCc---cEEEecCchhccCC-CCcceeEECH--------HHHHHHHhcCCCCcee
Confidence            9999999998752    22222222222   25667889997654 3489999865        45555432   00   


Q ss_pred             --------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEEEE
Q 014936          280 --------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAVML  343 (415)
Q Consensus       280 --------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~  343 (415)
                                    ....+++...+.++.++++......+++..++.+++++++.+.|+.+ ++.....+.  .+.++|+
T Consensus       218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~  296 (356)
T cd06451         218 FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAV  296 (356)
T ss_pred             ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEE
Confidence                          11234455555666666654333556778888899999999999987 666332222  3445566


Q ss_pred             ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936          344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~  405 (415)
                      .++..     .+..+++..+.+++||.+.+|..+..+++||++++  +++++++++++.|++++
T Consensus       297 ~~~~~-----~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~  355 (356)
T cd06451         297 LVPEG-----VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL  355 (356)
T ss_pred             ECCCC-----CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            66531     24567777765444999999886655689999995  68999999999998865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.98  E-value=8.2e-30  Score=223.62  Aligned_cols=357  Identities=19%  Similarity=0.225  Sum_probs=270.8

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL   94 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~   94 (415)
                      +|..+...+.++-     ....|||++|.- +.....|.-+.|++|-+..+.......|-+..|.+++++.+++.+   +
T Consensus        12 pIlgL~e~f~~D~-----R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll---F   83 (396)
T COG1448          12 PILGLKEAFKADP-----RPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL---F   83 (396)
T ss_pred             chhHHHHHHhcCC-----CcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh---c
Confidence            7777777777665     567899999962 222235667888888888777766678999999999999999998   4


Q ss_pred             CCC---CCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936           95 PYK---LTPNDV--FVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE  167 (415)
Q Consensus        95 ~~~---~~~~~i--~i~~g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  167 (415)
                      |.+   +..+++  +=|.|||.|+.++...+.  .+..+|.+++|+|+++...+...|.++..++.-...+..+|.+.+.
T Consensus        84 G~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~ml  163 (396)
T COG1448          84 GADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGML  163 (396)
T ss_pred             CCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHH
Confidence            433   344454  568999999999988875  4556799999999999999999999999999755555568988887


Q ss_pred             hhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-CcccccccC-CCCCeEEEcc
Q 014936          168 SLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG-STVPILTLGS  242 (415)
Q Consensus       168 ~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s  242 (415)
                      ..++.   +...++...+|||||..++.+++++|+++.++.|.+.+.|-+|.+|.-+.. ....+..+. ....+++..|
T Consensus       164 a~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S  243 (396)
T COG1448         164 ADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASS  243 (396)
T ss_pred             HHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEeh
Confidence            66653   334445556699999999999999999999999999999999999764421 111122121 1123799999


Q ss_pred             CccccCCCCceEEEEEeeCCCCCCChHHHHHHH----Hhh-ccccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHH
Q 014936          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM----KKY-FDILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLL  312 (415)
Q Consensus       243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~  312 (415)
                      +||.|++.|-|+|++..-.+     +.+..+.+    ... +...++++..+...+..+|++..     +..++.+++++
T Consensus       244 ~SKnfgLYgERVGa~~vva~-----~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri  318 (396)
T COG1448         244 FSKNFGLYGERVGALSVVAE-----DAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRI  318 (396)
T ss_pred             hhhhhhhhhhccceeEEEeC-----CHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999755321     22333333    333 23457788889999999998754     35567788999


Q ss_pred             HHHHHHHHHHhhcC-C--CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e
Q 014936          313 KQSVDICYNKIKEI-P--CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A  388 (415)
Q Consensus       313 ~~~~~~l~~~l~~~-~--~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~  388 (415)
                      .++|..|.+.|+.. +  .+. ....+.|+|.+..+.          .+.+.+|.++++|.+..+.        |||+ +
T Consensus       319 ~~mR~~lv~~L~~~~~~~~f~-~i~~Q~GMFsy~Gls----------~~QV~rLree~~IY~v~sG--------Ri~vaG  379 (396)
T COG1448         319 LEMRQALVDALKALGAPRNFD-FIISQRGMFSYTGLS----------PEQVDRLREEFGIYLVASG--------RINVAG  379 (396)
T ss_pred             HHHHHHHHHHHHhhCCCcccc-hHhhcCceeecCCCC----------HHHHHHHHHhccEEEecCC--------eeeecc
Confidence            99999999999973 2  366 447788999987653          3456788899999987643        9999 6


Q ss_pred             CChhhHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSF  404 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~  404 (415)
                      .++.+++.+.+.|.++
T Consensus       380 l~~~ni~~va~ai~~v  395 (396)
T COG1448         380 LNTSNIDYVAKAIAAV  395 (396)
T ss_pred             CChhhHHHHHHHHHhh
Confidence            8999999999988765

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.97  E-value=2e-29  Score=236.58  Aligned_cols=321  Identities=13%  Similarity=0.099  Sum_probs=220.7

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCC--CC-----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCC
Q 014936           52 HTTHVATEAVAEALLSEKFNGY--AP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG  124 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~g  124 (415)
                      .+.++..+++.+........++  +.     ..-+.++++.+|+++        ..+.+++++|+++++..++.++.++|
T Consensus        19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~--------g~~~~~i~~g~~~a~~~~~~~l~~~g   90 (370)
T TIGR02539        19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFL--------GMDEARVTHGAREGKFAVMHALCKEG   90 (370)
T ss_pred             CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHh--------CCCceEEECChHHHHHHHHHHhhCCC
Confidence            4567788888776542111111  10     113567888899988        23567789999999999999999999


Q ss_pred             CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-------CceEEEecCCCCccccCCCHHHHHH
Q 014936          125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQK  197 (415)
Q Consensus       125 d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~  197 (415)
                      |.|+++.+.|++....++..|+++..++++.+.++.+|+++|++.+++       ++++|++++|+||+|..   .++++
T Consensus        91 d~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~---~~l~~  167 (370)
T TIGR02539        91 DWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNL---PDAGK  167 (370)
T ss_pred             CEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccc---cCHHH
Confidence            999999999887778889999999999986555678999999998752       57889999999999998   45778


Q ss_pred             HHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh
Q 014936          198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK  277 (415)
Q Consensus       198 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  277 (415)
                      |+++|+++|+++|+|++|+.+...    ......+   ..++++|+||+++ +|.|+||+++++        ++++.++.
T Consensus       168 i~~la~~~~~~livDea~~~g~~~----~~~~~~~---~di~v~s~sK~~~-~~g~~G~l~~~~--------~~i~~l~~  231 (370)
T TIGR02539       168 VAKVCREKGVPLLLNCAYTVGRMP----VSAKEIG---ADFIVGSGHKSMA-ASGPCGVLGMSE--------EWEDIVLR  231 (370)
T ss_pred             HHHHHHHcCCeEEEECccccCCcC----CCHHHcC---CCEEEeeCccccc-CCCCEEEEEECH--------HHHhhhcc
Confidence            888899999999999999974211    1111222   2367799999986 566899999865        56776665


Q ss_pred             hcccc---------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCc
Q 014936          278 YFDIL---------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNL  347 (415)
Q Consensus       278 ~~~~~---------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~  347 (415)
                      .....         .+.....+.++..++... .++++...+.++. ++++.+.|+++ ++..+ ..|..++|++++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~  308 (370)
T TIGR02539       232 KSRYSPVKEVELLGCTSRGAPIVTMMASFPHV-VERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPG  308 (370)
T ss_pred             cccCCccceeeeecccccccHHHHHHHHHHHH-HHHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCc
Confidence            43210         111112344444444321 2444444444444 45899999988 67632 246778899887752


Q ss_pred             cc---cCCCCCHHHHHHHHHhhcCeE-EEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHHHH
Q 014936          348 SL---LDDIIDDIDFCFKLAKEESVI-ILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       348 ~~---~~~~~~~~~~~~~ll~~~gi~-v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ..   .+...+...+ .+.|.++||. +.++    .++++|+++ +.++++++++++.|++++++
T Consensus       309 ~~~~~~~~~~~~~~~-~~~L~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~  368 (370)
T TIGR02539       309 FHEIAQKHKRRGYFL-YEELKKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE  368 (370)
T ss_pred             hhHHhhhhccccHHH-HHHHHhCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence            10   0001122334 4445677997 5543    357999997 56899999999999887654

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.97  E-value=2.3e-29  Score=239.74  Aligned_cols=333  Identities=16%  Similarity=0.118  Sum_probs=232.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++++++|++++   +.+++.+|.+++++.+.+.....      ..|++.....+|++.+|+++      + . +..++.+
T Consensus        45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~------g-~-~~~~~~~  113 (407)
T PRK09064         45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH------G-K-EAALVFT  113 (407)
T ss_pred             CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh------C-C-CcEEEEC
Confidence            46789999998   66788899999999988764221      12333445678888888887      2 2 3445555


Q ss_pred             ChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecC
Q 014936          108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN  181 (415)
Q Consensus       108 g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~  181 (415)
                      +|++++..++..+..  +++.|+.....|.+....+...+.++..+++       .|++++++.++    +++++|++++
T Consensus       114 sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~  186 (407)
T PRK09064        114 SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES  186 (407)
T ss_pred             cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence            566787877877654  7777777777787777777777887766553       36677776664    4678999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      |+||+|.+.+   +++|.++|+++|+++|+||+|+.+.++..+.......+. ....++++||||+|+++|   ||++++
T Consensus       187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~  260 (407)
T PRK09064        187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS  260 (407)
T ss_pred             CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC
Confidence            9999999965   888888889999999999999854443222111111111 123588899999998888   998875


Q ss_pred             CCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +        ++++.+.....   ++...++..+.++.+.++...  .....+++++++++++.+.|+++ ++. + .+..
T Consensus       261 ~--------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~  327 (407)
T PRK09064        261 A--------ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLK--ESNEERERHQERAAKLKAALDAA-GIP-V-MPNE  327 (407)
T ss_pred             H--------HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCC-C-CCCC
Confidence            4        57776654421   233456667777767665321  11334678889999999999987 676 3 3344


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +.++++.++..     ....++...+++++||.+.+...+..   .+++||+++  +++++++.+++.|+++++++
T Consensus       328 ~~iv~i~~~~~-----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~  398 (407)
T PRK09064        328 SHIVPVMVGDP-----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL  398 (407)
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence            66666655421     12456777776677999988655433   268999994  68999999999999988654

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.97  E-value=1e-29  Score=240.40  Aligned_cols=333  Identities=18%  Similarity=0.158  Sum_probs=229.2

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +++.++||..|.+....+ ..+|.+.+++.+.+....  ...|++ ....++++.+++++    |    .+++++++|++
T Consensus        25 ~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----g----~~~~~~~~sg~   94 (379)
T TIGR00707        25 NGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLYYT-EPQEELAEKLVEHS----G----ADRVFFCNSGA   94 (379)
T ss_pred             CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccCC-HHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence            478899999975322222 245899999998877532  123432 33455666666665    2    35999999999


Q ss_pred             HHHHHHHHHhc---C----CCCEEEEcCCCCcchHHHHHhCCCeEEE----eeccCCCCCC--CChhHHHhhcCCCceEE
Q 014936          111 QAIDVAMALLS---R----PGANILLPRPGFPIYELSAAFRHIEVRH----FDLLPDKGWE--VDLDDIESLADQNTVAL  177 (415)
Q Consensus       111 ~al~~~~~~l~---~----~gd~vi~~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~~--~~~~~l~~~~~~~~~~v  177 (415)
                      +++..+++++.   .    +||+|++++|+|+.+...+...+.....    .+...+..+.  .|++.+++.++++++++
T Consensus        95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v  174 (379)
T TIGR00707        95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAV  174 (379)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEE
Confidence            99999998662   2    3799999999999887776655543321    1111111111  17899999988788888


Q ss_pred             EecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          178 VIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       178 ~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      ++..++||+|.. ++.+++++|.++|+++|+++|+||+|.++.+.+.. .++...+..++++   +|||.++ +|+|+||
T Consensus       175 ~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG~  249 (379)
T TIGR00707       175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIGA  249 (379)
T ss_pred             EEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccEE
Confidence            886556777764 78999999999999999999999999987655432 2222222223333   6899987 9999999


Q ss_pred             EEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC--CC
Q 014936          257 FVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC--PH  333 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~  333 (415)
                      +++++        ++++.+... .....+.+++.|.++.++|+...   ..+..++++++++.+.+.|+++ +...  ..
T Consensus       250 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~  317 (379)
T TIGR00707       250 TLAKE--------EVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE---KERLLENVKEKGDYFKERLEEL-GKNYPNKE  317 (379)
T ss_pred             EEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHH-HhhCCCCc
Confidence            99865        677777654 22345678899999988886321   1245566777777777777653 1110  11


Q ss_pred             CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936          334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF  404 (415)
Q Consensus       334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~  404 (415)
                      .+..|+++|+.++.       +..++... |.++||.+.|+.    .+++|+++  ..+++++++++++|+++
T Consensus       318 ~~~~g~~~~~~~~~-------~~~~~~~~-l~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~  378 (379)
T TIGR00707       318 VRGKGLMLGIELEA-------PCKDIVKK-ALEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEA  378 (379)
T ss_pred             cccCceEEEEEecC-------cHHHHHHH-HHHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence            23468888888753       34556655 567799999864    47899997  36899999999999875

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.97  E-value=8.6e-30  Score=237.23  Aligned_cols=313  Identities=15%  Similarity=0.105  Sum_probs=222.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~  130 (415)
                      +++++.+++++.+.....  ..|++.....++++.+++++      +  ++++++++|+++++..++.++.++||+|+++
T Consensus         8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~   77 (338)
T cd06502           8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGGSVICH   77 (338)
T ss_pred             CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence            668899999998865432  25655567788999999887      2  5678888888999999999999999999999


Q ss_pred             CCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-------CceEEEecCCCCccccCCCHHHHHHHHH
Q 014936          131 RPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQKLAE  200 (415)
Q Consensus       131 ~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~i~~  200 (415)
                      .|+|..+..   .+...|+++..++.+   .+.+|++++++++++       +++++++++|+|| |.+++.+++++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~  153 (338)
T cd06502          78 ETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA  153 (338)
T ss_pred             cCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence            999986543   345579999888763   256899999998864       6889999999997 66779999999999


Q ss_pred             HHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc
Q 014936          201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD  280 (415)
Q Consensus       201 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  280 (415)
                      +|+++|+++|+||+|..+.....+. ++..+....+ +++.|+||+|+++|   |+++..+       +++++.++....
T Consensus       154 ~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~-------~~~~~~~~~~~~  221 (338)
T cd06502         154 LAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGN-------RDFIARARRRRK  221 (338)
T ss_pred             HHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECC-------HHHHHHHHHHHH
Confidence            9999999999999986443211111 2222212222 45779999998887   5544322       257777765532


Q ss_pred             ---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHH
Q 014936          281 ---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDI  357 (415)
Q Consensus       281 ---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~  357 (415)
                         .+...+++.+.++...|+..   .+.+..+++.++++++.+.|+++ ++. + .+..++++.++++...    ....
T Consensus       222 ~~~~~~~~~~~~~~a~~~~L~~~---~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~v~~~~~~----~~~~  291 (338)
T cd06502         222 QAGGGMRQSGFLAAAGLAALEND---LWLRRLRHDHEMARRLAEALEEL-GGL-E-SEVQTNIVLLDPVEAN----AVFV  291 (338)
T ss_pred             HhCCChhhHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHhc-CCC-c-ccccCCeEEEecCCcc----HHHH
Confidence               12345667777777777652   23455678888889999999988 454 3 3455667776664210    0112


Q ss_pred             HHHHHHH--hhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHH
Q 014936          358 DFCFKLA--KEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKS  403 (415)
Q Consensus       358 ~~~~~ll--~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~  403 (415)
                      ++..++.  .++|+.+.+..    .+++|++++  +++++++++++++++
T Consensus       292 ~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         292 ELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             HHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence            2333222  15699987753    278999995  588999999998864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PLN02721 threonine aldolase

Probab=99.97  E-value=3e-29  Score=235.04  Aligned_cols=328  Identities=16%  Similarity=0.145  Sum_probs=220.9

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      .+++|+.+.+.    . +++.+.+++.+.........|++  ...++|++++++++        .+.++++++|++++..
T Consensus         6 ~~~~~~~~~~~----~-~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~--------~~~~~~~~~Gs~a~~~   70 (353)
T PLN02721          6 RVVDLRSDTVT----K-PTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFG--------KEAALFVPSGTMGNLI   70 (353)
T ss_pred             hhhhhhccccc----C-CCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhC--------CceeEEecCccHHHHH
Confidence            46899999865    2 56888888876412222223433  36899999999993        2345666667777778


Q ss_pred             HHHHhcC-CCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-------CCceEEEecCC-C
Q 014936          116 AMALLSR-PGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QNTVALVIINP-G  183 (415)
Q Consensus       116 ~~~~l~~-~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~i~~p-~  183 (415)
                      ++.++++ +||+|++++|+|.....   .+...|+++..++.+  .++.+|++.+++.++       +++++++++++ +
T Consensus        71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~  148 (353)
T PLN02721         71 SVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHA  148 (353)
T ss_pred             HHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEecccc
Confidence            8887777 99999999999876555   567789999888764  345689999999987       57888999775 7


Q ss_pred             CccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (415)
Q Consensus       184 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  263 (415)
                      ||+|.++|.+++++|+++|+++|+++|+|++|........+. ....+..... .++.|+||+|++   ++||++..+  
T Consensus       149 np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~l~~---~~G~~~~~~--  221 (353)
T PLN02721        149 NCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVKAAD-SVSVCLSKGLGA---PVGSVIVGS--  221 (353)
T ss_pred             ccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhhhCC-EEEEecccccCC---ceeeEEecC--
Confidence            899999999999999999999999999999986432110011 1111111111 344579999754   357644322  


Q ss_pred             CCCChHHHHHHHHhhccc-cCCchhHHHHHH--HHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC-CCCCCCce
Q 014936          264 GMFRKPKVVERMKKYFDI-LGDPATFIQAAV--PSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC-PHKPEGSM  339 (415)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~p~~g~  339 (415)
                           +++++.+...... ....+...+.++  ...++    ++.+. .++..++++.+.+.|++++++.. + .+..++
T Consensus       222 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~  290 (353)
T PLN02721        222 -----KSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQ----ENVPK-LEDDHKKAKLLAEGLNQIKGLRVNV-AAVETN  290 (353)
T ss_pred             -----HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHH----HHHHH-HHHHHHHHHHHHHHHHhCCCcEEec-CCccce
Confidence                 2566665544321 122222222222  22232    23333 33445678889999998877742 3 344466


Q ss_pred             EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936          340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~  406 (415)
                      ++|++++...  + .+..++...+ .++||.+.|+.    .+++|++++  .+++++++++++|++++.
T Consensus       291 ~~~~~~~~~~--~-~~~~~~~~~L-~~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~  351 (353)
T PLN02721        291 IVYFDITDGS--R-ITAEKLCKSL-EEHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAAL  351 (353)
T ss_pred             EEEEEccCCc--c-ccHHHHHHHH-HhCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence            7898886410  0 1355666666 57899999975    478999995  689999999999988764

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.97  E-value=4.4e-29  Score=223.64  Aligned_cols=331  Identities=15%  Similarity=0.157  Sum_probs=248.6

Q ss_pred             CCCcHHHHHHHHHHHhcC-----CCCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh--c
Q 014936           51 FHTTHVATEAVAEALLSE-----KFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL--S  121 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~-----~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l--~  121 (415)
                      .++.|++++++...+...     ..+.|+  ......+.|+.||+.+      ++++++|++|+|+||++++++...  .
T Consensus        11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a   84 (386)
T COG1104          11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALA   84 (386)
T ss_pred             CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCcHHHHHHHHhhHHh
Confidence            466799999998887642     112222  1134678899999998      678999999999999999999883  2


Q ss_pred             ----CCCCEEEEcCCCCcchHHHHHhC---CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          122 ----RPGANILLPRPGFPIYELSAAFR---HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       122 ----~~gd~vi~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                          +.|.+|+++.-.|++..+.++..   |.+|.+++++.  +..+|+++|+++++++|.+|.+.+.||.+|++   .+
T Consensus        85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~aNnE~G~I---Qp  159 (386)
T COG1104          85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMHANNETGTI---QP  159 (386)
T ss_pred             hhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEecccCeeec---cc
Confidence                25789999999999988877655   99999999865  44699999999999999999999999999999   77


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +++|.++|+++++++++|.+++.    |+-+..+..+..+   +...|.+|.+|..|  +|+++.++.  ..-.|-+..-
T Consensus       160 I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~vD---~ls~SaHK~~GpkG--iGaLyv~~~--~~~~p~i~GG  228 (386)
T COG1104         160 IAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGVD---LLSFSAHKFGGPKG--IGALYVRPG--VRLEPLIHGG  228 (386)
T ss_pred             HHHHHHHHHHcCCeEEEehhhhc----CceeccccccCcc---eEEeehhhccCCCc--eEEEEECCC--CccCceeccC
Confidence            89999999999999999999998    5555555554433   55667899988888  888887442  2211222222


Q ss_pred             HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC-CCCcCCCC--CCCceEEEEecCccccC
Q 014936          275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI-PCISCPHK--PEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~--p~~g~~~~~~l~~~~~~  351 (415)
                      -+......++.+.++..++..+++. ..+.++....++++.++.|.+.|... |.+.....  +.-.+.+.+.++.    
T Consensus       229 gQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g----  303 (386)
T COG1104         229 GQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG----  303 (386)
T ss_pred             cCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC----
Confidence            2333233567777777777777764 23667888899999999999999964 66552222  2223445555553    


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                       + ..+.+.. .|..+||.++.|+.|..                   .+.||||++  ++++|++.+++.|.+++++++.
T Consensus       304 -v-~gE~ll~-~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~  380 (386)
T COG1104         304 -V-EGESLLL-ALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE  380 (386)
T ss_pred             -C-cHHHHHH-hccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence             2 3444444 45778999999999864                   368999995  6899999999999999999876


Q ss_pred             H
Q 014936          411 Q  411 (415)
Q Consensus       411 ~  411 (415)
                      .
T Consensus       381 ~  381 (386)
T COG1104         381 L  381 (386)
T ss_pred             h
Confidence            4

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.97  E-value=6.1e-29  Score=232.60  Aligned_cols=327  Identities=17%  Similarity=0.152  Sum_probs=225.8

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCC----CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGY----APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+++|+.++   +.+.+.+|++.+++++.+++...  ..|    +......++++.+++++    +  .  ++.++++++
T Consensus         2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~iv~~sg   70 (349)
T cd06454           2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K--EAALVFSSG   70 (349)
T ss_pred             CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C--CCEEEeccH
Confidence            467888776   44556679999999999874211  112    22333466777777766    2  2  245666666


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----CceEEEecCCCC
Q 014936          110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGN  184 (415)
Q Consensus       110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~n  184 (415)
                      ++++..++.+++++||.|+++.|+|+.+...++..|+++..++.       +|.+.+++.+++     +++++++++|+|
T Consensus        71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~  143 (349)
T cd06454          71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS  143 (349)
T ss_pred             HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence            78888888888899999999999999988888889999887652       467777777653     467778889999


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  263 (415)
                      |||...   ++++|+++|+++|+++|+|++|+.+.+..... .........+.+++++|+||.++++|   ||++.++  
T Consensus       144 ~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~--  215 (349)
T cd06454         144 MDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK--  215 (349)
T ss_pred             CCCCcc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH--
Confidence            999984   47888899999999999999997644321111 00111123345699999999987765   8888754  


Q ss_pred             CCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE
Q 014936          264 GMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA  340 (415)
Q Consensus       264 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~  340 (415)
                            ++.+.+.....   .+...++..+.++.+.++...+  .+..++++.++++.+.+.|+++ ++..+ .+.++.+
T Consensus       216 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~  285 (349)
T cd06454         216 ------ELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVG-GSPSHII  285 (349)
T ss_pred             ------HHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCcE
Confidence                  56666554321   1234566666677777654221  4567788999999999999887 66633 3434444


Q ss_pred             EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG---LKNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      .++.++..     .+..++...+++ .||.+.++....   ..+++|++++  .+++++++++++|+++
T Consensus       286 ~~~~~~~~-----~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         286 PPLIGDDP-----AKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             EEEeCCCh-----HHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            44434311     135667677655 599998764322   1478999996  5899999999999764

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.97  E-value=2.3e-29  Score=238.96  Aligned_cols=334  Identities=16%  Similarity=0.112  Sum_probs=233.8

Q ss_pred             ccCcceeEecccCCCCCCCCCC-cHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFHT-THVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .+++.++||..|.+...  ++. +|.+.+++.+++....  ...|+.+.+ .++.+.+++++    + ...++++++++|
T Consensus        40 ~dg~~~lD~~s~~~~~~--lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~-~~~~~~v~~~~s  111 (398)
T PRK03244         40 VDGKEYLDLLGGIAVNA--LGHAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----G-APEGGRVFFCNS  111 (398)
T ss_pred             CCCCEEEECCcCHhhcc--CCCCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----C-CCCCCEEEEeCc
Confidence            35788999988764322  343 7999999999887532  234654322 45666665554    3 123579999999


Q ss_pred             hHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhC-CCe------------EEEeeccCCCCCCCChhHHHhhcCCCc
Q 014936          109 CTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPDKGWEVDLDDIESLADQNT  174 (415)
Q Consensus       109 ~~~al~~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~  174 (415)
                      +++++..+++.+..+| +.|+..+++|+++...+... |..            +..++.       .|++.+++.+.+++
T Consensus       112 gsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~  184 (398)
T PRK03244        112 GAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDT  184 (398)
T ss_pred             hHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCe
Confidence            9999999999776666 46777778998875544322 211            111211       37899999887778


Q ss_pred             eEEEecCCCCccccCCCHHH-HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936          175 VALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       175 ~~v~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      +++++..++||+|.+++.++ +++|.++|++||+++|+||+|.++...|... .+...+..+++   .+|||+++ +|+|
T Consensus       185 ~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~  259 (398)
T PRK03244        185 AAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLP  259 (398)
T ss_pred             EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCcc
Confidence            88888888999999986655 9999999999999999999998876655422 11122222233   37899976 8999


Q ss_pred             EEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          254 LGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       254 ~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      +||+++++        ++++.+... ...++..+++.+.++.+.|+...   -++..++++++.+++.+.|+++ +...+
T Consensus       260 ig~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~~~  327 (398)
T PRK03244        260 IGACLAFG--------PAADLLTPGLHGSTFGGNPVACAAALAVLDTIA---SEGLLENAERLGEQLRAGIEAL-GHPLV  327 (398)
T ss_pred             cEEEEEcH--------HHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHhc-CCCce
Confidence            99999976        577766543 23356788999999999986421   1245577777788888888875 22211


Q ss_pred             -CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          333 -HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       333 -~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                       .....|+++|+.++..      ....+...+ .++||.+.+..    .++||++++  .++++++.++++|.+++++.
T Consensus       328 ~~v~g~g~~~~i~~~~~------~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~  395 (398)
T PRK03244        328 DHVRGRGLLLGIVLTAP------VAKAVEAAA-REAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAA  395 (398)
T ss_pred             eeEeeccEEEEEEEecc------HHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence             1345788999988531      244555555 56799998742    478999983  68999999999999998753

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=2.3e-28  Score=227.85  Aligned_cols=333  Identities=18%  Similarity=0.230  Sum_probs=253.2

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CC--CCCCC----CCCcHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KF--NGYAP----TAGLPLTRRAIAEYLSRDLPYKLT-PNDVF  104 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~--~~y~~----~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~  104 (415)
                      +++++.|+.+-.+     ..+..+.+++.+.....  ..  ..|..    +.-+++.|+.+|++++      .+ .++|+
T Consensus        20 ~~~~vylD~aa~~-----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~------a~~~~eIv   88 (405)
T COG0520          20 GKPLVYLDNAATS-----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN------ADSSDEIV   88 (405)
T ss_pred             CCCeEEecCcccc-----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhC------CCCCCeEE
Confidence            5677888877632     35788999998876421  11  12221    1346789999999984      46 48999


Q ss_pred             EeCChHHHHHHHHHHh---cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          105 VTSGCTQAIDVAMALL---SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       105 i~~g~~~al~~~~~~l---~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      +|+|+|++++.+..++   .++||+|++..-.|++    +...++..|++++.++.+  +++.++.+.+++.++++|++|
T Consensus        89 ft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~~Tklv  166 (405)
T COG0520          89 FTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITPKTKLV  166 (405)
T ss_pred             EeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCCCceEE
Confidence            9999999999999999   5899999999999985    455667789999999986  345689999999999999999


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC-CceEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGW  256 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~  256 (415)
                      .+++.+|.||++   .++++|+++|+++|+++++|.+|+.    +..+..++.++.+   ++..|.+|++..| |  +|.
T Consensus       167 ais~vSn~tG~~---~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f~afsgHKwl~gP~G--iGv  234 (405)
T COG0520         167 ALSHVSNVTGTV---NPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---FLAFSGHKWLLGPTG--IGV  234 (405)
T ss_pred             EEECcccccccc---chHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---EEEEcccccccCCCc--eEE
Confidence            999999999999   5699999999999999999999987    5555666777766   8888999954444 6  899


Q ss_pred             EEeeCCCCCCChHHHHHHHHhh-----------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936          257 FVTTDPCGMFRKPKVVERMKKY-----------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK  313 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  313 (415)
                      +++++        ++.+.+...                       ..-.++++......+.++++...+..++...++.+
T Consensus       235 Ly~r~--------~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~  306 (405)
T COG0520         235 LYVRK--------ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER  306 (405)
T ss_pred             EEEch--------HHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence            99876        455444110                       11124555556666666665544566788889999


Q ss_pred             HHHHHHHHHhhcCCCCcCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--------CCeE
Q 014936          314 QSVDICYNKIKEIPCISCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--------KNWL  383 (415)
Q Consensus       314 ~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~i  383 (415)
                      ++.+++.+.|+++|++.++..+.  .+..+.+.++.      ....++...| .++||.++.|..|..        +..+
T Consensus       307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~------~~~~dv~~~L-~~~gI~vr~g~~ca~p~~~~~~~~~~i  379 (405)
T COG0520         307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKG------IHPHDVATLL-DEKGIAVRAGHHCAQPLHRLLGVDATI  379 (405)
T ss_pred             HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCC------CCHHHHHHHH-HhCCeEEEeccccccHHHHhcCCCCce
Confidence            99999999999999998654442  34455555653      2456665555 667899999988753        4569


Q ss_pred             EEEee--CChhhHHHHHHHHHHHHH
Q 014936          384 RVTFA--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       384 Ri~~~--~~~~~l~~~l~~l~~~~~  406 (415)
                      |+|++  +++||++.+++.|+++.+
T Consensus       380 R~S~~~YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         380 RASLHLYNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             EEEEeecCCHHHHHHHHHHHHHHhh
Confidence            99996  689999999999998764

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.97  E-value=3.5e-28  Score=231.15  Aligned_cols=333  Identities=14%  Similarity=0.115  Sum_probs=230.9

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++++++|+.++   +.++..+|++++++.++++....      ..+....-..++++.+|++++        .+..++++
T Consensus        44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~  112 (406)
T PRK13393         44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFT  112 (406)
T ss_pred             CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeC
Confidence            46789999998   66677899999999999875221      111222235677788887762        35666666


Q ss_pred             ChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecC
Q 014936          108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN  181 (415)
Q Consensus       108 g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~  181 (415)
                      +|++++..++..+..  +|+.|+++...|..........|.++..+++       .|++.+++.++    +++++|++.+
T Consensus       113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~  185 (406)
T PRK13393        113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES  185 (406)
T ss_pred             CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence            667899999987765  7888888888888888888888888777654       25666665553    3567888999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC-CeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV-PILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      ++|++|.+.+   +++|.++|+++|+++|+||+|+.+.++..+.......+..+ ..++++||||.|+++|   ||++++
T Consensus       186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~  259 (406)
T PRK13393        186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS  259 (406)
T ss_pred             CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC
Confidence            9999999966   78888888999999999999985554432221111111112 3577889999999888   998875


Q ss_pred             CCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +        ++.+.++....   ++.+.++..+.++.++|+...+.  ...+++++++++++.+.|+++ ++. + .+..
T Consensus       260 ~--------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~  326 (406)
T PRK13393        260 A--------ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS--SAERERHQDRVARLRARLDKA-GIP-H-LPNP  326 (406)
T ss_pred             H--------HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHc-CCC-c-CCCC
Confidence            4        57777665432   23456677777777777643211  223466788899999999886 666 3 2344


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +.++.+.++..     .+..++...+++++||.+.++..+..   .+++||++.  +++++++++++.|+++++++
T Consensus       327 ~~i~~v~~~~~-----~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~  397 (406)
T PRK13393        327 SHIVPVMVGDP-----VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL  397 (406)
T ss_pred             CCeEEEEeCCH-----HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence            55555544321     12456666666557999988765443   368999994  78999999999999987653

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.97  E-value=2.1e-28  Score=233.00  Aligned_cols=339  Identities=16%  Similarity=0.104  Sum_probs=233.3

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      ++.++|..++      ...++.+++++.+.+...      ....|....+..++++.+++++++.+|.  +...|+++ |
T Consensus        19 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~~-s   89 (402)
T cd00378          19 RETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQPH-S   89 (402)
T ss_pred             HhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--CceeeecC-C
Confidence            5678997776      345789999998765311      1123445556677777766666655553  33455555 5


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-----HHhCCCeEEEeeccCC-CCCCCChhHHHhhcC-CCceEEEecC
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELS-----AAFRHIEVRHFDLLPD-KGWEVDLDDIESLAD-QNTVALVIIN  181 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~i~~  181 (415)
                      +++++..++.++.++||+|++++|+|.++...     ++..|.++..++...+ +++.+|++++++.+. ++++++++++
T Consensus        90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~  169 (402)
T cd00378          90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA  169 (402)
T ss_pred             cHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecC
Confidence            67999999999999999999999999876443     5667877777766443 257899999999885 5788888889


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEcccc-CCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY-GHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      |+||+  .   .++++|+++|+++|+++|+|++| .++.+.+....++.  ..  + ++++|+||++  +|+|.||++++
T Consensus       170 ~~~~~--~---~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~--d-v~~~s~sK~l--~G~~gg~i~~~  237 (402)
T cd00378         170 SAYPR--P---IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GA--D-VVTTTTHKTL--RGPRGGLILTR  237 (402)
T ss_pred             cccCC--C---cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CC--c-EEEeccccCC--CCCCceEEEec
Confidence            88764  3   35889999999999999999996 43334332222222  22  2 6789999985  78899999986


Q ss_pred             CCCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936          261 DPCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS  338 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  338 (415)
                      ++       ++.+.+.....  ...++......++..++......+.++++++++++++.+.+.|+++ ++.++..|.++
T Consensus       238 ~~-------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  309 (402)
T cd00378         238 KG-------ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDN  309 (402)
T ss_pred             cH-------HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCC
Confidence            42       46666655432  1122222333333333432222356778888999999999999988 77743346789


Q ss_pred             eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC------CCCeEEEEee------CChhhHHHHHHHHHHHHH
Q 014936          339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG------LKNWLRVTFA------VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------~~~~iRi~~~------~~~~~l~~~l~~l~~~~~  406 (415)
                      +++|++++...    .+.. .+..+++++||.+.++..+.      ...++|+++.      .++++++.+++.|+++++
T Consensus       310 ~~v~v~~~~~~----~~~~-~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~  384 (402)
T cd00378         310 HLVLVDLRPKG----ITGK-AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK  384 (402)
T ss_pred             eEEEEeCCccC----CCHH-HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence            99999986321    1233 44556788899997643222      2468999993      258999999999999776


Q ss_pred             H
Q 014936          407 R  407 (415)
Q Consensus       407 ~  407 (415)
                      +
T Consensus       385 ~  385 (402)
T cd00378         385 D  385 (402)
T ss_pred             c
Confidence            5

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.97  E-value=2.7e-28  Score=228.64  Aligned_cols=322  Identities=13%  Similarity=0.090  Sum_probs=220.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCC-----CCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC
Q 014936           51 FHTTHVATEAVAEALLSEKF-----NGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP  123 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~-----~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~  123 (415)
                      -+..+++.+++.+.......     ....  ...-..++++.+|+++      ++  +++++++|+++++..++.+++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~~   82 (361)
T cd06452          11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCEK   82 (361)
T ss_pred             CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence            56678899999888742110     0111  1124678999999987      33  78999999999999999999999


Q ss_pred             CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-------CCceEEEecCCCCccccCCCHHHHH
Q 014936          124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QNTVALVIINPGNPCGNVYSYQHLQ  196 (415)
Q Consensus       124 gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~i~~p~nptG~~~~~~~l~  196 (415)
                      ||+|+++.++|.+....++..|++++.++.+.+.++.+|+++++++++       ++++++++++|+||||..   .+++
T Consensus        83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~  159 (361)
T cd06452          83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAK  159 (361)
T ss_pred             CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHH
Confidence            999999999998887788999999999998655456899999998875       367899999999999988   6688


Q ss_pred             HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH
Q 014936          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK  276 (415)
Q Consensus       197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~  276 (415)
                      +|+++|+++|+++|+|++|+....    ......++.   .++++|+||+++ ++.|+||+++++        ++++.+.
T Consensus       160 ~i~~~~~~~~~~vivD~a~~~g~~----~~~~~~~~~---d~~~~s~~K~l~-~~~~~G~l~~~~--------~~~~~l~  223 (361)
T cd06452         160 KIAKVCHEYGVPLLLNGAYTVGRM----PVSGKELGA---DFIVGSGHKSMA-ASAPIGVLATTE--------EWADIVF  223 (361)
T ss_pred             HHHHHHHHcCCeEEEECCcccCCc----CCCHHHcCC---CEEEecCCcccc-CCCCeEEEEECH--------HHHHHHh
Confidence            889999999999999999985321    112222332   388999999976 455999999865        5667665


Q ss_pred             hhccc---------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC-CCCCceEEEEecC
Q 014936          277 KYFDI---------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH-KPEGSMAVMLKLN  346 (415)
Q Consensus       277 ~~~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~l~  346 (415)
                      .....         ..+.......++...++.. .+.++...+ ..++++++.+.|++++++.++. .+...+++.++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~-~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~  301 (361)
T cd06452         224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV-KERVKRWDE-EVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP  301 (361)
T ss_pred             ccccccccceeeeeccccCchHHHHHHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC
Confidence            53211         1111111233333333211 122333322 3345578889999988887331 2344566666654


Q ss_pred             cccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHH
Q 014936          347 LSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       347 ~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~  405 (415)
                      ....   .......++...| .++||.+..   .+...++|++. +.++++++.+++.|+++.
T Consensus       302 ~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~  360 (361)
T cd06452         302 SFDEIAKKHKRRGYFLYSEL-KKRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             CcchhhhhccccchhHHHHH-HHcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            1000   0001223566666 556998532   23356899999 668999999999988653

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.97  E-value=1.5e-28  Score=233.83  Aligned_cols=324  Identities=16%  Similarity=0.175  Sum_probs=224.4

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCC----cHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+.|..+.+     .++++.+++++.+.+.....   ..|....+    ..++|+.+++++      +.++++|++++|+
T Consensus        18 ~~yl~~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~------~~~~~~v~~~~~~   86 (397)
T TIGR01976        18 RVFFDNPAG-----TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL------NADPPEVVFGANA   86 (397)
T ss_pred             eEEecCCcc-----CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEeCCH
Confidence            588887763     34678899999888754211   23443222    357888888887      3456689999999


Q ss_pred             HHHHHHHHHHh---cCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936          110 TQAIDVAMALL---SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (415)
Q Consensus       110 ~~al~~~~~~l---~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  182 (415)
                      ++++..++.++   .++||+|+++++.|.+..    ..++..|+++..++.+++ ++.++++++++.++++++++++++|
T Consensus        87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~  165 (397)
T TIGR01976        87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA  165 (397)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence            99998877775   589999999999997643    456778999999987542 3568999999999888999999999


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  262 (415)
                      +||||.+.+   +++|+++|+++|+++++|+++..    +.....+..++.   .+++.|++|++   |.|+|++++++ 
T Consensus       166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~~~---d~~~~s~~K~~---g~~~G~l~~~~-  231 (397)
T TIGR01976       166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQATGA---DFLTCSAYKFF---GPHMGILWGRP-  231 (397)
T ss_pred             CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHHcCC---CEEEEechhhc---CCceEEEEEcH-
Confidence            999999964   78888888999999999999864    222222333332   26668999986   45689999865 


Q ss_pred             CCCCChHHHHHHHHhhcc-----------ccCCchhHHHHHH---HHhhCCCc-----------HHHHHHHHHHHHHHHH
Q 014936          263 CGMFRKPKVVERMKKYFD-----------ILGDPATFIQAAV---PSILQQPD-----------EVFFKKTLNLLKQSVD  317 (415)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~a~---~~~l~~~~-----------~~~~~~~~~~~~~~~~  317 (415)
                             ++++.+.....           ..++++.....++   ...+....           ..++++..++..+.++
T Consensus       232 -------~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~  304 (397)
T TIGR01976       232 -------ELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAE  304 (397)
T ss_pred             -------HHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHH
Confidence                   45544433211           0123333333333   33332211           0135677788888999


Q ss_pred             HHHHHhhcCCCCcCCCCC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----------CCCe
Q 014936          318 ICYNKIKEIPCISCPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----------LKNW  382 (415)
Q Consensus       318 ~l~~~l~~~~~~~~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----------~~~~  382 (415)
                      ++.+.|++++++.++ .+    ..+.++.+.++.      .+..++...| .++||.+..|..|.           ..++
T Consensus       305 ~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~  376 (397)
T TIGR01976       305 YLLVGLSDLPGVTLY-GVARLAARVPTVSFTVHG------LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGV  376 (397)
T ss_pred             HHHHHHhcCCCEEEe-CCCCccCCCceEEEEeCC------cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCe
Confidence            999999888667743 33    134566655542      1345566655 67799999886653           2468


Q ss_pred             EEEEee--CChhhHHHHHHHH
Q 014936          383 LRVTFA--VDPYSLEECLDRI  401 (415)
Q Consensus       383 iRi~~~--~~~~~l~~~l~~l  401 (415)
                      ||||+.  ++++|++.+++.|
T Consensus       377 iRis~~~~~t~~di~~l~~~l  397 (397)
T TIGR01976       377 VRVGLAHYNTAEEVDRLLEAL  397 (397)
T ss_pred             EEEEeeccCCHHHHHHHHHhC
Confidence            999994  6889999988764

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK02948 cysteine desulfurase; Provisional

Probab=99.97  E-value=9.6e-29  Score=233.60  Aligned_cols=325  Identities=14%  Similarity=0.080  Sum_probs=228.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--------CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP--------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-  121 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~--------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-  121 (415)
                      .++++.+++++.+.+..... .+..        ..-..++|+.+|+++      ++++++|++++|+++++..++.++. 
T Consensus        10 ~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~   82 (381)
T PRK02948         10 TPMSKEALQTYQKAASQYFG-NESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGGTESNYLAIQSLLN   82 (381)
T ss_pred             CCCCHHHHHHHHHHHHhcCC-CCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence            35678899999887763211 1110        112457778888887      4578899999999999999888875 


Q ss_pred             ---CCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936          122 ---RPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (415)
Q Consensus       122 ---~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  195 (415)
                         ++|+.|+++...|+++..   .++..|+++..++.+.  ++.+|++++++.++++++++++++|+||||.++|   +
T Consensus        83 ~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~  157 (381)
T PRK02948         83 ALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHANSEIGTIQP---I  157 (381)
T ss_pred             hccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehh---H
Confidence               578999999977766544   4567799999998753  3568999999999888999999999999999965   6


Q ss_pred             HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH-H
Q 014936          196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE-R  274 (415)
Q Consensus       196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~  274 (415)
                      ++|.++|+++|+++++|+++....    ....+..++   ..+++.|+||.++.+|  +|++++++...+.   .... .
T Consensus       158 ~~I~~l~~~~~~~vivD~~~~~g~----~~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~---~~~~~~  225 (381)
T PRK02948        158 AEIGALLKKYNVLFHSDCVQTFGK----LPIDVFEMG---IDSLSVSAHKIYGPKG--VGAVYINPQVRWK---PVFPGT  225 (381)
T ss_pred             HHHHHHHHHcCCEEEEEChhhccc----cccCcccCC---CCEEEecHHhcCCCCc--EEEEEEcCCCCCC---CcccCC
Confidence            678888889999999998887632    122222333   3477889999988888  8998876532111   0000 0


Q ss_pred             HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE-----EEEecCccc
Q 014936          275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA-----VMLKLNLSL  349 (415)
Q Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~-----~~~~l~~~~  349 (415)
                      ........++++.+.+.++.++++.. .+++++.+++++++++++.+.|+++ ++.+. ......+     +.+.++   
T Consensus       226 ~~~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~-~~~~~~~~~~~i~~~~~~---  299 (381)
T PRK02948        226 THEKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIE-VEGHSTSCLPHIIGVTIK---  299 (381)
T ss_pred             CCCCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEE-EeCCCccCcCCEEEEEeC---
Confidence            00111124677888888888888653 2467888899999999999999988 55422 2111122     111222   


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                        +. +..++...+ .++||.+.+|..|..                   .+++|+|++  ++++|++.+++.|+++++++
T Consensus       300 --~~-~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~  375 (381)
T PRK02948        300 --GI-EGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF  375 (381)
T ss_pred             --CC-CHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence              11 345555554 677999998875421                   368999995  68999999999999987765


Q ss_pred             H
Q 014936          409 A  409 (415)
Q Consensus       409 ~  409 (415)
                      .
T Consensus       376 ~  376 (381)
T PRK02948        376 Y  376 (381)
T ss_pred             h
Confidence            4

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.97  E-value=3.8e-28  Score=229.08  Aligned_cols=316  Identities=15%  Similarity=0.191  Sum_probs=222.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC--CCC------CCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHHHHHHHHHhc
Q 014936           51 FHTTHVATEAVAEALLSEKFN--GYA------PTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLS  121 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~--~y~------~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~al~~~~~~l~  121 (415)
                      .++++.+.+++.+.+......  ...      ......++|+.+++++      +.+ ++++++|+|+++++..++.++.
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~g~t~a~~~~~~~l~   82 (373)
T cd06453           9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI------NAPSPDEIIFTRNTTEAINLVAYGLG   82 (373)
T ss_pred             cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEEeCCHHHHHHHHHHHhh
Confidence            345688999998887532110  000      1123467888888888      345 6799999999999999999998


Q ss_pred             C---CCCEEEEcCCCCcch----HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          122 R---PGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       122 ~---~gd~vi~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      .   +||+|++++++|++.    ...++..|++++.++.+  .++.+|++++++.+.++++++++++|+||||.+.+   
T Consensus        83 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---  157 (373)
T cd06453          83 RANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---  157 (373)
T ss_pred             hcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---
Confidence            7   899999999999874    33445779999999875  34568999999999889999999999999999976   


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +++|.++|+++|+++++|++|+....    ...+...+.   .+++.|++|.++.  .++|++++++        ++++.
T Consensus       158 ~~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~~~--~g~g~~~~~~--------~~~~~  220 (373)
T cd06453         158 VKEIGEIAHEAGVPVLVDGAQSAGHM----PVDVQDLGC---DFLAFSGHKMLGP--TGIGVLYGKE--------ELLEE  220 (373)
T ss_pred             HHHHHHHHHHcCCEEEEEhhhhcCce----eeeccccCC---CEEEeccccccCC--CCcEEEEEch--------HHhhc
Confidence            56788888899999999999875332    112222232   2666788999765  4589998865        34444


Q ss_pred             HHhhcc---------------------c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          275 MKKYFD---------------------I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       275 ~~~~~~---------------------~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      ++....                     + .++++.....++..+++...+..++...++.+++++++.+.|++++++.++
T Consensus       221 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~  300 (373)
T cd06453         221 MPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVY  300 (373)
T ss_pred             CCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            332210                     0 123444445555555543323446777888889999999999998877743


Q ss_pred             CCC-CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEEee--CChhhHHHHHHHH
Q 014936          333 HKP-EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVTFA--VDPYSLEECLDRI  401 (415)
Q Consensus       333 ~~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~--~~~~~l~~~l~~l  401 (415)
                      ..+ ..+.++++.++.      .+..++.+.+ .++||.+.+|..|.        .+++||++++  +++++++++++.|
T Consensus       301 ~~~~~~~~~~~~~~~~------~~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         301 GDAEDRAGVVSFNLEG------IHPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             CCccccCCeEEEEECC------cCHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence            111 234566666642      2455666655 56799998877542        3579999996  6899999998764

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK07049 methionine gamma-lyase; Validated

Probab=99.97  E-value=1.8e-27  Score=225.27  Aligned_cols=230  Identities=15%  Similarity=0.171  Sum_probs=180.3

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g  145 (415)
                      +.+|+++ ....|++.||++.        ..+++++++||++++..++.+++++||+|+++.|+|+.+...+    ...|
T Consensus        77 y~R~~~P-t~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G  147 (427)
T PRK07049         77 YSRFNHP-NSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG  147 (427)
T ss_pred             ccCCCCc-CHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence            4567764 5689999999997        3567899999999999999999999999999999999987654    4678


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcC-----CCceEEEecCCCCccccCCCHHHHHHHHHHHhh---cCcEEEEccccCC
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLAD-----QNTVALVIINPGNPCGNVYSYQHLQKLAETANK---LKTLVIADEVYGH  217 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~---~~~~li~De~~~~  217 (415)
                      ++++.++.      ..|.+.+++.+.     +++++|++++|+||||.+++.+++.+|++.|..   +++++|+|++|..
T Consensus       148 i~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~  221 (427)
T PRK07049        148 VGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG  221 (427)
T ss_pred             cEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence            88666642      146677766553     478999999999999999999999999998754   6899999999865


Q ss_pred             cccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHH
Q 014936          218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPS  295 (415)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~  295 (415)
                      ....    .++ ..+   ..+++.|+||.++ .+|+|+||+++++        ++++.+..... ...+.++..+.++..
T Consensus       222 ~~~~----~pl-~~g---~divv~S~SK~~gG~~glr~G~vv~~~--------~l~~~l~~~~~~~g~~ls~~~a~l~~r  285 (427)
T PRK07049        222 PVFQ----KPL-EHG---ADLSVYSLTKYVGGHSDLVAGAVLGRK--------ALIRQVRALRSAIGTQLDPHSCWMLGR  285 (427)
T ss_pred             cccC----Ccc-ccC---CCEEEEcCceeecCCCCcEEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence            4321    122 122   3488889999998 5999999999754        57777766533 345678888888888


Q ss_pred             hhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          296 ILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       296 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      .|+.     +..+.++..++++.+.+.|++.|++..+.+|
T Consensus       286 ~L~t-----l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp  320 (427)
T PRK07049        286 SLET-----LVLRMERANRNARAVAEFLRDHPKVEKLHYL  320 (427)
T ss_pred             CCCh-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            8864     5666777799999999999998877655555

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.97  E-value=8.1e-28  Score=219.59  Aligned_cols=329  Identities=17%  Similarity=0.142  Sum_probs=252.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      ++++++||+++|   +.++..+|.++++..+.++..      .-.-++...-+.+|++.+|+|+        ..+..++.
T Consensus        37 ~~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f  105 (388)
T COG0156          37 DGRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLF  105 (388)
T ss_pred             CCceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEE
Confidence            467899999999   778889999999999988752      1123455566789999999998        45677777


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEec
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVII  180 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~  180 (415)
                      +++..++..++.++++++|.|+.+...|.+..+.++..+++++.+.+       .|+++|++.+++      +.+.|+..
T Consensus       106 ~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivte  178 (388)
T COG0156         106 SSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTE  178 (388)
T ss_pred             cccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEe
Confidence            78888889999999999999999999999999999999999999887       378999888865      13444444


Q ss_pred             CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC--CCCCeEEEccCccccCCCCceEEEEE
Q 014936          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG--STVPILTLGSLSKRWIVPGWRLGWFV  258 (415)
Q Consensus       181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~  258 (415)
                      ..-...|.+   .++++|++++++|+.++++||+|+.++++..+......++  ..+..|.++||||+||..|   ||+.
T Consensus       179 gVfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~  252 (388)
T COG0156         179 GVFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIA  252 (388)
T ss_pred             ccccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceee
Confidence            556778888   6689999999999999999999999999866555544443  3344799999999999988   9998


Q ss_pred             eeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          259 TTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ++.        .+++.+.....   ++...+|....++...|+..  .....++++++++...+.+.++.. ++. + .+
T Consensus       253 g~~--------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l--~~~~~~r~~L~~~~~~~~~~~~~~-~~~-~-~~  319 (388)
T COG0156         253 GSA--------ALIDYLRNRARPFIFSTALPPAVAAAALAALRIL--EEGPERRERLQELAAFFRSLLKAL-GLV-L-LP  319 (388)
T ss_pred             CcH--------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhc-CCc-c-CC
Confidence            865        67777766521   23445666556666666542  345678888999999998777666 665 3 56


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSF  404 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~  404 (415)
                      ....++.+.+...     ....++...++++ ||.+.+...+..   ...+|+++  .+++++++.+++.|.+.
T Consensus       320 s~s~I~pv~~gd~-----~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         320 SESPIIPVILGDE-----ERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             CCCCeeeeEeCCH-----HHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence            6666776656432     1356677777666 999988777665   36899999  47899999999988764

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.97  E-value=1.5e-27  Score=225.04  Aligned_cols=338  Identities=12%  Similarity=0.054  Sum_probs=228.6

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-------CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-------~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      ++..||++--.   .. .++++++.+++.+......       ...+.....+.++|+.+|++++        .++++++
T Consensus        17 ~~~~~~~~~~~---~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~   84 (387)
T PRK09331         17 EEEFINLDPIQ---RG-GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVT   84 (387)
T ss_pred             cccccccChhh---cC-CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEe
Confidence            45667775443   22 5678999999999874311       1112223357899999999982        3568899


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-------CceEEEe
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVI  179 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i  179 (415)
                      +|+++++.+++.++.++||+|+++.++|.+....++..|++++.+++..+.++.+|++.+++.+++       ++++|++
T Consensus        85 ~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l  164 (387)
T PRK09331         85 HGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL  164 (387)
T ss_pred             CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence            999999999999999999999999999998888889999999999874334567899999998753       5789999


Q ss_pred             cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      ++|+|++|..   .++++|+++|+++|+++|+|++|+....    +.....++.   .+++.|++|+++ ++.++||+++
T Consensus       165 ~~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~g~~----~~~~~~~g~---D~~~~s~~K~l~-~~~~~G~l~~  233 (387)
T PRK09331        165 THVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTVGRM----PVDGKKLGA---DFIVGSGHKSMA-ASAPSGVLAT  233 (387)
T ss_pred             ECCCCCCccc---ccHHHHHHHHHHcCCEEEEECCcccCCc----CCCHHHcCC---CEEEeeCccccc-CCCCEEEEEE
Confidence            9999999988   5688899999999999999999986332    222223333   378899999975 4558999988


Q ss_pred             eCCCCCCChHHHHHHHHhhcc---------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936          260 TDPCGMFRKPKVVERMKKYFD---------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS  330 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  330 (415)
                      ++        ++++.+.....         ...+..+....++...++.. .+.. +..++..++.+++.+.|++++|++
T Consensus       234 ~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~  303 (387)
T PRK09331        234 TE--------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHV-VERV-KRWDEEVKKARWFVDELEKIEGFK  303 (387)
T ss_pred             CH--------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCEE
Confidence            65        55665543210         11112111222222233211 1222 234555677778999999998887


Q ss_pred             CCCC-CCCceEEEEecCccc---cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHH
Q 014936          331 CPHK-PEGSMAVMLKLNLSL---LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       331 ~~~~-p~~g~~~~~~l~~~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~  405 (415)
                      ++.. +....++.++.+...   .....+..++...| +++||...+..   ....+|+.. +.++++++.+++.|++++
T Consensus       304 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~---~~~i~ri~~~g~t~~di~~l~~aL~~i~  379 (387)
T PRK09331        304 QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKPG---ATKEFKLSTYGLTWEQVEYVADAFKEIA  379 (387)
T ss_pred             EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEccC---CceEEEEEeccCCHHHHHHHHHHHHHHH
Confidence            3311 333445555544100   00011234455555 66799854322   245678877 679999999999999887


Q ss_pred             HHH
Q 014936          406 QRH  408 (415)
Q Consensus       406 ~~~  408 (415)
                      +++
T Consensus       380 ~~~  382 (387)
T PRK09331        380 EKY  382 (387)
T ss_pred             Hhc
Confidence            653

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.97  E-value=2.7e-27  Score=223.71  Aligned_cols=331  Identities=11%  Similarity=0.105  Sum_probs=234.1

Q ss_pred             CCCcHHHHHHHHHHHhcCC-----CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc----
Q 014936           51 FHTTHVATEAVAEALLSEK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS----  121 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~-----~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~----  121 (415)
                      .++++.+++++.+.+....     ...|+. .+...++++++++... .+. .++++|++|+|+++++..++.++.    
T Consensus         9 ~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~-~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~   85 (382)
T TIGR03403         9 TMLDPKVKELMDPFFCDIYGNPNSLHQFGT-ATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEI   85 (382)
T ss_pred             CCCCHHHHHHHHHHHHhcCcCCccccHHHH-HHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhc
Confidence            3457889999988876421     122332 3557888888887742 221 267899999999999999998762    


Q ss_pred             -CC-CCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHH
Q 014936          122 -RP-GANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ  196 (415)
Q Consensus       122 -~~-gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~  196 (415)
                       ++ +++|+++...|+++...   ++..|+++..++.++  ++.+|++.+++.++++++++++++|+||||.++|   ++
T Consensus        86 ~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~  160 (382)
T TIGR03403        86 LKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IK  160 (382)
T ss_pred             ccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HH
Confidence             45 46899998777765443   566899999998753  3468999999999888999999999999999987   56


Q ss_pred             HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH
Q 014936          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK  276 (415)
Q Consensus       197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~  276 (415)
                      +|.++|+++|+++++|++++...    .+..+...+.+   +++.|++|.++.+|  +|++++++...+.  |.+.....
T Consensus       161 ~I~~la~~~g~~~ivD~a~~~g~----~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~vr~~~~~~--p~~~g~~~  229 (382)
T TIGR03403       161 EIGEICKERGVLFHTDAVQAIGK----IPVDVQKAGVD---FLSFSAHKFHGPKG--VGGLYIRKGVELT--PLFHGGEH  229 (382)
T ss_pred             HHHHHHHHcCCEEEEechhhcCC----CccCccccCCC---EEEEcchhhCCCCc--eEEEEECCCCCCC--CcccCCCC
Confidence            77888889999999999987522    22222223332   77789999887778  6888876532111  11110000


Q ss_pred             hhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---CceEEEEecCccccCCC
Q 014936          277 KYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---GSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       277 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~~l~~~~~~~~  353 (415)
                      ......++++...+.++..+++.. .++++...+++++.++++.+.|++++++.++ .+.   .+.++.+.++.     .
T Consensus       230 ~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~  302 (382)
T TIGR03403       230 MGGRRSGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTILISIKG-----V  302 (382)
T ss_pred             CCCcccCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEE-CCCCCCcCCEEEEEeCC-----C
Confidence            011124667888887888887542 3457777889999999999999988888743 332   13455555542     1


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                       +...+... |.++||.++.|..|..                   .+.||+|+.  ++++|++.+++.|++++++++
T Consensus       303 -~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~  377 (382)
T TIGR03403       303 -EGEAMLWD-LNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR  377 (382)
T ss_pred             -CHHHHHHh-hccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence             45566665 4678999998876631                   257999994  689999999999999888754

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.96  E-value=1.9e-27  Score=224.63  Aligned_cols=326  Identities=13%  Similarity=0.133  Sum_probs=226.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC---------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPT---------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS  121 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~---------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~  121 (415)
                      .++++.+.+++.+.+....  .++..         .-..++|+.+++++      ++++++|++|+|++++++.++.++.
T Consensus         9 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~a~~~al~~~~   80 (379)
T TIGR03402         9 TRVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTESDNTAIKSAL   80 (379)
T ss_pred             CCCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHH
Confidence            3557889999988875321  22211         12456677777777      4578899999999999999998764


Q ss_pred             ---CCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936          122 ---RPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (415)
Q Consensus       122 ---~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  195 (415)
                         .+|+.|+++..+|+++..   .+...|.++..++.+.  ++.+|++++++.++++++++++++++||||.++|   +
T Consensus        81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~  155 (379)
T TIGR03402        81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP---I  155 (379)
T ss_pred             HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---H
Confidence               456899999988887543   3345799999988743  3468999999999989999999999999999977   4


Q ss_pred             HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH
Q 014936          196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM  275 (415)
Q Consensus       196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~  275 (415)
                      ++|.++|+++|+++++|++++.    +..+..+...+.+   +++.|.+|.++.+|  +|+++.++....  .|.+....
T Consensus       156 ~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~v~~~~~~--~p~~~g~~  224 (379)
T TIGR03402       156 EEIGEIAKERGALFHTDAVQAV----GKIPIDLKEMNID---MLSLSGHKLHGPKG--VGALYIRKGTRF--RPLLRGGH  224 (379)
T ss_pred             HHHHHHHHHcCCEEEEECcccc----cccccCcccCCCC---EEEEcHHHcCCCCc--eEEEEECCCCCC--CCcccCCc
Confidence            6788889999999999999986    3333333333333   67778889776667  888877643211  11111100


Q ss_pred             HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCC---C-ceEEEEecCcccc
Q 014936          276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPE---G-SMAVMLKLNLSLL  350 (415)
Q Consensus       276 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~---~-g~~~~~~l~~~~~  350 (415)
                      .......++++.....++.++++.. .++++...++.+++++.+.+.|.+ ++++.....+.   . ...+|+  +.   
T Consensus       225 ~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~---  298 (379)
T TIGR03402       225 QERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EY---  298 (379)
T ss_pred             cCCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cC---
Confidence            0111123556666666666666542 246777778899999999999985 77776332221   1 222333  21   


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                         .+..++... |.++||.+.+|..|..                   .+.+|+|++  ++++|++++++.|++++++++
T Consensus       299 ---~~~~~~~~~-l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~  374 (379)
T TIGR03402       299 ---IEGEAILLL-LDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR  374 (379)
T ss_pred             ---CCHHHHHHh-hccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence               145566554 4778999999987643                   268999995  689999999999999988755


Q ss_pred             H
Q 014936          410 K  410 (415)
Q Consensus       410 ~  410 (415)
                      +
T Consensus       375 ~  375 (379)
T TIGR03402       375 A  375 (379)
T ss_pred             h
Confidence            3

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.96  E-value=1.6e-27  Score=225.15  Aligned_cols=327  Identities=14%  Similarity=0.107  Sum_probs=227.2

Q ss_pred             CCCcHHHHHHHHHHHhcCC----CCCCCC----CCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHHHHHHHHHhc
Q 014936           51 FHTTHVATEAVAEALLSEK----FNGYAP----TAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLS  121 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~----~~~y~~----~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~al~~~~~~l~  121 (415)
                      +++++.+.+++.+.++...    ...|+.    ..+..++|+.++++++      ++ .++|++++|+++++..++.++.
T Consensus        10 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~   83 (376)
T TIGR01977        10 YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFN------APSSAHVVFTNNATTALNIALKGLL   83 (376)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhC------cCCCCeEEEeCCHHHHHHHHHHhcc
Confidence            5677899999988876422    112322    1456788999999883      33 3589999999999999999998


Q ss_pred             CCCCEEEEcCCCCcchHH----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHH
Q 014936          122 RPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK  197 (415)
Q Consensus       122 ~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~  197 (415)
                      ++||+|+++.++|+++..    .++..|.+++.++.+.  ++.+|+++++++++++++++++++|+||||.+++   +++
T Consensus        84 ~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~~~  158 (376)
T TIGR01977        84 KEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVTGTILP---IEE  158 (376)
T ss_pred             CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC---HHH
Confidence            999999999999987643    4556699999888753  4568999999999888999999999999999987   567


Q ss_pred             HHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH-------
Q 014936          198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK-------  270 (415)
Q Consensus       198 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~-------  270 (415)
                      |.++|+++|+++|+|++++.+..    ...+...+.+   +++.|++|+++.|. ..|+++.++......-..       
T Consensus       159 i~~l~~~~~~~livD~a~~~g~~----~~~~~~~~~D---~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~  230 (376)
T TIGR01977       159 IGELAQENGIFFILDAAQTAGVI----PIDMTELAID---MLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHS  230 (376)
T ss_pred             HHHHHHHcCCEEEEEhhhccCcc----CCCchhcCCC---EEEecccccccCCC-CceEEEEcCCcCcCceecCCCcccc
Confidence            78888999999999999987442    2222222332   77889999865432 267776655321100000       


Q ss_pred             -HHHHHHh--hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----CceEEEE
Q 014936          271 -VVERMKK--YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GSMAVML  343 (415)
Q Consensus       271 -~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~  343 (415)
                       .......  .....++++.....++.++++...+...+...++.+++.+++.+.|.+++++..+ .|.    .+..+++
T Consensus       231 ~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~v~~  309 (376)
T TIGR01977       231 ALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIY-GPADPANRVGVVSF  309 (376)
T ss_pred             ccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCccccCCeEEE
Confidence             0000000  0011234555556666666654333456677888899999999999988777743 321    2445666


Q ss_pred             ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----------CCCeEEEEee--CChhhHHHHHHHHHH
Q 014936          344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----------LKNWLRVTFA--VDPYSLEECLDRIKS  403 (415)
Q Consensus       344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------~~~~iRi~~~--~~~~~l~~~l~~l~~  403 (415)
                      .++.      .+..++...+.+++||.+.+|..|.          ..+.||+++.  .++++++.+++.|++
T Consensus       310 ~~~~------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       310 TVEG------IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             EECC------CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            6642      2456666666555599999887653          2478999994  689999999999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.96  E-value=3.3e-27  Score=223.45  Aligned_cols=325  Identities=14%  Similarity=0.094  Sum_probs=238.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~  130 (415)
                      ...++++++++.....     .|.. .+..++++.+.+.+++.+|.. ..+.+++++++++++..++..+.++||+|+++
T Consensus        18 ~~~~~~V~~a~~~~~~-----~~~~-~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~   90 (401)
T PLN02409         18 VNIPERVLRAMNRPNE-----DHRS-PAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSF   90 (401)
T ss_pred             CCCCHHHHHHhcCCCC-----CCCC-HHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEe
Confidence            3456778777755332     2222 356778888888887777743 23467889999999999999999999999999


Q ss_pred             CCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          131 RPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       131 ~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      ++.|++.  ...++..|++++.++.+.+  ..++++++++.+++    +++++++++++||||.++|.+++.++++ |++
T Consensus        91 ~~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~  167 (401)
T PLN02409         91 RIGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQ  167 (401)
T ss_pred             CCCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhc
Confidence            9999765  4667888999999987543  34789999999875    6899999999999999998777777766 999


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-----
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-----  279 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----  279 (415)
                      +|+++++|++++.    +..+..+..++.+   +++.|.+|++++|. ++||++.++        +.++++....     
T Consensus       168 ~g~~~vvD~v~s~----g~~~id~~~~~~D---~~~~s~~K~l~~P~-G~G~l~~~~--------~~~~~~~~~~~~~~~  231 (401)
T PLN02409        168 HPALLLVDGVSSI----GALDFRMDEWGVD---VALTGSQKALSLPT-GLGIVCASP--------KALEASKTAKSPRVF  231 (401)
T ss_pred             cCcEEEEEccccc----CCccccccccCcc---EEEEcCccccCcCC-CcceeEECH--------HHHHHHhcCCCCCee
Confidence            9999999999985    2222233333333   66777799975533 599999865        3444443210     


Q ss_pred             -------------cc-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----CceEE
Q 014936          280 -------------DI-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GSMAV  341 (415)
Q Consensus       280 -------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~  341 (415)
                                   .. ..+++...+.++.++++...+..+++..++++++++++.+.|+.+ +++++ .+.    .+...
T Consensus       232 ~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~-~~~~~~~s~~v~  309 (401)
T PLN02409        232 FDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLC-TKKPEWRSDTVT  309 (401)
T ss_pred             cCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhcccceE
Confidence                         01 235666667777777765445668888999999999999999887 77744 332    22345


Q ss_pred             EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHHHHH
Q 014936          342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ++.++..     .+..++...+++++||.+.+|........|||+. + .+.+++..++..|++++.+.
T Consensus       310 ~~~~p~~-----~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~  373 (401)
T PLN02409        310 AVVVPEG-----IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV  373 (401)
T ss_pred             EEeCCCC-----CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence            5666532     2566777888888999999887654468999999 3 58899999999999988764

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.96  E-value=3.8e-27  Score=222.31  Aligned_cols=335  Identities=17%  Similarity=0.160  Sum_probs=230.0

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++||..|......+. .+|.+.+++.++++....  .+. ....++++.+++++.+..+    .+.+++++++++
T Consensus        26 ~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~   97 (377)
T PRK02936         26 NNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIWH--VSN-LFTNSLQEEVASLLAENSA----GDLVFFCNSGAE   97 (377)
T ss_pred             CCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhccc--ccc-ccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHH
Confidence            35889999999974433333 679999999999875321  222 3456899999999976332    358999999999


Q ss_pred             HHHHHHHHhc-CCC-CEEEEcCCCCcchHHHH-HhCCCeEE---EeeccCCCCC--CCChhHHHhhcCCCceEEEecCCC
Q 014936          112 AIDVAMALLS-RPG-ANILLPRPGFPIYELSA-AFRHIEVR---HFDLLPDKGW--EVDLDDIESLADQNTVALVIINPG  183 (415)
Q Consensus       112 al~~~~~~l~-~~g-d~vi~~~p~y~~~~~~~-~~~g~~~~---~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~i~~p~  183 (415)
                      ++..+++... .+| +.|++.+++|++..... ...+....   ..+..++..+  ..|++.+++.+.++++++++..++
T Consensus        98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~  177 (377)
T PRK02936         98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQ  177 (377)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEeccc
Confidence            9999998643 234 57999999888644332 22221110   0111000000  027899999998788888887778


Q ss_pred             CccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936          184 NPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (415)
Q Consensus       184 nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  262 (415)
                      +++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+... .+..++....+   .++||.++ +|+|+||+++++ 
T Consensus       178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~~-  251 (377)
T PRK02936        178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGKK-  251 (377)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEcH-
Confidence            888876 588999999999999999999999998876665422 22223222223   37899987 899999999865 


Q ss_pred             CCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----CCCCcCCCCCCC
Q 014936          263 CGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----IPCISCPHKPEG  337 (415)
Q Consensus       263 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~  337 (415)
                             ++.+.+.... ..+.+.+++.|.++.++|+...   .++..++++++.+++.+.|++    ++.+. . ....
T Consensus       252 -------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-v~~~  319 (377)
T PRK02936        252 -------ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVK-N-IRGK  319 (377)
T ss_pred             -------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEE-e-Eeec
Confidence                   5777765432 2345679999999999986531   123445666666666666654    33322 1 2345


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF  404 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~  404 (415)
                      |+++|+.++.       +...+.. .+.++||.+.|+.    .+++|+++  ..+++++++++++|.++
T Consensus       320 g~~~~i~~~~-------~~~~~~~-~l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~  376 (377)
T PRK02936        320 GLMIGIECTE-------EVAPVIE-QLREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKV  376 (377)
T ss_pred             ceEEEEEecc-------hHHHHHH-HHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHh
Confidence            7889998863       2344444 5577899998853    47999996  57899999999999875

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.96  E-value=4.3e-28  Score=213.18  Aligned_cols=366  Identities=19%  Similarity=0.272  Sum_probs=221.3

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHH--H-hcCCCCCC-CCCCCcHHHHHHHHHHHh
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEA--L-LSEKFNGY-APTAGLPLTRRAIAEYLS   91 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~--~-~~~~~~~y-~~~~g~~~lr~~ia~~~~   91 (415)
                      .+.+...++.++|+.-+...=-+||+-|.|+... +.....+.......  . ...+.-+| +...|++++|+.+|+.+ 
T Consensus         5 eL~~~~~~l~~~y~~~ka~~L~LdmtRGKPs~eQ-LdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r~l~a~ll-   82 (425)
T PF12897_consen    5 ELAALLAELRKQYEELKAKGLKLDMTRGKPSPEQ-LDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEARELFAELL-   82 (425)
T ss_dssp             -HHHCHHHHHHHHHHHHHTT--EES---S--HHH-HHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcccCCCCCCHHH-HhhhHHHhcCCCCccccCCCccccCCCCccCChHHHHHHHHHHh-
Confidence            3444445555555433445556899999875221 11111121111110  0 01134589 88899999999999999 


Q ss_pred             hhCCCCCCCCcEEEeCChHHHHHHHH--HHh----cC--------CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC
Q 014936           92 RDLPYKLTPNDVFVTSGCTQAIDVAM--ALL----SR--------PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (415)
Q Consensus        92 ~~~~~~~~~~~i~i~~g~~~al~~~~--~~l----~~--------~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~  157 (415)
                           ++++++|++..+++-.++--.  .++    .+        +.-+.+++.|+|..++..++.+|++.+.||..++ 
T Consensus        83 -----gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~VpM~~d-  156 (425)
T PF12897_consen   83 -----GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIPVPMTED-  156 (425)
T ss_dssp             -----TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEEEEEETT-
T ss_pred             -----CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEecCCCCC-
Confidence                 789999999888765543222  221    11        1237899999999999999999999999998643 


Q ss_pred             CCCCChhHHHhhcCC-CceEEEecCC--CCccccCCCHHHHHHHHHH-HhhcCcEEEEccccCCcccCCC-Cccc---c-
Q 014936          158 GWEVDLDDIESLADQ-NTVALVIINP--GNPCGNVYSYQHLQKLAET-ANKLKTLVIADEVYGHLVFGDK-PFVP---M-  228 (415)
Q Consensus       158 ~~~~~~~~l~~~~~~-~~~~v~i~~p--~nptG~~~~~~~l~~i~~~-~~~~~~~li~De~~~~~~~~~~-~~~~---~-  228 (415)
                        ++|++.+++++.+ .....++|.|  +||||+++|.+..++++++ +...+..|+.|++|....+.+. ....   + 
T Consensus       157 --GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil  234 (425)
T PF12897_consen  157 --GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNIL  234 (425)
T ss_dssp             --EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HH
T ss_pred             --CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHH
Confidence              5899999998843 3445577777  8999999999999999998 3467999999999998776322 2111   1 


Q ss_pred             ---cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCc---
Q 014936          229 ---GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPD---  301 (415)
Q Consensus       229 ---~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~---  301 (415)
                         ...+..++++.+.|+||. ..+|-.++++.++.        +-++.+... ...+.++..+.|..-.+++.+..   
T Consensus       235 ~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv  305 (425)
T PF12897_consen  235 DACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGV  305 (425)
T ss_dssp             HHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHHH-S---HHHHHHHHHHHHSHHTHH
T ss_pred             HHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcCceeCccHHHHHHHHHHhcChhhHH
Confidence               223556789999999999 89999999999975        455555554 34467889999999999998743   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhc-CC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-CCC
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKE-IP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-GTA  376 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~-~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~  376 (415)
                      ..+++++.+.++-+.+...+.|++ +.   ++..+..|.+|+|++++...       .....+.+++++.||.+.| |..
T Consensus       306 ~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-------G~AkrvV~lakeAGV~LT~AGAt  378 (425)
T PF12897_consen  306 RAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-------GTAKRVVELAKEAGVALTPAGAT  378 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-------T-HHHHHHHHHHTTEE---TTTT
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-------ChHHHHHHHHHHhCceeCCCCCC
Confidence            467777888888777777777764 43   45447799999999998864       2344556677999999998 555


Q ss_pred             CCC-----CCeEEEEeeC-ChhhHHHHHHHHHHHHHH
Q 014936          377 VGL-----KNWLRVTFAV-DPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       377 ~~~-----~~~iRi~~~~-~~~~l~~~l~~l~~~~~~  407 (415)
                      |-.     +..|||+.+. +.++++.+++.+.-.++-
T Consensus       379 fPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~l  415 (425)
T PF12897_consen  379 FPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKL  415 (425)
T ss_dssp             SGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence            532     5789999986 569999999999877664

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.96  E-value=5.6e-27  Score=219.86  Aligned_cols=317  Identities=15%  Similarity=0.147  Sum_probs=220.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC--cEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGANIL  128 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~i~~g~~~al~~~~~~l~~~gd~vi  128 (415)
                      ..+++.+++++...... ....|.  .-..++|+.+++++      +++++  .|++++|+++++..++.++..+||+++
T Consensus         8 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~------~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi   78 (355)
T TIGR03301         8 LSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALA------GGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLL   78 (355)
T ss_pred             CCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHh------cCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEE
Confidence            45678888888773321 111233  23567777787777      33443  678899999999999999998888877


Q ss_pred             EcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       129 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +..+.+++  +...++..|.++..++.+.  ++.+|++++++.+++  +.+.+++++++||||...+   +++|+++|++
T Consensus        79 ~~~~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~  153 (355)
T TIGR03301        79 VLINGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARS  153 (355)
T ss_pred             EECCCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHH
Confidence            66665544  4566788999999888643  456899999998864  4567778899999999954   7889999999


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhh-----
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-----  278 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-----  278 (415)
                      +|+++|+|++++.+.    ...++..++.   .++++|++|++ +++|  +||+++++        ++++.+...     
T Consensus       154 ~~~~livD~~~s~g~----~~~~~~~~~~---d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~  216 (355)
T TIGR03301       154 HGAVLIVDAMSSFGA----IPIDIEELDV---DALIASANKCLEGVPG--FGFVIARR--------DLLEASAGNARSLY  216 (355)
T ss_pred             cCCEEEEEeccccCC----cccchhhcCc---cEEEecCCcccccCCc--eeEEEECH--------HHHHHhhCCCCCce
Confidence            999999999887632    2223333332   37889999985 4556  79999865        455554411     


Q ss_pred             -------------ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC--CCceEEE
Q 014936          279 -------------FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP--EGSMAVM  342 (415)
Q Consensus       279 -------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~  342 (415)
                                   ....++++...+.++..+++...++ ++++..++++++++++.+.|+++ ++.++..+  .++.++|
T Consensus       217 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~  295 (355)
T TIGR03301       217 LDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVS  295 (355)
T ss_pred             eeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEE
Confidence                         0112356667777766666543223 36778889999999999999887 66633222  2355677


Q ss_pred             EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      +.++...  . .+..++... +.++||.+.+|..+.. +++||++.  .++++++.+++.|+++
T Consensus       296 ~~~~~~~--~-~~~~~~~~~-l~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~  354 (355)
T TIGR03301       296 FLYPDDP--D-FDFDDFYQE-LKERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA  354 (355)
T ss_pred             EECCCCC--c-chHHHHHHH-HHHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence            7776311  0 123455555 4677999999875543 79999983  5899999999999865

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.96  E-value=6.4e-27  Score=222.11  Aligned_cols=336  Identities=18%  Similarity=0.167  Sum_probs=225.0

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++||..|.-....+. .+|.+.+++.+.+++... .......-..++.+.++++.        ..+.++++++|+
T Consensus        37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~sGs  107 (403)
T PRK05093         37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT--------FAERVFFANSGA  107 (403)
T ss_pred             CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC--------CCCEEEEeCchH
Confidence            34778999977732222233 689999999998875221 11111111234455555442        246999999999


Q ss_pred             HHHHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCCChhHHHhh
Q 014936          111 QAIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus       111 ~al~~~~~~l~~-------~-gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      +|+..+++....       . .+.|+..+.+|++....+...+.             ++..++.       .|++.+++.
T Consensus       108 eA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  180 (403)
T PRK05093        108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAV  180 (403)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHH
Confidence            999999987521       1 25788888888875543322111             1111111       278999998


Q ss_pred             cCCCceEEEecCCCCccccCC--CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936          170 ADQNTVALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW  247 (415)
Q Consensus       170 ~~~~~~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (415)
                      +.+++++|++. |.||+|-++  +.+.+++|+++|++||+++|+||+|.++.+.|... +....+....   +.||||.+
T Consensus       181 l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l  255 (403)
T PRK05093        181 IDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKAL  255 (403)
T ss_pred             hcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEecccc
Confidence            87666655555 888887664  88999999999999999999999999877766532 2222222212   45899997


Q ss_pred             CCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      + +|+|+||+++++        ++++.+... ...+.+.+++.|.++.+.|+...   -.+..++++++++++.+.|+++
T Consensus       256 ~-~G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~~  323 (403)
T PRK05093        256 G-GGFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN---TPEVLEGVKARRQRFVDGLQKI  323 (403)
T ss_pred             c-CCcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHH
Confidence            6 899999999976        677777653 33355678899998888775421   2345678888888888888875


Q ss_pred             C-CCcC-CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936          327 P-CISC-PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK  402 (415)
Q Consensus       327 ~-~~~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~  402 (415)
                      . .... ...+..|.++|+.++...   .....+++..++ ++||.+.|+.    .+++|+++  ..+++++++++++|.
T Consensus       324 ~~~~~~~~~~~~~G~~~~~~l~~~~---~~~~~~~~~~l~-~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~  395 (403)
T PRK05093        324 NQKYGVFSEIRGMGLLIGAELKPQY---KGRARDFLNAAA-EEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFE  395 (403)
T ss_pred             HhhCCCeEeEeeCceEEEEEecCcc---hhHHHHHHHHHH-HCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence            1 1111 124567889998885310   013456777665 4699998753    47899976  458999999999999


Q ss_pred             HHHHHH
Q 014936          403 SFYQRH  408 (415)
Q Consensus       403 ~~~~~~  408 (415)
                      +++.++
T Consensus       396 ~~l~~~  401 (403)
T PRK05093        396 KAVAKV  401 (403)
T ss_pred             HHHHHh
Confidence            988653

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.96  E-value=6.6e-27  Score=221.53  Aligned_cols=327  Identities=16%  Similarity=0.136  Sum_probs=223.9

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +|+.++||..|.-...  ++ .+|.+.+++.++++..... .+.......+|.++++++.        ..+.++++++|+
T Consensus        38 ~G~~~lD~~~g~~~~~--lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs  107 (396)
T PRK04073         38 EGNRYMDMLSAYSAVN--QGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNTGA  107 (396)
T ss_pred             CCCEEEEcCCCHHhcc--CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCChH
Confidence            4788999977753211  22 5799999999988753221 1111122345555555543        246999999999


Q ss_pred             HHHHHHHHHhcC---------CC-CEEEEcCCCCcchHHHHHh-CCCe------------EEEeeccCCCCCCCChhHHH
Q 014936          111 QAIDVAMALLSR---------PG-ANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDKGWEVDLDDIE  167 (415)
Q Consensus       111 ~al~~~~~~l~~---------~g-d~vi~~~p~y~~~~~~~~~-~g~~------------~~~~~~~~~~~~~~~~~~l~  167 (415)
                      +|+..+++....         +| ++|+...-+|++....+.. .+..            +..++.       .|++.++
T Consensus       108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~  180 (396)
T PRK04073        108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALK  180 (396)
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHH
Confidence            999999998631         34 6788888888875544322 2211            111111       2789999


Q ss_pred             hhcCCCceEEEecCCCCccccCCCH-HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccc
Q 014936          168 SLADQNTVALVIINPGNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR  246 (415)
Q Consensus       168 ~~~~~~~~~v~i~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  246 (415)
                      +.++++++++++..++||+|.+++. +.+++|.++|+++|+++|+||+|.++...+.... ....+...+   +.++||.
T Consensus       181 ~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pd---i~~~sK~  256 (396)
T PRK04073        181 AAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPD---MYILGKA  256 (396)
T ss_pred             HhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCC---EEEeccc
Confidence            9888788877887889999999765 4699999999999999999999998765543221 111222222   3357999


Q ss_pred             cCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936          247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       247 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                      ++++|+|+||+++++        ++.+.+... ...+++.+++.+.++.+.|+...+   +...++.+++++++.+.|++
T Consensus       257 lg~gg~~ig~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~---~~l~~~~~~~~~~l~~~L~~  325 (396)
T PRK04073        257 LGGGVFPISCVAANR--------DILGVFTPGSHGSTFGGNPLACAVSIAALEVLEE---EKLPERSLELGEYFKEQLKE  325 (396)
T ss_pred             ccCCCCcceEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHh
Confidence            999999999999865        677777543 233566788999999888864211   23446667778888888887


Q ss_pred             C--CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHH
Q 014936          326 I--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRI  401 (415)
Q Consensus       326 ~--~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l  401 (415)
                      +  +.+. . .+..|++++++++.       +..++...+ .++||.+.+..    .++|||++  ..+++++++++++|
T Consensus       326 l~~~~i~-~-~~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l  391 (396)
T PRK04073        326 IDNPMIK-E-VRGRGLFIGVELNE-------PARPYCEAL-KEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKI  391 (396)
T ss_pred             hcCCccc-c-eecceEEEEEEecc-------hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHH
Confidence            5  2233 2 24457788887752       355666665 56799997632    47899996  57999999999999


Q ss_pred             HHHH
Q 014936          402 KSFY  405 (415)
Q Consensus       402 ~~~~  405 (415)
                      ++++
T Consensus       392 ~~~l  395 (396)
T PRK04073        392 KAVL  395 (396)
T ss_pred             HHHh
Confidence            8764

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.96  E-value=3.1e-27  Score=226.07  Aligned_cols=345  Identities=18%  Similarity=0.163  Sum_probs=228.0

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +|+.++||..|.....  ++ .+|.+.+++.+.+...  ..|+...+..++...+++.+.+..+  ...+++++++|+++
T Consensus        34 dG~~~id~~~~~~~~~--lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgse  107 (413)
T cd00610          34 DGNRYLDFLSGIGVLN--LGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTE  107 (413)
T ss_pred             CCCEEEEcCccHHhhc--cCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence            5889999998753222  33 6899999999988643  2444332334555555555554443  36789999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCC-------------CeEEEeeccCC----CCCCCChhHHHhhcCC
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRH-------------IEVRHFDLLPD----KGWEVDLDDIESLADQ  172 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~~~~~l~~~~~~  172 (415)
                      ++..+++.+.  .+++.|++.+++|++........+             .++..++.+..    ..+..|++.|++.+++
T Consensus       108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  187 (413)
T cd00610         108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE  187 (413)
T ss_pred             HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc
Confidence            9999999874  568999999999998665443322             23445554311    1233488899988876


Q ss_pred             --CceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936          173 --NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI  248 (415)
Q Consensus       173 --~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  248 (415)
                        ....+++++| ++++|..+ +.+.+++|.++|+++|+++|+||+|.++...+... .....+...   .+.|+||.++
T Consensus       188 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~---d~~t~sK~l~  263 (413)
T cd00610         188 HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEP---DIVTLGKGLG  263 (413)
T ss_pred             CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCC---CeEEEccccc
Confidence              3445566666 56779876 67779999999999999999999999764443321 111122221   2348899976


Q ss_pred             CCCceEEEEEeeCCCCCCChHHHHHHH--Hhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936          249 VPGWRLGWFVTTDPCGMFRKPKVVERM--KKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                      . |+|+||+++++        ++++.+  .... ..+.+.+++.+.++.+.|+...+   ++..++++++.+++.+.|+.
T Consensus       264 ~-g~~~g~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~  331 (413)
T cd00610         264 G-GLPLGAVLGRE--------EIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRE  331 (413)
T ss_pred             C-ccccEEEEEcH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence            5 79999999864        577765  2222 23456788888888777754211   34567777777777777775


Q ss_pred             CCC-CcC-CCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHH
Q 014936          326 IPC-ISC-PHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECL  398 (415)
Q Consensus       326 ~~~-~~~-~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l  398 (415)
                      +.. ... ...+..|.++++.++....   .+......+...+ .++||.+.|+.    .+.+|++++  .+++++++++
T Consensus       332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~  406 (413)
T cd00610         332 LAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSG----GNVIRLLPPLIITEEEIDEGL  406 (413)
T ss_pred             HHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHH
Confidence            411 111 1123457788887754210   0001234555554 56799999975    478999884  5889999999


Q ss_pred             HHHHHH
Q 014936          399 DRIKSF  404 (415)
Q Consensus       399 ~~l~~~  404 (415)
                      ++|.++
T Consensus       407 ~~l~~~  412 (413)
T cd00610         407 DALDEA  412 (413)
T ss_pred             HHHHHh
Confidence            999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.96  E-value=9.1e-27  Score=221.68  Aligned_cols=330  Identities=17%  Similarity=0.192  Sum_probs=223.3

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      +.++++++.|+|+    +++++.+.++..+. .  ....|.+     ..|.+++++++++++.+.+|.  +.++++++++
T Consensus        19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~   89 (398)
T cd00613          19 DQSMSFLGSGTYK----HNPPAVIKRNILEN-E--FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE   89 (398)
T ss_pred             ccCcccccccccC----CcCcHHHHHHhccc-c--CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence            5567999999975    55667666656555 2  2234554     678999999999999988774  4446766665


Q ss_pred             hH-HHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhCC----CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC
Q 014936          109 CT-QAIDVAMALLSRP--GANILLPRPGFPIYELSAAFRH----IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN  181 (415)
Q Consensus       109 ~~-~al~~~~~~l~~~--gd~vi~~~p~y~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~  181 (415)
                      ++ ++...+..++..+  ||+|++++|.|+.+...+...|    .+++.+++++  ++.+|++++++.+.+++++|++++
T Consensus        90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~  167 (398)
T cd00613          90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQY  167 (398)
T ss_pred             hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEEC
Confidence            55 4555555555565  9999999999999888877776    8888888743  346899999999988899999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC----CceEEEE
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWF  257 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~  257 (415)
                      |+ |+|.+.  +.+++|+++|+++|+++|+|+++..+...    .....++   ..++++|+||++ +|    |+++||+
T Consensus       168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~----~~~~~~~---~d~~~~s~~K~~-~p~g~Ggp~~g~l  236 (398)
T cd00613         168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGL----KPPGEYG---ADIVVGNLQKTG-VPHGGGGPGAGFF  236 (398)
T ss_pred             CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCC----CChHHcC---CCEEEeeccccC-CCCCCCCCceeEE
Confidence            85 899983  45799999999999999999988653311    1111222   238889999997 55    7899999


Q ss_pred             EeeCCCCCCChHHHHHHHHh------------------------------hccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936          258 VTTDPCGMFRKPKVVERMKK------------------------------YFDILGDPATFIQAAVPSILQQPDEVFFKK  307 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  307 (415)
                      +.++        ++.+.+..                              ......+.++....++...+....+..+++
T Consensus       237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~  308 (398)
T cd00613         237 AVKK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKE  308 (398)
T ss_pred             EEhh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHH
Confidence            9864        23333210                              000012222333333333333334467888


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE--EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEE
Q 014936          308 TLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRV  385 (415)
Q Consensus       308 ~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~--~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi  385 (415)
                      ..++++++++++.+.|+++++..   .+.+..+  ++++++...  + .+..++...| .++||.+.... ....+.+|+
T Consensus       309 ~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~~v~~~~~~~~--~-~~~~~~~~~L-~~~gi~~~~~~-~~~~~~lRi  380 (398)
T cd00613         309 IAERAHLNANYLAKRLKEVGGVL---PFNGPFFHEFVLRLPPLY--G-IRAEDLAKAL-IDGGFHAPTMY-LPVDGTLMI  380 (398)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcc---cCCCCeeEEEEEEcCCcc--h-HHHHHHHHhh-hhcCccccccc-cCCCCeEEE
Confidence            89999999999999999885443   2323322  455554210  0 1345666666 46698864421 122578999


Q ss_pred             Eee--CChhhHHHHHHHH
Q 014936          386 TFA--VDPYSLEECLDRI  401 (415)
Q Consensus       386 ~~~--~~~~~l~~~l~~l  401 (415)
                      ++.  ++++|++.+++.|
T Consensus       381 s~~~~~t~edid~~~~~L  398 (398)
T cd00613         381 EPTETETKEELDALLEAL  398 (398)
T ss_pred             EcCCCCCHHHHHHHHHhC
Confidence            994  6899999998764

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.96  E-value=2e-26  Score=217.08  Aligned_cols=289  Identities=13%  Similarity=0.155  Sum_probs=203.6

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~  147 (415)
                      +|++ .+..+|++.+|++++        .++.++++||++++..++.+++++||+|+++.|.|..+...    ++..|++
T Consensus        60 r~~~-p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~  130 (400)
T PRK06234         60 RLGN-PTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVE  130 (400)
T ss_pred             CCCC-ccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeE
Confidence            3444 578999999999983        35788999999999999999999999999999999875543    4668999


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc--CcEEEEccccCCcccCCCCc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~  225 (415)
                      +..++.       .|++++++++++++++|++++|+||||.+.+   +++|+++|+++  |+++|+|++|+.+.+.    
T Consensus       131 v~~vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~----  196 (400)
T PRK06234        131 VTFVDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ----  196 (400)
T ss_pred             EEEECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC----
Confidence            888864       2789999999889999999999999999965   77777778786  9999999999875532    


Q ss_pred             ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhh--c-cccCCchhHHHHHHHHhhCCCc
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKY--F-DILGDPATFIQAAVPSILQQPD  301 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~a~~~~l~~~~  301 (415)
                      .++ ..+   ..+++.|+||.++++|.++ ||+++++        ++++.++..  . ..+...++.....+...|+.  
T Consensus       197 ~~l-~~g---~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t--  262 (400)
T PRK06234        197 RPL-QLG---ADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT--  262 (400)
T ss_pred             Cch-hhC---CcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc--
Confidence            122 122   2388999999999889875 8888764        566666542  1 22345566666666666654  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHh
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAK  365 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~  365 (415)
                         +..+.++.+++...+.+.|+..|.+..+.+|.                .|..+.++++..    .....+|+..+ +
T Consensus       263 ---l~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~----~~~~~~f~~~l-~  334 (400)
T PRK06234        263 ---LQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG----VEEGKVVMNNV-K  334 (400)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc----HHHHHHHHHhC-C
Confidence               55667777788888888888776554333442                234555666421    11223444443 4


Q ss_pred             hcCeEEEcCCCCCC-----------------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          366 EESVIILPGTAVGL-----------------------KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       366 ~~gi~v~~g~~~~~-----------------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      -.++..+-|.....                       ++.||+|++..  +.+.+++.|+++++.
T Consensus       335 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~~  397 (400)
T PRK06234        335 LATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLE--DVDDIIADLKQALDL  397 (400)
T ss_pred             cceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCC--CHHHHHHHHHHHHHH
Confidence            44555544533210                       35799999874  455666666666654

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.96  E-value=3e-26  Score=215.61  Aligned_cols=338  Identities=14%  Similarity=0.113  Sum_probs=221.5

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHhc-------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLS-------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +||++++   +.++..+|+++++..++++.       ... .|+...++.+|++.+|++++       ..+.+++++|.+
T Consensus         1 ~~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~-~yg~~~~~~~LE~~lA~~~g-------~e~al~~~sG~~   69 (392)
T PLN03227          1 LNFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRG-FYGTIDAHLELEQCMAEFLG-------TESAILYSDGAS   69 (392)
T ss_pred             CCCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCccccc-ccCChHHHHHHHHHHHHHhC-------CCcEEEecCcHH
Confidence            4677776   56678899999999998875       232 47766788999999999983       235566666655


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-----------CCceEEEe
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-----------QNTVALVI  179 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~v~i  179 (415)
                      +.. .++.++.++||.|+++++.|.++...+...+.++..+++...    -+++.+.+.+.           ++++.|++
T Consensus        70 a~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~  144 (392)
T PLN03227         70 TTS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVV  144 (392)
T ss_pred             HHH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEE
Confidence            555 777788999999999999999998888777888877765311    13344333332           35777888


Q ss_pred             cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc--cCC-CCCeEEEccCccccCCCCceEEE
Q 014936          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FGS-TVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~-~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      ..++||+|.+.+   +++++++|++||+++|+||+|+....+..+......  +.+ .+..+++.|+||.++..   .|+
T Consensus       145 E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~  218 (392)
T PLN03227        145 EGLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGM  218 (392)
T ss_pred             cCCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcE
Confidence            888999999977   778889999999999999999844333221111221  111 22358888999987544   488


Q ss_pred             EEeeCCCCCCChHHHHHHHHhhc-c--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936          257 FVTTDPCGMFRKPKVVERMKKYF-D--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH  333 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  333 (415)
                      +++++        ++++.++... .  ++...++..+.++...+....  ..+++.++++++.+++.+.|++. ++..+.
T Consensus       219 v~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~--~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~  287 (392)
T PLN03227        219 TVGSE--------EVVDHQRLSGSGYCFSASAPPFLAKADATATAGEL--AGPQLLNRLHDSIANLYSTLTNS-SHPYAL  287 (392)
T ss_pred             EecCH--------HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHhc-CCcccc
Confidence            87754        5666554331 1  222334656666655553311  13466778888888999988752 221110


Q ss_pred             ---------CCCCceEEEEecCccccCC-CC---CHHHHHHHHHhhcCeEEEcCC-------CCCCCCeEEEEe--eCCh
Q 014936          334 ---------KPEGSMAVMLKLNLSLLDD-II---DDIDFCFKLAKEESVIILPGT-------AVGLKNWLRVTF--AVDP  391 (415)
Q Consensus       334 ---------~p~~g~~~~~~l~~~~~~~-~~---~~~~~~~~ll~~~gi~v~~g~-------~~~~~~~iRi~~--~~~~  391 (415)
                               ....++++.+.+....... ..   ...++...+ .++|+.+.+..       .+..+..+|+++  .+++
T Consensus       288 ~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~  366 (392)
T PLN03227        288 KLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHS-LSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTR  366 (392)
T ss_pred             ccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHH-HHCCCEEEecccccCCcCCCCCCceEEEEecCCCCH
Confidence                     1223556666664311000 00   012455554 56799986522       122357899999  4799


Q ss_pred             hhHHHHHHHHHHHHHHHH
Q 014936          392 YSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       392 ~~l~~~l~~l~~~~~~~~  409 (415)
                      |+++++++.|++++++..
T Consensus       367 eei~~~~~~l~~~~~~~~  384 (392)
T PLN03227        367 EDIDKLLTVLGEAVEAIL  384 (392)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999998764

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.96  E-value=6.5e-26  Score=215.31  Aligned_cols=337  Identities=14%  Similarity=0.109  Sum_probs=227.7

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--C------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY--A------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y--~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      +.|+.+.+     .+.++.+++++.+.+........  .      ......++|+.+++++      ++++++|++++|+
T Consensus         5 ~yld~aa~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~   73 (402)
T TIGR02006         5 IYLDYAAT-----TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSGA   73 (402)
T ss_pred             EEeeCCcC-----CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCH
Confidence            56666653     35678899999887753211111  0      0123556788888887      4678899999999


Q ss_pred             HHHHHHHHHHhc----CCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936          110 TQAIDVAMALLS----RPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (415)
Q Consensus       110 ~~al~~~~~~l~----~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  182 (415)
                      +++++.++.++.    ++||+|+++.++|+++...   ++..|+++..++.++  ++.+|++.+++.+++++++++++++
T Consensus        74 t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~v~~~  151 (402)
T TIGR02006        74 TESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRDDTILVSIMHV  151 (402)
T ss_pred             HHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEECC
Confidence            999999887763    6899999999999876544   345699999988753  3568999999999888999999999


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  262 (415)
                      +||||.+.+   +++|.++|+++|+++++|++++...    .+..+...+.+   +++.|.+|.++.+|  +|++++++.
T Consensus       152 ~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~----~~~~~~~~~~D---~~~~s~~K~~gp~G--~G~l~~~~~  219 (402)
T TIGR02006       152 NNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK----IPINVNELKVD---LMSISGHKIYGPKG--IGALYVRRK  219 (402)
T ss_pred             CcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC----cccCccccCCC---EEEEehhhhcCCCc--eEEEEEccC
Confidence            999999964   7788888999999999999998633    22223333333   77788899876556  899888753


Q ss_pred             CCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceE
Q 014936          263 CGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMA  340 (415)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~  340 (415)
                      ......+.+...-.......++++.....++..+++.. ...++...++.+++++.+.+.|+.++++.+...+.  ....
T Consensus       220 ~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~  298 (402)
T TIGR02006       220 PRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGN  298 (402)
T ss_pred             CCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCe
Confidence            21110110000000001112455666666666666532 24577788899999999999999887765321111  1111


Q ss_pred             EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHH
Q 014936          341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLD  399 (415)
Q Consensus       341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~  399 (415)
                      +.+.++.      .+...+...+   ++|.+..|..|..                   .+++|+|++  ++++|++.+++
T Consensus       299 ~~v~f~~------~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~  369 (402)
T TIGR02006       299 LNVSFNY------VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVK  369 (402)
T ss_pred             EEEEEeC------cCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHH
Confidence            1222321      1233443332   4888888877642                   378999995  68999999999


Q ss_pred             HHHHHHHHHH
Q 014936          400 RIKSFYQRHA  409 (415)
Q Consensus       400 ~l~~~~~~~~  409 (415)
                      .|+++++.++
T Consensus       370 ~l~~~~~~~~  379 (402)
T TIGR02006       370 LVKSAIDKLR  379 (402)
T ss_pred             HHHHHHHHHH
Confidence            9999887753

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.96  E-value=5.1e-26  Score=215.74  Aligned_cols=345  Identities=19%  Similarity=0.160  Sum_probs=229.1

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+++.++||..|.-....+.. +|.+.+|+.+++.....  ..|.. ....++.+.+++..        ..++++++++|
T Consensus        36 ~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~sG  105 (406)
T PRK12381         36 QQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSG  105 (406)
T ss_pred             CCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC--------CCCeEEEcCCc
Confidence            347789999886432222333 89999999999874211  11211 12344555555543        24799999999


Q ss_pred             HHHHHHHHHHhc--------CCCCEEEEcCCCCcchHHHHHhCCCeEEE----eeccC--CCCCCCChhHHHhhcCCCce
Q 014936          110 TQAIDVAMALLS--------RPGANILLPRPGFPIYELSAAFRHIEVRH----FDLLP--DKGWEVDLDDIESLADQNTV  175 (415)
Q Consensus       110 ~~al~~~~~~l~--------~~gd~vi~~~p~y~~~~~~~~~~g~~~~~----~~~~~--~~~~~~~~~~l~~~~~~~~~  175 (415)
                      ++|++.+++...        .....|+..+.+|++....+...+.....    .+..+  ....-.|++.+++.+++++.
T Consensus       106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~a  185 (406)
T PRK12381        106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTC  185 (406)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCee
Confidence            999999999863        13467999999999876554433321110    00000  00011478999998876666


Q ss_pred             EEEecCCCCccccCC--CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936          176 ALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       176 ~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      ++++ +|.|++|-++  +.+.+++|.++|++||+++|+||+|.++.+.|... ....++....   +.|+||.++ +|+|
T Consensus       186 avii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~~  259 (406)
T PRK12381        186 AVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGFP  259 (406)
T ss_pred             EEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCCc
Confidence            5555 8999887654  78999999999999999999999998876666432 2222222222   348999975 7999


Q ss_pred             EEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC-CCcC
Q 014936          254 LGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP-CISC  331 (415)
Q Consensus       254 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~  331 (415)
                      +||+++++        ++++.+.... ..+++.+++.+.++.+.|+..   .-++..++++++.+++.+.|+++. ....
T Consensus       260 ig~~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l---~~~~~~~~~~~~~~~l~~~L~~l~~~~~~  328 (406)
T PRK12381        260 IGAMLTTE--------KCASVMTVGTHGTTYGGNPLASAVAGKVLELI---NTPEMLNGVKQRHDWFVERLNTINARYGL  328 (406)
T ss_pred             eEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            99999865        6777775532 334577889999888877542   123567888888888888887651 1221


Q ss_pred             C-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          332 P-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       332 ~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      + ..+..|.++++.++...    ......+...+.++||.+.+..    ++.+|++++  .+++++++++++|.++++++
T Consensus       329 ~~~vrg~Gl~~~~~l~~~~----~~~~~~~~~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~  400 (406)
T PRK12381        329 FSEIRGLGLLIGCVLNAEY----AGKAKQISQEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACERF  400 (406)
T ss_pred             EEEEecCeEEEEEEecCch----hhHHHHHHHHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence            1 12355788888775310    0122334445567899997642    468999984  78999999999999999876


Q ss_pred             HHH
Q 014936          409 AKQ  411 (415)
Q Consensus       409 ~~~  411 (415)
                      .++
T Consensus       401 ~~~  403 (406)
T PRK12381        401 VSR  403 (406)
T ss_pred             Hhc
Confidence            554

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.95  E-value=9.6e-26  Score=210.55  Aligned_cols=290  Identities=19%  Similarity=0.193  Sum_probs=205.9

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g  145 (415)
                      +.+|+++ ...+|++.+|++.+        .+..++++|+++++.+++ .++++||+|+++.|+|++...    .+...|
T Consensus        46 y~r~~~p-t~~~le~~la~l~g--------~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G  115 (366)
T PRK08247         46 YSRTGNP-TRGVLEQAIADLEG--------GDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWN  115 (366)
T ss_pred             ccCCCCc-hHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence            4566664 57899999999982        234578888899999876 567899999999999997533    445689


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.       .|++.+++++++++++|++++|+||+|..   .++++|+++|+++|+++|+|++|......    
T Consensus       116 ~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~----  181 (366)
T PRK08247        116 VRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQ----  181 (366)
T ss_pred             ceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc----
Confidence            99888764       37899999998899999999999998665   89999999999999999999999643221    


Q ss_pred             ccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      .++. .   ...+++.|+||.++. ++++.|++++++       .++.+.+..... .....++..+.++...|+.    
T Consensus       182 ~p~~-~---g~di~i~S~sK~~~g~~d~~~G~iv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t----  246 (366)
T PRK08247        182 RPLE-E---GADIVIHSATKYLGGHNDVLAGLVVAKG-------QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT----  246 (366)
T ss_pred             Cchh-c---CCcEEEeecceeccCCCceeeeEEecCh-------HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc----
Confidence            1111 1   234899999999865 356899988753       246666655433 2345677777777777764    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-CCceEEEEecCccccCCCCCHHHHHHHH---------HhhcCeEEEc
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-EGSMAVMLKLNLSLLDDIIDDIDFCFKL---------AKEESVIILP  373 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~l---------l~~~gi~v~~  373 (415)
                       +..+.++.+++++.+.+.|++.|++..+.+| .+|++.| .++..     .....++..+         .....+.+.|
T Consensus       247 -l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~-----~~~~~~~~~l~~~~~~~slg~~~sl~~~p  319 (366)
T PRK08247        247 -LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDE-----EWVNPFLKSLKLITFAESLGGVESFITYP  319 (366)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCH-----HHHHHHHHcCCcceEccCCCCCceEEECC
Confidence             5566777899999999999998887755466 6777766 56410     0011222211         1123455567


Q ss_pred             CCCCCC-------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          374 GTAVGL-------------KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       374 g~~~~~-------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++.+..             ++-+|+|++..  +.+.+++.|.+++++
T Consensus       320 ~~~~~~~~~~~~r~~~gi~~~~~R~svGlE--~~~dl~~dl~~al~~  364 (366)
T PRK08247        320 ATQTHADIPEEIRIANGVCNRLLRFSVGIE--NVEDLIADLKQAFKQ  364 (366)
T ss_pred             cccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence            654321             35799999874  566677777776653

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.95  E-value=5e-26  Score=214.15  Aligned_cols=320  Identities=16%  Similarity=0.142  Sum_probs=219.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGANIL  128 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~i~~g~~~al~~~~~~l~~~gd~vi  128 (415)
                      .++.+.+++++.+.. ......|.  ....++|+.++++++      .++  +.+++++|+++++..++.++..+||.|+
T Consensus        14 ~~~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~------~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vl   84 (368)
T PRK13479         14 LTTSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIAT------GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVL   84 (368)
T ss_pred             CCCCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhC------CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEE
Confidence            456788877775543 11111133  245677777777763      333  5688999999999999999999999999


Q ss_pred             EcCCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          129 LPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       129 ~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +..++|++..  ..++..|+++..++.+.  ++.+|++++++.+++  +++++++++|+||||...|   +++|.++|++
T Consensus        85 v~~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~  159 (368)
T PRK13479         85 VPDNGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKR  159 (368)
T ss_pred             EEeCCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHH
Confidence            9988887653  67788999999998753  346899999998854  4567899999999999976   6688888889


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhc----
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF----  279 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----  279 (415)
                      +|+++|+|++++..    ....++..++.+   +++.|++|++ +.+|  +||+++++        ++++.+....    
T Consensus       160 ~~~~livDa~~~~g----~~~~~~~~~~~d---~~v~s~~K~l~g~~G--~G~l~~~~--------~~~~~~~~~~~~~~  222 (368)
T PRK13479        160 HGKRLIVDAMSSFG----AIPIDIAELGID---ALISSANKCIEGVPG--FGFVIARR--------SELEACKGNSRSLS  222 (368)
T ss_pred             cCCEEEEEcccccC----CccccccccCce---EEEecCccccccCCC--ceEEEECH--------HHHHHhhcCCCCee
Confidence            99999999877542    222333333332   6678999975 5677  69999865        4444443321    


Q ss_pred             --------------cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---CceEE
Q 014936          280 --------------DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---GSMAV  341 (415)
Q Consensus       280 --------------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~  341 (415)
                                    ....+++...+.++.++++... ..++++..++++++++.+.+.|+++ ++..+ .+.   .+..+
T Consensus       223 ~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~  300 (368)
T PRK13479        223 LDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPL-LDAEIQSPIIV  300 (368)
T ss_pred             ecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCchhcCceEE
Confidence                          1112455555555555554322 2346778899999999999999988 77633 221   11122


Q ss_pred             EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHHHHH
Q 014936          342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .+.++...  + .+..++...+ .++||.+.+|..+. .+++|+++ + .++++++.+++.|+++++++
T Consensus       301 ~~~~~~~~--~-~~~~~l~~~L-~~~gi~v~~g~~~~-~~~iRis~~~~~t~edi~~~l~~L~~~l~~~  364 (368)
T PRK13479        301 TFHAPADP--A-YDFKEFYERL-KEQGFVIYPGKLTQ-VDTFRIGCIGDVDAADIRRLVAAIAEALYWM  364 (368)
T ss_pred             EEECCCCC--C-cCHHHHHHHH-HHCCEEEecCCCCC-CCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence            22333210  0 1345666665 56699999886542 46899986 4 58999999999999888753

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.95  E-value=1.7e-25  Score=211.04  Aligned_cols=325  Identities=18%  Similarity=0.131  Sum_probs=222.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGAN  126 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~----~gd~  126 (415)
                      .+++|.+.+++.+.+..... ......+..++.+.+.+.+++..|  .+++++++++|+++++..++.++.+    +|++
T Consensus        30 ~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~  106 (371)
T PRK13520         30 TEPHPIARKAHEMFLETNLG-DPGLFPGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKPN  106 (371)
T ss_pred             cCchHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCce
Confidence            34578888999888764211 111112334433444444444344  4556789999999999999877653    5789


Q ss_pred             EEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936          127 ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (415)
Q Consensus       127 vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  206 (415)
                      |++.++.|.++...++..|.++..++.+  .++.+|+++|+++++++++.+++++++|+||.+.|   +++|.++|+++|
T Consensus       107 vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g  181 (371)
T PRK13520        107 IVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALENG  181 (371)
T ss_pred             EEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHcC
Confidence            9999999999999999899999998874  34568999999999888888888889999999955   788888889999


Q ss_pred             cEEEEccccCCcccCC-CCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-----
Q 014936          207 TLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-----  280 (415)
Q Consensus       207 ~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----  280 (415)
                      +++++|++|+.+...- .....+ .+....-..+..|.+|+ +.+|.++|+++..++       ++.+.+.....     
T Consensus       182 ~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~~-------~~~~~l~~~~~~~~~~  252 (371)
T PRK13520        182 IFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRDE-------SYLDALAVDTPYLTSK  252 (371)
T ss_pred             CCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcCH-------HHHHhhcccCccccCC
Confidence            9999999998765321 111111 11111111444577895 777889999887542       35454432110     


Q ss_pred             ----ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCH
Q 014936          281 ----ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDD  356 (415)
Q Consensus       281 ----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~  356 (415)
                          ..++.+.....++..+|+...++.+++..++..++++++.+.|+++ ++..+..|. ..++.+.++        +.
T Consensus       253 ~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~--------~~  322 (371)
T PRK13520        253 KQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPV-LNIVAFDDP--------NP  322 (371)
T ss_pred             CCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCC-ceEEEEecC--------CH
Confidence                0112333455666666665445667888899999999999999988 776232443 446666554        34


Q ss_pred             HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936          357 IDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       357 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~  406 (415)
                      .++...| .++||.+.++.   ..+++|+++.  +++++++.+++.|+++++
T Consensus       323 ~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        323 DEVREKL-RERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK  370 (371)
T ss_pred             HHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence            5666665 45699987643   2568999984  689999999999988764

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.95  E-value=8e-27  Score=217.83  Aligned_cols=309  Identities=16%  Similarity=0.113  Sum_probs=222.2

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----------
Q 014936           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----------  122 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~-----------  122 (415)
                      +..+.+.+...+.... ..|+...+..++++++++++.+.+|.+..++++++|+|+++++..++.++..           
T Consensus        12 ~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~   90 (345)
T cd06450          12 PALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGG   90 (345)
T ss_pred             HHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence            3455555666655444 3588778899999999999998888664556899999999999999988742           


Q ss_pred             -C--CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHH
Q 014936          123 -P--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       123 -~--gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~  193 (415)
                       +  ++.|+++.++|.++...+...|.+++.++.+++  +.+|+++|++.+++      +++++++++|+||||.+   +
T Consensus        91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~---~  165 (345)
T cd06450          91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI---D  165 (345)
T ss_pred             cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---C
Confidence             2  347889999999998888888999999987543  36899999999876      77888999999999998   6


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++++|+++|+++|+++++|++|+.+.+....... ...+.  .-..+..|++|+ +.++.++|+++.             
T Consensus       166 ~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~-l~~p~g~g~~~~-------------  229 (345)
T cd06450         166 PLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIE--RVDSISVDPHKY-GLVPLGCSAVLV-------------  229 (345)
T ss_pred             CHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCcc--ccCEEEEchhHh-hCCCcchHHHHH-------------
Confidence            6899999999999999999999887643221111 11111  112556799997 456667777643             


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      .             ...+.++...+.   ...++++.++..++++++.+.|++++++.++..+. +.++.+.++.....+
T Consensus       230 ~-------------~~~~~~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~iv~f~~~~~~~~~  292 (345)
T cd06450         230 R-------------ALKLWATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPN-LSLVCFRLKPSVKLD  292 (345)
T ss_pred             H-------------HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-eeEEEEEECCcchhh
Confidence            1             344445555554   36688888999999999999999988877442344 445555554210000


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--C-ChhhHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--V-DPYSLEECLDRIKS  403 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~-~~~~l~~~l~~l~~  403 (415)
                       .+..++...+ .++|+.+.++..+..+.++|++++  . +.++++.+++.|++
T Consensus       293 -~~~~~i~~~L-~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         293 -ELNYDLSDRL-NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             -HHHHHHHHHH-HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence             1234555555 566666555554445679999995  3 78999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.95  E-value=9.3e-26  Score=211.83  Aligned_cols=293  Identities=14%  Similarity=0.136  Sum_probs=209.2

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHHhCCCeEEEeecc
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLL  154 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~--~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~  154 (415)
                      ..++|+.+++++      ++++  +.|++|+|+|++++.++.++..+||.+++..+++++.  ...++..|.+++.++.+
T Consensus        37 ~~~~r~~la~l~------~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~  110 (363)
T TIGR02326        37 VEQIRQQLLALA------TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTG  110 (363)
T ss_pred             HHHHHHHHHHHh------CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC
Confidence            345677777776      3444  4799999999999999999988888887776666554  36678899999998874


Q ss_pred             CCCCCCCChhHHHhhcCC--CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          155 PDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       155 ~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      +  ++.+|++.++++++.  +++.+.+++++||||..+|   +++|+++|+++|+++++|++++.    |..+.++..++
T Consensus       111 ~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~----g~~~~~~~~~~  181 (363)
T TIGR02326       111 E--VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF----GGIPIDIAELH  181 (363)
T ss_pred             C--CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc----cCcccchhhcC
Confidence            3  446899999998864  3467888999999999976   67889999999999999999875    22233444444


Q ss_pred             CCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHh---------------h----ccccCCchhHHHHH
Q 014936          233 STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKK---------------Y----FDILGDPATFIQAA  292 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~~~~~~~~~~a  292 (415)
                      .+   ++++|++|++ +.+|  +||+++++        +.++.+..               .    ....++++...+.+
T Consensus       182 ~D---~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~a  248 (363)
T TIGR02326       182 ID---YLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHA  248 (363)
T ss_pred             cc---EEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHH
Confidence            33   7788999986 3456  79999865        33333211               0    00123556677777


Q ss_pred             HHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCe
Q 014936          293 VPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV  369 (415)
Q Consensus       293 ~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi  369 (415)
                      +.++++...+. .+++..++++++++++.+.|+++ ++..+..+  ..+...++.++...  + .+..++...+ +++||
T Consensus       249 l~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~L-~~~gi  323 (363)
T TIGR02326       249 FAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDP--D-YRFADFYQRL-KEQGF  323 (363)
T ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCC--C-CCHHHHHHHH-HHCCE
Confidence            77666543222 46778899999999999999887 66633222  34445677665310  0 1344555555 67799


Q ss_pred             EEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHH
Q 014936          370 IILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       370 ~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~  405 (415)
                      .+.||..+. .++|||++ + .+.++++.+++.|++++
T Consensus       324 ~v~~g~~~~-~~~iRi~~~~~~~~edv~~~l~~l~~~l  360 (363)
T TIGR02326       324 VIYPGKVSQ-VDCFRIGNIGEVDAADITRLLTAIGKAM  360 (363)
T ss_pred             EEECCcCCC-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            999997653 57999997 4 68999999999998875

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PLN02242 methionine gamma-lyase

Probab=99.95  E-value=8.7e-26  Score=212.97  Aligned_cols=219  Identities=16%  Similarity=0.147  Sum_probs=168.1

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-----HhCCCeEEEe
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-----AFRHIEVRHF  151 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~-----~~~g~~~~~~  151 (415)
                      ....+|++.+|+++        ..+.+++++||++|+..++.+++++||+|+++.|.|+.+...+     +..|+++..+
T Consensus        76 Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~  147 (418)
T PLN02242         76 PTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV  147 (418)
T ss_pred             hhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc
Confidence            46789999999987        4567789999999999999999999999999999998876654     3467777665


Q ss_pred             eccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc
Q 014936          152 DLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (415)
Q Consensus       152 ~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  230 (415)
                      +.       .|++.+++++++ ++++|++++|+||||.+.   ++++|+++|+++|+++|+|++|..+.+..      ..
T Consensus       148 d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~------~~  211 (418)
T PLN02242        148 DI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP------AR  211 (418)
T ss_pred             CC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH------HH
Confidence            43       379999999988 499999999999999995   68888999999999999999998755421      12


Q ss_pred             cCCCCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          231 FGSTVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       231 ~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      ++   ..+++.|+||.++++|++ .||+++++        ++++.++....   ...+.....|.|...++..   ..+.
T Consensus       212 ~g---~divv~S~SK~l~g~g~~~gG~iv~~~--------~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l---~tl~  277 (418)
T PLN02242        212 LG---ADVVVHSISKFISGGADIIAGAVCGPA--------ELVNSMMDLHHGALMLLGPTMNPKVAFELSERL---PHLS  277 (418)
T ss_pred             cC---CcEEEEeCccccCCCCCceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC---CcHH
Confidence            22   348899999999999988 58888754        56666665422   1233444455666555543   3466


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          307 KTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      .+.++++++++.+.+.|+++ ++. +.+|
T Consensus       278 ~r~~~~~~~a~~la~~L~~~-~~~-V~yP  304 (418)
T PLN02242        278 LRMKEHCRRAMEYAKRMKEL-GLK-VIYP  304 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHhC-CCE-EECC
Confidence            67789999999999999987 455 3344

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.95  E-value=4.8e-26  Score=217.67  Aligned_cols=345  Identities=17%  Similarity=0.121  Sum_probs=227.1

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++|+..|...... -..+|.+.+++++++...... +.+..+..+|+++|++++.       ..+++++++|+++
T Consensus        45 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~-~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGse  115 (423)
T TIGR00713        45 VDGNEYIDYVLSWGPLIL-GHAHPRVVEAVKEALERGTSY-GAPTEAEILLAKEIISRVP-------SVEMVRFVNSGTE  115 (423)
T ss_pred             CCCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCcC-CCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHHH
Confidence            358899999988754321 135799999999998865432 2244577899999999872       2368999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHh---CCCeEEEeeccCC-------CCC---CCChhHHHhhcC---CC
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPD-------KGW---EVDLDDIESLAD---QN  173 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~---~g~~~~~~~~~~~-------~~~---~~~~~~l~~~~~---~~  173 (415)
                      |+..+++...  ...++|+...++|+++...+..   .+......+..+.       ...   ..|++++++.++   .+
T Consensus       116 A~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~  195 (423)
T TIGR00713       116 ATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEE  195 (423)
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCc
Confidence            9999998643  2348999999999997654432   1111110111000       000   027889988875   34


Q ss_pred             ceEEEec-CCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936          174 TVALVII-NPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (415)
Q Consensus       174 ~~~v~i~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  251 (415)
                      ++++++. .|+| +|.+++ .+.+++|.++|++||+++|+||+|.++.++......  .++...+   +.+|||.++ +|
T Consensus       196 ~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~--~~~~~pD---i~t~sK~l~-~G  268 (423)
T TIGR00713       196 IAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQE--YFGVEPD---LTTLGKIIG-GG  268 (423)
T ss_pred             EEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHH--HhCCCcc---hhhhhhhhc-CC
Confidence            5666663 6677 788877 689999999999999999999999887432211111  1222222   337999986 89


Q ss_pred             ceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      +|+||+++++        ++++.+...    ...+++.+++++.++.+.|+... ++..++..+..+.+++.+.+.++++
T Consensus       269 ~pig~v~~~~--------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  340 (423)
T TIGR00713       269 LPVGAFGGRR--------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT  340 (423)
T ss_pred             CceeeeeEHH--------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999975        677777531    22345789999998888886432 2356666677777777777777776


Q ss_pred             CCCcCCCCCCCceEEEEecCccccCC-----CCCH---HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHH
Q 014936          327 PCISCPHKPEGSMAVMLKLNLSLLDD-----IIDD---IDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECL  398 (415)
Q Consensus       327 ~~~~~~~~p~~g~~~~~~l~~~~~~~-----~~~~---~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l  398 (415)
                       ++... ....|.++.+.+......+     ..+.   ..+...++ ++||.+.++. +   +.+|+++..+++++++++
T Consensus       341 -~~~~~-v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~-~---~~~~l~~~~t~~~i~~~~  413 (423)
T TIGR00713       341 -GIPHT-VNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQ-F---EACFLSAAHTEEDIENTI  413 (423)
T ss_pred             -CCCeE-EEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCC-c---cceeeECCCCHHHHHHHH
Confidence             44311 1223434443343211000     0011   24555554 5799987542 2   458999888999999999


Q ss_pred             HHHHHHHHH
Q 014936          399 DRIKSFYQR  407 (415)
Q Consensus       399 ~~l~~~~~~  407 (415)
                      ++|.+++++
T Consensus       414 ~~l~~~l~~  422 (423)
T TIGR00713       414 EAAEEVFAE  422 (423)
T ss_pred             HHHHHHHhh
Confidence            999988864

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.95  E-value=6e-25  Score=206.81  Aligned_cols=228  Identities=19%  Similarity=0.241  Sum_probs=167.5

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g  145 (415)
                      +.+|+++ ...+|++.+|++++        .+..+++++|++++..++.+++++||+|+++.+.|..+...    +...|
T Consensus        59 y~r~~~p-~~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G  129 (398)
T PRK07504         59 YSRYSNP-TVDMFEKRMCALEG--------AEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYG  129 (398)
T ss_pred             eecCCCc-hHHHHHHHHHHHhC--------CCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC
Confidence            3456553 56899999999982        33445677889999888888889999999999999975543    34568


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++       ..|++++++++++++++|++++|+||+|.+.+   +++|.++|+++|+++|+|++|+...+.    
T Consensus       130 ~~v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~----  195 (398)
T PRK07504        130 IESTLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ----  195 (398)
T ss_pred             eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence            8887774       26899999999999999999999999999976   777888888999999999999865432    


Q ss_pred             ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVF  304 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~  304 (415)
                      .++ .++.   .+++.|+||.++.+|+++|++++.++.      .+.+.++.. .......++.....+...|+.     
T Consensus       196 ~~~-~~ga---Divv~S~sK~l~g~g~~~GG~vv~~~~------~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t-----  260 (398)
T PRK07504        196 KPL-ELGA---HIVVYSATKHIDGQGRCLGGVVLSDKA------WIEEHLQDYFRHTGPSLSPFNAWTLLKGLET-----  260 (398)
T ss_pred             Cch-hhCC---CEEEeeccccccCCccceEEEEEeCcH------HHHHHHHHHHHHhCCCCCHHHHHHHHhccch-----
Confidence            111 2232   378899999999999999765544321      232334432 233345666666666666654     


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +..+.++..++...+.+.|++.|++..+.+|
T Consensus       261 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp  291 (398)
T PRK07504        261 LPVRVRQQTESAAAIADFLAGHPKVARVIYP  291 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence            6777778888999999999887766534343

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.95  E-value=2.3e-25  Score=209.37  Aligned_cols=290  Identities=16%  Similarity=0.157  Sum_probs=201.3

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g  145 (415)
                      +.+|+++ ...+|++.+|++++        .+..+++++|++++..++.+++++||+|+++.|.|......+    ...|
T Consensus        55 y~r~~~p-t~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g  125 (386)
T PRK06767         55 YSRLGNP-TVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM  125 (386)
T ss_pred             ccCCCCc-chHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence            4466664 46899999999983        345566667778999999999999999999999998765543    3346


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.       .|++++++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|+...+.    
T Consensus       126 i~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~----  191 (386)
T PRK06767        126 ITHSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ----  191 (386)
T ss_pred             eEEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence            65554432       3789999999889999999999999999976   677788888999999999999753321    


Q ss_pred             ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHh-hc-cccCCchhHHHHHHHHhhCCCcH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKK-YF-DILGDPATFIQAAVPSILQQPDE  302 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~a~~~~l~~~~~  302 (415)
                      .++ ..+.   .+++.|+||.++.+|.++ ||+++++        +.++.+.. .. ......++..+.++...|+.   
T Consensus       192 ~pl-~~g~---Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t---  256 (386)
T PRK06767        192 RPL-ELGC---DAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT---  256 (386)
T ss_pred             Cch-hcCC---cEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc---
Confidence            122 1222   277889999998889886 7888765        44544332 22 22334466655665555543   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936          303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL  372 (415)
Q Consensus       303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~  372 (415)
                        +..+.++.++++..+.+.|+++|++..+.+|.          .|..+.+.++..    ..+..+++..+ +..++.++
T Consensus       257 --l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~----~~~~~~f~~~l-~~~~~~~s  329 (386)
T PRK06767        257 --LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG----KEETQAFINDL-HFITIAVS  329 (386)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC----HHHHHHHHHhC-CccEEecC
Confidence              55677888999999999999999887554442          233455556421    11344555554 66677776


Q ss_pred             cCCCCCC-----------------------CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          373 PGTAVGL-----------------------KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       373 ~g~~~~~-----------------------~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      -|.....                       ++.||+|++..  +.+.+++.|.+++.
T Consensus       330 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~  384 (386)
T PRK06767        330 LGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE--SWEDIVSDLEQALK  384 (386)
T ss_pred             CCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence            6643210                       35799999874  46666666666664

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.95  E-value=6.9e-25  Score=206.23  Aligned_cols=227  Identities=19%  Similarity=0.221  Sum_probs=169.8

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~----~~~~~~~~g  145 (415)
                      +.+|+++ ...+|++.+|++.+       .++. +++++|++++.+++.+++++||+|+++.|+|+.    +...+...|
T Consensus        54 y~R~~~p-~~~~Le~~lA~l~g-------~~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g  124 (405)
T PRK08776         54 YTRSGNP-TRDLLGEALAELEG-------GAGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGH  124 (405)
T ss_pred             ccCCCCh-HHHHHHHHHHHHhC-------CCce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcC
Confidence            4455553 45788888888762       2344 566666899999999999999999999999987    344455667


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      .++..++.       .|++.+++.+++++++|++++|+||||.+   .++++|+++|+++|+++|+|++|....    ..
T Consensus       125 ~~v~~v~~-------~d~~~l~~~i~~~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~----~~  190 (405)
T PRK08776        125 FALITADL-------TDPRSLADALAQSPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPA----LQ  190 (405)
T ss_pred             cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCcccc----cC
Confidence            77777653       37899999998889999999999999999   568899999999999999999997532    12


Q ss_pred             ccccccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      .++ .++.+   +++.|++|.++.+ ++..|++++++       +++.+++..... .....+++.+.++...++     
T Consensus       191 ~pl-~~gaD---ivv~S~tK~l~g~~~~~~G~vv~~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~-----  254 (405)
T PRK08776        191 KPL-EFGAD---LVLHSTTKYINGHSDVVGGAVVARD-------AELHQQLVWWANALGLTGSPFDAFLTLRGLR-----  254 (405)
T ss_pred             Ccc-cccCC---EEEecCceeecCCCCceEEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhC-----
Confidence            222 23333   8888999998765 57789888754       246666654432 234567777777766664     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +++.+.++..+++..+.+.|+..|.+..+.+|
T Consensus       255 tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP  286 (405)
T PRK08776        255 TLDARLRVHQENADAIAALLDGHAAVNQVYYP  286 (405)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence            47889999999999999999987765544444

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.95  E-value=3.6e-25  Score=210.49  Aligned_cols=333  Identities=13%  Similarity=0.103  Sum_probs=222.6

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG-YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++|+..|.-.... --.+|.+.+++.++++...... +.......++.+.++++.        ..+.++++++|++
T Consensus        39 ~g~~~lD~~~~~~~~~~-Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~  109 (401)
T PRK00854         39 DGNRYLDCLSAYSAVNQ-GHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGAE  109 (401)
T ss_pred             CCCEEEEcCcchhhccC-CCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcHH
Confidence            47788998777422111 1137899999999987543211 112233456677777664        2468999999999


Q ss_pred             HHHHHHHHhcC---------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCCChhHHHh
Q 014936          112 AIDVAMALLSR---------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIES  168 (415)
Q Consensus       112 al~~~~~~l~~---------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~  168 (415)
                      |+..+++++..         +| ++|++...+|++....+...+.             ++..++.       .|++.+++
T Consensus       110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~  182 (401)
T PRK00854        110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALEA  182 (401)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHHH
Confidence            99999998842         23 6788888888775544433222             1222221       47899999


Q ss_pred             hcCCCceEEEecCCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936          169 LADQNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW  247 (415)
Q Consensus       169 ~~~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (415)
                      .+.+++++|++.+|+||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.+.... ....+....++ +  ++|.+
T Consensus       183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~-~~~~g~~~D~~-~--~~K~l  258 (401)
T PRK00854        183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLA-EEHEGIEADVT-L--IGKAL  258 (401)
T ss_pred             HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhH-HhhcCCCCCEE-E--ecccc
Confidence            99888999999999999999987 45699999999999999999999987655443211 11112111223 2  47997


Q ss_pred             CCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      +...+|+||+++++        ++.+.+... ...+.+.+++.+.++.+.|+...   -+...++++++.+++.+.|+++
T Consensus       259 ~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~---~~~~~~~~~~~~~~l~~~L~~~  327 (401)
T PRK00854        259 SGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVARAALKVLT---EEGMIENAAEMGAYFLEGLRSI  327 (401)
T ss_pred             cCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHH---HcCHHHHHHHHHHHHHHHHHhh
Confidence            65558999999975        566666543 22344578889999988886421   1235678888889999999876


Q ss_pred             CCCcCCC-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936          327 PCISCPH-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS  403 (415)
Q Consensus       327 ~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~  403 (415)
                      . ...+. ....|.++.+.+....    .+..++...++ ++||.+.+..    .+++|+++  ..+++++++++++|++
T Consensus       328 ~-~~~~~~~~g~g~~~~i~~~~~~----~~~~~~~~~L~-~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l~~  397 (401)
T PRK00854        328 R-SNIVREVRGRGLMLAVELEPEA----GGARQYCEALK-ERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQIAK  397 (401)
T ss_pred             c-cCceEEEeccceEEEEEEecCc----hhHHHHHHHHH-HCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence            2 22111 1233544444442210    13456777765 5699997532    47999997  4789999999999998


Q ss_pred             HHH
Q 014936          404 FYQ  406 (415)
Q Consensus       404 ~~~  406 (415)
                      ++.
T Consensus       398 ~l~  400 (401)
T PRK00854        398 VLA  400 (401)
T ss_pred             Hhh
Confidence            763

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.95  E-value=8.1e-25  Score=206.50  Aligned_cols=314  Identities=17%  Similarity=0.160  Sum_probs=215.0

Q ss_pred             cHHHHHHHHHHHhcC--CCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc------CCC
Q 014936           54 THVATEAVAEALLSE--KFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS------RPG  124 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~--~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~------~~g  124 (415)
                      .+.+.+++...+...  ....|+. ..-..++++.+|+++      +++++++++++|+++++..++.++.      ++|
T Consensus        33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g  106 (373)
T TIGR03812        33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRT  106 (373)
T ss_pred             hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCC
Confidence            466677777765432  1112321 111245666666665      3566788999999999988877654      467


Q ss_pred             CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       125 d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      |+|++++++|.++...++..|++++.++++  .++.+|++++++.+++++..++++.|+||||.+.   ++++|+++|++
T Consensus       107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~---~~~~i~~l~~~  181 (373)
T TIGR03812       107 PNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQID---DIEELSKIALE  181 (373)
T ss_pred             cEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccC---CHHHHHHHHHH
Confidence            999999999999999999999999999875  3466899999999987776666666899999994   57788888889


Q ss_pred             cCcEEEEccccCCcccC--C--CC--cccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh
Q 014936          205 LKTLVIADEVYGHLVFG--D--KP--FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~--~--~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~  278 (415)
                      +|+++|+|++|+.+...  .  ..  ...+.....+   .+..|.+| |+.++.+.|+++..++       ++.+.++..
T Consensus       182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d---~~~~s~~K-~~~~~~~~G~~~~~~~-------~~~~~l~~~  250 (373)
T TIGR03812       182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQ---SITIDPHK-MGLSPIPAGGILFRSK-------SYLKYLSVD  250 (373)
T ss_pred             cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCC---EEEECccc-cCCCcCCceEEEEeCH-------HHHhhhccc
Confidence            99999999999865421  0  00  1111111111   34457789 4777788887776442       355544321


Q ss_pred             ccc---------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          279 FDI---------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       279 ~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      ...         .++.+.....++..+|+...+..+++..+++.++++++.+.|+++ ++..+ .+....++.+.++   
T Consensus       251 ~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~v~~~~~---  325 (373)
T TIGR03812       251 APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPV-IEPVLNIVAFEVD---  325 (373)
T ss_pred             CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEE-cCCCceEEEEEeC---
Confidence            110         023344556666666765445778888999999999999999988 45423 2334556666654   


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKS  403 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~  403 (415)
                           +..++...| .++||.+.++.   .++++|++++  +++++++.+++.|++
T Consensus       326 -----~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~  372 (373)
T TIGR03812       326 -----DPEEVRKKL-RDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE  372 (373)
T ss_pred             -----CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence                 234555555 56699987653   3579999995  689999999999875

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PRK14012 cysteine desulfurase; Provisional

Probab=99.95  E-value=7.4e-25  Score=208.35  Aligned_cols=334  Identities=13%  Similarity=0.135  Sum_probs=219.0

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHh--cCCCCCCC--------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALL--SEKFNGYA--------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~y~--------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      +.|+.+..     .++++.+.+++.+.+.  ........        ......++|+.+++++      +.+++++++++
T Consensus         5 iyld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~~   73 (404)
T PRK14012          5 IYLDYSAT-----TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFTS   73 (404)
T ss_pred             EEecCcCC-----CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEeC
Confidence            55666653     3567889999988775  21111110        0123556788888887      45778899999


Q ss_pred             ChHHHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEec
Q 014936          108 GCTQAIDVAMALLS----RPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII  180 (415)
Q Consensus       108 g~~~al~~~~~~l~----~~gd~vi~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~  180 (415)
                      |+|+++++++.++.    ++||+|+++.++|++.....   +..|++++.++.++  ++.+|++++++++++++++++++
T Consensus        74 g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~  151 (404)
T PRK14012         74 GATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSIM  151 (404)
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEE
Confidence            99999999887764    78999999999998765543   34699999888753  45689999999999999999999


Q ss_pred             CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      +++||||.+.+   +++|.++|+++|+++|+|++++...    ....+...+.+   +++.|++|.++..  ++|+++++
T Consensus       152 ~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~----~~~~~~~~~~D---~~~~s~~K~~gp~--g~G~l~~~  219 (404)
T PRK14012        152 HVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSVGK----VPIDLSKLKVD---LMSFSAHKIYGPK--GIGALYVR  219 (404)
T ss_pred             CcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhcCC----cccCcccCCCC---EEEEehhhccCCC--ceEEEEEe
Confidence            99999999954   7888889999999999999998633    22223333333   6777999976433  58999887


Q ss_pred             CCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC-C---C
Q 014936          261 DPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK-P---E  336 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p---~  336 (415)
                      +.......+.+...-.......++.+.....++.++++.. ....+...++.++.++++.+.|++++++..... +   .
T Consensus       220 ~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~  298 (404)
T PRK14012        220 RKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVP  298 (404)
T ss_pred             cCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence            6431110000000000000111233333333443444321 234556678888899999999988776652211 1   1


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLE  395 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~  395 (415)
                      ...++++.+.        +..++...+   .++.+..|..|..                   .+.||+++.  ++++|++
T Consensus       299 ~~~~~~~~~~--------~~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd  367 (404)
T PRK14012        299 GNLNVSFNYV--------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEID  367 (404)
T ss_pred             CEEEEEEeCc--------CHHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHH
Confidence            1223454432        223444433   3777777755522                   368999994  6899999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRH  408 (415)
Q Consensus       396 ~~l~~l~~~~~~~  408 (415)
                      .+++.|+++++.+
T Consensus       368 ~~~~~l~~~~~~~  380 (404)
T PRK14012        368 YAIELVRKSIGKL  380 (404)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988765

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.95  E-value=2.3e-25  Score=212.33  Aligned_cols=353  Identities=14%  Similarity=0.129  Sum_probs=227.0

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++||..|......+ -.+|.+.+++.+++....+ .+....+.+ ...++|+++....+.+. .++++++++|++
T Consensus        38 ~dG~~~lD~~~g~~~~~lG-h~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~-~~~~~f~~sGse  113 (425)
T PRK08088         38 VEGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDF-AKKTLLVTTGSE  113 (425)
T ss_pred             CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCC-CCEEEEeCCcHH
Confidence            3478899998886443221 2478899999999876432 222222233 34477777766444222 147788888888


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEE----------------eeccCCCCCCC--ChhHHHhhcC
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRH----------------FDLLPDKGWEV--DLDDIESLAD  171 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~----------------~~~~~~~~~~~--~~~~l~~~~~  171 (415)
                      |++.+++...  .....|+..+++|++....+...+.....                ++.+. ++...  +++.+++.++
T Consensus       114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~  192 (425)
T PRK08088        114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFK  192 (425)
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHH
Confidence            8887777653  12346777799999887666554332110                11100 11001  1455777764


Q ss_pred             ----CCceEEEecCC--CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          172 ----QNTVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       172 ----~~~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                          ....+.++..|  ++++....+.+.+++|.++|+++|+++|+||+|.++.+.+.. ..+...+   .++.+.||||
T Consensus       193 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~-~~~~~~~---~~pdi~s~sK  268 (425)
T PRK08088        193 NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTL-FAMEQMG---VAADLTTFAK  268 (425)
T ss_pred             hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hHHhhcC---CCCCEEEEec
Confidence                23455677777  567677889999999999999999999999999986655432 1221222   2345789999


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHh
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKI  323 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l  323 (415)
                      .++ +|+|+||+++++        ++++.+.... ..+...+++.|.++..+|+... ++++++.++..+++++.+.+..
T Consensus       269 ~l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~  339 (425)
T PRK08088        269 SIA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIA  339 (425)
T ss_pred             ccc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            975 899999999975        6777775542 3456788999999999997643 2445555555555555555544


Q ss_pred             hcCCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHH
Q 014936          324 KEIPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECL  398 (415)
Q Consensus       324 ~~~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l  398 (415)
                      .+.|.+..+  ...|+++|+.+.....   ++......+...+ .++||.+.|+..+  .+.||++++  .+++++++++
T Consensus       340 ~~~~~~~~v--~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~-~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i  414 (425)
T PRK08088        340 EKHPEIGDV--RGLGAMIAIELFEDGDHSKPNAKLTAQIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGL  414 (425)
T ss_pred             HhCCCeEEE--eccceEEEEEEecCCCCCCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHH
Confidence            456544322  2238899999843211   0111234555554 5679998876544  378999996  5799999999


Q ss_pred             HHHHHHHHH
Q 014936          399 DRIKSFYQR  407 (415)
Q Consensus       399 ~~l~~~~~~  407 (415)
                      ++|.+++.+
T Consensus       415 ~~l~~~l~~  423 (425)
T PRK08088        415 EIIAQCFDE  423 (425)
T ss_pred             HHHHHHHHh
Confidence            999998864

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.95  E-value=9e-25  Score=204.24  Aligned_cols=326  Identities=16%  Similarity=0.107  Sum_probs=227.1

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++++++|++++   +.++..+|+++++..+.++....      .-++...-+.+|+++||+|+        ..+..++.+
T Consensus       101 ~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~s  169 (476)
T PLN02955        101 FKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCP  169 (476)
T ss_pred             CceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEEC
Confidence            45889999999   67788999999999998874211      11222223478999999998        567888888


Q ss_pred             ChHHHHHHHHHHh--------------cCCCCEEEEcCCCCcchHHHHHhC----CCeEEEeeccCCCCCCCChhHHHhh
Q 014936          108 GCTQAIDVAMALL--------------SRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus       108 g~~~al~~~~~~l--------------~~~gd~vi~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      +|..|+..++.++              .+++|.|+.+..+|.++...++..    ++++..+++       .|+++|++.
T Consensus       170 SGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~  242 (476)
T PLN02955        170 TGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSL  242 (476)
T ss_pred             ChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHH
Confidence            8888888888887              256788999999999999998876    577777765       378888877


Q ss_pred             cCC--CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCcc
Q 014936          170 ADQ--NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSK  245 (415)
Q Consensus       170 ~~~--~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK  245 (415)
                      ++.  ....++++.+ .++.|.+.|   +++|.++|++||+++|+||+|+.+.++..+......++. .+..|+++||||
T Consensus       243 L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK  319 (476)
T PLN02955        243 LSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK  319 (476)
T ss_pred             HHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence            743  1234555665 789999966   777777778999999999999998877544433333322 345689999999


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc--ccCCc-hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDP-ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNK  322 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  322 (415)
                      ++|+.|   |++++++        ++++.++....  .+++. ++....++.+.++....  -..++++++++.+++.+.
T Consensus       320 A~G~~G---Gfi~gs~--------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~  386 (476)
T PLN02955        320 AAGCHG---GFIACSK--------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL  386 (476)
T ss_pred             chhccC---ceeecHH--------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh
Confidence            987777   9998865        56777765421  22233 33344444444433211  124667888888888874


Q ss_pred             hhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC---CeEEEEe--eCChhhHHHH
Q 014936          323 IKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK---NWLRVTF--AVDPYSLEEC  397 (415)
Q Consensus       323 l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~--~~~~~~l~~~  397 (415)
                         . ++. .    .+.++.+.+...     ....++.++| .+.||.+.+..++..+   ..+||++  .++++||+.+
T Consensus       387 ---~-G~~-~----~sPI~pI~ig~~-----~~a~~~~~~L-~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~l  451 (476)
T PLN02955        387 ---S-GVD-I----SSPIISLVVGNQ-----EKALKASRYL-LKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKL  451 (476)
T ss_pred             ---c-CCC-C----CCCEEEEEeCCH-----HHHHHHHHHH-HHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHH
Confidence               2 554 2    244444445421     1234555555 5679999987776653   4699999  4789999999


Q ss_pred             HHHHHHHHHHH
Q 014936          398 LDRIKSFYQRH  408 (415)
Q Consensus       398 l~~l~~~~~~~  408 (415)
                      ++.|.++....
T Consensus       452 v~~L~~~~~~~  462 (476)
T PLN02955        452 ITALSSCLDFD  462 (476)
T ss_pred             HHHHHHHHhhh
Confidence            99998876643

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.95  E-value=1.2e-24  Score=203.42  Aligned_cols=228  Identities=16%  Similarity=0.207  Sum_probs=175.5

Q ss_pred             CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhC
Q 014936           69 KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFR  144 (415)
Q Consensus        69 ~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~  144 (415)
                      .+.+|+++ ....|++.+|++.+        .+.+++++|+++++..++.+++++||+|+++.|+|+.....+    ...
T Consensus        45 ~Y~R~~~p-t~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~  115 (386)
T PRK08045         45 DYSRRGNP-TRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRG  115 (386)
T ss_pred             eeeCCCCc-cHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence            35567764 56899999999972        347999999999999999999999999999999998644333    223


Q ss_pred             CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC
Q 014936          145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP  224 (415)
Q Consensus       145 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  224 (415)
                      |.++..++       ..|++.+++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|.....    
T Consensus       116 gi~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~----  181 (386)
T PRK08045        116 CYRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL----  181 (386)
T ss_pred             CeEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----
Confidence            44555543       15889999999889999999999999999976   56777778899999999999986432    


Q ss_pred             cccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH
Q 014936          225 FVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE  302 (415)
Q Consensus       225 ~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~  302 (415)
                      ..++ .++.+   ++++|++|.++ .++.+.|++++++       +++.+.+... ...+.+.++..+..+...|+.   
T Consensus       182 ~~pl-~~gaD---ivv~S~tK~l~G~~d~~~G~vi~~~-------~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t---  247 (386)
T PRK08045        182 QNPL-ALGAD---LVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---  247 (386)
T ss_pred             CCch-hhCCC---EEEeecceeccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc---
Confidence            1222 22332   88999999975 4568899988754       2466666544 334566788888888888875   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                        +..++++..+++..+.+.|+..|.+..+.+|
T Consensus       248 --l~~R~~~~~~na~~la~~L~~~p~v~~V~yp  278 (386)
T PRK08045        248 --LVPRMELAQRNAQAIVKYLQTQPLVKKLYHP  278 (386)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHcCCCEeEEECC
Confidence              8888999999999999999988766544444

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.95  E-value=1.1e-24  Score=204.73  Aligned_cols=221  Identities=18%  Similarity=0.174  Sum_probs=165.1

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~  152 (415)
                      +...++++.+|+++        ..+++++++|+++|+..++.+++++||+|+++.+.|.+...    .+...|+++..++
T Consensus        61 p~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd  132 (390)
T PRK08133         61 PTVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVD  132 (390)
T ss_pred             hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence            34678999999987        34578999999999999999999999999999999986544    4567899998886


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      .       .|++++++++++++++|++.+|+||+|.+.+   +++|+++|+++|+++|+|++|+.....    .++ .++
T Consensus       133 ~-------~d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~----~pl-~~g  197 (390)
T PRK08133        133 L-------TDLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ----QPL-KLG  197 (390)
T ss_pred             C-------CCHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hhC
Confidence            5       2789999999999999999999999999964   788888899999999999998754321    122 122


Q ss_pred             CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNL  311 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  311 (415)
                      .   .+++.|+||.++.+|.++|++++.+.       ++++.+... .......++..+..+...++     .+..+.++
T Consensus       198 ~---Divv~S~sK~~~g~g~~~GG~vv~~~-------~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~-----tl~~R~~~  262 (390)
T PRK08133        198 A---DVVIHSATKYLDGQGRVLGGAVVGSK-------ELMEEVFGFLRTAGPTLSPFNAWVFLKGLE-----TLSLRMEA  262 (390)
T ss_pred             C---cEEEeecceeecCCcceEeEEEEcCH-------HHHHHHHHHHHHhCCCCCHHHHHHHHcccc-----hHHHHHHH
Confidence            2   27889999999999999855544331       455555443 22233445555444433332     46777778


Q ss_pred             HHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          312 LKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       312 ~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ..+++..+.+.|++.|++..+.+|
T Consensus       263 ~~~~a~~la~~L~~~p~v~~v~yp  286 (390)
T PRK08133        263 HSANALALAEWLEAHPGVERVFYP  286 (390)
T ss_pred             HHHHHHHHHHHHHhCCCeeEEECC
Confidence            888999999999988776544444

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.95  E-value=8.9e-25  Score=205.26  Aligned_cols=225  Identities=15%  Similarity=0.157  Sum_probs=169.4

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~  147 (415)
                      +|+. +...++++.+|++.        ..+..+++++|++++..++.+++++||+|+++.|+|.+...    .+...|++
T Consensus        60 r~~~-p~~~~le~~lA~l~--------g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~  130 (398)
T PRK08249         60 RNTN-PTVQAFEEKVRILE--------GAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVD  130 (398)
T ss_pred             CCCC-hHHHHHHHHHHHHh--------CCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeE
Confidence            4444 45689999999998        24567788888999999999999999999999999987543    34567888


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      +..++.       .|++.+++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|+.....    .+
T Consensus       131 v~~vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~  196 (398)
T PRK08249        131 VTLCET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ----NP  196 (398)
T ss_pred             EEEcCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC----Cc
Confidence            776643       5899999999989999999999999999976   667888889999999999999864422    12


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      + ..+.+   +++.|+||.++.+|.++|++++.+       +++++.++.... .....++..+..+...++.     +.
T Consensus       197 l-~~~~D---ivv~S~sK~l~g~~~~~gG~vv~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t-----L~  260 (398)
T PRK08249        197 L-ALGAD---LVIHSATKFLSGHADALGGVVCGS-------KELMEQVYHYREINGATMDPMSAYLILRGMKT-----LK  260 (398)
T ss_pred             h-hhCCC---EEeccCceecCCCCCceEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch-----HH
Confidence            2 12222   778999999888887765544432       257777765543 3345677777766666654     67


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          307 KTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      .+.++..+++..+.+.|+..|.+..+.+|
T Consensus       261 ~R~~~~~~na~~la~~L~~~p~v~~V~yP  289 (398)
T PRK08249        261 LRVRQQQESAMALAKYLQTHPKVEAVYYP  289 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence            77788889999999999987665544444

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.95  E-value=9.1e-25  Score=208.76  Aligned_cols=335  Identities=14%  Similarity=0.100  Sum_probs=215.4

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-----CCCC-CCCCcHHHHH----HHHHHHhhhCCCCCCCCcE
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-----NGYA-PTAGLPLTRR----AIAEYLSRDLPYKLTPNDV  103 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~y~-~~~g~~~lr~----~ia~~~~~~~~~~~~~~~i  103 (415)
                      .+..++|..++      .++++.+++++.+.+.....     ..|. .......+++    .+++++    |  ++...|
T Consensus        24 ~~~~~~l~~~~------n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~----g--~~~~~i   91 (416)
T PRK00011         24 QEEHIELIASE------NFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELF----G--AEYANV   91 (416)
T ss_pred             HhcCeeeeccc------CcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceee
Confidence            46779999987      34678999998776432110     0111 1111223333    455554    3  345556


Q ss_pred             EEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH-----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEE
Q 014936          104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL-----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL  177 (415)
Q Consensus       104 ~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v  177 (415)
                      ++++ |++++..++.++.++||+|+++.|+|.++..     .+...|++++.+++++ +++.+|++++++++++ +++++
T Consensus        92 ~~~s-gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v  169 (416)
T PRK00011         92 QPHS-GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLI  169 (416)
T ss_pred             ecCC-chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEE
Confidence            5555 5779999999999999999999999976432     1233456777777643 2467999999999864 68888


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      ++++++++  ..   .++++|+++|+++|+++|+|++|.... +.+.....+.  .   ..+++.|+||++  +|.|.||
T Consensus       170 ~~~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~---~di~~~S~~K~l--~g~~gg~  237 (416)
T PRK00011        170 IAGASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--H---ADVVTTTTHKTL--RGPRGGL  237 (416)
T ss_pred             EECCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--C---CcEEEecCCcCC--CCCCceE
Confidence            88766554  33   357889999999999999999986432 2222122222  1   137789999974  6888999


Q ss_pred             EEeeCCCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          257 FVTTDPCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      +++++       +++.+.++......  .++....+.++..++.....+++++..++++++++.+.+.|+++ ++.+...
T Consensus       238 i~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~  309 (416)
T PRK00011        238 ILTND-------EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSG  309 (416)
T ss_pred             EEeCC-------HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeec
Confidence            99864       25777776553221  22222233333233322222457888899999999999999987 7763211


Q ss_pred             CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC-C-----CCCCeEEEEe------eCChhhHHHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA-V-----GLKNWLRVTF------AVDPYSLEECLDRIK  402 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~-----~~~~~iRi~~------~~~~~~l~~~l~~l~  402 (415)
                      ...++++|+.++...    .+..++ ...|+++||.+..+.. +     ..+..+|++.      +.++++++.+++.|+
T Consensus       310 ~~~~~~~~i~~~~~~----~~~~~~-~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~  384 (416)
T PRK00011        310 GTDNHLVLVDLRSKG----LTGKEA-EAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIA  384 (416)
T ss_pred             CCCCeEEEEeCcccC----CCHHHH-HHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHH
Confidence            233588888885321    134454 4455778999974321 1     1246799965      346899999999999


Q ss_pred             HHHHH
Q 014936          403 SFYQR  407 (415)
Q Consensus       403 ~~~~~  407 (415)
                      +++..
T Consensus       385 ~~~~~  389 (416)
T PRK00011        385 DVLDN  389 (416)
T ss_pred             HHHhc
Confidence            87664

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.95  E-value=1.2e-24  Score=203.39  Aligned_cols=227  Identities=18%  Similarity=0.189  Sum_probs=170.8

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g  145 (415)
                      +.+|+++ ...+|++.+|++.        ..+++++++|+++++.+++.+++++||+|+++.|+|......+    ...+
T Consensus        45 Y~R~~~p-~~~~le~~lA~l~--------g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~  115 (382)
T TIGR02080        45 YSRSGNP-TRDLLQQALAELE--------GGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC  115 (382)
T ss_pred             ccCCCCc-hHHHHHHHHHHHh--------CCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence            5677764 5689999999987        3568999999999999999999999999999999998655433    2234


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      .++..++.       .|++.+++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|..+...    
T Consensus       116 ~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----  181 (382)
T TIGR02080       116 FRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ----  181 (382)
T ss_pred             eEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence            55554421       3789999999889999999999999999976   567788888999999999999764422    


Q ss_pred             ccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      .++ .++.+   ++++|+||.++ .++++.|++++++       +++.+++..... .+...++.....+...++     
T Consensus       182 ~pl-~~gaD---ivv~S~sK~l~G~~~~~~G~i~~~~-------~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~-----  245 (382)
T TIGR02080       182 NPL-ALGAD---LVLHSCTKYLNGHSDVIAGAVIAKD-------PQVAEELAWWANNLGVTGGAFDSYLTLRGLR-----  245 (382)
T ss_pred             Cch-hhCCC---EEEeecceeccCCCCceeEEEEeCC-------HHHHHHHHHHHHccCCCCCHHHHHHHHcccc-----
Confidence            122 12222   88899999876 4778999988754       256666665533 345667776666655554     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      -+..+.++..+++..+.+.|+..|.+..+.+|
T Consensus       246 tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP  277 (382)
T TIGR02080       246 TLVARMRLQQRNAQAIVEYLQTQPLVKKIYYP  277 (382)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence            36666788889999999999987765544444

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.95  E-value=5.3e-25  Score=205.16  Aligned_cols=322  Identities=16%  Similarity=0.126  Sum_probs=211.9

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      .++||-.---.. .....+++++++++.+..++     |.   +..++++++++++++.+|    .+++++|+|+|+++.
T Consensus         8 ~~~ina~g~~t~-~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al~   74 (363)
T TIGR01437         8 KKVINASGKMTI-LGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGIA   74 (363)
T ss_pred             ceEEECCcEeec-CCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHHH
Confidence            455665433322 22245789999999998642     22   235677777777766555    357899999999999


Q ss_pred             HHHHHhcCCCC---------------EEEEcCCCCcch----HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCce
Q 014936          115 VAMALLSRPGA---------------NILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV  175 (415)
Q Consensus       115 ~~~~~l~~~gd---------------~vi~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  175 (415)
                      +++.+++++||               +|+++.|.|..+    ...+...|++++.++.    ++.+|+++++++++++|+
T Consensus        75 ~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~~~t~  150 (363)
T TIGR01437        75 QSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAITEKTA  150 (363)
T ss_pred             HHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcChhce
Confidence            99999999998               999999888755    4667788999988875    235899999999999999


Q ss_pred             EEE-ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936          176 ALV-IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       176 ~v~-i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      +++ +++|+||+|.+.+   +++|+++|+++|+++|+|++|+.-.      ..+..++.   .+++.|+||.+  +|++.
T Consensus       151 ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~---D~~~~S~~K~l--~gp~~  216 (363)
T TIGR01437       151 AILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGA---DLVIYSGAKAI--EGPTS  216 (363)
T ss_pred             EEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCC---CEEEEeCCccc--CCCce
Confidence            776 5678999999866   5678899999999999999997211      11122322   27778999974  67789


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHhhccc------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936          255 GWFVTTDPCGMFRKPKVVERMKKYFDI------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC  328 (415)
Q Consensus       255 G~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  328 (415)
                      |+++.++        ++++.++.....      .+..+..++.++...+...    ..+..+.+.++++.+.+.|+++|+
T Consensus       217 G~l~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~----~~~~~~~~~~~~~~l~~~L~~i~g  284 (363)
T TIGR01437       217 GLVLGKK--------KYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLST----GKESGAEMVAKLTPFIEALNTLKG  284 (363)
T ss_pred             EEEEEcH--------HHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHcc----CcccHHHHHHHHHHHHHHHhcCCC
Confidence            9988754        455555332211      0112223333333333221    123333444567789999999988


Q ss_pred             CcCCCC-CCCce---EEEEecCccccCCCCCHHHHHHHHHhhcC--eEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHH
Q 014936          329 ISCPHK-PEGSM---AVMLKLNLSLLDDIIDDIDFCFKLAKEES--VIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRI  401 (415)
Q Consensus       329 ~~~~~~-p~~g~---~~~~~l~~~~~~~~~~~~~~~~~ll~~~g--i~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l  401 (415)
                      +.+... +..+.   ...+.++... .+ .+..++...| ++++  |.+++  .+...+.+|+++ ..+++|++.++++|
T Consensus       285 ~~~~~~~~~~~~~~~~~~v~~~~~~-~g-~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l  359 (363)
T TIGR01437       285 VSASIVQDEAGRDIARAEIRFDESE-LG-MTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERI  359 (363)
T ss_pred             eEEEEecCCCCCcCceEEEEEeccC-CC-CCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHH
Confidence            874311 11111   1112232110 01 2566766665 5556  55554  455578999999 46789999999998


Q ss_pred             HHH
Q 014936          402 KSF  404 (415)
Q Consensus       402 ~~~  404 (415)
                      .++
T Consensus       360 ~~~  362 (363)
T TIGR01437       360 REI  362 (363)
T ss_pred             HHh
Confidence            875

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.95  E-value=2e-24  Score=201.31  Aligned_cols=227  Identities=15%  Similarity=0.173  Sum_probs=175.4

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g  145 (415)
                      +.+|+++ ....|++++|++.        ..+++++++|+++++.+++.+++++||+|+++.|+|......    +...|
T Consensus        47 Y~R~~np-t~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g  117 (388)
T PRK08861         47 YTRSGNP-NRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD  117 (388)
T ss_pred             ccCCCCc-hHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC
Confidence            4566664 5789999999998        368999999999999999999999999999999999864433    23456


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.       .|++++++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|....+.    
T Consensus       118 i~v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~----  183 (388)
T PRK08861        118 FKVQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ----  183 (388)
T ss_pred             eEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence            77777642       4789999999889999999999999999987   557777888999999999999864422    


Q ss_pred             ccccccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      .++ .++.+   +++.|++|.++.+ +...|++++++       +++.+.++... ......+|.....+..-|+.    
T Consensus       184 ~pl-~~GaD---ivv~S~tK~l~G~~d~~gG~i~~~~-------~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T----  248 (388)
T PRK08861        184 KPL-ELGAD---FVIHSTTKYINGHSDVIGGVLITKT-------KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT----  248 (388)
T ss_pred             CCc-ccCCC---EEEeecceeccCCCcceeEEEEecH-------HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC----
Confidence            122 23333   8889999997654 47788887754       24666665543 33456678887877777776    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                       +.-+.++..+++..+.+.|+..|.+..+.+|
T Consensus       249 -l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP  279 (388)
T PRK08861        249 -LGARMRVHEESAQQILAYLQTQSLVGTIYHP  279 (388)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence             7778888899999999999988776545455

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.95  E-value=1.4e-24  Score=204.37  Aligned_cols=333  Identities=13%  Similarity=0.092  Sum_probs=229.7

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~  111 (415)
                      +++.++|+..|.-.  .+++.+|++++++.+++....  .+++ ....++++.+++.+..      .++ .+++++++++
T Consensus        27 dg~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGse   95 (375)
T PRK04260         27 DGKKYLDFSSGIGV--TNLGFHPQVQQALQKQAGLIW--HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAE   95 (375)
T ss_pred             CCCEEEECCCCccc--ccCCCCHHHHHHHHHHHHhcC--cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHH
Confidence            47789999877422  235668999999999887532  2332 2356789999998742      234 4689999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchH-HHHHhCCCeEE------EeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYE-LSAAFRHIEVR------HFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~-~~~~~~g~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  182 (415)
                      ++..+++...  .++++|++.+.+|++.. ..+...|.+..      .++..+... ..|++.+++.+++++.++++..+
T Consensus        96 A~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dl~~l~~~l~~~~a~vi~e~v  174 (375)
T PRK04260         96 ANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI-FNDLNSVKALVNKNTAAVMLELV  174 (375)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC-CCCHHHHHHhcCCCeEEEEECCe
Confidence            9998888763  34578888888888643 33222222110      000000001 14789999988777777888888


Q ss_pred             CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      +|++|... +.+.++++.++|+++|+++|+||+|.++...+... .....+..++   +.||||.+ .+|+|+||+++++
T Consensus       175 ~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l-~~G~~ig~~~~~~  249 (375)
T PRK04260        175 QGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGL-ANGVPVGAMLAKS  249 (375)
T ss_pred             ECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEecccc-cCCcceEEEEEcH
Confidence            99999874 56789999999999999999999998765544322 2112222222   33899996 4789999999975


Q ss_pred             CCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          262 PCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                              ++.+.+... ...+.+.+++.+.++.++|+... ++..++.++..+..++.+.+.+.+.+.+. . .+..|+
T Consensus       250 --------~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~g~  319 (375)
T PRK04260        250 --------SLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVT-T-VRGLGY  319 (375)
T ss_pred             --------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCee-E-Eeccce
Confidence                    566666543 23346678889999999986543 35566677777777777777776664333 2 345799


Q ss_pred             EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936          340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF  404 (415)
Q Consensus       340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~  404 (415)
                      ++|++++.       +..++...+ .++||.+.|+.    .+.+|+++  ..+++++++++++|+++
T Consensus       320 ~~~~~~~~-------~~~~~~~~l-~~~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~  374 (375)
T PRK04260        320 MIGIETTA-------DLSQLVEAA-RDKGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV  374 (375)
T ss_pred             EEEEEecC-------cHHHHHHHH-HhCCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence            99998842       355666655 56799998753    47899999  36899999999999765

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.94  E-value=3.6e-24  Score=199.24  Aligned_cols=314  Identities=15%  Similarity=0.103  Sum_probs=212.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL  128 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi  128 (415)
                      +..++.+.++......  ....|+.  ..+...||+.||++.        ..+++++++|+++|+..++.+++++||+|+
T Consensus        35 ~~~~~~~~~~~~~~~~--~~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv  104 (394)
T PRK09028         35 FDTVAEMRHAAKNRAN--GEMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL  104 (394)
T ss_pred             cCCHHHHHHHhccCcc--CCceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence            4445555554433211  1124544  235679999999986        335789999999999999999999999999


Q ss_pred             EcCCCCcchHHHH----HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          129 LPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       129 ~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +++|.|.++...+    ...|+++..++.       .+.+.+++++++++++|++.+|+||||.+   .++++|+++|++
T Consensus       105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~-------~~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~~la~~  174 (394)
T PRK09028        105 MVDSCYEPTRDLCDKILKGFGIETTYYDP-------MIGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLSRIAHE  174 (394)
T ss_pred             EECCCcHHHHHHHHHhhhhcceEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHH
Confidence            9999998876543    457888776642       14578899998899999999999999888   889999999999


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhc-ccc
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYF-DIL  282 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~  282 (415)
                      +|+++++|++|+...    ...++ .++.+   +++.|.+|.++.+ ++-.|+++.++        ++.+.+.... ...
T Consensus       175 ~g~~lvvD~t~a~p~----~~~Pl-~~GaD---ivv~S~tK~l~Gh~d~~~G~~~~~~--------~~~~~l~~~~~~~G  238 (394)
T PRK09028        175 HDIVVMLDNTWASPI----NSRPF-EMGVD---ISIQAATKYIVGHSDVMLGTATANE--------KHWDQLREHSYLMG  238 (394)
T ss_pred             cCCEEEEECCccccc----cCCcc-ccCce---EEEEeCCeEecCCCCEEEEEEECCH--------HHHHHHHHHHHhcC
Confidence            999999999998632    11222 23443   8999999998665 46667655432        4555555432 334


Q ss_pred             CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecC
Q 014936          283 GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLN  346 (415)
Q Consensus       283 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~  346 (415)
                      ...++.....+..-|+.     +.-+.++..+++..+.+.|++.|.+..+.+|.                .|-.+.+.++
T Consensus       239 ~~~~p~~a~l~~rgl~T-----L~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~  313 (394)
T PRK09028        239 QCTSPDDVYLAMRGLRT-----LGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK  313 (394)
T ss_pred             CCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence            56788877777777765     78888999999999999999888766555552                2334555564


Q ss_pred             ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-------------------CCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-------------------LKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ..   +......|+..+ +-..+.++-|....                   .++.||+|++..  +.+.+++.|.++++.
T Consensus       314 ~~---~~~~~~~f~~~l-~l~~~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~~liR~svGlE--d~~dLi~Dl~~Al~~  387 (394)
T PRK09028        314 QG---DPKAVTALVEGM-QHFKMGFSWGGFESLILGVFGINKLRTATNWDFSKPLIRLHIGLE--DVDDLIADLEAGFER  387 (394)
T ss_pred             CC---CHHHHHHHHHhC-CcceEecccCCCcceeECCCCcCccCchhhhcCCCCeEEEEeCcC--CHHHHHHHHHHHHHH
Confidence            21   001122333332 22222222222111                   025699999874  466666777777766


Q ss_pred             HHHH
Q 014936          408 HAKQ  411 (415)
Q Consensus       408 ~~~~  411 (415)
                      +...
T Consensus       388 ~~~~  391 (394)
T PRK09028        388 YNAV  391 (394)
T ss_pred             HHHH
Confidence            5544

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.94  E-value=1.7e-24  Score=203.76  Aligned_cols=227  Identities=16%  Similarity=0.141  Sum_probs=174.4

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~----~~~~~~~~g  145 (415)
                      +.+|+++ ...+|++.+|++.        ..++.+++++|+.++..++.++.++||+|+++...|.+    +...++..|
T Consensus        64 Y~r~~~p-~~~~le~~lA~l~--------g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G  134 (403)
T PRK07810         64 YSRYGNP-TVSMFEERLRLIE--------GAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWG  134 (403)
T ss_pred             eeCCCCc-hHHHHHHHHHHHh--------CCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence            4566764 4789999999998        34588899999999999999999999999999866644    345567789


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.       .|++++++++++++++|++.+|+||+|.+.   ++++|+++|+++|+++|+|++|+...+..   
T Consensus       135 ~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~~~~---  201 (403)
T PRK07810        135 VETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPLLQR---  201 (403)
T ss_pred             cEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence            99988864       388999999998999999999999999995   58888888999999999999998654321   


Q ss_pred             ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                       ++ .++.   .+++.|++|.++..|.++ |++++++ .      .+.+.++.. .......++..+..+...|+.    
T Consensus       202 -~~-~~ga---Divv~S~tK~l~g~g~~~gG~v~~~~-~------~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t----  265 (403)
T PRK07810        202 -GL-PLGA---DVVVYSGTKHIDGQGRVLGGAILGDR-E------YIDGPVQKLMRHTGPALSAFNAWVLLKGLET----  265 (403)
T ss_pred             -hh-hcCC---cEEEccCCceecCCcCceeEEEEeCh-H------HHHHHHHHHHHHhCCCCCHHHHHHHHhccCc----
Confidence             11 2232   388899999998889887 6666544 1      132334433 233456788888887777765    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                       +..+.++..++...+.+.|++.|.+..+.+|
T Consensus       266 -l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP  296 (403)
T PRK07810        266 -LALRVRHSNASALRIAEFLEGHPAVRWVRYP  296 (403)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence             7788888888999999999988877655444

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.94  E-value=2e-24  Score=202.16  Aligned_cols=285  Identities=14%  Similarity=0.136  Sum_probs=203.0

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~  147 (415)
                      +|++ +...+|++.++++.        ..+..+++++|++|+..++.+++++||+|+++.++|+.....    +...|++
T Consensus        36 r~~~-p~~~~le~~la~l~--------g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~  106 (369)
T cd00614          36 RIGN-PTVDALEKKLAALE--------GGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIE  106 (369)
T ss_pred             CCCC-hhHHHHHHHHHHHH--------CCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeE
Confidence            3444 56789999999987        235778888899999999999999999999999999886543    4567888


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      +..++.+       |++++++++++++++|++.+|+||+|.+.+   +++|+++|+++|+++|+|++|+...+.    .+
T Consensus       107 ~~~v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~  172 (369)
T cd00614         107 VTFVDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RP  172 (369)
T ss_pred             EEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Ch
Confidence            8877642       589999999888999999999999999965   778888999999999999999864431    11


Q ss_pred             ccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHH
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      + .++.   .+++.|++|.++.+| .+.||+++++       .++++.++... ......++....++...|+.     +
T Consensus       173 ~-~~g~---Divv~S~tK~l~g~~~~~gG~v~~~~-------~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t-----l  236 (369)
T cd00614         173 L-ELGA---DIVVHSATKYIGGHSDVIAGVVVGSG-------EALIQRLRFLRLALGTILSPFDAWLLLRGLKT-----L  236 (369)
T ss_pred             h-hhCC---cEEEeccceeccCCCCceEEEEEeCc-------HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC-----H
Confidence            1 1222   388999999987766 7899999854       14666666553 23455677766666666653     5


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC----------------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCe
Q 014936          306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP----------------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV  369 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi  369 (415)
                      ..+.++..+++..+.+.|++.|++..+.+|                ..|..+.+.++.        +.+....++..-++
T Consensus       237 ~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~--------~~~~~~~f~~~l~~  308 (369)
T cd00614         237 PLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG--------GLEAAKKFLNALKL  308 (369)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC--------CHHHHHHHHHcCCc
Confidence            667788889999999999988766544445                235566666642        11223333343343


Q ss_pred             E---EEcCCCC----------------------CC-CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          370 I---ILPGTAV----------------------GL-KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       370 ~---v~~g~~~----------------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                      .   ++-|...                      +. ++-+|+|++.  |+.+.+++.|.+++
T Consensus       309 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl--E~~~dl~~dl~~al  368 (369)
T cd00614         309 FSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI--EDVEDLIADLEQAL  368 (369)
T ss_pred             ceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence            3   2222211                      11 3579999987  46677777777664

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK07505 hypothetical protein; Provisional

Probab=99.94  E-value=2.1e-24  Score=204.97  Aligned_cols=332  Identities=14%  Similarity=0.117  Sum_probs=205.5

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCC-----CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYA-----PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~y~-----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      .+|+.++||..++   ..++..+|++.+++.+++.... .....     ......++++.+++++    +  .   +.++
T Consensus        43 ~~g~~~ld~~s~~---~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~---~~~~  110 (402)
T PRK07505         43 ADGHTFVNFVSCS---YLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G--A---SVLT  110 (402)
T ss_pred             cCCceEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C--C---CEEE
Confidence            3478899998764   2234568999999999887411 11111     1123456666666665    2  2   5555


Q ss_pred             eCChHHHHHHHHHHhc----CCCC-EEEEcCCCCcchH---HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          106 TSGCTQAIDVAMALLS----RPGA-NILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~----~~gd-~vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      ++++++++..++..+.    .+|+ .|++.+..|++..   ......+.++..+++       .|++.++++++++++++
T Consensus       111 ~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~  183 (402)
T PRK07505        111 FTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVA  183 (402)
T ss_pred             ECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEE
Confidence            5566778887776543    2232 3556655554322   112223556666654       37899999887778899


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccC--CCCCeEEEccCccccCCCCceE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFG--STVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~--~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      ++++|+||+|.+++   +++|.++|+++|+++|+||+|+...++..+.. ....++  ..++++++.|+||.|+++|   
T Consensus       184 vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---  257 (402)
T PRK07505        184 YVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---  257 (402)
T ss_pred             EEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---
Confidence            99999999999987   67777888899999999999976544322211 112223  2456899999999998877   


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936          255 GWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC  331 (415)
Q Consensus       255 G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  331 (415)
                      ||+++++       +++.+.+.....   +..++++.+..++.+.++...++++.+..+.++++.+.+...+...     
T Consensus       258 g~~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----  325 (402)
T PRK07505        258 GVIMLGD-------AEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----  325 (402)
T ss_pred             eEEEeCC-------HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----
Confidence            8876543       257777665422   1224455677777666652222344455566666655543332111     


Q ss_pred             CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936          332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~  406 (415)
                      . .....++.++.++..     ....++...++ +.||.+.++..+..   .++|||++.  .++++++++++.|+++++
T Consensus       326 ~-~g~~~~i~~~~~~~~-----~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~  398 (402)
T PRK07505        326 Q-SGSFLPIRLIYIGDE-----DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD  398 (402)
T ss_pred             C-CCCCCCEEEEEeCCH-----HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence            1 111112223322210     12455666664 67999998754432   268999996  699999999999998876


Q ss_pred             H
Q 014936          407 R  407 (415)
Q Consensus       407 ~  407 (415)
                      +
T Consensus       399 ~  399 (402)
T PRK07505        399 E  399 (402)
T ss_pred             h
Confidence            4

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.94  E-value=1e-24  Score=210.08  Aligned_cols=326  Identities=19%  Similarity=0.201  Sum_probs=216.0

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHH---hhhCCCCCCCCcEEEeCChH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYL---SRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~~---~~~~~~~~~~~~i~i~~g~~  110 (415)
                      ...+++.|.++    +..+..+.++....-   ....|.+.  .....+++.++++.   .+..|  ++.+++++++|++
T Consensus        69 ~~~~lg~g~~~----~~~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t  139 (447)
T PRK00451         69 YPSFLGAGAYD----HYIPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGAT  139 (447)
T ss_pred             CcccCcccccC----CcCcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHH
Confidence            56788888754    444555555443321   11234330  12344665555333   55555  4566899999999


Q ss_pred             HHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHh----CCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936          111 QAIDVAMALLS-RPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP  185 (415)
Q Consensus       111 ~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np  185 (415)
                      +++..++.++. .+||+|+++.+.|+.+...++.    .|.+++.++.++  + .+|++++++.++++++++++++| ||
T Consensus       140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~  215 (447)
T PRK00451        140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF  215 (447)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence            99999988874 7899999999999988776554    689999998754  3 68999999999989999999999 89


Q ss_pred             cccCCCHHHHHHHHHHHhhcCcEEEE--ccccCCcccCCCCcccccccCCCCCeEEEc---cCccccCCCCceEEEEEee
Q 014936          186 CGNVYSYQHLQKLAETANKLKTLVIA--DEVYGHLVFGDKPFVPMGVFGSTVPILTLG---SLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       186 tG~~~~~~~l~~i~~~~~~~~~~li~--De~~~~~~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~~~~G~r~G~~~~~  260 (415)
                      ||.+   .++++|+++|+++|+++++  |.+.....     . ....++.+   ++++   ++||.+.++|+++||++++
T Consensus       216 tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g~~-----~-~~~~~~~D---~~~~s~~k~~~~~~~~Gpg~G~l~~~  283 (447)
T PRK00451        216 FGVI---EDLEEIAEIAHAGGALFIVGVDPVSLGLL-----K-PPGEYGAD---IVVGEGQPLGIPLSFGGPYLGFFATR  283 (447)
T ss_pred             CCee---CCHHHHHHHHHHCCCEEEEEcChHHhccC-----C-CcccCCCC---EEEECCCcCCCCCCCCCCCchHHHhh
Confidence            9999   5688889999999999988  54322111     0 11122222   4444   6777777889999999875


Q ss_pred             CCCCCCChHHHHHHH----------------------------Hhhccc-cCCchhHHH-HHHHHhhCCCcHHHHHHHHH
Q 014936          261 DPCGMFRKPKVVERM----------------------------KKYFDI-LGDPATFIQ-AAVPSILQQPDEVFFKKTLN  310 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~----------------------------~~~~~~-~~~~~~~~~-~a~~~~l~~~~~~~~~~~~~  310 (415)
                      +        ++.+.+                            +..... +...+...+ .++...+....+..+++..+
T Consensus       284 ~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~  355 (447)
T PRK00451        284 K--------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE  355 (447)
T ss_pred             H--------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence            4        344432                            111111 111122222 33333333233577899999


Q ss_pred             HHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE--EecCccccCCCCCHHHHHHHHHhhcCeEE-EcCCCCC--CCCeEEE
Q 014936          311 LLKQSVDICYNKIKEIPCISCPHKPEGSMAVM--LKLNLSLLDDIIDDIDFCFKLAKEESVII-LPGTAVG--LKNWLRV  385 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~--~~l~~~~~~~~~~~~~~~~~ll~~~gi~v-~~g~~~~--~~~~iRi  385 (415)
                      ++.++++++.+.|++++++. + . .++.|.+  ++++.       +..++..+|+++ ||.+ .++..+.  ..+++|+
T Consensus       356 ~~~~~~~~l~~~L~~~~g~~-~-~-~~~~~~~~~v~~~~-------~~~~~~~~L~~~-gi~~~~~~~~~~~~~~~~~rv  424 (447)
T PRK00451        356 QNHQKAHYLAERLAEIGGVE-L-F-DGPFFNEFVVRLPK-------PAEEVNEALLEK-GILGGYDLGRYYPELGNHLLV  424 (447)
T ss_pred             HHHHHHHHHHHHHhhcCCEE-e-c-CCCeEEEEEEecCC-------CHHHHHHHHHhc-CCCCCcccccccCCcCCEEEE
Confidence            99999999999999987887 3 2 3344433  44421       456777777654 6653 3444443  2579999


Q ss_pred             Eee--CChhhHHHHHHHHHHHH
Q 014936          386 TFA--VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       386 ~~~--~~~~~l~~~l~~l~~~~  405 (415)
                      ++.  .++++++++++.|++++
T Consensus       425 s~~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        425 CVTEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             ecCCCCCHHHHHHHHHHHHHHh
Confidence            994  68899999999998654

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=2.9e-24  Score=201.68  Aligned_cols=225  Identities=18%  Similarity=0.157  Sum_probs=166.3

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~  147 (415)
                      +|+. ....+|++.+|++.+        .+..++++++++|+.+++.+++++||+|+++.|+|......+.    ..|++
T Consensus        57 r~~~-p~~~~Le~~lA~~~g--------~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~  127 (388)
T PRK07811         57 RTGN-PTRTALEEQLAALEG--------GAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVE  127 (388)
T ss_pred             CCCC-ccHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeE
Confidence            3444 568899999999983        2334556677999999999999999999999999996544332    35777


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      +..++.       .|++++++++++++++|++++|+||+|.+   .++++|+++|+++|+++|+|++|+.....    .+
T Consensus       128 ~~~~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~p  193 (388)
T PRK07811        128 YTPVDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQ----QP  193 (388)
T ss_pred             EEEeCC-------CCHHHHHHhcCcCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccC----Cc
Confidence            766643       48999999998899999999999999988   67888999999999999999999864421    12


Q ss_pred             ccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHHH
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      +. .+.+   +++.|++|.++.+| .+.||++++++       ++.+.++..... ....++.....+...|+.     +
T Consensus       194 ~~-~gaD---ivv~S~sK~l~g~~~~~gG~vv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t-----l  257 (388)
T PRK07811        194 LA-LGAD---VVVHSTTKYIGGHSDVVGGALVTNDE-------ELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT-----L  257 (388)
T ss_pred             hh-hCCc---EEEecCceeecCCCCcEEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----H
Confidence            21 2222   88999999988754 57899887642       465655544332 334455555555555543     6


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ..+.++..++...+.+.|+..|++..+.+|
T Consensus       258 ~~R~~~~~~na~~la~~L~~~p~v~~V~yP  287 (388)
T PRK07811        258 AVRMDRHSENAEAVAEFLAGHPEVSTVLYP  287 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence            677788888999999999988776544444

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.94  E-value=3e-24  Score=202.37  Aligned_cols=226  Identities=18%  Similarity=0.205  Sum_probs=167.3

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g  145 (415)
                      +.+|+. +...+|++.++++.+        .+..+++++|++++.+++.+++++||+|+++.|+|....    ..+...|
T Consensus        59 y~r~~~-p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G  129 (403)
T PRK07503         59 YSRISN-PTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFG  129 (403)
T ss_pred             eeCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCC
Confidence            345555 357899999999872        234677778899999999999999999999999997643    3455688


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.       .|++.+++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|+.....    
T Consensus       130 ~~v~~vd~-------~d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~----  195 (403)
T PRK07503        130 VTVRHVDL-------TDPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ----  195 (403)
T ss_pred             EEEEEeCC-------CCHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence            88888765       2789999999889999999999999999954   788888889999999999999864321    


Q ss_pred             ccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--cc-ccCCchhHHHHHHHHhhCCCc
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--FD-ILGDPATFIQAAVPSILQQPD  301 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~a~~~~l~~~~  301 (415)
                      .++ .++.   .+++.|+||.++.+| .+.|+++.++        +++++++..  .. .....++..+..+...|+.  
T Consensus       196 ~~l-~~g~---Di~v~S~tK~l~g~gd~~gG~v~~~~--------~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t--  261 (403)
T PRK07503        196 RPL-ELGA---DLVVHSATKYLGGHGDITAGLVVGGK--------ALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT--  261 (403)
T ss_pred             Cch-hhCC---CEEEccccccccCCCceeEEEEEcCH--------HHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch--
Confidence            122 1222   288999999988765 7788887533        576766532  22 2345666666666555543  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                         +..+.++..++...+.+.|+..|.+..+.+|
T Consensus       262 ---l~~r~~~~~~na~~~a~~L~~~p~v~~V~~P  292 (403)
T PRK07503        262 ---LALRMDRHCASAQAVAEWLARHPAVELVHYP  292 (403)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence               6666677778888888899887765534333

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.94  E-value=4.9e-24  Score=200.20  Aligned_cols=226  Identities=13%  Similarity=0.144  Sum_probs=167.3

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g  145 (415)
                      +.+|+++ ...+|++.+|++.+        .+..+++++|++++..++.+++++||+|+++.|.|....    ..+...|
T Consensus        53 y~r~~~p-~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G  123 (391)
T TIGR01328        53 YSRLGNP-TVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFG  123 (391)
T ss_pred             eeCCCCc-hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCC
Confidence            4456654 56889999999983        345788888899999999999999999999999887543    3445678


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.+       |++++++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|+.....    
T Consensus       124 ~~~~~vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~----  189 (391)
T TIGR01328       124 IQVDFINMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT----  189 (391)
T ss_pred             eEEEEECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC----
Confidence            888887652       789999999889999999999999999965   777888888999999999999864331    


Q ss_pred             ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhc--c-ccCCchhHHHHHHHHhhCCCc
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF--D-ILGDPATFIQAAVPSILQQPD  301 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~a~~~~l~~~~  301 (415)
                      .++ ....+   +++.|++|.++.+|.++ |++++++        ++++.++...  . .....++.....+...|+.  
T Consensus       190 ~~~-~~g~D---ivv~S~sK~lgg~g~~~gG~v~~~~--------~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t--  255 (391)
T TIGR01328       190 NPV-ALGVD---VVVHSATKYIGGHGDVVAGLICGKA--------ELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT--  255 (391)
T ss_pred             Cch-hcCCC---EEEccccccccCCCCceEEEEEcCH--------HHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc--
Confidence            122 12222   78899999999888875 5554432        5666666432  1 1234555555555555543  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                         +..+.++..++...+.+.|+..|++..+.+|
T Consensus       256 ---l~~r~~~~~~na~~la~~L~~~p~v~~v~yp  286 (391)
T TIGR01328       256 ---LNIRMKRHSENAMKVAEYLKSHPAVEKVYYP  286 (391)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence               5667788888999999999988776544444

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK06460 hypothetical protein; Provisional

Probab=99.94  E-value=3.4e-24  Score=200.37  Aligned_cols=224  Identities=15%  Similarity=0.102  Sum_probs=159.8

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCc----chHHHHHhCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP----IYELSAAFRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~----~~~~~~~~~g~~  147 (415)
                      ++.+ ....+|++.+|++.+      .. ..+ ++++|++++..++.+++++||+|+++.|.|.    .+...++..|++
T Consensus        41 r~~~-p~~~~L~~~lA~l~g------~~-~~v-~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~  111 (376)
T PRK06460         41 REAN-PTVLELTKKIVELEN------AE-MGV-AFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVN  111 (376)
T ss_pred             CCCC-ccHHHHHHHHHHHhC------CC-cEE-EeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence            3344 577999999999983      22 344 4466679999999999999999999987654    445667888999


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      +..++.+       +.+.+++.+++++++|++++|+||||.+++.   ++|+++|+++|+++|+|++|+... .   ..+
T Consensus       112 v~~~~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~~-~---~~~  177 (376)
T PRK06460        112 VDASNPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVDI---TELSKVCKENGSILIVDATFSTPI-N---QKP  177 (376)
T ss_pred             EEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcCccc-c---CCh
Confidence            8877642       2244555556789999999999999999875   467788889999999999997532 1   111


Q ss_pred             ccccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHH
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      + ..   +..+++.|+||.|+.. +.++||+++++        ++++.++.... .+.+.++..   +..+++.  .+++
T Consensus       178 l-~~---~~divv~S~sK~l~G~~~~~~G~~~~~~--------~l~~~l~~~~~~~g~~~~~~~---a~~~l~~--~~~l  240 (376)
T PRK06460        178 L-EL---GADIVVHSASKFLAGHNDVIAGLAAGYG--------KLLNVIDQMRRTLGTSLDPHA---AYLTLRG--IKTL  240 (376)
T ss_pred             h-hc---CCCEEEeecceeccCCCCceEEEEecCH--------HHHHHHHHHHHhcCCCCCHHH---HHHHHhc--hhhH
Confidence            1 11   2348899999997533 37899998754        67777765533 233334432   2233332  3678


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +.+++++.++++.+.+.|++.|.+..+.+|
T Consensus       241 ~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp  270 (376)
T PRK06460        241 KIRMDVINRNAEQIAEFLEGHPKVVKVYYP  270 (376)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence            889999999999999999988776544454

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.94  E-value=5e-24  Score=201.50  Aligned_cols=334  Identities=18%  Similarity=0.160  Sum_probs=218.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +++.++||..|.-....+. .+|.+.+++.+++.....  ..|+. ....+|.+.++++.        ..+.++++++|+
T Consensus        33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~la~~L~~~~--------~~~~~~f~~SGs  102 (397)
T TIGR03246        33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGYTN-EPVLRLAKKLVDAT--------FADKVFFCNSGA  102 (397)
T ss_pred             CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCccCC-HHHHHHHHHHHhhC--------CCCEEEEeCCcH
Confidence            4788999988742222233 489999999998875221  12221 22345555555543        246999999999


Q ss_pred             HHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHh-CCC------------eEEEeeccCCCCCCCChhHHHhh
Q 014936          111 QAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAF-RHI------------EVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus       111 ~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~-~g~------------~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      +|+..+++...       ++| +.|+..+-+|++....+.. .+.            .+..++.       .|++.+++.
T Consensus       103 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  175 (397)
T TIGR03246       103 EANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKAL  175 (397)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHH
Confidence            99999999862       122 5678888788776544332 221            1111211       378999999


Q ss_pred             cCCCceEEEecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936          170 ADQNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI  248 (415)
Q Consensus       170 ~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  248 (415)
                      +.+++.+|++..++++.|.. .+.+.+++|.++|++||+++|+||+|.++...|... ....++....   +.++||.++
T Consensus       176 l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD---i~t~~K~lg  251 (397)
T TIGR03246       176 ISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---ILTSAKALG  251 (397)
T ss_pred             hccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC---EEEeehhhh
Confidence            87776666665445566655 388999999999999999999999998776555432 1122222222   337899975


Q ss_pred             CCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                       +|+++||+++++        ++.+.+.... ..+++.+++.+.++.+.|+...   -++..++++++.+++.+.|+++.
T Consensus       252 -gG~pigav~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~  319 (397)
T TIGR03246       252 -GGFPIGAMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKIN  319 (397)
T ss_pred             -CCcceeEEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHH
Confidence             789999999975        5777765432 2345678888888888886421   23566778888888888887652


Q ss_pred             C-CcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936          328 C-ISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS  403 (415)
Q Consensus       328 ~-~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~  403 (415)
                      . ...+ ..+..|.++.+.+....   ......++..+ .++||.+.+..    .+++|+++  ..+++++++++++|.+
T Consensus       320 ~~~~~~~~vrg~G~~~~i~~~~~~---~~~~~~~~~~l-~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~  391 (397)
T TIGR03246       320 ARYNVFSEIRGKGLLIGAVLTEAY---QGKAKQFVNAA-AEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFER  391 (397)
T ss_pred             hcCCCeEeeecCceEEEEEEcCch---hhHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence            1 1111 12334555555553210   01245566655 56699987632    37899966  5789999999999998


Q ss_pred             HHHH
Q 014936          404 FYQR  407 (415)
Q Consensus       404 ~~~~  407 (415)
                      ++.+
T Consensus       392 ~l~~  395 (397)
T TIGR03246       392 AIEQ  395 (397)
T ss_pred             HHHH
Confidence            8865

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.94  E-value=5.2e-24  Score=199.92  Aligned_cols=327  Identities=16%  Similarity=0.111  Sum_probs=207.1

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC-------CCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-------KFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTP  100 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~-------~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~  100 (415)
                      +..+++|++++   +.++..++.+++++.+++...       .....+      ...-+.++|+.+|++++      . +
T Consensus         3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~   72 (370)
T PRK05937          3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-P   72 (370)
T ss_pred             CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-C
Confidence            45689999999   777888888988888876542       111111      22346788888999883      2 3


Q ss_pred             CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------Cc
Q 014936          101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT  174 (415)
Q Consensus       101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~  174 (415)
                      +.+++++| +.++..++..+.++||.|+++.-.|.+....++........+++       .|+++|++.+++      .+
T Consensus        73 ~~l~~~sG-~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~  144 (370)
T PRK05937         73 EAFIVPSG-YMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFGR  144 (370)
T ss_pred             eEEEECCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCCc
Confidence            34555555 45666666666678899999899998888777665433333432       578988887752      35


Q ss_pred             eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      .++++++++|++|.+.|   +++|+++|+++|+++++|++|+.+.++.........+...+..+.+.||||.++..|   
T Consensus       145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---  218 (370)
T PRK05937        145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---  218 (370)
T ss_pred             EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---
Confidence            56678899999999976   778888888999999999999975544222111111222222366789999998877   


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936          255 GWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC  331 (415)
Q Consensus       255 G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  331 (415)
                      +.++..+        +..+.+...   ..+..+.++....++.++++...+. .+..+++++++++++.+.|... +   
T Consensus       219 ~~vl~~~--------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-~~~~~~~l~~l~~~l~~~l~~~-~---  285 (370)
T PRK05937        219 AALLSSS--------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-GELARKQLFRLKEYFAQKFSSA-A---  285 (370)
T ss_pred             eEEEcCH--------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhcCCC-C---
Confidence            3334322        344443321   1223445666666555555432111 2345677788888888777542 1   


Q ss_pred             CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936          332 PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       332 ~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                         +.....  +.++.      .....+ ...|.++||.+.... +...+++|++++  ++++|++.+++.|.++++++-
T Consensus       286 ---~~~~~~--i~~~~------~~~~~~-~~~L~~~gi~v~~~~-~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~  352 (370)
T PRK05937        286 ---PGCVQP--IFLPG------ISEQEL-YSKLVETGIRVGVVC-FPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ  352 (370)
T ss_pred             ---CCCEEE--EEeCC------hhHHHH-HHHHHHCCeeEEeeC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence               111111  22332      123444 444577799886422 122578999995  789999999999999887754


Q ss_pred             H
Q 014936          410 K  410 (415)
Q Consensus       410 ~  410 (415)
                      +
T Consensus       353 ~  353 (370)
T PRK05937        353 K  353 (370)
T ss_pred             C
Confidence            3

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.94  E-value=6.5e-24  Score=199.12  Aligned_cols=226  Identities=20%  Similarity=0.241  Sum_probs=168.6

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g  145 (415)
                      +.+|++ ....++++.+++++        ..+.+++++||++++..++.+++++||+|+++.+.|.+..    ..+...|
T Consensus        48 y~r~~~-p~~~~le~~la~l~--------g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g  118 (380)
T TIGR01325        48 YSRYAN-PTVAAFEERIAALE--------GAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFG  118 (380)
T ss_pred             eecCCC-chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhC
Confidence            345665 35789999999987        2357889999999999999999999999999999887633    3566789


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.       .|++.+++++++++++|++++|+||+|.+.   ++++|+++|+++|+++|+|++|+...+.  . 
T Consensus       119 ~~v~~v~~-------~d~~~l~~~i~~~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~~~--~-  185 (380)
T TIGR01325       119 IEVSFVDP-------TDLNAWEAAVKPNTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPVLQ--Q-  185 (380)
T ss_pred             CEEEEECC-------CCHHHHHHhcCCCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC--C-
Confidence            99888764       268999999988899999999999999995   5788888889999999999999864322  1 


Q ss_pred             ccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                       ++ .++.   .+++.|++|.++.+|.++ |++++++        ++++.++... ......++....++...++     
T Consensus       186 -pl-~~g~---Divv~S~sK~l~g~g~~~gG~vv~~~--------~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~-----  247 (380)
T TIGR01325       186 -PL-KLGA---DVVVYSATKHIDGQGRVMGGVIAGSE--------ELMAEVAVYLRHTGPAMSPFNAWVLLKGLE-----  247 (380)
T ss_pred             -ch-hhCC---CEEEeeccceecCCCCeEEEEEEeCH--------HHHHHHHHHHHhhCCCCCHHHHHHHHhccC-----
Confidence             22 2233   277889999998888887 5555543        4666666543 2233445555444444443     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      .+..+.++..+++..+.+.|+++|.+..+.+|
T Consensus       248 tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp  279 (380)
T TIGR01325       248 TLSLRMQKQFDSALAIAEWLQAQPQVQAVYYP  279 (380)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence            36667888888999999999988776544444

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PLN00144 acetylornithine transaminase

Probab=99.94  E-value=4.1e-24  Score=200.43  Aligned_cols=342  Identities=15%  Similarity=0.129  Sum_probs=219.0

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-.... --.+|++.+++++++.....  +.. ....+....+|+.+.+..    ..+.++++++|++
T Consensus        12 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse   83 (382)
T PLN00144         12 VEGKEYLDMAAGIAVNAL-GHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE   83 (382)
T ss_pred             CCCCEEEECCcCHHhccC-CCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence            358899999877522111 12479999999999875322  111 112344455555554321    2469999999999


Q ss_pred             HHHHHHHHhc---C-C-----------CCEEEEcCCCCcchHHHHHhCCCeEE----EeeccCCCC--CCCChhHHHhhc
Q 014936          112 AIDVAMALLS---R-P-----------GANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKG--WEVDLDDIESLA  170 (415)
Q Consensus       112 al~~~~~~l~---~-~-----------gd~vi~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~--~~~~~~~l~~~~  170 (415)
                      |++.+++...   + +           ..+|+....+|++....+........    ..+..+...  ...|++.+++.+
T Consensus        84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~  163 (382)
T PLN00144         84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI  163 (382)
T ss_pred             HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence            9999998753   1 0           24799999999987665544322110    011000000  012689999888


Q ss_pred             CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCcccc
Q 014936          171 DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRW  247 (415)
Q Consensus       171 ~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~  247 (415)
                      .....+.+++.| +||.|.. ++.+.+++|.++|++||+++|+||+|.++...+..... ...+.++     +.||||.+
T Consensus       164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l  238 (382)
T PLN00144        164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL  238 (382)
T ss_pred             CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc
Confidence            654455566666 7885543 34555999999999999999999999988776653221 3334433     55889994


Q ss_pred             CCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhc
Q 014936          248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                       .+|+|+||+++++        ++.+.+... ...++..+++.+.++.+.|+...+ +..++..+.-+..++.+.+.+.+
T Consensus       239 -~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~  309 (382)
T PLN00144        239 -AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGG  309 (382)
T ss_pred             -cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhh
Confidence             6789999999975        577666543 334567889999888855543221 22222222222223444444555


Q ss_pred             CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHH
Q 014936          326 IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKS  403 (415)
Q Consensus       326 ~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~  403 (415)
                      .|.+..  ....|+++|+.+..       ....+...+ .++||.+.|+..   .+.||++++  .+++++++++++|.+
T Consensus       310 ~~~~~~--vrg~G~~~~l~l~~-------~~~~~~~~~-~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~  376 (382)
T PLN00144        310 NPHVKE--VRGVGLLVGIQLDV-------PAGPLVDAC-RDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILAD  376 (382)
T ss_pred             CCCcee--eecCceEEEEEecC-------ccHHHHHHH-HHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHH
Confidence            544431  23479999999842       245565554 567999988732   479999994  678999999999999


Q ss_pred             HHHHH
Q 014936          404 FYQRH  408 (415)
Q Consensus       404 ~~~~~  408 (415)
                      ++.++
T Consensus       377 ~l~~~  381 (382)
T PLN00144        377 CLPAL  381 (382)
T ss_pred             HHHhc
Confidence            98753

>PLN02651 cysteine desulfurase

Probab=99.94  E-value=3.1e-24  Score=201.35  Aligned_cols=314  Identities=15%  Similarity=0.127  Sum_probs=212.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCC------CC--CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh--
Q 014936           51 FHTTHVATEAVAEALLSEKFNGY------AP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL--  120 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y------~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l--  120 (415)
                      .++++.+.+++.+.+.....+..      ..  ..-..++|+.+++++      +.++++|++++|++++++.++..+  
T Consensus         9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~t~a~~~~l~~~~~   82 (364)
T PLN02651          9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGATESNNLAIKGVMH   82 (364)
T ss_pred             CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence            35678899999887653211111      00  112456677777777      457789999999999988887664  


Q ss_pred             --cCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936          121 --SRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (415)
Q Consensus       121 --~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  195 (415)
                        .++||+|++....|+++...   +...|+++..++.+  .++.+|+++++++++++++++++++++|+||.+.|   +
T Consensus        83 ~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l  157 (364)
T PLN02651         83 FYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---V  157 (364)
T ss_pred             hccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---H
Confidence              46899999999888765443   34578898888875  34568999999999999999999999999999955   7


Q ss_pred             HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH
Q 014936          196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM  275 (415)
Q Consensus       196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~  275 (415)
                      ++|.++|+++|+++++|.+++...    .+..+..++.+   +++.|.+|+++.+|  +|+++++++....-.|.+...-
T Consensus       158 ~~I~~~~~~~g~~~~vD~a~~~g~----~~~~~~~~~~D---~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~~g~~  228 (364)
T PLN02651        158 EEIGELCREKKVLFHTDAAQAVGK----IPVDVDDLGVD---LMSISGHKIYGPKG--VGALYVRRRPRVRLEPLMSGGG  228 (364)
T ss_pred             HHHHHHHHHcCCEEEEEcchhhCC----cccCcccCCCC---EEEechhhhCCCCc--eEEEEEcCCCCCCCCccccCCC
Confidence            788888999999999999998732    22334444443   77888999744445  8998887632111111111000


Q ss_pred             HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCC---CC--ceEEEEecCccc
Q 014936          276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKP---EG--SMAVMLKLNLSL  349 (415)
Q Consensus       276 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p---~~--g~~~~~~l~~~~  349 (415)
                      .......++++.....++.++|+... +..+...++.++.++++.+.|++ +|+++++ .|   ..  ...+.+.++.  
T Consensus       229 ~~~~~~~GT~~~~~~~~l~~al~~~~-~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~-~~~~~~~~~~~i~~~~~~~--  304 (364)
T PLN02651        229 QERGRRSGTENTPLVVGLGAACELAM-KEMDYDEKHMKALRERLLNGLRAKLGGVRVN-GPRDPEKRYPGTLNLSFAY--  304 (364)
T ss_pred             ccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEE-CCCCcccCcCCEEEEEeCC--
Confidence            00111245667777777777776433 23477778889999999999985 6787744 33   11  2244444542  


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLE  395 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~  395 (415)
                          .+..++...| .+  |.++.|..|..                   .+.+|+|++  ++++|++
T Consensus       305 ----~~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        305 ----VEGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             ----CCHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence                1456666665 44  99998887632                   268999995  5777764

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.94  E-value=5.2e-24  Score=202.68  Aligned_cols=341  Identities=17%  Similarity=0.176  Sum_probs=217.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .++.++||..|.-.... --.+|.+.+++.+.+....+ ....  .....++++.++++.        ..+.++++++|+
T Consensus        29 dg~~~lD~~~~~~~~~~-Gh~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~SGs   98 (400)
T PTZ00125         29 EGKKYYDFLSAYSAVNQ-GHCHPKILAALINQAQKLTL-TSRAFYNDVLGLAEKYITDLF--------GYDKVLPMNSGA   98 (400)
T ss_pred             CCCEEEEcccCHhhccC-CcCCHHHHHHHHHHHHhccc-ccccccCHHHHHHHHHHHhCC--------CCCEEEEeCCcH
Confidence            47889999877522110 11578999999998764322 1111  112234444444432        236899999999


Q ss_pred             HHHHHHHHHhcC----------CCCEEEEcCCCCcchHHHHHhCCCeEEEe----eccCC--CCCCCChhHHHhhcC-CC
Q 014936          111 QAIDVAMALLSR----------PGANILLPRPGFPIYELSAAFRHIEVRHF----DLLPD--KGWEVDLDDIESLAD-QN  173 (415)
Q Consensus       111 ~al~~~~~~l~~----------~gd~vi~~~p~y~~~~~~~~~~g~~~~~~----~~~~~--~~~~~~~~~l~~~~~-~~  173 (415)
                      +|+..+++.+..          .+++|++.+-+|++........+......    +..+.  .-.-.|++++++.++ ++
T Consensus        99 ~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~  178 (400)
T PTZ00125         99 EAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPN  178 (400)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCC
Confidence            999999997741          24688888888887654433222111000    00000  000137999999886 56


Q ss_pred             ceEEEecCCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          174 TVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       174 ~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      +++|++..++||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.|.... ....+....++   ++||.++.+++
T Consensus       179 ~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~-~~~~~~~pd~~---~~sK~l~~g~~  254 (400)
T PTZ00125        179 VAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLA-HDHEGVKPDIV---LLGKALSGGLY  254 (400)
T ss_pred             eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhH-HHhcCCCCCEE---EEcccccCCCc
Confidence            777777777999999886 55699999999999999999999987665554211 11122122233   46899866556


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC----C
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI----P  327 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~  327 (415)
                      |+||+++++        ++.+.+.... ..+.+.+++.+.++.+.|+...++   ...++++++.+++.+.|+++    +
T Consensus       255 ~ig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~---~~~~~~~~~~~~l~~~l~~l~~~~~  323 (400)
T PTZ00125        255 PISAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEE---KLAENAQRLGEVFRDGLKELLKKSP  323 (400)
T ss_pred             CcEEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999976        6777765432 234567888888887776542111   23344445555555555543    2


Q ss_pred             CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936          328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~  405 (415)
                      .+. . ....|.++++.++...   .....++...++ ++||.+.|+.    .+++||++  ..+++++++++++|.+++
T Consensus       324 ~~~-~-~~~~g~~~~v~~~~~~---~~~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l  393 (400)
T PTZ00125        324 WVK-E-IRGKGLLNAIVFDHSD---GVNAWDLCLKLK-ENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVL  393 (400)
T ss_pred             CeE-E-EecccEEEEEEEccCc---chHHHHHHHHHH-HCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence            222 1 2335778887775311   013456666665 6799998863    47999997  478999999999999988


Q ss_pred             HHH
Q 014936          406 QRH  408 (415)
Q Consensus       406 ~~~  408 (415)
                      +++
T Consensus       394 ~~~  396 (400)
T PTZ00125        394 KSF  396 (400)
T ss_pred             HHH
Confidence            765

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.94  E-value=4.9e-24  Score=198.74  Aligned_cols=283  Identities=16%  Similarity=0.205  Sum_probs=194.0

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g  145 (415)
                      +.+|++ ....+|++++|++.        . ++.++++++++++..++.+++++||+|+++.|+|+.+...+    ...|
T Consensus        45 y~ry~~-p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G  114 (366)
T PRK07582         45 YGRASN-PTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG  114 (366)
T ss_pred             eECCCC-ccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence            456666 46799999999986        2 35666677778999999999999999999999998876654    4578


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++....      .+    .+.++++++++++|+||+|.+   .++++|+++|+++|+++|+|++|....  +.  
T Consensus       115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~~--~~--  177 (366)
T PRK07582        115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATPL--GQ--  177 (366)
T ss_pred             EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCcc--cc--
Confidence            89888875321      11    223578999999999999987   468899999999999999999986421  22  


Q ss_pred             ccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      .++. ++.+   ++++|+||.++. +|+++||+++++       +++.+.++.... ....+++.....+...|+.    
T Consensus       178 ~p~~-~g~D---ivv~S~sK~l~G~~g~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t----  242 (366)
T PRK07582        178 RPLE-LGAD---LVVASDTKALTGHSDLLLGYVAGRD-------PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT----  242 (366)
T ss_pred             Cchh-cCCc---EEEecccccccCCCCeeEEEEEcCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----
Confidence            1221 2322   788999998744 679999999754       256676665533 3345677777777666654    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE  367 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~  367 (415)
                       +..+.++.+++...+.+.|++.|.+..+.+|.                .|-.+.++++        + .+.+.+.+.+.
T Consensus       243 -l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--------~-~~~~~~~~~~l  312 (366)
T PRK07582        243 -LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--------D-AAAAERFVAAS  312 (366)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--------C-HHHHHHHHHhC
Confidence             56677888889999999999887765443332                2334455553        2 22344455666


Q ss_pred             CeEEE---cCCCCC-----------C-CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          368 SVIIL---PGTAVG-----------L-KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       368 gi~v~---~g~~~~-----------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      ++...   -|....           . ++.||+|++..  +.+..++.|.++++
T Consensus       313 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE--~~~dli~dl~~al~  364 (366)
T PRK07582        313 RLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIE--DTDDLVADLERALD  364 (366)
T ss_pred             CcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence            66543   122111           1 35799999864  34555666665554

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.94  E-value=1.9e-23  Score=195.60  Aligned_cols=224  Identities=16%  Similarity=0.130  Sum_probs=166.3

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---HhCCCeE
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRHIEV  148 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~---~~~g~~~  148 (415)
                      ++++ +...+|++.+|+++        ..+++++++|+++|+..++.+++++||+|+++.|+|.++...+   ...|+++
T Consensus        49 r~~n-p~~~~lE~~lA~l~--------g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v  119 (385)
T PRK08574         49 REEN-PTLRPLEEALAKLE--------GGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKV  119 (385)
T ss_pred             CCCC-ccHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEE
Confidence            4444 46789999999998        3467888999999999999999999999999999999877665   4457776


Q ss_pred             EEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          149 RHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       149 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      ..++        +|++++++++++ ++++|++.+|+||||.+++   +++|+++|+++|+++|+|++|+....    ..+
T Consensus       120 ~~~~--------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~~  184 (385)
T PRK08574        120 VLAY--------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YRP  184 (385)
T ss_pred             EEEC--------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CCh
Confidence            6542        368899999987 8999999999999999976   66888889999999999999965331    112


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHH
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      + ..+.   .+++.|++|.++.+|-.+ |++++.+       .++.+.++.... .+...++.....+...|+.     +
T Consensus       185 l-~~Ga---Divv~S~sK~l~g~~d~~gG~vi~~~-------~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t-----L  248 (385)
T PRK08574        185 L-RHGA---DFVVHSLTKYIAGHNDVVGGVAVAWS-------GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT-----L  248 (385)
T ss_pred             h-hhCC---cEEEeeCceeecCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-----H
Confidence            2 1222   388999999987777654 6566643       246666655433 3445566655555555554     6


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ..+.++..+++..+.+.|+..|.+..+.+|
T Consensus       249 ~~R~~~~~~na~~la~~L~~~p~v~~V~yP  278 (385)
T PRK08574        249 EVRFERQCRNAMAIAEFLSEHPKVAEVYYP  278 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCcCEEECC
Confidence            677778888889999999887765534343

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.94  E-value=1.1e-23  Score=197.88  Aligned_cols=294  Identities=16%  Similarity=0.113  Sum_probs=203.7

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g  145 (415)
                      +.+|+++ ...+|++.++++.        ..+++++++|+++|+.+++.+++++||+|+++.|+|..+..    .+...|
T Consensus        59 Y~r~~~p-t~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~G  129 (394)
T PRK07050         59 YGLHATP-TSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFG  129 (394)
T ss_pred             cCCCCCH-HHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcC
Confidence            4566553 5688999999887        35789999999999999999999999999999999998664    456789


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++..       +.+.+++++++++++|++++|+||+|..   .++++|+++|+++|+++|+|++|+...+    .
T Consensus       130 i~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~----~  195 (394)
T PRK07050        130 ITVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLA----F  195 (394)
T ss_pred             eEEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccccc----c
Confidence            988877531       4577888898999999999999999765   8999999999999999999999976432    1


Q ss_pred             ccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      .++ .++.   .+++.|++|.++. .+.+.|++++.+       +++.++++.... ...+.++.....+...|+.    
T Consensus       196 ~~l-~~Ga---Di~v~S~tK~~~g~~~~~gG~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t----  260 (394)
T PRK07050        196 KPF-EHGV---DISVQALTKYQSGGSDVLMGATITAD-------AELHAKLKLARMRLGIGVSADDCSLVLRGLPS----  260 (394)
T ss_pred             CHH-HcCC---eEEEEECCceecCCCCeeEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc----
Confidence            111 1222   3889999999753 456789888754       257777765543 3456666666655555554    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE  367 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~  367 (415)
                       +..+.++..++...+.+.|++.|.+..+.+|.                .|..+.+.+....  +..+..+++.. ++..
T Consensus       261 -l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~--~~~~~~~~~~~-l~~~  336 (394)
T PRK07050        261 -LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--SPAQVDAFVEA-LELF  336 (394)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC--CHHHHHHHHHc-CCCC
Confidence             45577777777788888888776655343332                1223344443210  00123344443 3555


Q ss_pred             CeEEEcCCCCCC-----------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          368 SVIILPGTAVGL-----------------KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       368 gi~v~~g~~~~~-----------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++.++-|.....                 .+.||+|++..  +.+.+++.|.+++.+
T Consensus       337 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE--~~~dl~~dl~~al~~  391 (394)
T PRK07050        337 AIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLE--DEADLIADLEQALEA  391 (394)
T ss_pred             eeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCcC--CHHHHHHHHHHHHHH
Confidence            655554443210                 25799999874  566666777766654

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.93  E-value=1.1e-24  Score=203.70  Aligned_cols=317  Identities=14%  Similarity=0.117  Sum_probs=211.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCC--CCCCCC------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-
Q 014936           51 FHTTHVATEAVAEALLSEKF--NGYAPT------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-  121 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~--~~y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-  121 (415)
                      .++++.+++++.+.+.....  ......      .-..++|+.+++++      ++++++|++++|++++++.++.++. 
T Consensus         8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~   81 (353)
T TIGR03235         8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLAR   81 (353)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence            35678999999888753111  110000      11457888888887      4678899999999999999998875 


Q ss_pred             ---CCC-CEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          122 ---RPG-ANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       122 ---~~g-d~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                         ++| +.|++....|+++..   .++..|++++.++.+.  ++.+|++++++.++++++++++++|+||||.++|   
T Consensus        82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---  156 (353)
T TIGR03235        82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---  156 (353)
T ss_pred             hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---
Confidence               356 788888877776544   3455799999988753  4568999999999888999999999999999976   


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC--ChHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF--RKPKVV  272 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~--~~~~~~  272 (415)
                      +++|+++|+++|+++++|++++....    ...+...+.+   +++.|.+|+++.+|  +|+++++++....  ..|.+.
T Consensus       157 ~~~I~~l~~~~~~~~ivD~a~~~g~~----~~~~~~~~~D---~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~  227 (353)
T TIGR03235       157 IREIAEVLEAHEAFFHVDAAQVVGKI----TVDLSADRID---LISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMF  227 (353)
T ss_pred             HHHHHHHHHHcCCEEEEEchhhcCCc----cccccccCCC---EEEeehhhcCCCCc--eEEEEEccCcccccccCceee
Confidence            68888889999999999999986432    2223222222   77778899876666  8999887632100  000000


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC--ceEEEEecCcccc
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG--SMAVMLKLNLSLL  350 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~l~~~~~  350 (415)
                      ..-.......++++.....++.++++.. ....++..++++++++++.+.|++ ++++++..+..  ..++.+.++.   
T Consensus       228 ~~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~---  302 (353)
T TIGR03235       228 GGGQERGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDG---  302 (353)
T ss_pred             CCCCcCccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCC---
Confidence            0000001113455666666666666542 245678889999999999999988 48774322322  1233333331   


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCCC----CeEEEEeeCChhhHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGLK----NWLRVTFAVDPYSLEEC  397 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~----~~iRi~~~~~~~~l~~~  397 (415)
                        . +..++...| ++ +|.+.+|..|...    .++|.+++.+++++..+
T Consensus       303 --~-~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~  348 (353)
T TIGR03235       303 --V-NSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA  348 (353)
T ss_pred             --c-CHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence              1 445555554 55 9999999998653    36888887776655443

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.93  E-value=2.3e-23  Score=196.17  Aligned_cols=312  Identities=21%  Similarity=0.246  Sum_probs=223.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCC----CCC----CCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHh-
Q 014936           51 FHTTHVATEAVAEALLSEKFNG----YAP----TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALL-  120 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~----y~~----~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l-  120 (415)
                      .+.++.+.+++.+.+.....+.    +..    .....++|+.+++++      ++++ ++|++++|++++++.++.++ 
T Consensus         9 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~~t~a~~~~~~~l~   82 (371)
T PF00266_consen    9 GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSNGTEALNAVASSLL   82 (371)
T ss_dssp             -B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESSHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccccchhhhhhhhccc
Confidence            3567889999998876422111    111    122457888888888      4567 89999999999999999999 


Q ss_pred             --cCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          121 --SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       121 --~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                        .++|++|++.+-.|++..    ...+..|+++..++.+..  ..+|++++++.++++++++++++.+|.||...|   
T Consensus        83 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---  157 (371)
T PF00266_consen   83 NPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISHVENSTGVRNP---  157 (371)
T ss_dssp             HHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---
T ss_pred             cccccccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeecccccccEEee---
Confidence              789999999999998765    344578999999987543  358999999999999999999999999999965   


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +++|.++|+++|+++++|.+++...    .+..+..++.+   ++++|.+|.++.+|  +|+++.++        +..+.
T Consensus       158 i~~I~~~~~~~~~~~~vD~~~~~g~----~~id~~~~~~D---~~~~s~~Kl~gp~G--~g~l~v~~--------~~~~~  220 (371)
T PF00266_consen  158 IEEIAKLAHEYGALLVVDAAQSAGC----VPIDLDELGAD---FLVFSSHKLGGPPG--LGFLYVRP--------EAIER  220 (371)
T ss_dssp             HHHHHHHHHHTTSEEEEE-TTTTTT----SS--TTTTTES---EEEEESTSTTSSST--EEEEEEEH--------HHHHH
T ss_pred             eceehhhhhccCCceeEechhcccc----ccccccccccc---eeeecccccCCCCc--hhhheehh--------hhhhc
Confidence            7788888889999999999999733    33444444443   78889999656667  79998876        44444


Q ss_pred             HHhhc----------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          275 MKKYF----------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       275 ~~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      ++...                      ...++++.....++..+++...+..+++..++..++.+++.+.|++++++..+
T Consensus       221 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~  300 (371)
T PF00266_consen  221 LRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVL  300 (371)
T ss_dssp             HHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEES
T ss_pred             cccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEe
Confidence            42210                      01235666666777777765445667888899999999999999998877733


Q ss_pred             C---CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEEEEee--CChhhHHHH
Q 014936          333 H---KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLRVTFA--VDPYSLEEC  397 (415)
Q Consensus       333 ~---~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iRi~~~--~~~~~l~~~  397 (415)
                      .   .+..+..+.+.++.      .+..++...| ++.||.+..|..+.        ..+.||+|+.  .+++|++++
T Consensus       301 ~~~~~~~~~~i~~~~~~~------~~~~~~~~~L-~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l  371 (371)
T PF00266_consen  301 GPDDEPRRPSIVSFNLPG------SDADDVVKYL-EERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL  371 (371)
T ss_dssp             SSSCGGBGTTEEEEEETT------SSHHHHHHHH-HHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred             eecccccccceEEEeecC------CCHHHHHHHH-hhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence            2   12223445555543      2455555555 55699999988776        3589999995  688998864

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK05968 hypothetical protein; Provisional

Probab=99.93  E-value=3.7e-23  Score=194.29  Aligned_cols=288  Identities=16%  Similarity=0.103  Sum_probs=202.1

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCC
Q 014936           71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHI  146 (415)
Q Consensus        71 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~  146 (415)
                      .+|+.+ ...+|++.+|++.+        .+..+++++|++|+..++.+++++||+|+++.+.|.+..    ..+...|+
T Consensus        58 ~r~~~p-~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~  128 (389)
T PRK05968         58 SRGDNP-TVRAFEEMLAKLEG--------AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGV  128 (389)
T ss_pred             cCCCCh-hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCc
Confidence            344443 46899999999983        234556677788999999999999999999999998643    45566799


Q ss_pred             eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936          147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV  226 (415)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  226 (415)
                      ++..++.       .|++++++++ +++++|++.+|+||++.+   .++++|+++|+++|+++|+|++|+...+..    
T Consensus       129 ~v~~vd~-------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~----  193 (389)
T PRK05968        129 EVDYVDG-------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR----  193 (389)
T ss_pred             eEEEeCC-------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----
Confidence            9888753       2789999888 578899998877766555   999999999999999999999997654321    


Q ss_pred             cccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHH
Q 014936          227 PMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       227 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      ++ ..+.   .+++.|++|.++.+| ++.|+++.++        +++++++...  ......++.....+...|+.    
T Consensus       194 p~-~~g~---Divv~S~tK~l~g~~~~~gG~i~~~~--------~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t----  257 (389)
T PRK05968        194 PI-TLGV---DLVIHSASKYLGGHSDTVAGVVAGSK--------EHIARINAEAYPYLGAKLSPFEAWLLLRGLRT----  257 (389)
T ss_pred             ch-hcCC---cEEEeeccccccCCCCeEEEEEEECH--------HHHHHHHHHHHHhCCCCCChHHHHHHHcccCc----
Confidence            12 1222   277889999988755 5788887654        5666666432  22345666666666666654    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-----------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-----------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL  372 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-----------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~  372 (415)
                       +..+.++..++...+.+.|+.+|++..+.+|.           .|..+.++++.    + .+..+++..| +..++.++
T Consensus       258 -l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~----~-~~~~~f~~~L-~~~~~~~s  330 (389)
T PRK05968        258 -LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE----G-IDVRAFADAL-KLFRLGVS  330 (389)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC----H-HHHHHHHHhC-CccEEecC
Confidence             57777777888889999999988886555552           23355555642    1 1345555554 55676666


Q ss_pred             cCCCCC----------------------C-CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          373 PGTAVG----------------------L-KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       373 ~g~~~~----------------------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      -|..+.                      . ++.||+|++..  +.+.+++.|++++++
T Consensus       331 ~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE--~~~dl~~dl~~al~~  386 (389)
T PRK05968        331 WGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE--GTEALWADLEQALAA  386 (389)
T ss_pred             CCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHH
Confidence            665544                      1 46899999863  455666666666654

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.93  E-value=1e-22  Score=192.75  Aligned_cols=232  Identities=15%  Similarity=0.122  Sum_probs=170.3

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~~  147 (415)
                      +++. +....|++.+|++.        ..+..++++||++|+..++..++++||+|+++.+.|++..    ..++..|++
T Consensus        60 r~~~-p~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~  130 (431)
T PRK08248         60 RIMN-PTTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGIT  130 (431)
T ss_pred             CCCC-chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEE
Confidence            3344 35678999999987        3568889999999999999999999999999999997643    345678999


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      ++.++.       .|++++++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++++.    +....+
T Consensus       131 v~~vd~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~p  196 (431)
T PRK08248        131 VKFVDP-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRP  196 (431)
T ss_pred             EEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCCh
Confidence            988864       3789999999889999999999999999976   56888889999999999999863    112222


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC-----------Ch--------------HHH-HHHHHhh-cc
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF-----------RK--------------PKV-VERMKKY-FD  280 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-----------~~--------------~~~-~~~~~~~-~~  280 (415)
                      + .++.   .+++.|++|.++.+|.++|++++.+....+           .+              +.+ .+..... ..
T Consensus       197 l-~~ga---Divv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (431)
T PRK08248        197 I-EHGA---DIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRD  272 (431)
T ss_pred             h-HcCC---CEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHh
Confidence            2 2333   388899999999999999998875432110           00              000 1111111 22


Q ss_pred             ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          281 ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       281 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      .....++.....+..-|+.     +..+.++..++...+.+.|++.|.+..+.+|
T Consensus       273 ~G~~l~p~~a~l~~rgl~t-----l~~R~~~~~~nA~~la~~L~~~p~v~~V~yP  322 (431)
T PRK08248        273 LGAALSPFNSFLLLQGLET-----LHLRMERHSENALAVAKFLEEHEAVEWVSYP  322 (431)
T ss_pred             cCCCCCHHHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence            3345566666666666655     6778888899999999999988876644444

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.93  E-value=4.4e-23  Score=196.25  Aligned_cols=352  Identities=16%  Similarity=0.099  Sum_probs=212.9

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +|+.++|+..|.-....+ -.+|.+.+++++++.......+..  ...+.+..+|+.+.+..+ +...+.++++++|++|
T Consensus        31 dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA  106 (420)
T TIGR00700        31 DGNRLIDFASGIAVLNIG-HSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAEA  106 (420)
T ss_pred             CCCEEEECccCHHhccCC-CCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHHH
Confidence            488999998885322111 247899999999987643322221  112233344444433221 1123689999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccCC-C------C--CCCChhHHH
Q 014936          113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPD-K------G--WEVDLDDIE  167 (415)
Q Consensus       113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~-~------~--~~~~~~~l~  167 (415)
                      ++.+++...  ....+|+....+|++....+.....              .+..++.... .      .  +.-+++.++
T Consensus       107 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (420)
T TIGR00700       107 VENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAAR  186 (420)
T ss_pred             HHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHH
Confidence            999998754  1225788899999987655443211              1111221100 0      0  000245566


Q ss_pred             hhcC----CCceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936          168 SLAD----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (415)
Q Consensus       168 ~~~~----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (415)
                      +.+.    ....+.+|..| +..+|..+ +.+.+++|.++|++||+++|+||+|.++.+.+. ...+..++..   ..+.
T Consensus       187 ~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~~~~~~~---pDi~  262 (420)
T TIGR00700       187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFACEHEGPE---PDLI  262 (420)
T ss_pred             HHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHHhhcCCC---CCEE
Confidence            5542    23455667777 55678765 555599999999999999999999999877664 2222223222   2234


Q ss_pred             cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHH
Q 014936          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l  319 (415)
                      ++||.++ +|+|+||+++++        ++++.+... ...+.+.+++++.++.+.|+...+ ...++..+.-+..++.+
T Consensus       263 ~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L  333 (420)
T TIGR00700       263 TTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRL  333 (420)
T ss_pred             Eeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence            6899976 899999999975        677766533 234567889999999777754222 22233323333333334


Q ss_pred             HHHhhcCCCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHH
Q 014936          320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLE  395 (415)
Q Consensus       320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~  395 (415)
                      .+..+++|.+..+ .+. |.++|+.+.....  +.......+... +.++||.+.|+..|+  +++||+++  .++++++
T Consensus       334 ~~l~~~~~~~~~v-rg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~p~~~f~--~~lRl~p~l~~~~~~l~  408 (420)
T TIGR00700       334 TTLKAVDPRIGDV-RGL-GAMIAVELVDPGTTEPDAGLAERIATA-AHAAGLLLLTCGMFG--NIIRFLPPLTIGDELLS  408 (420)
T ss_pred             HHHHhhCCCEEEe-ecc-ceEEEEEEecCCCCCccHHHHHHHHHH-HHHCCeEEeccCCCC--CEEEEECCCCcCHHHHH
Confidence            3333445544422 333 7888887732100  000012233333 357899999987664  79999984  5899999


Q ss_pred             HHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQ  406 (415)
Q Consensus       396 ~~l~~l~~~~~  406 (415)
                      +++++|.+++.
T Consensus       409 ~~~~~l~~~l~  419 (420)
T TIGR00700       409 EGLDILCAILA  419 (420)
T ss_pred             HHHHHHHHHhh
Confidence            99999998874

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.93  E-value=5.8e-23  Score=192.75  Aligned_cols=229  Identities=16%  Similarity=0.129  Sum_probs=166.8

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~  152 (415)
                      +....|++.+|++.        ..+..+++++|++|+.+++.+++++||+|+++.++|.+....    +...|+++..++
T Consensus        61 Ptv~~lE~~la~le--------g~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd  132 (432)
T PRK06702         61 PTLAAFEQKLAELE--------GGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN  132 (432)
T ss_pred             cHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC
Confidence            35688999999987        345688999999999999999999999999999999876665    677899988875


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      .      .+|++.++++++++|++|++.+|+||++.+.+   +.+|+++|+++|+++|+|++++...    ...+ ..++
T Consensus       133 ~------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~----~~~p-l~~G  198 (432)
T PRK06702        133 P------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPY----LCQA-FEHG  198 (432)
T ss_pred             C------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchh----hCCh-hhcC
Confidence            3      36889999999999999999999999999955   8888999999999999999985211    1111 1233


Q ss_pred             CCCCeEEEccCcc-----ccCCCCceE-----EEEEeeCCCCCCCh--------------HHHHHHH--HhhccccCCch
Q 014936          233 STVPILTLGSLSK-----RWIVPGWRL-----GWFVTTDPCGMFRK--------------PKVVERM--KKYFDILGDPA  286 (415)
Q Consensus       233 ~~~~~i~~~s~sK-----~~~~~G~r~-----G~~~~~~~~~~~~~--------------~~~~~~~--~~~~~~~~~~~  286 (415)
                      .+   |++.|+||     ..+++|.++     +|...++......+              +.+..+.  ..........+
T Consensus       199 AD---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s  275 (432)
T PRK06702        199 AN---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMS  275 (432)
T ss_pred             CC---EEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCC
Confidence            33   89999999     444455444     34333221111000              0111111  12233456778


Q ss_pred             hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          287 TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       287 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +.....+...|+.     ++.+.++..++...+.+.|++.|.+..+.+|
T Consensus       276 p~~a~l~~rgL~T-----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yP  319 (432)
T PRK06702        276 PFNAYISNIGLET-----LHLRMERHSENALAVAKWLADHERIEWVNYP  319 (432)
T ss_pred             HHHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence            8888888888876     6777778889999999999988776644444

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.93  E-value=4.7e-23  Score=191.28  Aligned_cols=291  Identities=15%  Similarity=0.144  Sum_probs=197.7

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEE
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR  149 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~  149 (415)
                      +.+|+. +...+|++++|++.        ..+++++++|+++|+.+++. ++++||+|+++.+.|......+...-... 
T Consensus        48 Y~R~~~-p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-  116 (364)
T PRK07269         48 YTRTKN-PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG-  116 (364)
T ss_pred             eeCCCC-ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-
Confidence            455666 46789999999998        57799999999999999985 56899999999999987665443221110 


Q ss_pred             EeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc
Q 014936          150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG  229 (415)
Q Consensus       150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  229 (415)
                      .+..    .+..|++++++++++++++|++++|+||+|.+.   ++++|+++|+++|+++|+|++|....+    ..++ 
T Consensus       117 ~~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~----~~pl-  184 (364)
T PRK07269        117 RFHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIY----QRPI-  184 (364)
T ss_pred             cEEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCccccc----CCch-
Confidence            0110    123588999999999999999999999999884   788888899999999999999754321    1222 


Q ss_pred             ccCCCCCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936          230 VFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKK  307 (415)
Q Consensus       230 ~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~  307 (415)
                      ....+   +++.|++|.++.+|- =.|++++++       +++.++++... ......++.....+...|+.     +..
T Consensus       185 ~~gaD---ivv~S~tK~l~g~~d~~gG~v~~~~-------~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-----L~~  249 (364)
T PRK07269        185 ELGAD---IVLHSATKYLSGHNDVLAGVVVTND-------LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-----LSL  249 (364)
T ss_pred             hhCCc---EEEecCceeccCCCcccceEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-----HHH
Confidence            22333   889999999765442 357777654       24666665443 22345677777777777765     788


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHH---------HhhcCeEEEcCCCCC
Q 014936          308 TLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL---------AKEESVIILPGTAVG  378 (415)
Q Consensus       308 ~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l---------l~~~gi~v~~g~~~~  378 (415)
                      +.++.++++..+.+.|+..|.+..+.+|..|-.+.+.+...     .....++..+         .....+.+.|+..+.
T Consensus       250 r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~-----~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~  324 (364)
T PRK07269        250 RMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADE-----TRIPHILNSLKVFTFAESLGGVESLITYPTTQTH  324 (364)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCH-----HHHHHHHHhCCcceEccCCCCcCeEeeCCccccc
Confidence            88888999999999999988766565565554444445310     0122222222         111234444543221


Q ss_pred             C-------------CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          379 L-------------KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       379 ~-------------~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                      .             ++-||+|++..  +.+.+++.|.+++
T Consensus       325 ~~~~~~~r~~~Gi~~~liRlsvGlE--~~~dli~dl~~al  362 (364)
T PRK07269        325 ADIPAEVRHSYGLTDDLLRLSIGIE--DARDLIADLKQAL  362 (364)
T ss_pred             ccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHh
Confidence            1             46799999874  5666666666665

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.93  E-value=4.5e-23  Score=184.72  Aligned_cols=340  Identities=18%  Similarity=0.207  Sum_probs=229.0

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .+++.++||..|.....  ++ .+|.+.++++++++.-.  .+.|.++ ...+|-+.+++..      + ..+.++++||
T Consensus        39 ~~G~~YlDf~~Giav~~--lGH~hP~iv~al~~Q~~kl~h~sn~~~~~-~~~~la~~L~~~s------~-~~d~vff~NS  108 (404)
T COG4992          39 QQGREYLDFAAGIAVNN--LGHCHPALVEALKEQAEKLWHVSNLFYNE-PQAELAEKLVELS------P-FADRVFFCNS  108 (404)
T ss_pred             CCCCEeeeeccceeeec--cCCCCHHHHHHHHHHHHHhhhcccccCCh-HHHHHHHHHHhhC------c-cccEEEEcCC
Confidence            45889999988874322  33 58999999999877522  2334332 2234444444443      2 3789999999


Q ss_pred             hHHHHHHHHHHhcCC-----CCEEEEcCCCCcchHHHHHhCCCeEEEe----eccCCC---CCCCChhHHHhhcCCCceE
Q 014936          109 CTQAIDVAMALLSRP-----GANILLPRPGFPIYELSAAFRHIEVRHF----DLLPDK---GWEVDLDDIESLADQNTVA  176 (415)
Q Consensus       109 ~~~al~~~~~~l~~~-----gd~vi~~~p~y~~~~~~~~~~g~~~~~~----~~~~~~---~~~~~~~~l~~~~~~~~~~  176 (415)
                      |+||++.+++...+-     ..+|+....+|++-.-.+...+.+..+-    |..+.-   .| -|+++++++++++|.+
T Consensus       109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-nDi~al~~ai~~~taA  187 (404)
T COG4992         109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-NDIEALEAAIDEDTAA  187 (404)
T ss_pred             cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-CCHHHHHHHhccCeEE
Confidence            999999999986522     1378888888887544443333333111    111110   11 2899999999998887


Q ss_pred             EEecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936          177 LVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (415)
Q Consensus       177 v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  255 (415)
                      |++---+...|++ .+.+.++++.++|++||+++|.||++.++..+|+-... ..++-.++   |.++.|. ...|+++|
T Consensus       188 vivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~-e~~gV~PD---I~tlaK~-LgGG~Pig  262 (404)
T COG4992         188 VIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAY-EHYGVEPD---ILTLAKA-LGGGFPIG  262 (404)
T ss_pred             EEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHH-HHhCCCCC---EEEeecc-ccCCccce
Confidence            7666558888887 56777999999999999999999999998877763321 22222222   3367899 46679999


Q ss_pred             EEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----CCCCc
Q 014936          256 WFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----IPCIS  330 (415)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~  330 (415)
                      .+++..        .+.+.+.... ..+++.||++.+++.+.|+...+   ++..++.++.-++|.+.|++    .|-+.
T Consensus       263 A~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~L~~l~~~~~~v~  331 (404)
T COG4992         263 AMLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQRLRELKRRYPLVK  331 (404)
T ss_pred             eeEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHHHHHHhhcCCcee
Confidence            999864        3444444442 24578899999999888876332   23334444555555555554    43232


Q ss_pred             CCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       331 ~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                        ....-|+++-+.+....     ...+++..+ .++|+.+.+..    ++.+|+...  .+++++++++++|+++++..
T Consensus       332 --~vRG~GLmiGiel~~~~-----~a~~~~~~~-~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~  399 (404)
T COG4992         332 --EVRGRGLMIGIELKEPY-----RARDIVRAL-REEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAA  399 (404)
T ss_pred             --eeecceeEEEEEecCcc-----cHHHHHHHH-HHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence              24556778777776421     246666665 67799998765    479999994  69999999999999999876


Q ss_pred             HH
Q 014936          409 AK  410 (415)
Q Consensus       409 ~~  410 (415)
                      ..
T Consensus       400 ~~  401 (404)
T COG4992         400 SA  401 (404)
T ss_pred             hh
Confidence            54

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.93  E-value=2.5e-22  Score=193.57  Aligned_cols=341  Identities=13%  Similarity=0.086  Sum_probs=223.9

Q ss_pred             ecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC---CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHH
Q 014936           40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY---APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA  116 (415)
Q Consensus        40 l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y---~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~  116 (415)
                      .+.|.+.    +..++.+.+++.+...-...+.|   +...|..++++.+.+++.+..|.  +...+..++|+++.+..+
T Consensus        73 ~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~~~~l~~~~GA~a~~~~l  146 (481)
T PRK04366         73 YPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--DAVTLQPAAGAHGELTGL  146 (481)
T ss_pred             ecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--CceEEEeCcHHHHHHHHH
Confidence            4555543    55678888888775221244567   34568889999999999987774  333444455555444422


Q ss_pred             --HH-HhcCCCC----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccC
Q 014936          117 --MA-LLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV  189 (415)
Q Consensus       117 --~~-~l~~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~  189 (415)
                        ++ .+.++||    +|+++.|+|+.+...++..|++++.++.+  .++.+|+++|++++++++++|++++|+ |||.+
T Consensus       147 ~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~  223 (481)
T PRK04366        147 LMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGLF  223 (481)
T ss_pred             HHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc
Confidence              22 3456676    99999999999999999999999999874  346789999999998899999999998 99965


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC----CceEEEEEeeCCCCC
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWFVTTDPCGM  265 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~  265 (415)
                        ..++++|+++|+++|+++++|.++.....+ .  .....++.+   +++++.+|+|+.|    |..+|++.+++    
T Consensus       224 --~~dl~eI~~~a~~~gal~iVD~a~~~~~~g-~--~~~~~~GaD---~~~~~~hK~l~~P~g~Ggp~~G~l~~~~----  291 (481)
T PRK04366        224 --ERNILEIAEIVHEAGGLLYYDGANLNAILG-K--ARPGDMGFD---VVHLNLHKTFSTPHGGGGPGSGPVGVKE----  291 (481)
T ss_pred             --chHHHHHHHHHHHcCCEEEEEecChhhhcc-c--CCccccCCC---EEEEechhhcCCCCCCCCCCeeeeeehh----
Confidence              357999999999999999999998643221 1  122334443   8888999997644    45578887754    


Q ss_pred             CChHHHHHHHHhh--------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936          266 FRKPKVVERMKKY--------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       266 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                          ++.+.+...                    .....+.+.....++..++.....+.+++..++..++.+++.+.|++
T Consensus       292 ----~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~  367 (481)
T PRK04366        292 ----ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD  367 (481)
T ss_pred             ----hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence                222222100                    00011223344455555555555567778888888889999999988


Q ss_pred             CCCCcCCCCCCCc-eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-CCCeEEEEe--eCChhhHHHHHHHH
Q 014936          326 IPCISCPHKPEGS-MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-LKNWLRVTF--AVDPYSLEECLDRI  401 (415)
Q Consensus       326 ~~~~~~~~~p~~g-~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~--~~~~~~l~~~l~~l  401 (415)
                      +..+.   .+... .-+.+..+.....+. +..++.+.| .++||.+....... ..+.+|+++  .+++++|+.+++.|
T Consensus       368 ~~~~~---~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~L-~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l  442 (481)
T PRK04366        368 IYDLP---YDRPCMHEFVLSGKKLKETGV-RTLDIAKRL-LDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAM  442 (481)
T ss_pred             hCccc---CCCCeeEEEEEECccccccCC-CHHHHHHHH-HHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHH
Confidence            62332   22111 112222221011111 456666666 56798864211111 257899999  46899999999999


Q ss_pred             HHHHHHHHH
Q 014936          402 KSFYQRHAK  410 (415)
Q Consensus       402 ~~~~~~~~~  410 (415)
                      +++.++...
T Consensus       443 ~~i~~~~~~  451 (481)
T PRK04366        443 KQIAEEAKE  451 (481)
T ss_pred             HHHHHHHHh
Confidence            999876543

>PLN02624 ornithine-delta-aminotransferase

Probab=99.93  E-value=6.8e-23  Score=196.92  Aligned_cols=347  Identities=17%  Similarity=0.159  Sum_probs=217.9

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC--CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG--YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+++.++||..|.-.... --.+|.+.+++++++....+..  +. .....+|.+.+++++        ..+.++++++|
T Consensus        72 ~dG~~ylD~~sg~~~~~~-Gh~~p~v~~ai~~ql~~~~~~~~~~~-~~~~~~la~~L~~~~--------~~~~~~f~~SG  141 (474)
T PLN02624         72 PEGKKYLDFLSAYSAVNQ-GHCHPKIIKALTEQAEKLTLSSRAFY-NDKFPEFAEYLTSMF--------GYDMVLPMNTG  141 (474)
T ss_pred             CCCCEEEEcccchhcccC-CCCCHHHHHHHHHHHHhcCCcccccC-CHHHHHHHHHHHhhc--------CCCeEEEeCCh
Confidence            347788899777532211 1247999999999988533211  22 233456666666654        24689999999


Q ss_pred             HHHHHHHHHHhcC-----C----CC-EEEEcCCCCcchHHHHHhCCCeEEE----eeccCC---CCCCCChhHHHhhcC-
Q 014936          110 TQAIDVAMALLSR-----P----GA-NILLPRPGFPIYELSAAFRHIEVRH----FDLLPD---KGWEVDLDDIESLAD-  171 (415)
Q Consensus       110 ~~al~~~~~~l~~-----~----gd-~vi~~~p~y~~~~~~~~~~g~~~~~----~~~~~~---~~~~~~~~~l~~~~~-  171 (415)
                      ++|++.+++....     +    +. .|+....+|++....+.....+...    .|..+.   -.+ .|++.+++.++ 
T Consensus       142 seA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~  220 (474)
T PLN02624        142 AEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEE  220 (474)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHh
Confidence            9999999986542     1    22 5788888888765544332211100    000000   001 26788888775 


Q ss_pred             --CCceEEEecCCCCccccCCCHH-HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936          172 --QNTVALVIINPGNPCGNVYSYQ-HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI  248 (415)
Q Consensus       172 --~~~~~v~i~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  248 (415)
                        ++..++++..++|++|.+++.+ .+++|.++|++||+++|+||+|.++...|.... ....+....++   ++||.++
T Consensus       221 ~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a-~~~~~i~pDiv---~lsK~lg  296 (474)
T PLN02624        221 DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLA-CDWEEVRPDVV---ILGKALG  296 (474)
T ss_pred             CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhh-HHhcCCCCCEE---Eeccccc
Confidence              3456667777799999987766 599999999999999999999997665554221 11122222233   4689998


Q ss_pred             CCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc--
Q 014936          249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE--  325 (415)
Q Consensus       249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~--  325 (415)
                      .+++++|+++.++        ++.+.+.... ..+.+.+++.+.++.+.|+...+.   +..++..++.+.+.+.|++  
T Consensus       297 gG~~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~  365 (474)
T PLN02624        297 GGVIPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQ  365 (474)
T ss_pred             CCCCcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHH
Confidence            8889999999865        5666554332 234467888898888888643221   2333444444444444443  


Q ss_pred             --CCC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHH
Q 014936          326 --IPC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDR  400 (415)
Q Consensus       326 --~~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~  400 (415)
                        ++. +. . ....|.++.+.++.... +.....++...+ .++||.+.|+.    .+++||++  .++++++++++++
T Consensus       366 ~~~~~~i~-~-vrg~G~~~~i~l~~~~~-~~~~a~~~~~~L-~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~  437 (474)
T PLN02624        366 KQFPKLIK-E-VRGRGLLNAVVLNSPKL-GPVSAYDVCLKL-KERGLLAKPTH----DTIIRLAPPLSISEDELQECSKA  437 (474)
T ss_pred             HhCCCceE-E-EEeeEEEEEEEecCCCc-ChHHHHHHHHHH-HhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHH
Confidence              332 22 1 12335555555543210 001244566664 67899998863    47899997  5789999999999


Q ss_pred             HHHHHHHHHHHh
Q 014936          401 IKSFYQRHAKQL  412 (415)
Q Consensus       401 l~~~~~~~~~~~  412 (415)
                      |.+++++...++
T Consensus       438 L~~~l~~~~~~~  449 (474)
T PLN02624        438 LSDVLEHDLPKL  449 (474)
T ss_pred             HHHHHHHHHHHh
Confidence            999998866554

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.92  E-value=8.9e-23  Score=193.54  Aligned_cols=234  Identities=18%  Similarity=0.142  Sum_probs=163.2

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g  145 (415)
                      +.+|+++ ...+|++.+|++.+        .+..+++++|++++..++.+++++||+|+++.+.|++..    ..+...|
T Consensus        51 ysr~~~p-~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G  121 (418)
T TIGR01326        51 YSRLMNP-TTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG  121 (418)
T ss_pred             eECCCCh-hHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence            3455553 46899999999972        357899999999999999999999999999999997543    3456789


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.       .|++++++++++++++|++.+|+||+|.+.+   +++|+++|+++|+++|+|++|+....    .
T Consensus       122 ~~v~~v~~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~----~  187 (418)
T TIGR01326       122 IEVRFVDP-------DDPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL----C  187 (418)
T ss_pred             cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc----C
Confidence            99888864       2789999999889999999999999999964   77888889999999999999975321    1


Q ss_pred             ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC------------------------hHHHH-HHH-Hhhc
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR------------------------KPKVV-ERM-KKYF  279 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~------------------------~~~~~-~~~-~~~~  279 (415)
                      .++ ..   ...+++.|+||.++++|+|+||++++.......                        +.... +.. ....
T Consensus       188 ~~l-~~---g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~  263 (418)
T TIGR01326       188 RPI-DH---GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLR  263 (418)
T ss_pred             Cch-hc---CCeEEEECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHH
Confidence            111 11   235899999999999999999999864221100                        00000 000 1111


Q ss_pred             cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          280 DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       280 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ......++.....+..-++.     +..+.++..++...+.+.|...|++..+.+|
T Consensus       264 ~~G~~~~p~~a~~~~~~l~t-----l~~R~~~~~~~a~~la~~L~~~~~V~~V~yP  314 (418)
T TIGR01326       264 DLGAALSPFNAFLLLQGLET-----LSLRMERHVENALKVAEFLEAHPKVAWVNYP  314 (418)
T ss_pred             hcCCCCCHHHHHHHHCCccc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            22333444444444333332     4445566666778888888877665544333

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.92  E-value=2.1e-22  Score=191.25  Aligned_cols=351  Identities=15%  Similarity=0.152  Sum_probs=215.6

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-....+ -.+|.+.+++++++.......+..  ...+.+..+|+.+.+..+ ....+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse  112 (421)
T PRK09792         37 VEGNEYIDFAAGIAVLNTG-HRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAE  112 (421)
T ss_pred             CCCCEEEEccCchhhhcCC-CCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHH
Confidence            3588899997775322211 247899999999988643222211  112344455555543222 012258999999999


Q ss_pred             HHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCCCC----ChhHHHhhcC
Q 014936          112 AIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEV----DLDDIESLAD  171 (415)
Q Consensus       112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----~~~~l~~~~~  171 (415)
                      |++.+++.... .| .+|+....+|++....+... +.             .+..++... +...+    +++.+++.++
T Consensus       113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~-~~~~~~~~~~~~~l~~~~~  191 (421)
T PRK09792        113 AVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPS-DLHGISTQDSLDAIERLFK  191 (421)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCc-ccccccHHHHHHHHHHHHH
Confidence            99999988641 22 57899999998865544322 11             112222211 11111    2467777765


Q ss_pred             ----CCceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          172 ----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       172 ----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                          ....+.++..| ++++|..+ |.+.+++|.++|++||+++|+||++.++.+.|.. ..+..++....   +.+++|
T Consensus       192 ~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK  267 (421)
T PRK09792        192 SDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAK  267 (421)
T ss_pred             hccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeeh
Confidence                23345566666 78999865 8999999999999999999999999998776653 33333432222   458899


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHh
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKI  323 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l  323 (415)
                      .+ .+|+|+||+++++        ++.+.+... ...+...+++++.++.+.++...+ +.+++.++.-++.++.+.+..
T Consensus       268 ~l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~  338 (421)
T PRK09792        268 SL-AGGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAK  338 (421)
T ss_pred             hh-cCCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence            96 4889999999865        566665433 234567889999977766654322 233333322222222222222


Q ss_pred             hcCCCCcCCCCCCC-ceEEEEecCccccC--CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHH
Q 014936          324 KEIPCISCPHKPEG-SMAVMLKLNLSLLD--DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECL  398 (415)
Q Consensus       324 ~~~~~~~~~~~p~~-g~~~~~~l~~~~~~--~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l  398 (415)
                      +++|.+.   .+.+ |+++|+.++.....  .......+...+ .++||.+.+...  ..+.||+.++  .+++++++++
T Consensus       339 ~~~p~v~---~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~~  412 (421)
T PRK09792        339 ESVPAIA---AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRA-LAQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAM  412 (421)
T ss_pred             HhCCCcc---eecccceEEEEEecCCccCCcchHHHHHHHHHH-HHCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHHH
Confidence            2354332   4555 99999998642100  001123444444 567999864221  1478999984  6899999999


Q ss_pred             HHHHHHHH
Q 014936          399 DRIKSFYQ  406 (415)
Q Consensus       399 ~~l~~~~~  406 (415)
                      ++|.+++.
T Consensus       413 ~~l~~~l~  420 (421)
T PRK09792        413 KILQDALS  420 (421)
T ss_pred             HHHHHHHh
Confidence            99998874

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.92  E-value=2e-22  Score=190.05  Aligned_cols=346  Identities=16%  Similarity=0.105  Sum_probs=225.7

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++|+..|.-.... --.+|.+.+++++++.....  ++.. ...+....+++.+....+   ..+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGse  109 (408)
T PRK04612         37 DQGREYLDLAAGIAVCGL-GHNDPDLVAALTEQAGKLWH--TSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTE  109 (408)
T ss_pred             CCCCEEEEcCccHhhccC-CCCCHHHHHHHHHHHHhccc--cccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHH
Confidence            358889999877532211 12479999999999875322  1211 123444556666644222   1279999999999


Q ss_pred             HHHHHHHHhcC----CC-----CEEEEcCCCCcchHHHHHhCCCeEE-E---eeccCC--CCCCCChhHHHhhcCCCceE
Q 014936          112 AIDVAMALLSR----PG-----ANILLPRPGFPIYELSAAFRHIEVR-H---FDLLPD--KGWEVDLDDIESLADQNTVA  176 (415)
Q Consensus       112 al~~~~~~l~~----~g-----d~vi~~~p~y~~~~~~~~~~g~~~~-~---~~~~~~--~~~~~~~~~l~~~~~~~~~~  176 (415)
                      |++.+++....    .|     .+|+....+|++....+........ .   -+..+.  .-...|++.+++.+++++.+
T Consensus       110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a  189 (408)
T PRK04612        110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVA  189 (408)
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEE
Confidence            99999987541    12     3689999999987655433211110 0   000000  00013788899888767788


Q ss_pred             EEecCCCCccccCCC--HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936          177 LVIINPGNPCGNVYS--YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       177 v~i~~p~nptG~~~~--~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      .+++.|.+++|-+++  .+.+++|.++|+++|+++|+||+|.++...|...   .. ...+.+..+.++||.++ +|+|+
T Consensus       190 avi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~---a~-~~~~~~pdi~t~~K~l~-~G~pi  264 (408)
T PRK04612        190 AVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF---AH-WQEQVTPDIVTLAKALG-GGFPI  264 (408)
T ss_pred             EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh---hh-hhcCCCCCEEEEcchhc-CCCce
Confidence            899999887776654  6789999999999999999999999876655321   11 11223456778999975 78999


Q ss_pred             EEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC----CCC
Q 014936          255 GWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI----PCI  329 (415)
Q Consensus       255 G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~  329 (415)
                      ||+++++        ++.+.+... ...+++.+++.+.++.+.|+...+   ++..++++++.+++.+.|+++    +.+
T Consensus       265 ga~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i  333 (408)
T PRK04612        265 GAMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVF  333 (408)
T ss_pred             EEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence            9999865        566666543 233566789999999998865322   245566666666666666553    222


Q ss_pred             cCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          330 SCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       330 ~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      . . ...-|.++-+.+....   ......+.. .+.++||.+.+..    .+.+|+.+  ..+++++++++++|.+++.+
T Consensus       334 ~-~-vrg~Gl~~~i~~~~~~---~~~a~~i~~-~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~~  403 (408)
T PRK04612        334 A-Q-VRGRGLMLGAVLAPAH---AGQAGAILD-LAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALAD  403 (408)
T ss_pred             e-e-eeccceEEEEEecCch---hhHHHHHHH-HHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence            2 1 2344666666663210   011334444 4567899997742    37899997  47899999999999999987


Q ss_pred             HHH
Q 014936          408 HAK  410 (415)
Q Consensus       408 ~~~  410 (415)
                      +.+
T Consensus       404 ~~~  406 (408)
T PRK04612        404 YVA  406 (408)
T ss_pred             Hhh
Confidence            654

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.92  E-value=2e-22  Score=190.62  Aligned_cols=232  Identities=18%  Similarity=0.177  Sum_probs=166.8

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----CCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~----~g~~  147 (415)
                      +++. +...+|++.+|++.        ..+..+++++|++|+..++.++.++||+|+++.+.|+.....+..    .|++
T Consensus        54 r~~~-pt~~~Le~~lA~l~--------g~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~  124 (425)
T PRK06084         54 RIMN-PTNDVLEQRVAALE--------GGVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIE  124 (425)
T ss_pred             CCCC-chHHHHHHHHHHHh--------CCCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeE
Confidence            3344 34678999999987        235677888999999999999999999999999999865554432    4666


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      +..++.       .|++++++++++++++|++++|+||+|.+++   +++|+++|+++|+++|+|++|+....    ..+
T Consensus       125 v~~~d~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~p  190 (425)
T PRK06084        125 TRFAAH-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CRP  190 (425)
T ss_pred             EEEECC-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CCh
Confidence            655542       3899999999889999999999999999976   68888889999999999999985332    112


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC------------hH--------------HHHHHHH-h-hc
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR------------KP--------------KVVERMK-K-YF  279 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~------------~~--------------~~~~~~~-~-~~  279 (415)
                      + .++.+   +++.|++|.++.+|.++|.+++.+....+.            ++              ....... . ..
T Consensus       191 ~-~~gaD---ivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  266 (425)
T PRK06084        191 F-EHGAD---IVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLR  266 (425)
T ss_pred             h-hcCCC---EEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHH
Confidence            2 22333   889999999999999999988753221000            00              0000000 0 11


Q ss_pred             cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          280 DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       280 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ..+...++.....+..-|+.     +..+.++.+++...+.+.|+..|.+..+.+|
T Consensus       267 ~~g~~l~~~~a~l~lrgl~t-----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP  317 (425)
T PRK06084        267 NMGAALSPFNAFLILQGLET-----LALRMERHTENALKVARYLQQHPQVAWVKYA  317 (425)
T ss_pred             hcCCCCCHHHHHHHHcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            23455666666666666655     7788888899999999999988776544444

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.92  E-value=8.3e-23  Score=191.19  Aligned_cols=282  Identities=13%  Similarity=0.161  Sum_probs=195.8

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeecc
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLL  154 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~  154 (415)
                      ..++++.+++++    |    .+++++++++++++.+++. ++++||+|+++.+.|.++..    .+...|+++..++. 
T Consensus        49 ~~~le~~la~l~----g----~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-  118 (378)
T TIGR01329        49 RTALESLLAKLD----K----ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT-  118 (378)
T ss_pred             HHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC-
Confidence            467777777776    2    3567777888889998776 67999999999999987654    34568999988865 


Q ss_pred             CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (415)
Q Consensus       155 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  234 (415)
                            .|++.+++++++++++|++++|+||+|.+.   ++++|+++|+++|+++|+|++++...    ...++ .++.+
T Consensus       119 ------~d~~~le~~i~~~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~~~----~~~~l-~~g~D  184 (378)
T TIGR01329       119 ------TDLDKVKAALGPKTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMSPL----LCNPL-ELGAD  184 (378)
T ss_pred             ------CCHHHHHHhcCcCceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCcccc----cCChh-hcCCc
Confidence                  278999999998999999999999999995   58888999999999999999985422    22223 22333


Q ss_pred             CCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936          235 VPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLL  312 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  312 (415)
                         +++.|++|.++. .+...|+++++++       .+.++++.... .....++.....+...++.     +..+.++.
T Consensus       185 ---i~v~S~tK~l~G~~~~~~G~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t-----l~~R~e~~  249 (378)
T TIGR01329       185 ---IVYHSATKFLAGHSDVMAGVLAVKGE-------EIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT-----LAIRIEKQ  249 (378)
T ss_pred             ---EEEEecceeccCCccceeEEEEeCcH-------HHHHHHHHHHHhcCCcCCHHHHHHHHccCCC-----HHHHHHHH
Confidence               888999998765 3578899988542       35566655543 2344555554444444443     67777888


Q ss_pred             HHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936          313 KQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA  376 (415)
Q Consensus       313 ~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~  376 (415)
                      .++...+.+.|++.|.+..+.+|.                .|..+.+.+.     +.....+++..| +..++.++.|..
T Consensus       250 ~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~-----~~~~~~~~~~~L-~~~~i~~s~G~~  323 (378)
T TIGR01329       250 QENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG-----SVALSKRLVEAT-KLFSITVSFGSV  323 (378)
T ss_pred             HHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC-----CHHHHHHHHHhC-cCcccccCCCCC
Confidence            888888888888766543233321                2334445552     111244666665 677888877764


Q ss_pred             CCC-----------------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          377 VGL-----------------------KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       377 ~~~-----------------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ...                       ++.||+|++..  +.+.+++.|++++++
T Consensus       324 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~  375 (378)
T TIGR01329       324 NSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE--DVDDLISDLDIAFVT  375 (378)
T ss_pred             CceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence            321                       36899999874  566667777776653

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.92  E-value=1.8e-22  Score=188.11  Aligned_cols=284  Identities=13%  Similarity=0.117  Sum_probs=196.8

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~  153 (415)
                      ....|++.+|++.        ..+++++++|+++|+..++.+++++||+|+++++.|++....    +...|+++..++.
T Consensus        51 t~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~  122 (377)
T TIGR01324        51 THFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP  122 (377)
T ss_pred             cHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence            3469999999987        356899999999999999999999999999999999876543    3557888776642


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                      .       +.+.+++++++++++|++.+|+||+|..   .++++|+++|+++|+++|+|++|+.....    .++ .++.
T Consensus       123 ~-------~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~----~pl-~~ga  187 (377)
T TIGR01324       123 L-------IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLF----KPL-EHGV  187 (377)
T ss_pred             C-------CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc----Ccc-ccCc
Confidence            1       2378999999999999999999999888   78999999999999999999999874421    122 2333


Q ss_pred             CCCeEEEccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936          234 TVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNL  311 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  311 (415)
                         .++++|++|.++.+ +.-.|++++++        +.++.++.. .......++.....+...++.     +.-+.++
T Consensus       188 ---Divv~S~tK~l~G~~d~~gG~v~~~~--------~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t-----l~~R~~~  251 (377)
T TIGR01324       188 ---DISIQAGTKYLVGHSDIMIGTVVANA--------RTWDQLREHSYLMGQMVDADDAYTTLRGLRT-----LGVRLKQ  251 (377)
T ss_pred             ---eEEEecCceeccCCCCceEEEEEeCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh-----HHHHHHH
Confidence               38899999998654 46778887654        455555533 233445566655555555543     6667788


Q ss_pred             HHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC
Q 014936          312 LKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT  375 (415)
Q Consensus       312 ~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~  375 (415)
                      ..++...+.+.|++.|.+..+.+|.                .|..+.++++..   +.....+++..+ +-.++.++-|.
T Consensus       252 ~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~---~~~~~~~~~~~l-~~~~~~~slG~  327 (377)
T TIGR01324       252 HQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL---TQKQVHAFLDHL-QLFGLGYSWGG  327 (377)
T ss_pred             HHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC---CHHHHHHHHHhC-CcceEeccCCC
Confidence            8888888999998877664444442                233445556420   001223444443 44455544443


Q ss_pred             CCC-------------------CCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          376 AVG-------------------LKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       376 ~~~-------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      ...                   ..+.||+|++..  +.+.+++.|.++++
T Consensus       328 ~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE--~~~dl~~dl~~al~  375 (377)
T TIGR01324       328 YESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE--NVDDLKADLKAGFE  375 (377)
T ss_pred             ccceeecCCCCCCHHHHHhccCCCCEEEEEeCCC--CHHHHHHHHHHHHh
Confidence            211                   125699999874  45666666666654

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.92  E-value=2.2e-22  Score=192.91  Aligned_cols=355  Identities=16%  Similarity=0.165  Sum_probs=213.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +|+.++||..|.-....+ -.+|.+.+++++++....+....  ....+.+..+|+.+.+..+.+ ..+.++++++|++|
T Consensus        52 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA  127 (451)
T PRK06918         52 DGNQYIDFAGAIGTINVG-HSHPKVKEALHKQVDQYIHTGFN--VMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEA  127 (451)
T ss_pred             CCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHHhccCcccc--ccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHH
Confidence            477899998775322211 24788999999998754321111  111244455555554432211 11589999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCe--------------EEEeeccCC--CCCCCC--------hhHH
Q 014936          113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIE--------------VRHFDLLPD--KGWEVD--------LDDI  166 (415)
Q Consensus       113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~--------------~~~~~~~~~--~~~~~~--------~~~l  166 (415)
                      ++.+++...  ..-.+|+....+|++....+......              +..+|....  ...+..        ++.+
T Consensus       128 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (451)
T PRK06918        128 VENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEF  207 (451)
T ss_pred             HHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHH
Confidence            999998764  12257888999999876655432111              111211100  000110        1223


Q ss_pred             Hhhc----CCCceEEEecCCCCc-cccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936          167 ESLA----DQNTVALVIINPGNP-CGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (415)
Q Consensus       167 ~~~~----~~~~~~v~i~~p~np-tG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (415)
                      ++.+    .+...+.+|..|-+. .|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+.. .++..++....   +
T Consensus       208 ~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD---i  283 (451)
T PRK06918        208 KNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD---L  283 (451)
T ss_pred             HHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC---E
Confidence            3322    234567788888544 4664 45566999999999999999999999998776642 23344442222   4


Q ss_pred             ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  319 (415)
                      .|+||.++ +|+|+||+++++        ++++.+... ...+.+.+++.+.++.+.|+...+..+   .+++++..+++
T Consensus       284 ~t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~---~~~~~~~g~~l  351 (451)
T PRK06918        284 ITVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENL---NDRAIELGKVV  351 (451)
T ss_pred             Eeeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHH
Confidence            48999976 899999999965        577766543 234567899999997777753222222   22233333333


Q ss_pred             HHHhh----cCCCCcCCCCCCCceEEEEecCcc--ccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CCh
Q 014936          320 YNKIK----EIPCISCPHKPEGSMAVMLKLNLS--LLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDP  391 (415)
Q Consensus       320 ~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~--~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~  391 (415)
                      .+.|+    +.+.+..+ .+.++++.|......  ..++......+... +.++||.+.|+..|+  +++|++++  .++
T Consensus       352 ~~~l~~l~~~~~~~~~v-rg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~Gvlv~~~~~~~--~~lrl~p~l~~t~  427 (451)
T PRK06918        352 MNRFEEMKNKYNCIGDV-RGLGAMCAFELVQDRKTKEPDKTLTANICKE-ANKRGLLLLSAGTYG--NVIRVLMPLVITD  427 (451)
T ss_pred             HHHHHHHHhhCCCceee-ccceeEEEEEEccCCCcCCCcHHHHHHHHHH-HHHCCeEEeecCCCC--CEEEEECCCccCH
Confidence            33333    34333312 455566555433211  01000012233333 466899999986554  78999984  689


Q ss_pred             hhHHHHHHHHHHHHHHHHHH
Q 014936          392 YSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       392 ~~l~~~l~~l~~~~~~~~~~  411 (415)
                      +++++++++|.++++++..+
T Consensus       428 ~~id~~l~~l~~~l~~~~~~  447 (451)
T PRK06918        428 EQLEEGLTIIEESLQACYEK  447 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999876443

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.92  E-value=2.3e-22  Score=182.01  Aligned_cols=332  Identities=18%  Similarity=0.195  Sum_probs=239.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~  130 (415)
                      .+.++.+++++......+    ..+  .+.++-+.+.+.++..++.. +.+-+++++++|.+++.++.++.+|||+|++.
T Consensus        14 ~~v~~~V~~am~~~~~~h----~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~   86 (383)
T COG0075          14 VPVPPRVLLAMARPMVGH----RSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV   86 (383)
T ss_pred             CCCCHHHHHHhcCCCCCC----CCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence            556788888776643321    111  22334444444444333422 23566788889999999999999999999999


Q ss_pred             CCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--CceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936          131 RPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (415)
Q Consensus       131 ~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  206 (415)
                      ..+.++  +.+.++.+|+++..+...  .+-.++++++++.++.  ..++|.++|...+||+.   .++++|+++|++||
T Consensus        87 ~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---npl~~I~~~~k~~g  161 (383)
T COG0075          87 VNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---NPLKEIAKAAKEHG  161 (383)
T ss_pred             eCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCccccc---CcHHHHHHHHHHcC
Confidence            888875  567899999999998764  4456899999999984  46788999999999999   67899999999999


Q ss_pred             cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCC-----------CCCChHHHHHH
Q 014936          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPC-----------GMFRKPKVVER  274 (415)
Q Consensus       207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~-----------~~~~~~~~~~~  274 (415)
                      .++|+|.+-+.    |.....+..++-+   +++.+..|++++ ||  +|.+..+++.           ..++-..+.+.
T Consensus       162 ~l~iVDaVsS~----Gg~~~~vd~wgiD---v~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~  232 (383)
T COG0075         162 ALLIVDAVSSL----GGEPLKVDEWGID---VAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKY  232 (383)
T ss_pred             CEEEEEecccC----CCcccchhhcCcc---EEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHH
Confidence            99999999986    3344455556555   777778999865 56  7777765421           22211122222


Q ss_pred             HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEEEEecCccccCC
Q 014936          275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAVMLKLNLSLLDD  352 (415)
Q Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~~~~~~  352 (415)
                      ++....+.++++.....++..+|+...++.++.+.++++++.+.+++.++.+ |++.+..+.  ......+..|.    +
T Consensus       233 ~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~----g  307 (383)
T COG0075         233 MEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPE----G  307 (383)
T ss_pred             HhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCC----C
Confidence            2222233467777777888888887767889999999999999999999998 888553221  11233444554    2


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      . ++.+....+++++|+.+.+|........+||+. + .+.+++..++..|..++.++.
T Consensus       308 ~-~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g  365 (383)
T COG0075         308 V-DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG  365 (383)
T ss_pred             C-CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence            2 344455578888999999888766678999999 4 678999999999999988753

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.92  E-value=4.1e-23  Score=185.93  Aligned_cols=203  Identities=17%  Similarity=0.183  Sum_probs=165.3

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      +.+.+.++.+..     .+.+++|.+++.+.+..    .+...|+  ...+.++.|+.+|+++      +.++.+|++|+
T Consensus        41 ~~~~vyld~~at-----~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFts  109 (428)
T KOG1549|consen   41 GTRPVYLDNQAT-----GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFTS  109 (428)
T ss_pred             CCccEEEecCcC-----CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEEeC
Confidence            556777877762     45678999999887653    2211133  3344789999999999      45888899999


Q ss_pred             ChHHHHHHHHHHhc-CCCC----EEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEe
Q 014936          108 GCTQAIDVAMALLS-RPGA----NILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI  179 (415)
Q Consensus       108 g~~~al~~~~~~l~-~~gd----~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i  179 (415)
                      |+|++++++++... ..+|    +|++.+-.|.+....   ++..|+++..+|+.  +++-+|++.+++.++++|+++.+
T Consensus       110 ~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~I  187 (428)
T KOG1549|consen  110 GATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVSI  187 (428)
T ss_pred             CchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEEE
Confidence            99999999999975 2455    899999999887665   46679999999986  44568999999999999999999


Q ss_pred             cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      .+.+|.+|+.+|   +++|+.+|+++|+.+++|.+|+-    |.-...++.++.+   .+..+.+|+|+.+|  +|++++
T Consensus       188 ~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaLYv  255 (428)
T KOG1549|consen  188 MHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGALYV  255 (428)
T ss_pred             EecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEEEE
Confidence            999999999955   78888899999999999999997    6666677788776   66678999999999  999999


Q ss_pred             eC
Q 014936          260 TD  261 (415)
Q Consensus       260 ~~  261 (415)
                      +.
T Consensus       256 r~  257 (428)
T KOG1549|consen  256 RR  257 (428)
T ss_pred             cc
Confidence            75

>PRK05939 hypothetical protein; Provisional

Probab=99.92  E-value=4.5e-22  Score=186.77  Aligned_cols=226  Identities=16%  Similarity=0.104  Sum_probs=164.4

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccC
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLP  155 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~  155 (415)
                      ...|++.+|++.        ..+..++++++++|+..++.++.++||+|+++++.|++...   .+...|+++..++.  
T Consensus        49 ~~~lE~~la~le--------g~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~--  118 (397)
T PRK05939         49 TAALEAKITKME--------GGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA--  118 (397)
T ss_pred             HHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC--
Confidence            348999999987        23445666677999999999999999999999999976443   45678999888865  


Q ss_pred             CCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          156 DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       156 ~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                           .|++++++++++++++|++.+|+||+|.+   .++++|+++|+++|+++|+|++|+...    ...+ ..++   
T Consensus       119 -----~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~~~~-~~~g---  182 (397)
T PRK05939        119 -----TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----LFRP-KDVG---  182 (397)
T ss_pred             -----CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----ccCc-cccC---
Confidence                 37899999999999999999999999999   789999999999999999999986422    1111 1122   


Q ss_pred             CeEEEccCccccCCCCceEEEEEeeCCCC-------CCC-----h--HHHHHHHHhh--ccccCCchhHHHHHHHHhhCC
Q 014936          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCG-------MFR-----K--PKVVERMKKY--FDILGDPATFIQAAVPSILQQ  299 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~-------~~~-----~--~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~  299 (415)
                      ..+++.|+||.++..|.++|++++.+...       ...     .  ......++..  .......++.....+..-|+.
T Consensus       183 aDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~t  262 (397)
T PRK05939        183 ASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAET  262 (397)
T ss_pred             CEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCc
Confidence            34899999999999999999988753210       000     0  0001122211  123345566666666666654


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          300 PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                           +.-+.++..+++..+.+.|+..|.+..+.+|
T Consensus       263 -----l~~R~~~~~~na~~la~~L~~~p~V~~V~yP  293 (397)
T PRK05939        263 -----LALRVDRSCSNALALAQFLEAHPKVARVYYP  293 (397)
T ss_pred             -----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence                 6677777788999999999988766544454

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.92  E-value=2.3e-22  Score=191.01  Aligned_cols=334  Identities=17%  Similarity=0.155  Sum_probs=216.2

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++||..+...... --.+|++.+++++.++.... .......-..++.+.+++++        ..+.++++++|++
T Consensus        35 ~g~~~lD~~s~~~~~~~-Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~  105 (401)
T TIGR01885        35 EGKRYLDFLSAYSAVNQ-GHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF--------GYDKVLPMNTGAE  105 (401)
T ss_pred             CCCEEEEcccCHhhccC-CCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc--------CCCEEEEeCccHH
Confidence            57889999887532111 12479999999998774221 11001223456666666654        2469999999999


Q ss_pred             HHHHHHHHhcC---------C-CCEEEEcCCCCcch-HHHHHhCCC------------eEEEeeccCCCCCCCChhHHHh
Q 014936          112 AIDVAMALLSR---------P-GANILLPRPGFPIY-ELSAAFRHI------------EVRHFDLLPDKGWEVDLDDIES  168 (415)
Q Consensus       112 al~~~~~~l~~---------~-gd~vi~~~p~y~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~~~~~l~~  168 (415)
                      |+..+++.+..         + .+.|+....+|++. .......+.            .+..+++       .|++.+++
T Consensus       106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~  178 (401)
T TIGR01885       106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE  178 (401)
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence            99999998521         2 35788888888864 333322221            1222221       26788888


Q ss_pred             hcC---CCceEEEecCCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCc
Q 014936          169 LAD---QNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS  244 (415)
Q Consensus       169 ~~~---~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  244 (415)
                      .++   ++..++++..+++++|...+ .+.+++|.++|++||+++|+||+|.++.+.|... .....+..++++   ++|
T Consensus       179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~g  254 (401)
T TIGR01885       179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LLG  254 (401)
T ss_pred             HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Eee
Confidence            774   34445555555889999875 4579999999999999999999998766555432 111122222233   467


Q ss_pred             cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHh
Q 014936          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI  323 (415)
Q Consensus       245 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  323 (415)
                      |.++.+++|+|++++++        ++++.++.. ...+.+.+++.+.++.++|+...++   ...++++++.+++.+.|
T Consensus       255 K~l~~g~~~ig~v~~~~--------~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L  323 (401)
T TIGR01885       255 KALSGGVYPVSAVLADD--------DVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQL  323 (401)
T ss_pred             ccccCCCCCcEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHH
Confidence            99887779999999865        577766542 2234556788888888888653222   34467777788899999


Q ss_pred             hcCCCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHH
Q 014936          324 KEIPCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDR  400 (415)
Q Consensus       324 ~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~  400 (415)
                      ++++ ..++ ..+..|.+..+.++.... + .+..++...+ .++||.+.|+.    ++.+||++  ..+++++++++++
T Consensus       324 ~~l~-~~~~~~~~g~g~~~~i~~~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~  395 (401)
T TIGR01885       324 KKLP-KPIITEVRGRGLLNAIVIDESKT-G-RTAWDLCLKL-KEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEI  395 (401)
T ss_pred             Hhcc-CCceeEEeecCeeEEEEeccCcc-h-hHHHHHHHHH-HhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHH
Confidence            8872 2211 122345555555543210 0 1245666665 56799998753    47899998  4789999999999


Q ss_pred             HHHHH
Q 014936          401 IKSFY  405 (415)
Q Consensus       401 l~~~~  405 (415)
                      |.+++
T Consensus       396 l~~~l  400 (401)
T TIGR01885       396 IKKVI  400 (401)
T ss_pred             HHHHh
Confidence            98765

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.92  E-value=8.9e-22  Score=183.96  Aligned_cols=309  Identities=21%  Similarity=0.273  Sum_probs=197.8

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCC
Q 014936           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP  132 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p  132 (415)
                      .+.-++++.+.+..+.+.  +.    .++++++++++.+..    ..+++++|+|+++++.+++.++ .++||+|+++.+
T Consensus        10 ~~~e~~a~~~~~~~~~~~--~~----g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~   79 (376)
T TIGR02379        10 TGQELEYIAEAISEGKLS--GD----GPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSY   79 (376)
T ss_pred             CHHHHHHHHHHHHcCCcc--CC----cHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence            455688888888765432  11    234444444444332    3578999999999999999887 789999999999


Q ss_pred             CCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936          133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (415)
Q Consensus       133 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  212 (415)
                      +|..+...+...|++++.+++++ +++.+|++++++++++++++|+   |+||+|...   ++.+|.++|+++|+++|+|
T Consensus        80 t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~---d~~~I~~la~~~~i~vIeD  152 (376)
T TIGR02379        80 TFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVAC---DMDTIMALANKHQLFVIED  152 (376)
T ss_pred             CcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCcc---CHHHHHHHHHHCCCEEEEE
Confidence            99999888899999999999875 3477999999999988888876   566789885   4678888899999999999


Q ss_pred             cccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc-------
Q 014936          213 EVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-------  282 (415)
Q Consensus       213 e~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  282 (415)
                      ++|+.+. +.+...   ..+..    +.+.||+  |.+ .+|.+.|++++++       +++.++++......       
T Consensus       153 aa~~~g~~~~~~~~---g~~~~----~~~fSf~~~K~l-~~g~~gG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~  217 (376)
T TIGR02379       153 AAQGVMSTYKGRAL---GSIGH----LGTFSFHETKNY-TSGGEGGALLIND-------QAFIERAEIIREKGTNRSQFF  217 (376)
T ss_pred             CccccCCccCCccc---CCCCC----EEEEeCCCCCcC-cccCCceEEEECC-------HHHHHHHHHHHHhCCCCcccc
Confidence            9999865 544322   22221    3333433  663 5677889998875       35666666543211       


Q ss_pred             ---------------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC--C-CcCCCCCCC---c-eE
Q 014936          283 ---------------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP--C-ISCPHKPEG---S-MA  340 (415)
Q Consensus       283 ---------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~~---g-~~  340 (415)
                                     ...+.+....+...|     +.+++..++.+++.+...+.|..++  + +.....|.+   . .+
T Consensus       218 ~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL-----~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~  292 (376)
T TIGR02379       218 RGEVDKYTWRDIGSSYLPSELQAAYLWAQL-----EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHM  292 (376)
T ss_pred             ccCCCcceeeeecccCCccHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEE
Confidence                           011112211111223     3355555666666666666666543  1 221111222   1 23


Q ss_pred             EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC----------CC------------CCeEEEEe--eCChhhHHH
Q 014936          341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV----------GL------------KNWLRVTF--AVDPYSLEE  396 (415)
Q Consensus       341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~----------~~------------~~~iRi~~--~~~~~~l~~  396 (415)
                      +++.++..     .+..++... |+++||.+.++...          ..            ...+.+-+  ..++++++.
T Consensus       293 ~~i~~~~~-----~~r~~l~~~-L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~  366 (376)
T TIGR02379       293 FYIKLKDE-----DDRNELIKY-LKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQAR  366 (376)
T ss_pred             EEEEECCc-----CCHHHHHHH-HHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHH
Confidence            34555431     134455555 47789987643210          00            12355555  368899999


Q ss_pred             HHHHHHHHH
Q 014936          397 CLDRIKSFY  405 (415)
Q Consensus       397 ~l~~l~~~~  405 (415)
                      .++.|++++
T Consensus       367 i~~~i~~~~  375 (376)
T TIGR02379       367 VIQTICDYL  375 (376)
T ss_pred             HHHHHHHHh
Confidence            999988754

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.92  E-value=3.9e-22  Score=189.37  Aligned_cols=348  Identities=17%  Similarity=0.169  Sum_probs=218.6

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++|+..|.-.... --.+|.+.+++++++.+.....+..  ...+.+..+|+.+.+..+ .-..+.++++++|++
T Consensus        37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse  112 (421)
T PRK06777         37 VEGREYIDFAAGIAVLNT-GHRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAP-IDGPAKTAFFTTGAE  112 (421)
T ss_pred             CCCCEEEEcccCHHhhcc-CCCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCC-CCCCceEEEeCCcHH
Confidence            358889999877522111 1247889999999988643322211  112233344444443221 012468999999999


Q ss_pred             HHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhC-CCe-------------EEEeeccCCCCCC----CChhHHHhhcC
Q 014936          112 AIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFR-HIE-------------VRHFDLLPDKGWE----VDLDDIESLAD  171 (415)
Q Consensus       112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~----~~~~~l~~~~~  171 (415)
                      |++.+++.... .| .+|+....+|++....+... +..             +..++. ++....    .+++.+++.++
T Consensus       113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~  191 (421)
T PRK06777        113 AVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVSVEEALSSVERLFK  191 (421)
T ss_pred             HHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcCHHHHHHHHHHHHH
Confidence            99999987641 22 47889999999876655432 210             011111 100000    12556777664


Q ss_pred             ----CCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          172 ----QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       172 ----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                          +...+.++..| ++..|. ++|.+.+++|.++|++||+++|.||+|.++.+.+.. .....++....++   ++||
T Consensus       192 ~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~sK  267 (421)
T PRK06777        192 ADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMAK  267 (421)
T ss_pred             hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eeeh
Confidence                23345566677 667785 588999999999999999999999999987766642 2233333323333   7899


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      .++ +|+|+||+++++        ++++.+... ...+.+.+++++.++.+.|+...+   ++..++++++.+++.+.|+
T Consensus       268 ~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~  335 (421)
T PRK06777        268 SLG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLE  335 (421)
T ss_pred             hhc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence            987 899999999965        576666543 234567899999999999864321   3456666677777777666


Q ss_pred             cC----CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHH---HhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHH
Q 014936          325 EI----PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL---AKEESVIILPGTAVGLKNWLRVTF--AVDPYSLE  395 (415)
Q Consensus       325 ~~----~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l---l~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~  395 (415)
                      ++    |.+. ...+.+. ++.+.+..... +. ++.++...+   +.++||.+.|+..|+  +++||.+  ..++++++
T Consensus       336 ~l~~~~~~i~-~vrg~G~-~~~i~~~~~~~-~~-~~~~~~~~l~~~~~~~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i~  409 (421)
T PRK06777        336 KAKASCPAIV-DIRARGS-MVAVEFNDPQT-GK-PSPEFTRQYQRQALEEGLLLLSCGVHG--NVIRFLYPLTIPDAQFS  409 (421)
T ss_pred             HHHHhCCCeE-EecCceE-EEEEEEecCcc-CC-ccHHHHHHHHHHHHhCCeEEeecCCCC--CEEEEeCCCCCCHHHHH
Confidence            53    4333 2244544 44444432110 11 122222222   456899999987654  6899999  47899999


Q ss_pred             HHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQ  406 (415)
Q Consensus       396 ~~l~~l~~~~~  406 (415)
                      +++++|.+++.
T Consensus       410 ~~~~~l~~~l~  420 (421)
T PRK06777        410 KALNILTRLLA  420 (421)
T ss_pred             HHHHHHHHHHh
Confidence            99999998864

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.92  E-value=7e-22  Score=185.74  Aligned_cols=281  Identities=15%  Similarity=0.146  Sum_probs=187.6

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~  153 (415)
                      ...++++.+|++.+      .+ +. +++++|+.++.+++. +.++||+|+++.|.|++..    ..++..|+++..++.
T Consensus        55 ~~~~le~~lA~l~g------~~-~~-v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~  125 (390)
T PRK08064         55 TREALEDIIAELEG------GT-KG-FAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM  125 (390)
T ss_pred             hHHHHHHHHHHHhC------CC-Ce-EEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence            46789999999873      23 34 555666788888886 6689999999999998544    345668999988865


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                             .|++.+++.+++++++|++++|+||||.+.   ++++|.++|+++|+++|+|++|+.+...    .++ .++.
T Consensus       126 -------~d~~~l~~~l~~~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~g~  190 (390)
T PRK08064        126 -------TNLEEVAQNIKPNTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DLGA  190 (390)
T ss_pred             -------CCHHHHHHhcCCCceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCccccc----Cch-hhCC
Confidence                   268999999988999999999999999995   5778888888999999999998764321    112 2232


Q ss_pred             CCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936          234 TVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFFKKTLNL  311 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  311 (415)
                         .+++.|++|.++. +|.-.|++++.+       +++.+.++..... ....++.....+..-+     +.+..+.++
T Consensus       191 ---Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl-----~tl~~R~~~  255 (390)
T PRK08064        191 ---DVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNSFGAVLGVQDCWLVLRGL-----KTLHVRLEH  255 (390)
T ss_pred             ---cEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHccc-----CcHHHHHHH
Confidence               3788999999764 445678777653       2577777666442 2333333333332223     336777788


Q ss_pred             HHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCe---EEE
Q 014936          312 LKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV---IIL  372 (415)
Q Consensus       312 ~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi---~v~  372 (415)
                      ..+++..+.+.|++.|.+..+.+|.                .|..+.+.++        + .+.+..++...++   .++
T Consensus       256 ~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~--------~-~~~~~~f~~~l~l~~~~~s  326 (390)
T PRK08064        256 SSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ--------S-EEAVRQFVSHVKLPVFAVS  326 (390)
T ss_pred             HHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC--------C-HHHHHHHHHhCCcceEccc
Confidence            8888888899998776544333331                2334444553        1 2234455566666   455


Q ss_pred             cCCC------------CC----------C-CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          373 PGTA------------VG----------L-KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       373 ~g~~------------~~----------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      -|..            +.          . ++.+|+|++..  +.+..++.|.+++++.
T Consensus       327 ~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle--~~~dli~dl~~Al~~~  383 (390)
T PRK08064        327 LGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLE--NVDDLIADFEQALSYV  383 (390)
T ss_pred             CCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHhc
Confidence            5521            11          1 46799999863  4455555666565543

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.92  E-value=1.5e-22  Score=192.86  Aligned_cols=347  Identities=19%  Similarity=0.103  Sum_probs=215.8

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++||..|.+....+. .+|.+.+++.+++..... .|.+..+..+|.+.+++.+    .   ..+.+++++||++
T Consensus        47 ~dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~~~~~-~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGse  117 (426)
T PRK00062         47 VDGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAEKGLS-FGAPTELEVELAELVIELV----P---SIEMVRMVNSGTE  117 (426)
T ss_pred             CCCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHHhCCc-CCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHH
Confidence            35889999998865433222 679999999999886432 3344445556666666654    1   3578999999999


Q ss_pred             HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhC-CC-------eE-----EEeeccCCCCCCCChhHHHhhcCC--Cc
Q 014936          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI-------EV-----RHFDLLPDKGWEVDLDDIESLADQ--NT  174 (415)
Q Consensus       112 al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~-g~-------~~-----~~~~~~~~~~~~~~~~~l~~~~~~--~~  174 (415)
                      |+..+++....  ..++|+..+++|+++...+... |.       ..     ..+..........|++.+++.++.  ..
T Consensus       118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~  197 (426)
T PRK00062        118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDE  197 (426)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCc
Confidence            99999998542  2578999999999976444322 10       00     000000000001368888877742  23


Q ss_pred             eEEEecCC-CCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          175 VALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       175 ~~v~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      .+.+++.| ...+|.+.+ .+.+++|.++|++||+++|+||+|.++.. +.. .....++..+.   +.++||.++ .|+
T Consensus       198 ~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~~-~~~~~~~~~pD---i~~~gK~l~-~G~  271 (426)
T PRK00062        198 IAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-ALG-GAQGYYGVTPD---LTTLGKIIG-GGL  271 (426)
T ss_pred             EEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CCc-cHHHHhCCCcc---hHhhhhHhh-CCC
Confidence            34455555 445787765 88899999999999999999999997733 321 11112222111   458899976 789


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                      ++|++++++        ++.+.+...    ...+.+.+++.+.++.+.|+...+ +..++..+.....++.+.+..++. 
T Consensus       272 p~ga~~~~~--------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-  342 (426)
T PRK00062        272 PVGAFGGRR--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKA-  342 (426)
T ss_pred             cceeeeEHH--------HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc-
Confidence            999998865        677777422    122456788899888888865322 234444444444444444444445 


Q ss_pred             CCcCCCCCCCceEEEEecCccccCC-----CCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHH
Q 014936          328 CISCPHKPEGSMAVMLKLNLSLLDD-----IID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLD  399 (415)
Q Consensus       328 ~~~~~~~p~~g~~~~~~l~~~~~~~-----~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~  399 (415)
                      ++. ......|.++-+.+.......     ..+   ...+...+ .++||.+.|..    .+.+++++..++++++++++
T Consensus       343 ~~~-~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~~~  416 (426)
T PRK00062        343 GIP-LTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAM-LDEGVYLAPSQ----FEAGFVSAAHTDEDIEKTLE  416 (426)
T ss_pred             CCc-eEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHH-HHCCeEeecCC----cCceeeeccCCHHHHHHHHH
Confidence            333 112334555555553211000     001   13455444 56799998743    24567888889999999999


Q ss_pred             HHHHHHHHH
Q 014936          400 RIKSFYQRH  408 (415)
Q Consensus       400 ~l~~~~~~~  408 (415)
                      +|.++++++
T Consensus       417 ~l~~~l~~~  425 (426)
T PRK00062        417 AARKAFAAL  425 (426)
T ss_pred             HHHHHHHhh
Confidence            999988753

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.91  E-value=7.8e-22  Score=184.77  Aligned_cols=302  Identities=19%  Similarity=0.178  Sum_probs=202.5

Q ss_pred             HHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCcch
Q 014936           59 EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIY  137 (415)
Q Consensus        59 ~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~y~~~  137 (415)
                      +++.+.+..+.+   .......++++.++++++        .+++++++|+++++..++.++ .++||+|+++.++|..+
T Consensus         3 ~~~~~~~~~~~~---~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~   71 (352)
T cd00616           3 EAVEEVLDSGWL---TLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT   71 (352)
T ss_pred             HHHHHHHHcCCc---cCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence            455566655433   222357899999999982        357888899999999999998 58999999999999999


Q ss_pred             HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC
Q 014936          138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH  217 (415)
Q Consensus       138 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~  217 (415)
                      ...+...|+++..+++++ +++.+|++.+++.++++++++++++   ++|...   ++++|.++|+++|+++|+|++|+.
T Consensus        72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~  144 (352)
T cd00616          72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPA---DMDAIMAIAKRHGLPVIEDAAQAL  144 (352)
T ss_pred             HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcC---CHHHHHHHHHHcCCeEEEECCCCC
Confidence            999999999999998854 3567899999999988889888765   688874   477788888999999999999986


Q ss_pred             cccCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc--------------
Q 014936          218 LVFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--------------  281 (415)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  281 (415)
                      +.....  ..+..+.    .+.+.|++  |.+  ++.+.|++++++       +++.+.++.....              
T Consensus       145 g~~~~~--~~~~~~~----d~~~~S~~~~K~~--~~~~gg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (352)
T cd00616         145 GATYKG--RKVGTFG----DAGAFSFHPTKNL--TTGEGGAVVTND-------EELAERARLLRNHGRDRDRFKYEHEIL  209 (352)
T ss_pred             CCeECC--EEcccCc----ceeEEcCCCCCCC--cccCceEEEECC-------HHHHHHHHHHHHcCCCCCCCcccccee
Confidence            432111  1111111    15566766  886  344568888754       2455555433110              


Q ss_pred             --cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----CceEEEEecCccccCCCCC
Q 014936          282 --LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GSMAVMLKLNLSLLDDIID  355 (415)
Q Consensus       282 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~~l~~~~~~~~~~  355 (415)
                        +...+..........+     ..+++..++.+++.+++.+.|++++++..+..+.    ....+.+.++..   ...+
T Consensus       210 ~~~~~~~~~~aa~~~~~l-----~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  281 (352)
T cd00616         210 GYNYRLSEIQAAIGLAQL-----EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE---AGES  281 (352)
T ss_pred             eeccCcCHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc---CCCC
Confidence              1112222222222222     3467777888899999999999988887442222    123344444420   0124


Q ss_pred             HHHHHHHHHhhcCeEEEcCCCCC----------------C-------CCeEEEEee--CChhhHHHHHHHHH
Q 014936          356 DIDFCFKLAKEESVIILPGTAVG----------------L-------KNWLRVTFA--VDPYSLEECLDRIK  402 (415)
Q Consensus       356 ~~~~~~~ll~~~gi~v~~g~~~~----------------~-------~~~iRi~~~--~~~~~l~~~l~~l~  402 (415)
                      ..++...| +++||.+.......                .       .+.+|+++.  .++++++.+++.|+
T Consensus       282 ~~~v~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         282 RDELIEAL-KEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             HHHHHHHH-HHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence            55666665 66799765322110                0       257999994  78999999988763

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.91  E-value=2.2e-22  Score=176.75  Aligned_cols=327  Identities=17%  Similarity=0.162  Sum_probs=218.9

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHH
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM  117 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~  117 (415)
                      ++|.+.+     .-.++|++.+++.+.-.. ....|++.+-...+++.+++.+        ..+.++++++||+++.+++
T Consensus         2 ~~f~SDn-----~~g~~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~--------g~~a~~Fv~sGT~aN~lal   67 (342)
T COG2008           2 IDFRSDN-----VAGPTPEMREALAAANAV-GDDVYGEDPTTNALEQRIAELF--------GKEAALFVPSGTQANQLAL   67 (342)
T ss_pred             CccccCc-----cCCCCHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHHh--------CCceEEEecCccHHHHHHH
Confidence            4555555     145789999999887532 2347887766777777777776        2389999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCCcchHHH--HHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccC
Q 014936          118 ALLSRPGANILLPRPGFPIYELS--AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNV  189 (415)
Q Consensus       118 ~~l~~~gd~vi~~~p~y~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~  189 (415)
                      .+.++||..|++..-.|-...++  ...++ .+..++..+..+..+++++++..+.+      .+.++++.+++|..|++
T Consensus        68 ~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV  146 (342)
T COG2008          68 AAHCQPGESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV  146 (342)
T ss_pred             HHhcCCCCeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence            99999999999999988765543  22222 22233444545678999999997763      24556666666688999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      +|.+++++|+++|+++|+.+++|.+--+....... .+...+...-.++++ ++||..+.+   +|.++..+       .
T Consensus       147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D~v~~-~~tK~g~~~---~gAiv~gn-------~  214 (342)
T COG2008         147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALG-VALKTIKSYVDSVSF-CLTKGGGAP---VGAIVFGN-------R  214 (342)
T ss_pred             cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC-CCHHHHHhhCCEEEE-ecccCCcce---eeeEEEcC-------H
Confidence            99999999999999999999999987654322212 222223222233444 689995444   58888765       3


Q ss_pred             HHHHHHHhhccccCCc---hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecC
Q 014936          270 KVVERMKKYFDILGDP---ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLN  346 (415)
Q Consensus       270 ~~~~~~~~~~~~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~  346 (415)
                      +++++++......++.   ..+...+...+|++   +.......+-.+.+..+.+.|+..||++ +..|...+.++++++
T Consensus       215 ~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~-~~~~~~tN~vf~~l~  290 (342)
T COG2008         215 DFAKRARRWRKRAGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVK-LAFPVETNMVFVRLP  290 (342)
T ss_pred             HHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCce-eccCCcccEEEEECC
Confidence            6777777664333332   22233333444544   4444555666667889999999888998 446678889999987


Q ss_pred             ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936          347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~  405 (415)
                      ....     ........+...|+.+.+++     .-+|+.++  ++++++++++..++.++
T Consensus       291 ~~~i-----~~l~~~~~~~~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         291 ESAI-----EALRLAGALFYRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             hHHH-----HHHHhhchhheeeeeccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence            4211     11111112233344443322     36899884  78999999999888764

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.91  E-value=2.7e-21  Score=184.10  Aligned_cols=350  Identities=16%  Similarity=0.140  Sum_probs=213.9

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++|+..|.-.... --.+|.+.+++.+++.....  +.......+.+.++|+.+.+..+  ..-+.++++++|++
T Consensus        38 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsE  112 (443)
T PRK08360         38 IEGNEYIDFLSDAAVQNV-GHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSD  112 (443)
T ss_pred             CCCCEEEEccccHhhccc-CCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHH
Confidence            358899999888422111 12479999999999875322  12111223445555555554322  12368999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHh-CCC------------eEEEeeccCCC--CCC--------CChhHH
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHI------------EVRHFDLLPDK--GWE--------VDLDDI  166 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~--------~~~~~l  166 (415)
                      |++.+++...  ..-..|+....+|++....+.. .|.            .+..++.....  .+.        .+++.+
T Consensus       113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (443)
T PRK08360        113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI  192 (443)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence            9999998764  1225788888888876543322 121            11222211000  000        123445


Q ss_pred             HhhcCC----CceEEEecCC-CCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936          167 ESLADQ----NTVALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (415)
Q Consensus       167 ~~~~~~----~~~~v~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (415)
                      ++.++.    ...+.++..| +||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.|... ....++..++++  
T Consensus       193 ~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii--  269 (443)
T PRK08360        193 KEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII--  269 (443)
T ss_pred             HHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE--
Confidence            555531    2334455567 699999876 5579999999999999999999999877666432 222223333333  


Q ss_pred             ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  319 (415)
                       ++||.++ +|+|+||+++++        ++++.+... ...+...+++.+.++.+.|+...++   +..++++++-+++
T Consensus       270 -tlsK~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l  336 (443)
T PRK08360        270 -TLGKPLG-GGLPISATIGRA--------EIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEK---NLLKRAEKLGNYT  336 (443)
T ss_pred             -Eeccccc-CCceeEEEEEcH--------HHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHH
Confidence             6799976 899999999865        677777544 2335667888898888888653221   2344555555555


Q ss_pred             HHHhhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCC
Q 014936          320 YNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVD  390 (415)
Q Consensus       320 ~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~  390 (415)
                      .+.|++    .|.+. . ...-|.++-+.+.....   .+......+... +.++||.+.+..    .+.+|+++  .++
T Consensus       337 ~~~L~~l~~~~~~v~-~-vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~~----~~~lr~~P~l~~t  409 (443)
T PRK08360        337 KKRLEEMKKKHELIG-D-VRGIGLMIGVDLVKDRETKERAYEEAAKVVWR-AWELGLIVTFFS----GNVLRIQPPLTIE  409 (443)
T ss_pred             HHHHHHHHHhCCCee-e-eeccceEEEEEEecCCcccCccHHHHHHHHHH-HHHCCeEEeecC----CCEEEEeCCCCCC
Confidence            555543    43222 1 23456666666532110   000012244444 466799986532    37899977  579


Q ss_pred             hhhHHHHHHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       391 ~~~l~~~l~~l~~~~~~~~  409 (415)
                      ++++++++++|.++++...
T Consensus       410 ~~~id~~~~~l~~~l~~~~  428 (443)
T PRK08360        410 KEVLDEGLDILEEAIEDVE  428 (443)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998754

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.91  E-value=1.4e-21  Score=182.60  Aligned_cols=226  Identities=17%  Similarity=0.152  Sum_probs=160.6

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g  145 (415)
                      +.+|+++ ...+|++.+|++.+        .+..+++++|+.++..++ .++++||+|+++.|+|++...    .+...|
T Consensus        44 y~r~~~p-~~~~Le~~lA~l~g--------~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G  113 (377)
T PRK07671         44 YSRTGNP-TRAALEELIAVLEG--------GHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFG  113 (377)
T ss_pred             cCCCCCh-HHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCC
Confidence            3445543 46889999999872        233455666677887765 567899999999999985443    334578


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.       .|++++++++++++++|++++|+||+|.+   .++++|+++|+++|+++|+|++|+...+. .  
T Consensus       114 ~~v~~v~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~--  180 (377)
T PRK07671        114 IEHTFVDT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQ-S--  180 (377)
T ss_pred             eEEEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccC-C--
Confidence            88888753       37899999999999999999999999998   56888888889999999999999753322 1  


Q ss_pred             ccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                       ++ .++.   .+++.|+||.++.++ .-.|++++++       +++.+.++..... ....++.....+..-++     
T Consensus       181 -p~-~~g~---Divv~S~sK~l~G~~~~~~G~~v~~~-------~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~-----  243 (377)
T PRK07671        181 -PI-SLGA---DIVLHSATKYLGGHSDVVAGLVVVNS-------PELAEDLHFVQNSTGGILGPQDSWLLLRGLK-----  243 (377)
T ss_pred             -hh-hhCC---eEEEecCcccccCCccceeEEEEeCc-------HHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC-----
Confidence             22 2222   388999999987554 3456666644       2466666655432 34455555554444443     


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      -+..+.++..++...+.+.|++.|++..+.+|
T Consensus       244 tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p  275 (377)
T PRK07671        244 TLGIRMEEHETNSRAIAEFLNNHPAVNKVYYP  275 (377)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence            36668888889999999999987766544444

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.91  E-value=3.1e-21  Score=181.23  Aligned_cols=310  Identities=18%  Similarity=0.252  Sum_probs=196.9

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG  133 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~  133 (415)
                      +.-.+++.+.+..+..  |+.    .++++++++++++..|    .+++++++|+++++.+++.++ .++||+|+++.|+
T Consensus        11 ~~~~~~~~~~l~~~~~--~g~----~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t   80 (375)
T PRK11706         11 GTELDYIQQAMSSGKL--CGD----GGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT   80 (375)
T ss_pred             HHHHHHHHHHHHcCCc--cCC----CHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCC
Confidence            4456777777775443  332    2445555555544333    469999999999999887766 6899999999999


Q ss_pred             CcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (415)
Q Consensus       134 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  213 (415)
                      |..+...+...|++++.+++++ +++.+|++++++++++++++|++++   ++|..   .++.+|.++|+++|+++|+|+
T Consensus        81 ~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~---~~~~~i~~la~~~~i~vIeD~  153 (375)
T PRK11706         81 FVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPVH---YAGVA---CEMDTIMALAKKHNLFVVEDA  153 (375)
T ss_pred             cHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEeC---CCCCc---cCHHHHHHHHHHcCCEEEEEC
Confidence            9999999999999999999865 3467899999999988899888765   58877   457888899999999999999


Q ss_pred             ccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc--------
Q 014936          214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL--------  282 (415)
Q Consensus       214 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  282 (415)
                      +|+.+. +++..   +..+..    +.+.||+  |.++ +|.+.+++..++        ++.++++......        
T Consensus       154 a~a~g~~~~~~~---~g~~~~----~~~~Sf~~~K~l~-~g~gG~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~  217 (375)
T PRK11706        154 AQGVMSTYKGRA---LGTIGH----IGCFSFHETKNYT-AGEGGALLINDP--------ALIERAEIIREKGTNRSQFFR  217 (375)
T ss_pred             ccccccccCCee---eecCcC----EEEEeCCCCcccc-ccCCeEEEECCH--------HHHHHHHHHHHcCCCcchhhc
Confidence            999876 34332   222221    4444555  9864 466666665432        5666554443210        


Q ss_pred             ----------CCchhHHH-HHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCCCCC----CceEEEEe
Q 014936          283 ----------GDPATFIQ-AAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP---CISCPHKPE----GSMAVMLK  344 (415)
Q Consensus       283 ----------~~~~~~~~-~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~----~g~~~~~~  344 (415)
                                .+.+.... ..++-.+..  -..+++..++.+++.+.+.+.|..++   .+.....|.    ...++++.
T Consensus       218 ~~~~~~~~~~~g~~~~~~~~~aa~~~~q--l~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (375)
T PRK11706        218 GQVDKYTWVDIGSSYLPSELQAAYLWAQ--LEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIK  295 (375)
T ss_pred             cCCCcceeeecccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEE
Confidence                      11221111 111111111  13466677777777778888887764   233111222    23355666


Q ss_pred             cCccccCCCCCHHHHHHHHHhhcCeEEEcCCC----------CC-----C-------CCeEEEEe--eCChhhHHHHHHH
Q 014936          345 LNLSLLDDIIDDIDFCFKLAKEESVIILPGTA----------VG-----L-------KNWLRVTF--AVDPYSLEECLDR  400 (415)
Q Consensus       345 l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~----------~~-----~-------~~~iRi~~--~~~~~~l~~~l~~  400 (415)
                      ++..     .+..++...+ .++||.+.....          ++     .       ...+-+-+  ..++++++..++.
T Consensus       296 ~~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~  369 (375)
T PRK11706        296 LRDL-----EDRSALINFL-KEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDT  369 (375)
T ss_pred             ECCc-----CCHHHHHHHH-HHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHH
Confidence            6531     1344555554 677998653210          00     0       23344444  3578899999888


Q ss_pred             HHHHH
Q 014936          401 IKSFY  405 (415)
Q Consensus       401 l~~~~  405 (415)
                      |++++
T Consensus       370 i~~~~  374 (375)
T PRK11706        370 ILEFF  374 (375)
T ss_pred             HHHHh
Confidence            88754

>PLN02509 cystathionine beta-lyase

Probab=99.91  E-value=2.5e-21  Score=183.43  Aligned_cols=228  Identities=16%  Similarity=0.166  Sum_probs=162.5

Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCC
Q 014936           71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHI  146 (415)
Q Consensus        71 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~  146 (415)
                      ..|... |.+ .++.+++++++..+    .++.++++|+++++.+++ .++++||+|+++.+.|+++..    .+...|+
T Consensus       125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~  197 (464)
T PLN02509        125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV  197 (464)
T ss_pred             CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence            356653 543 56666666655433    566778888889987666 567999999999999998763    3456788


Q ss_pred             eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936          147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV  226 (415)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  226 (415)
                      ++..++.       .|++++++++++++++|++++|+||+|.+   .++++|+++|+++|+++|+|++|+.....    .
T Consensus       198 ~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~----~  263 (464)
T PLN02509        198 VVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVLS----R  263 (464)
T ss_pred             EEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccccC----C
Confidence            8887753       37899999999899999999999999997   88999999999999999999998754321    1


Q ss_pred             cccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHHH
Q 014936          227 PMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVF  304 (415)
Q Consensus       227 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~  304 (415)
                      ++ .++.   .++++|++|.++.+| .-.|.++++++       .+.+.++..... ....++.....+...|+     .
T Consensus       264 pl-~~ga---Divv~S~tK~l~G~gdv~gG~v~~~~~-------~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~-----t  327 (464)
T PLN02509        264 PL-ELGA---DIVMHSATKFIAGHSDVMAGVLAVKGE-------KLAKEVYFLQNSEGSGLAPFDCWLCLRGIK-----T  327 (464)
T ss_pred             hh-hcCC---cEEEecCcccccCCCccceeEEEeccH-------HHHHHHHHHHHhcCCCcCHHHHHHHHhhhh-----h
Confidence            22 1222   288899999976644 33566665431       344444333221 23345555555555554     4


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +..+.++.++++..+.+.|++.|.+..+.+|
T Consensus       328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yP  358 (464)
T PLN02509        328 MALRIEKQQENARKIAMYLSSHPRVKKVYYA  358 (464)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence            7888899999999999999988877545555

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.91  E-value=2.1e-21  Score=182.38  Aligned_cols=310  Identities=14%  Similarity=0.131  Sum_probs=203.6

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG  133 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~  133 (415)
                      +.-++++.+.+..+.+ .+++  ...+|++.+|++++        .+++++++|+++|+.+++.++ +++||+|+++.++
T Consensus        14 ~~e~~~~~~~l~~~~~-~~g~--~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~   82 (379)
T PRK11658         14 DEELAAVKEVLRSGWI-TTGP--KNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLT   82 (379)
T ss_pred             HHHHHHHHHHHHcCCc-cCCH--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence            5567788888776543 3333  46899999999983        346888999999999999999 7999999999999


Q ss_pred             CcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (415)
Q Consensus       134 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  213 (415)
                      |..+...+...|++++.+++++ +++.+|++.+++++++++++|+   |+|++|..   .++++|+++|+++|+++|+|+
T Consensus        83 ~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~---~d~~~i~~~a~~~gi~vi~D~  155 (379)
T PRK11658         83 WVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAP---ADLDAIRAIGERYGIPVIEDA  155 (379)
T ss_pred             HHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCc---CCHHHHHHHHHHcCCeEEEEC
Confidence            9999999999999999999865 4467899999999988898877   55568987   457788899999999999999


Q ss_pred             ccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCC--------
Q 014936          214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGD--------  284 (415)
Q Consensus       214 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  284 (415)
                      +|+... +.+..   +...+     +.+.||++...+++.+.|++++++       +++.++++........        
T Consensus       156 a~a~g~~~~~~~---~g~~g-----~~~~Sf~~~K~l~~g~GG~v~~~~-------~~~~~~~~~~~~~G~~~~~~~~~~  220 (379)
T PRK11658        156 AHAVGTYYKGRH---IGARG-----TAIFSFHAIKNITCAEGGLVVTDD-------DELADRLRSLKFHGLGVDAFDRQT  220 (379)
T ss_pred             CCccCCeECCee---cCCCC-----CEEEeCCCCCcCcccCceEEEECC-------HHHHHHHHHHHHcCCCcchhhhhc
Confidence            998643 33321   22222     134566654445667788888754       2466655543211100        


Q ss_pred             -------------ch-hH--HHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC----ceE-EEE
Q 014936          285 -------------PA-TF--IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG----SMA-VML  343 (415)
Q Consensus       285 -------------~~-~~--~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~----g~~-~~~  343 (415)
                                   .+ .+  .++|+. ...   .+.+++..++.+++.+.+.+.|+.++... +..|..    .++ +.+
T Consensus       221 ~~~~~~~~~~~~G~n~~~~~l~AAl~-~~q---l~~l~~~~~~r~~~a~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~  295 (379)
T PRK11658        221 QGRAPQAEVLTPGYKYNLADINAAIA-LVQ---LAKLEALNARRREIAARYLQALADLPFQP-LSLPAWPHQHAWHLFII  295 (379)
T ss_pred             ccCCCcceeeccccccCcCHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CcCCCCCCceeEEEEEE
Confidence                         00 01  122222 111   24577788888888888889998875433 212221    222 223


Q ss_pred             ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC-------CC-------C-------CCeEEEEe--eCChhhHHHHHHH
Q 014936          344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA-------VG-------L-------KNWLRVTF--AVDPYSLEECLDR  400 (415)
Q Consensus       344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-------~~-------~-------~~~iRi~~--~~~~~~l~~~l~~  400 (415)
                      .++.... + .+..++...| +++||.+.+...       |.       .       ...+-+-+  ..++++++..++.
T Consensus       296 ~~~~~~~-~-~~r~~~~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~  372 (379)
T PRK11658        296 RVDEERC-G-ISRDALMEAL-KERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITA  372 (379)
T ss_pred             EECCccc-c-CCHHHHHHHH-HHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHH
Confidence            3432100 1 1345565655 677987652210       00       0       23344444  3678999999998


Q ss_pred             HHHHH
Q 014936          401 IKSFY  405 (415)
Q Consensus       401 l~~~~  405 (415)
                      |++++
T Consensus       373 i~~~~  377 (379)
T PRK11658        373 LQQIA  377 (379)
T ss_pred             HHHHH
Confidence            88764

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.91  E-value=4.8e-21  Score=178.01  Aligned_cols=204  Identities=16%  Similarity=0.141  Sum_probs=153.4

Q ss_pred             cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       102 ~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      ..+++++|++|+..++.+++++||+|+++.|.|+++..    .++..|+++..++..       +.+.+++++++++++|
T Consensus        81 ~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-------~~e~l~~al~~~TklV  153 (395)
T PRK05967         81 GTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-------IGAGIAKLMRPNTKVV  153 (395)
T ss_pred             CEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-------CHHHHHHhcCcCceEE
Confidence            44566668999999999999999999999999998765    457789988887431       3577999999999999


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGW  256 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~  256 (415)
                      ++.+|+||++.+   .++++|+++|+++|+++++|++|+...+    ..++ .++.+   +++.|++|.++. ++.-.|+
T Consensus       154 ~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~----~~pl-~~GaD---ivv~S~tKy~~Gh~d~~~G~  222 (395)
T PRK05967        154 HTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLY----FRPL-DFGVD---ISIHAATKYPSGHSDILLGT  222 (395)
T ss_pred             EEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCcee----cChh-HcCCC---EEEEecccccCCCCCeeEEE
Confidence            999999998766   8999999999999999999999976331    1122 23444   889999998654 4466776


Q ss_pred             EEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          257 FVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ++.++        ++++.+... .......++.....+..-|+.     +.-+.++..+++..+.+.|++.|.+..+.+|
T Consensus       223 v~~~~--------~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T-----l~lR~~~~~~na~~lA~~L~~hp~v~~V~yP  289 (395)
T PRK05967        223 VSANE--------KCWPQLLEAHGTLGLCAGPDDTYQILRGLRT-----MGIRLEHHRKSALEIARWLEGRPDVARVLHP  289 (395)
T ss_pred             EEcCH--------HHHHHHHHHHHHcCCCCCHHHHHHHHcCccc-----HHHHHHHHHHHHHHHHHHHHhCCCCcEEECC
Confidence            65432        345555433 233456677776666666654     7778888889999999999988777545555


Q ss_pred             C
Q 014936          336 E  336 (415)
Q Consensus       336 ~  336 (415)
                      .
T Consensus       290 g  290 (395)
T PRK05967        290 A  290 (395)
T ss_pred             C
Confidence            3

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.91  E-value=3.7e-21  Score=182.43  Aligned_cols=332  Identities=13%  Similarity=0.071  Sum_probs=207.7

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHH----HHHHHHhhhCCCCCCCCcE-
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY------APTAGLPLTRR----AIAEYLSRDLPYKLTPNDV-  103 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~----~ia~~~~~~~~~~~~~~~i-  103 (415)
                      ++.+++-..+      ...+|.+++++...+......++      +..+...+|++    .++++++        .+.. 
T Consensus        28 ~~~~~l~~se------n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g--------~~~al   93 (416)
T PRK13034         28 QDHLELIASE------NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG--------CDYAN   93 (416)
T ss_pred             hcCeeecccc------cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC--------CCceE
Confidence            5667776665      34589999999888522111111      11234677777    7777772        3345 


Q ss_pred             EEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHHh--CCCeE--EEeeccCCCCCCCChhHHHhhcCC-CceEE
Q 014936          104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPI-YELSAAF--RHIEV--RHFDLLPDKGWEVDLDDIESLADQ-NTVAL  177 (415)
Q Consensus       104 ~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~-~~~~~~~--~g~~~--~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v  177 (415)
                      +.+++|+.|+..++.+++++||+|+++..+|.+ +...++.  .+...  ..+++++. .+.+|++++++.++. ++++|
T Consensus        94 v~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~klV  172 (416)
T PRK13034         94 VQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEHKPKLI  172 (416)
T ss_pred             EecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhcCCeEE
Confidence            556889999999999999999999999999987 3322221  12222  23444332 345899999988743 57777


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      ++.++.  +|..   .++.+|.++|+++|+++++|++|+.+.+....  ....+.  .-.++++|++|+++.+.  .|++
T Consensus       173 i~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~g~--~~~~~~--~~Di~~~s~~K~l~g~~--GG~v  241 (416)
T PRK13034        173 IAGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAAGE--HPNPFP--HAHVVTTTTHKTLRGPR--GGMI  241 (416)
T ss_pred             EECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCcccCC--CCCCCC--CceEEEEeCcccCCCCC--CeEE
Confidence            766654  3555   46778888899999999999999887654211  111111  12388899999974332  3777


Q ss_pred             EeeCCCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          258 VTTDPCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ++++       +.+...++.....+  ....+....++...+....+....+.++++.++.+++.+.|+++ |+.+. .+
T Consensus       242 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~-~~  312 (416)
T PRK13034        242 LTND-------EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLV-SG  312 (416)
T ss_pred             EECc-------HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEec-cC
Confidence            7654       23444454433221  22333333333323322111223456789999999999999988 77733 32


Q ss_pred             -CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC------CCCCCCeEEEEee------CChhhHHHHHHHHH
Q 014936          336 -EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT------AVGLKNWLRVTFA------VDPYSLEECLDRIK  402 (415)
Q Consensus       336 -~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------~~~~~~~iRi~~~------~~~~~l~~~l~~l~  402 (415)
                       ..+..+++.+....     .....+...|++.||.+.+-.      ....+..+|+++.      .++++++.+++.|.
T Consensus       313 ~~~t~i~~v~~~~~~-----~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~  387 (416)
T PRK13034        313 GTDNHLLLVDLRPKG-----LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWIL  387 (416)
T ss_pred             CCCCcEEEEEcCCCC-----CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence             34566666665321     133444455577899997521      1223568999972      46899999999999


Q ss_pred             HHHH
Q 014936          403 SFYQ  406 (415)
Q Consensus       403 ~~~~  406 (415)
                      +++.
T Consensus       388 ~~~~  391 (416)
T PRK13034        388 DVLD  391 (416)
T ss_pred             HHHh
Confidence            7776

>TIGR01814 kynureninase kynureninase

Probab=99.90  E-value=3.2e-21  Score=183.42  Aligned_cols=331  Identities=15%  Similarity=0.106  Sum_probs=208.7

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCC---cHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAG---LPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~~g---~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      +.++.|+.+...     +.++.+.+++.+.+...    ....+....+   ..+.++.+ +++      ++++++|++++
T Consensus        26 ~~~iyld~~a~g-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~------g~~~~~v~~~~   93 (406)
T TIGR01814        26 NAVIYLDGNSLG-----LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLV------GAKEDEVVVMN   93 (406)
T ss_pred             CCcEEecCCCcC-----cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-ccc------CCCCCcEEEeC
Confidence            567899877622     34788888887765421    1011110011   12222333 443      46789999999


Q ss_pred             ChHHHHHHHHHHhcCCC---CEEEEcCCCCcchHH----HHHhCCCeE----EEeeccCCCCCCCChhHHHhhc---CCC
Q 014936          108 GCTQAIDVAMALLSRPG---ANILLPRPGFPIYEL----SAAFRHIEV----RHFDLLPDKGWEVDLDDIESLA---DQN  173 (415)
Q Consensus       108 g~~~al~~~~~~l~~~g---d~vi~~~p~y~~~~~----~~~~~g~~~----~~~~~~~~~~~~~~~~~l~~~~---~~~  173 (415)
                      |+|++++.++.++.++|   +.|++....|++...    .++..|+++    ..++.  +.++.++++.+++.+   .++
T Consensus        94 ~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~  171 (406)
T TIGR01814        94 TLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDD  171 (406)
T ss_pred             CchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCC
Confidence            99999999999876554   368888899987332    345678876    34433  334457888888776   467


Q ss_pred             ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCc
Q 014936          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGW  252 (415)
Q Consensus       174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~  252 (415)
                      +++|++++++|.||.+.|   +++|+++|+++|+++++|++++..    ..+..+...+.+   +++.|.+|++. .+| 
T Consensus       172 t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G----~~~id~~~~gvD---~~~~s~hK~l~g~pG-  240 (406)
T TIGR01814       172 IAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVG----NVPLDLHDWGVD---FACWCTYKYLNAGPG-  240 (406)
T ss_pred             eEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccC----CcccccccCCCC---EEEEcCccccCCCCC-
Confidence            899999999999999965   788888899999999999999983    333334444443   88889999863 445 


Q ss_pred             eEEEEEeeCCCCCCChHHHHHH--------H--------HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          253 RLGWFVTTDPCGMFRKPKVVER--------M--------KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~--------~--------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                        |.++..++......|.+...        +        .......++++.....++.++|+...+..+++..++.+++.
T Consensus       241 --~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~  318 (406)
T TIGR01814       241 --AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLT  318 (406)
T ss_pred             --eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence              33333221100000000000        0        00001124556666666666665433344677888888888


Q ss_pred             HHHHHHhhcC----CCCcCCCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-
Q 014936          317 DICYNKIKEI----PCISCPHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-  387 (415)
Q Consensus       317 ~~l~~~l~~~----~~~~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-  387 (415)
                      +++.+.|+++    +++.++ .|.    .+..+.+.++.       +..++...| .++||.+...    ..+.||+|+ 
T Consensus       319 ~~l~~~l~~~~~~~~~~~i~-~~~~~~~r~~~v~~~~~~-------~~~~~~~~L-~~~gi~v~~~----~~~~iRiS~~  385 (406)
T TIGR01814       319 DYLEELIKARCGGPPVLTII-TPRDHAQRGCQLSLTHPV-------PGKAVFQAL-IKRGVIGDKR----EPSVIRVAPV  385 (406)
T ss_pred             HHHHHHHHhhcCCCCceEEe-CCCChhhcCCeEEEEecC-------CHHHHHHHH-HHCCEEEecc----CCCeEEEech
Confidence            9999888764    346533 332    13344555541       345666665 5679987532    246899998 


Q ss_pred             e--CChhhHHHHHHHHHHHH
Q 014936          388 A--VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       388 ~--~~~~~l~~~l~~l~~~~  405 (415)
                      .  ++++|++.+++.|++++
T Consensus       386 ~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       386 PLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             hccCCHHHHHHHHHHHHHHh
Confidence            3  48899999999998764

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.90  E-value=7.6e-21  Score=179.92  Aligned_cols=227  Identities=14%  Similarity=0.091  Sum_probs=164.0

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~  152 (415)
                      +...++++.+|++.+        .+..++++++++|+.+++.++.++||+|+++...|.+....+    ...|+++..++
T Consensus        64 p~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd  135 (433)
T PRK08134         64 PTVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVK  135 (433)
T ss_pred             hHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence            346889999999872        345789999999999999999999999999999998754443    45799998887


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      .+       |+++++++++++|++|++.+|+||+|.+.   ++++|+++|+++|+++|+|.+++....    ..++ .++
T Consensus       136 ~~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~---Di~~I~~la~~~gi~livD~t~a~~~~----~~pl-~~G  200 (433)
T PRK08134        136 PG-------DIDGWRAAIRPNTRLLFGETLGNPGLEVL---DIPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-EHG  200 (433)
T ss_pred             CC-------CHHHHHHhcCCCCeEEEEECCCcccCccc---CHHHHHHHHHHcCCEEEEECCCccccc----CCch-hcC
Confidence            52       78999999999999999999999999995   478888889999999999999875332    2222 334


Q ss_pred             CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH-------------------------HHHHHHH--hhccccCCc
Q 014936          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP-------------------------KVVERMK--KYFDILGDP  285 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------------------------~~~~~~~--~~~~~~~~~  285 (415)
                      .+   +++.|.+|.++.+|..+|++++......+.+.                         .+....+  .........
T Consensus       201 aD---~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~l  277 (433)
T PRK08134        201 AD---LVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACL  277 (433)
T ss_pred             CC---EEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCC
Confidence            43   88889999988888888887763211110000                         0001111  112223345


Q ss_pred             hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      ++.....+..-|+.     +..+.++..++...+.+.|+..|.+..+.+
T Consensus       278 s~~~A~l~~~gL~t-----l~~R~~~~~~nA~~la~~L~~~p~V~~V~y  321 (433)
T PRK08134        278 SPMNAWQLLQGIET-----LPLRMERHVANTRKVVAFLASHPAVARVAH  321 (433)
T ss_pred             CHHHHHHHhcCCCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEEC
Confidence            55555555555554     778888888899999999988776543333

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.90  E-value=6.4e-21  Score=178.29  Aligned_cols=221  Identities=15%  Similarity=0.136  Sum_probs=153.7

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g  145 (415)
                      +.+|+++ ....|++.+|++.+        .+..+++++|+.++.+++ .++++||+|++++|.|++...    .+...|
T Consensus        44 y~r~~~p-~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~g  113 (380)
T PRK06176         44 YSRSGNP-TRFALEELIADLEG--------GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNG  113 (380)
T ss_pred             ccCCCCh-hHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcC
Confidence            3455553 46889999999872        334566677778998766 466899999999999986543    445678


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      +++..++.       .|++++++++++++++|++.+|+||+|.+.+   +++|+++|+++|+++|+|++|+...+. .  
T Consensus       114 i~v~~vd~-------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~--  180 (380)
T PRK06176        114 LSCTIIDT-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N--  180 (380)
T ss_pred             eEEEEcCC-------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C--
Confidence            88777653       3799999999989999999999999999954   778888899999999999999864322 1  


Q ss_pred             ccccccCCCCCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhhccc-cCCchhHHHHHHHHhhCCCcHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                       ++ .++.+   +++.|++|.++.+|- -.|++++++       +++.++++..... ....++.....+...++.    
T Consensus       181 -p~-~~gaD---ivv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~t----  244 (380)
T PRK06176        181 -PL-LLGAD---IVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQNAIGGVLGPQDSWLLQRGIKT----  244 (380)
T ss_pred             -cc-ccCCC---EEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHHHhcCCCCHHHHHHHHhccCc----
Confidence             22 22333   888999999877664 345555533       2465666554332 223344444444434432    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCIS  330 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~  330 (415)
                       +..+.++..++...+.+.|++.|.+.
T Consensus       245 -l~~R~~~~~~~a~~la~~L~~~p~v~  270 (380)
T PRK06176        245 -LGLRMEAHQKNALCVAEFLEKHPKVE  270 (380)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCee
Confidence             45566666677777888888766554

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.90  E-value=4.2e-21  Score=183.62  Aligned_cols=352  Identities=18%  Similarity=0.115  Sum_probs=215.9

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+|+.++|+..|......+ -.+|.+.+++.+++........  .......+|.+.+++++      +-..+.++++++|
T Consensus        40 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~------~~~~~~v~f~~SG  112 (433)
T PRK08117         40 VDGKEYLDFTSGIAVANVG-HRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEIT------PGGLDCFFFSNSG  112 (433)
T ss_pred             CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC------CCCCCEEEEeCcH
Confidence            3478899998875322211 2578999999999875322111  11122344555555543      1134689999999


Q ss_pred             HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccCCC--CCC--------CCh
Q 014936          110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPDK--GWE--------VDL  163 (415)
Q Consensus       110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~~--~~~--------~~~  163 (415)
                      ++|++.+++...  ....+|+....+|++....+.....              .+..+|.....  .+.        .++
T Consensus       113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (433)
T PRK08117        113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL  192 (433)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence            999999998743  1125788888888876554322110              11122211000  000        144


Q ss_pred             hHHHhhcC----CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCe
Q 014936          164 DDIESLAD----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI  237 (415)
Q Consensus       164 ~~l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  237 (415)
                      +.+++.++    ....+.+++.| ....|.+ .+.+.++++.++|++||+++|+||+|.++...|..... ..++..   
T Consensus       193 ~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv~---  268 (433)
T PRK08117        193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGVV---  268 (433)
T ss_pred             HHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhH-hhcCCC---
Confidence            55666553    23456677777 5556765 57888999999999999999999999987666543221 222222   


Q ss_pred             EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                      ..+.++||.++ +|+++|++++++        ++.+.+... ...+.+.+++++.++.+.|+...+   +...++++++.
T Consensus       269 pDi~t~sK~lg-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g  336 (433)
T PRK08117        269 PDIMTIAKGIA-SGLPLSAVVASK--------ELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE---EKLLDNANEMG  336 (433)
T ss_pred             CCEeehhhhcc-CCCcceeEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHH
Confidence            22458999976 789999999865        576666443 223456789999999888875321   23444555555


Q ss_pred             HHHHHHhhc----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCC
Q 014936          317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVD  390 (415)
Q Consensus       317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~  390 (415)
                      +++.+.|++    ++.+.  ..+..|.++.+.+..............+...+.++||.+.+...  ..+.+|+++  .++
T Consensus       337 ~~l~~~L~~l~~~~~~~~--~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t  412 (433)
T PRK08117        337 AYALERLEVLKEKHPVIG--DVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVT  412 (433)
T ss_pred             HHHHHHHHHHHhcCCcee--eeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCC
Confidence            555555554    32221  24556777777774321000001223334445678999876321  247899996  579


Q ss_pred             hhhHHHHHHHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       391 ~~~l~~~l~~l~~~~~~~~~  410 (415)
                      ++++++++++|.++++++.+
T Consensus       413 ~~~i~~~~~~l~~~l~~~~~  432 (433)
T PRK08117        413 KEEIDEGLDILDEALTEYEA  432 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999887643

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.90  E-value=8.3e-21  Score=179.42  Aligned_cols=229  Identities=15%  Similarity=0.094  Sum_probs=165.0

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~  152 (415)
                      +....|++.+|++.        ..+..+++++|++|+.+++.+++++||+|+++...|.+....    +...|+++..++
T Consensus        69 p~~~~Le~~lA~l~--------g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd  140 (436)
T PRK07812         69 PTQDVVEQRIAALE--------GGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE  140 (436)
T ss_pred             chHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC
Confidence            34678889999887        345678888999999999999999999999999999876543    344677777664


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                       ++     .|++.+++++++++++|++.+|+||+|.+.   ++++|+++|+++|+++|+|++++....    ..++ .++
T Consensus       141 -d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~---Dl~~I~~la~~~gi~liVD~t~a~~~~----~~pl-~~G  206 (436)
T PRK07812        141 -DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVL---DIPGVAEVAHEAGVPLIVDNTIATPYL----IRPL-EHG  206 (436)
T ss_pred             -CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCccccc----CCch-hcC
Confidence             21     389999999999999999999999999995   578888888899999999999875221    1222 233


Q ss_pred             CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC-----------------------hHHHHHHHH--hhccccCCchh
Q 014936          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-----------------------KPKVVERMK--KYFDILGDPAT  287 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-----------------------~~~~~~~~~--~~~~~~~~~~~  287 (415)
                      .+   +++.|++|.++..|--+|++++.+....+.                       ++.+..+.+  .........++
T Consensus       207 aD---ivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p  283 (436)
T PRK07812        207 AD---IVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISP  283 (436)
T ss_pred             CC---EEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence            33   777999999988887788877743211100                       001111111  11233455666


Q ss_pred             HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          288 FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      .....+..-|+.     +..+.++..++...+.+.|++.|.+..+.+|
T Consensus       284 ~~a~l~~rgl~t-----L~~R~~~~~~nA~~la~~L~~~p~v~~V~yP  326 (436)
T PRK07812        284 FNAFLIAQGLET-----LSLRIERHVANAQRVAEFLEARDEVASVNYA  326 (436)
T ss_pred             HHHHHHhcCcCc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            666666666655     7788889999999999999998876545455

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.90  E-value=1.1e-20  Score=179.20  Aligned_cols=227  Identities=16%  Similarity=0.131  Sum_probs=165.1

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~  153 (415)
                      ...+|++.+|++.        ..+..+++++|++|+.+++.+++++||+|+++.++|.+...    .+...|+++..++.
T Consensus        64 ~~~~le~~lA~l~--------g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~  135 (427)
T PRK05994         64 TNAVLEERVAALE--------GGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA  135 (427)
T ss_pred             cHHHHHHHHHHHh--------CCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence            4578899999987        34468899999999999999999999999999999986443    35678999888764


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                             .|++.+++++++++++|++++|+||+|.+++   +++|+++|+++|+++|+|++++...    ...++ .++.
T Consensus       136 -------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~~pl-~~ga  200 (427)
T PRK05994        136 -------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LIRPI-EHGA  200 (427)
T ss_pred             -------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cCCcc-ccCC
Confidence                   2789999999889999999999999999965   7788888999999999999997532    11222 2333


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCC-Ch----------HH-----HH-----------HHHHhhccccCCch
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF-RK----------PK-----VV-----------ERMKKYFDILGDPA  286 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-~~----------~~-----~~-----------~~~~~~~~~~~~~~  286 (415)
                      +   +++.|++|.++.+|-.+|++++......+ ..          +.     +.           ...+.........+
T Consensus       201 D---ivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  277 (427)
T PRK05994        201 D---IVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS  277 (427)
T ss_pred             c---EEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence            3   88899999988878777877663211100 00          00     11           11111222334456


Q ss_pred             hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          287 TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       287 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +.....+..-|+.     +..+.++.+++...+.+.|+..|.+..+.+|
T Consensus       278 ~~~A~l~~~~l~t-----L~~r~~~~~~~a~~la~~L~~~p~v~~v~yP  321 (427)
T PRK05994        278 PFNAFLILTGIET-----LPLRMQRHSDNALAVAEWLKGHPKVSWVNYA  321 (427)
T ss_pred             HHHHHHHHcCccc-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            6655655555654     7788888899999999999988776544444

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.90  E-value=9.3e-21  Score=179.67  Aligned_cols=350  Identities=17%  Similarity=0.117  Sum_probs=213.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~  111 (415)
                      +|+.++|+..|...... --.+|.+.+++++++....+..  ......+.+..+++.+.+..+  -. .+.++++++|++
T Consensus        38 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~~~--~~~~~~~~~~~la~~l~~~~p--~~~~~~v~f~~SGse  112 (425)
T PRK07495         38 EGRRYIDFAAGIAVVNT-GHRHPRVIAAVKAQLDRFTHTC--HQVVPYENYVRLAERLNALVP--GDFAKKTIFVTTGAE  112 (425)
T ss_pred             CCCEEEEccccHHhhcc-CCCCHHHHHHHHHHHhhccCcc--cCccCCHHHHHHHHHHHHhCC--CCCCCEEEECCchHH
Confidence            48889999887532211 1247889999999987532211  101112334444555543222  11 268999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCCCCC----hhHHHhhcC
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEVD----LDDIESLAD  171 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~~----~~~l~~~~~  171 (415)
                      |++.+++...  ....+|+....+|++....+... |.             .+..++.+. ...+.+    ++.+++.+.
T Consensus       113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~  191 (425)
T PRK07495        113 AVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPV-ELHGVSVEQSLAALDKLFK  191 (425)
T ss_pred             HHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCc-ccccccHHHHHHHHHHHHH
Confidence            9999998754  12357898999998865443221 10             122233211 111122    444566553


Q ss_pred             ----CCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          172 ----QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       172 ----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                          ....+.++..| +..+|. .+|.+.+++|.++|++||+++|+||++.++...|.. .....+   +.+..+.++||
T Consensus       192 ~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~~---gv~pDi~tlsK  267 (425)
T PRK07495        192 ADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEHH---EVAADLTTMAK  267 (425)
T ss_pred             hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeeccc---CCCCCEEeehh
Confidence                23455667777 333774 579999999999999999999999999987665542 112222   22345678999


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      .+ .+|+++|++++++        ++.+.+... ...+++.+++++.++.+.|+...+.   +..++++++.+++.+.|+
T Consensus       268 ~l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~  335 (425)
T PRK07495        268 GL-AGGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLA  335 (425)
T ss_pred             hh-cCCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHH
Confidence            96 4789999999965        566665443 2345678899999777776542211   233444444444444444


Q ss_pred             c----CCCCcCCCCCCCceEEEEecCccccCCCCCH--HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHH
Q 014936          325 E----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDD--IDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEE  396 (415)
Q Consensus       325 ~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~--~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~  396 (415)
                      +    +|.+..  ....|+++|+.+...... ..+.  ...+...+.++|+.+.+....  .+.+||..  ..+++++++
T Consensus       336 ~l~~~~~~i~~--vrG~Gl~~~iel~~~~~~-~~~~~~~~~~~~~~~~~Gvl~~~~g~~--~~~~r~~Ppl~it~~~id~  410 (425)
T PRK07495        336 SLRETVPEIAD--IRGPGFMNAVEFNDADSG-LPSAEFANRVRLKALEKGLILLTCGVH--GNVIRFLAPITIQDDVFAE  410 (425)
T ss_pred             HHHhhCCCeee--eecCceEEEEEEecCCCC-CccHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEeCCCccCHHHHHH
Confidence            3    443331  234489999988532110 0111  222333445679998763221  37899998  478999999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRHA  409 (415)
Q Consensus       397 ~l~~l~~~~~~~~  409 (415)
                      ++++|.++++++.
T Consensus       411 ~~~~l~~~l~~~~  423 (425)
T PRK07495        411 ALDILEASILEAS  423 (425)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998754

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.90  E-value=2e-20  Score=178.90  Aligned_cols=350  Identities=16%  Similarity=0.109  Sum_probs=215.9

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +|+.++|+..|.-.... --.+|.+.+++++++....+..+  .....+.+..+|+.+.+..+. ...+.++++++|++|
T Consensus        54 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA  129 (443)
T PRK06058         54 DGNRLIDLGSGIAVTSV-GNSAPRVVEAVREQVARFTHTCF--MVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAEA  129 (443)
T ss_pred             CCCEEEEcCcchhhhcc-CCCCHHHHHHHHHHHHhccCccc--cccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHH
Confidence            47788888777422111 12478999999999875322122  112245566666666543321 112589999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeecc-CCCC---CCC--------Chh
Q 014936          113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLL-PDKG---WEV--------DLD  164 (415)
Q Consensus       113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~-~~~~---~~~--------~~~  164 (415)
                      ++.+++...  ...++|+....+|++....+.....              .+..++.. +.++   ...        .++
T Consensus       130 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (443)
T PRK06058        130 VENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAIT  209 (443)
T ss_pred             HHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHH
Confidence            999998542  1237899999999988766543211              11112211 0000   000        123


Q ss_pred             HHHhhcCCCceEEEecCCCCcc-ccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936          165 DIESLADQNTVALVIINPGNPC-GNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (415)
Q Consensus       165 ~l~~~~~~~~~~v~i~~p~npt-G~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  242 (415)
                      .+++.+.....+.++..|.+.. |.. .+.+.+++|.++|++||+++|.||++.++...|.... ...++..++++   +
T Consensus       210 ~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa-~~~~gv~PDiv---~  285 (443)
T PRK06058        210 VIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFA-CEHEGIVPDLI---T  285 (443)
T ss_pred             HHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhH-HHhcCCCCCEE---E
Confidence            3444444344566778885544 544 5688999999999999999999999998766654321 12233332333   4


Q ss_pred             CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN  321 (415)
Q Consensus       243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  321 (415)
                      ++|.++ +|+++|++++++        ++.+.+... ...+++.+++++.++.+.|+...+   ++..++++++.+++.+
T Consensus       286 ~gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~  353 (443)
T PRK06058        286 TAKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAALAAIETIEE---DDLVARARQIEALMTD  353 (443)
T ss_pred             Eccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHH
Confidence            589976 789999999865        677766544 334677899999999999865322   2345566666666666


Q ss_pred             HhhcC----CCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhh
Q 014936          322 KIKEI----PCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYS  393 (415)
Q Consensus       322 ~l~~~----~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~  393 (415)
                      .|+++    +.+. . ....|.++.+.+.....  ++......+...+ .++||.+.++..++  +++|+.+  ..++++
T Consensus       354 ~L~~l~~~~~~i~-~-vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~~~~~~~~~--~~lr~~Ppl~~t~~~  428 (443)
T PRK06058        354 RLRALAAEDDRIG-D-VRGRGAMIAIELVKPGTTEPDAELTKALAAAA-HAAGVIVLTCGTYG--NVIRLLPPLVIGDEL  428 (443)
T ss_pred             HHHHHHhhCCcEE-e-eeccceEEEEEEecCCCCCCcHHHHHHHHHHH-HHCCeEEeccCCCC--CEEEEECCCccCHHH
Confidence            66653    2222 1 23445566555532110  0000122333443 56799998865443  6899976  579999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQR  407 (415)
Q Consensus       394 l~~~l~~l~~~~~~  407 (415)
                      +++++++|.+++++
T Consensus       429 i~~~~~~l~~~l~~  442 (443)
T PRK06058        429 LREGLDVLEAALAD  442 (443)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998864

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=2.9e-20  Score=168.83  Aligned_cols=311  Identities=20%  Similarity=0.209  Sum_probs=216.0

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcC
Q 014936           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPR  131 (415)
Q Consensus        53 ~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~  131 (415)
                      .....++++.+.++++.+.. ++  -..++++++++|+        .....+.++++|.|+.++++++. ++||+||+++
T Consensus        13 i~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps   81 (374)
T COG0399          13 IGEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPS   81 (374)
T ss_pred             cchHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence            34778888999998877644 54  3589999999998        67899999999999999999764 8999999999


Q ss_pred             CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936          132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA  211 (415)
Q Consensus       132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  211 (415)
                      .+|....+.....|++++.+++++ +.+.+|++.+|+++++++|+|+.+|-   .|..   .++.+|.++|++||++||+
T Consensus        82 ~TfvATan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tKAIipVhl---~G~~---~dm~~i~~la~~~~l~vIE  154 (374)
T COG0399          82 FTFVATANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTKAIIPVHL---AGQP---CDMDAIMALAKRHGLPVIE  154 (374)
T ss_pred             CchHHHHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCeEEEEehh---ccCC---CCHHHHHHHHHHcCCeEEE
Confidence            999999999999999999999987 45789999999999999999998875   3555   4788888999999999999


Q ss_pred             ccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCC----
Q 014936          212 DEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGD----  284 (415)
Q Consensus       212 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  284 (415)
                      |.+++.+. +.|+...   +++.    +.++||.  |.+...  -.|.+++++       ++++++++....+...    
T Consensus       155 DaAqa~Ga~y~gk~vG---t~Gd----~~~fSF~~~K~ittg--EGGav~tnd-------~ela~k~~~lr~hG~~~~~~  218 (374)
T COG0399         155 DAAQAHGATYKGKKVG---SFGD----IGAFSFHATKNLTTG--EGGAVVTND-------EELAEKARSLRNHGLSRDAV  218 (374)
T ss_pred             EcchhccCeecCcccc---cccc----eEEEEecCCCCcccc--CceEEEeCC-------HHHHHHHHHHHHhCcCCCcc
Confidence            99999876 5555333   3333    4455554  775443  347777755       4677777665432211    


Q ss_pred             -------------chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc---e-EEEEecCc
Q 014936          285 -------------PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS---M-AVMLKLNL  347 (415)
Q Consensus       285 -------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g---~-~~~~~l~~  347 (415)
                                   .+.+..+....-|     +.+++..++-++..+...+.|++++++.....+.+.   + .+.+.++.
T Consensus       219 ~~y~~~~~G~N~rm~~iqAAigl~QL-----~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~  293 (374)
T COG0399         219 FKYLHEELGYNYRLTEIQAAIGLAQL-----ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE  293 (374)
T ss_pred             ccceeeecccccCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC
Confidence                         1111122222222     446777777778888888888887665533233332   2 22233432


Q ss_pred             cccCCCCCHHHHHHHHHhhcCe----EEEcCCCC--------C---C--------CCeEEEEe--eCChhhHHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESV----IILPGTAV--------G---L--------KNWLRVTF--AVDPYSLEECLDRIK  402 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi----~v~~g~~~--------~---~--------~~~iRi~~--~~~~~~l~~~l~~l~  402 (415)
                      .    . ...+.+...|++.||    ...|-..+        .   .        ...+.+-+  ..+++++++.++.|.
T Consensus       294 ~----~-~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~  368 (374)
T COG0399         294 E----G-ISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALK  368 (374)
T ss_pred             C----C-CCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHH
Confidence            1    0 223344455577754    44442211        0   0        24566666  478999999999999


Q ss_pred             HHHHH
Q 014936          403 SFYQR  407 (415)
Q Consensus       403 ~~~~~  407 (415)
                      +++.+
T Consensus       369 ~~~~~  373 (374)
T COG0399         369 EVLGS  373 (374)
T ss_pred             HHhcc
Confidence            88753

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.90  E-value=2.6e-20  Score=175.71  Aligned_cols=308  Identities=19%  Similarity=0.179  Sum_probs=205.0

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCC
Q 014936           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP  132 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p  132 (415)
                      .+.-++++.+.+..+.+ .++  ....++|++++++++        .++.++++|+++|+.+++.++ .++||+|+++.+
T Consensus         9 ~~~~~~~v~~~~~~~~~-~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~   77 (380)
T TIGR03588         9 DQDDIDAVVEVLKSDFL-TQG--PTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPI   77 (380)
T ss_pred             CHHHHHHHHHHHhcCCc-cCC--hhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCc
Confidence            35557778887775432 233  356899999999983        245667778999999999998 789999999999


Q ss_pred             CCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936          133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL  208 (415)
Q Consensus       133 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~  208 (415)
                      +|..+...+...|++++.++++++ ++.+|++++++.++    +++++|++++   ++|..   .++++|.++|+++|++
T Consensus        78 ~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~---~~~~~i~~l~~~~~~~  150 (380)
T TIGR03588        78 TFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKS---VDMQAIAALAKKHGLK  150 (380)
T ss_pred             chHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEEeC---CCCcc---CCHHHHHHHHHHcCCE
Confidence            999999999999999999998653 46789999999998    6788887655   57877   4578888999999999


Q ss_pred             EEEccccCCcc-cCCCCcccccc--cCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccC
Q 014936          209 VIADEVYGHLV-FGDKPFVPMGV--FGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG  283 (415)
Q Consensus       209 li~De~~~~~~-~~~~~~~~~~~--~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (415)
                      +|+|++|+.+. +.+.   ++..  ++    .+.+.|++  |.++.+  ..|++++.+       +++.++++.......
T Consensus       151 lI~D~a~a~g~~~~~~---~~g~~~~~----d~~~~S~~~~K~~~~~--~GG~v~~~~-------~~~~~~~~~~~~~g~  214 (380)
T TIGR03588       151 IIEDASHALGAEYGGK---PVGNCRYA----DATVFSFHPVKIITTA--EGGAVTTND-------EELAERMRLLRSHGI  214 (380)
T ss_pred             EEEECCCcccCccCCE---eCCCcccc----ceEEEecCCCCccccc--CceEEEECC-------HHHHHHHHHHHHCCC
Confidence            99999998754 3332   2222  22    26666776  876443  357777654       246665554321110


Q ss_pred             --------------------------CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          284 --------------------------DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       284 --------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                                                ..+.+........|     ..+++..++.+++.+++.+.|..+|++.....+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~  289 (380)
T TIGR03588       215 TKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLG  289 (380)
T ss_pred             CCCcccccccccCcceeeeeccccccCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCC
Confidence                                      01111111122223     23677778888888999999998876663312211


Q ss_pred             ---ce-EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC-----------CC----------CCeEEEEee--CC
Q 014936          338 ---SM-AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV-----------GL----------KNWLRVTFA--VD  390 (415)
Q Consensus       338 ---g~-~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-----------~~----------~~~iRi~~~--~~  390 (415)
                         .+ ...+.++..  .+ .+..++...| +++||.+.....+           ..          ...+++.+.  .+
T Consensus       290 ~~~~~~~~~i~~~~~--~~-~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~  365 (380)
T TIGR03588       290 SKSAWHLYPILLDQE--FG-CTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALT  365 (380)
T ss_pred             CEeEEEEEEEEECCc--CC-CCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCC
Confidence               12 222334321  01 1345555554 7789988643211           00          245777773  68


Q ss_pred             hhhHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSF  404 (415)
Q Consensus       391 ~~~l~~~l~~l~~~  404 (415)
                      +++++..++.|+++
T Consensus       366 ~~dv~~i~~~l~~~  379 (380)
T TIGR03588       366 LEQQQRVVETLRKV  379 (380)
T ss_pred             HHHHHHHHHHHHHh
Confidence            89999999988875

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.89  E-value=3.2e-20  Score=171.59  Aligned_cols=350  Identities=18%  Similarity=0.133  Sum_probs=223.3

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+|+.++||..|...... --.+|.+.+|+++++..-.+  ..|..+    +....+|+.+.+..... ..+.++++++|
T Consensus        53 vdG~~ylDf~sgi~v~~~-GH~hP~Vv~Av~~q~~~~~h~~~~~~~~----e~~v~~ae~L~~~~p~~-~~~~~~f~~sG  126 (447)
T COG0160          53 VDGNEYLDFLSGIAVLNL-GHNHPRVVEAVKRQLAKLNHTHTRDLYY----EPYVELAEKLTALAPGS-GLKKVFFGNSG  126 (447)
T ss_pred             CCCCEEEEcccCcchhcc-CCCCHHHHHHHHHHHHHhhcccCCcccc----hhHHHHHHHHHHhCCcc-cCCeEEecCCc
Confidence            458899999997544322 12589999999998875432  233332    34444444444322211 45689999999


Q ss_pred             HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-C-------------CeEEEeeccC--CCCCCC--------Ch
Q 014936          110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-H-------------IEVRHFDLLP--DKGWEV--------DL  163 (415)
Q Consensus       110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~--~~~~~~--------~~  163 (415)
                      ++|++.+++...  .....||.....|++....+... |             ..+..+|...  .+.+..        ..
T Consensus       127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~  206 (447)
T COG0160         127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL  206 (447)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence            999999999864  23367888888888755443221 1             1234444321  111111        23


Q ss_pred             hHHHhhcC-----CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC
Q 014936          164 DDIESLAD-----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (415)
Q Consensus       164 ~~l~~~~~-----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  236 (415)
                      +.++..+.     +...+.++..| +...|.+ .|.+.++++.++|++||+++|+||++.++..+| ....+..++..+.
T Consensus       207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PD  285 (447)
T COG0160         207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPD  285 (447)
T ss_pred             HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-cchhhhhcCCCCC
Confidence            33444331     23456677777 6777765 788889999999999999999999999998887 3334444443333


Q ss_pred             eEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       237 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                      +|   +++|.++. |+++|.++.+.        ++.+........++..|+++.+++.+.|+...++   .+.++..+.-
T Consensus       286 iv---t~aK~ig~-G~Pl~avv~r~--------ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G  350 (447)
T COG0160         286 IV---TLAKSLGG-GLPLSAVVGRA--------EIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEE---NLLERAAELG  350 (447)
T ss_pred             EE---EecccccC-CCceeEEeccH--------HhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHH
Confidence            44   67899655 99999999865        5666222223446788999999999999753322   4445555555


Q ss_pred             HHHHHHhhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936          317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--  387 (415)
Q Consensus       317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--  387 (415)
                      +++.+.|.+    .|.+. . ...-|+++-+++....-   ++......++.+ +.+.|+.+..+..+  .+.|||..  
T Consensus       351 ~~l~~~L~~l~~~~~~Ig-d-VRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~-~~~~Glil~~~G~~--~nviRi~PPL  425 (447)
T COG0160         351 EYLRDRLEELQEKHPLIG-D-VRGLGLMIGVELVKDRDTKEPDAELAAKIVAR-AFERGLLLLTCGPH--GNVLRILPPL  425 (447)
T ss_pred             HHHHHHHHHHHhhcCcee-c-ccccceEEEEEEecCCCCCCCCHHHHHHHHHH-HHHcCCEEeccCCC--CcEEEEeCCc
Confidence            555555543    44333 2 34557888777754211   111112344444 46679988765433  37899998  


Q ss_pred             eCChhhHHHHHHHHHHHHHHH
Q 014936          388 AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       388 ~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ..++++++.++++|.+++++.
T Consensus       426 ~is~e~~d~~l~il~~al~~~  446 (447)
T COG0160         426 TISDEELDEGLDILEEALKEA  446 (447)
T ss_pred             ccCHHHHHHHHHHHHHHHHhh
Confidence            568999999999999998763

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.89  E-value=2.7e-20  Score=177.16  Aligned_cols=353  Identities=18%  Similarity=0.133  Sum_probs=212.5

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEE-eCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFV-TSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i-~~g~  109 (415)
                      .+|+.++||..|.-.... --.+|.+.+++++++....+ .... ....+.+..+++.+.+....+-..+ .+++ +++|
T Consensus        36 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~-~~~~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG  112 (425)
T PRK09264         36 EDGKEYIDFFAGAGALNY-GHNNPVLKQALIDYLQRDGI-THGL-DMHTTAKREFLETFEETILKPRGLDYKVQFTGPTG  112 (425)
T ss_pred             CCCCEeeecccchhhccC-CCCCHHHHHHHHHHHHhccc-cccc-ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCH
Confidence            358889999888533221 12578999999998874211 1111 1112444555555543211111122 5655 5899


Q ss_pred             HHHHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhC-C---------C---eEEEeeccCCCC-CCCChhHHHhhcCC-
Q 014936          110 TQAIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFR-H---------I---EVRHFDLLPDKG-WEVDLDDIESLADQ-  172 (415)
Q Consensus       110 ~~al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~-g---------~---~~~~~~~~~~~~-~~~~~~~l~~~~~~-  172 (415)
                      ++|++.+++.... .| .+|+....+|++....+... +         .   .+..+|.+.... ..-|++.+++.+.+ 
T Consensus       113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~  192 (425)
T PRK09264        113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDS  192 (425)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhc
Confidence            9999999988641 22 57888899998876544322 1         0   122233211000 00256777877742 


Q ss_pred             ----CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccc
Q 014936          173 ----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR  246 (415)
Q Consensus       173 ----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  246 (415)
                          ...+.+++.| ....|. +++.+.+++|.++|++||+++|+||++.++...|... ....++..+.+   .+++|.
T Consensus       193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi---~t~~K~  268 (425)
T PRK09264        193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDI---VTLSKS  268 (425)
T ss_pred             cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCE---EEeccc
Confidence                2345667777 555676 5789999999999999999999999999876555322 12222222223   367899


Q ss_pred             cCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936          247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       247 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                      ++..|+++|++++++        ++ ..+... ...++..++++..++.+.++...  .-.+..++++++.+++.+.|++
T Consensus       269 l~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~--~~~~l~~~~~~~g~~l~~~l~~  337 (425)
T PRK09264        269 ISGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEEYW--SDDAFEKEVKAKGELVRERLEE  337 (425)
T ss_pred             cCCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHH
Confidence            776699999999975        33 223221 22345567777777666663210  0113445555555555555543


Q ss_pred             ----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHH
Q 014936          326 ----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLD  399 (415)
Q Consensus       326 ----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~  399 (415)
                          .|.+. ...+..|+++++.++..     .....+... +.++||.+.+...+  ...||+++.  .++++++++++
T Consensus       338 l~~~~~~~~-~~vrg~Gl~~~i~l~~~-----~~~~~l~~~-~~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~  408 (425)
T PRK09264        338 IAAKYPGLG-AEVRGRGMMQGIDFGDG-----ELAGKIAAE-AFENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLD  408 (425)
T ss_pred             HHHhCCCce-ecceecccEEEEEecCh-----HHHHHHHHH-HHHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHH
Confidence                33321 22355688889888531     123345544 45679999875432  367888875  78999999999


Q ss_pred             HHHHHHHHHHHH
Q 014936          400 RIKSFYQRHAKQ  411 (415)
Q Consensus       400 ~l~~~~~~~~~~  411 (415)
                      +|.+++++..++
T Consensus       409 ~l~~~l~~~~~~  420 (425)
T PRK09264        409 ILEEAVAEVLAE  420 (425)
T ss_pred             HHHHHHHHHHhc
Confidence            999999876543

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.89  E-value=8.9e-21  Score=180.79  Aligned_cols=348  Identities=16%  Similarity=0.119  Sum_probs=213.0

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++||..|.-....+ -.+|++.+++++++.......+..  -..+.+..+|+.+.+..+  -..+.++++++|++
T Consensus        39 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse  113 (423)
T PRK05964         39 ADGRELIDAISSWWVATHG-HNHPYIDQAIREQLDRLDHVIFAG--FTHEPAERLAQRLVALTP--GGLDHVFFSDSGSV  113 (423)
T ss_pred             CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHhhCCCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence            3588999998875322111 247999999999987533211110  012344555555544322  12468999999999


Q ss_pred             HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCCCCCCChhHHHhhc
Q 014936          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIESLA  170 (415)
Q Consensus       112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~~  170 (415)
                      |++.+++....       +| .+|+....+|++....+......             +..++....+....+++.+++.+
T Consensus       114 A~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l  193 (423)
T PRK05964        114 AVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALL  193 (423)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHH
Confidence            99999987631       23 57999999998866544332111             11222211000011277777777


Q ss_pred             CC--CceEEEecCC--CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          171 DQ--NTVALVIINP--GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       171 ~~--~~~~v~i~~p--~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                      .+  ...+.++..|  ++..|... +.+.+++|.++|++||+++|+||++.++...|... ....++....   +.+++|
T Consensus       194 ~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD---i~~~~K  269 (423)
T PRK05964        194 EKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD---IMCLSK  269 (423)
T ss_pred             HhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC---eeeeeh
Confidence            42  3344566676  56677764 89999999999999999999999998776555321 1122222222   336789


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  318 (415)
                      +++.+++++|++++++        ++.+.+...       ...+++.++++..++.+.|+...+   ++..++++++.++
T Consensus       270 ~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~  338 (423)
T PRK05964        270 GLTGGYLPLAATLCTA--------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED---EPVLERVAALSAG  338 (423)
T ss_pred             hhhcCcccceEEEEcH--------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHH
Confidence            9765558999988865        677766421       112345788888888888764211   2344555555555


Q ss_pred             HHHHhhcCCCCcCCC-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHH
Q 014936          319 CYNKIKEIPCISCPH-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLE  395 (415)
Q Consensus       319 l~~~l~~~~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~  395 (415)
                      +.+.|+++.....+. ....|.++.+.+..... + .....+...+ .++||.+.+..     +.+|+++.  +++++++
T Consensus       339 l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~~-----~~lR~~p~l~~t~edId  410 (423)
T PRK05964        339 LAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL-E-RDGPALRAFA-LERGVLLRPLG-----NTIYLMPPYIITAEELD  410 (423)
T ss_pred             HHHHHHhhccCCCeEEeecccEEEEEEeccCcc-h-hHHHHHHHHH-HHCCeEEEecC-----CEEEEeCCcccCHHHHH
Confidence            666555442222111 23446666666643110 0 0133454544 56799998742     57999985  7999999


Q ss_pred             HHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQR  407 (415)
Q Consensus       396 ~~l~~l~~~~~~  407 (415)
                      .++++|++++++
T Consensus       411 ~~v~~l~~al~~  422 (423)
T PRK05964        411 RITDAIVEVADE  422 (423)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999865

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.89  E-value=5.2e-20  Score=174.39  Aligned_cols=346  Identities=15%  Similarity=0.084  Sum_probs=206.6

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCC-CCCcEEE-eCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV-TSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i-~~g~  109 (415)
                      .+|+.++||..|.-.... --.+|.+.+++++++..... .... ....+.+..+++.+.+....+- ..+.+++ +++|
T Consensus        32 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~-~~~~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG  108 (412)
T TIGR02407        32 EDGKEYIDFFAGAGALNY-GHNNPKLKQALIDYLADDGI-IHSL-DMATEAKREFLETFNEIILKPRGLDYKVQFPGPTG  108 (412)
T ss_pred             CCCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhccc-eecc-ccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCc
Confidence            358899999887533221 12579999999998874221 1111 1123455556666543211011 1124655 5899


Q ss_pred             HHHHHHHHHHhcC-C-CCEEEEcCCCCcchHHHHHhC-CC------------eEEEeeccCCCCC-CCChhHHHhhcCC-
Q 014936          110 TQAIDVAMALLSR-P-GANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKGW-EVDLDDIESLADQ-  172 (415)
Q Consensus       110 ~~al~~~~~~l~~-~-gd~vi~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~~~~~l~~~~~~-  172 (415)
                      ++|++.+++.... . ..+|+....+|++....+... |.            .+..+|....... .-+++.+++.+++ 
T Consensus       109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~  188 (412)
T TIGR02407       109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS  188 (412)
T ss_pred             hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence            9999999988652 2 257999999999876554332 11            1122221100000 0236667777752 


Q ss_pred             ----CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCcc
Q 014936          173 ----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       173 ----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK  245 (415)
                          ...+.++..| +++.|. ..|.+.+++|.++|++||+++|+||++.++...|.... ....+.++  +   .+++|
T Consensus       189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD--i---~~~~K  263 (412)
T TIGR02407       189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD--I---VCLSK  263 (412)
T ss_pred             cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC--E---EEech
Confidence                1234556666 678888 57999999999999999999999999997665554321 11223332  2   35789


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCC-CcHHHHHHHHHHHHHHHHHHHHHh
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQ-PDEVFFKKTLNLLKQSVDICYNKI  323 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~l  323 (415)
                      .++..|+|+|++++++        ++ +.+... ...++..++++..++.+.|+. ..+.   +..+++++..+++.+.|
T Consensus       264 ~lg~~G~pigav~~~~--------~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l  331 (412)
T TIGR02407       264 SISGYGLPLALTLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERL  331 (412)
T ss_pred             hccCCccceeEEEEch--------hh-hccCCCccCCCCCccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHH
Confidence            9654499999999965        23 333222 223456777766665665542 2211   12223333333333333


Q ss_pred             ----hcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHH
Q 014936          324 ----KEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEEC  397 (415)
Q Consensus       324 ----~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~  397 (415)
                          +.++++. ...+..|+++|+.++..     .....+...+ .++||.+.+...+  .+.||+++.  .++++++.+
T Consensus       332 ~~l~~~~~~~~-~~vrg~Gl~~~l~l~~~-----~~~~~~~~~~-~~~Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~  402 (412)
T TIGR02407       332 DRIVAEYPELI-KQVRGRGLMQGIECGDG-----DLAGKIAKAA-FENGLIIETSGPN--DEVIKLLPPLTIDEETLQQG  402 (412)
T ss_pred             HHHHhhCCCce-EeeecceeEEEEEecCh-----HHHHHHHHHH-HHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHH
Confidence                3344333 33567799999999642     1133454544 5679999874322  367999884  789999999


Q ss_pred             HHHHHHHHH
Q 014936          398 LDRIKSFYQ  406 (415)
Q Consensus       398 l~~l~~~~~  406 (415)
                      +++|.++++
T Consensus       403 ~~~l~~~l~  411 (412)
T TIGR02407       403 LDILEQAVE  411 (412)
T ss_pred             HHHHHHHHh
Confidence            999999875

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.89  E-value=4.5e-20  Score=171.36  Aligned_cols=220  Identities=14%  Similarity=0.130  Sum_probs=168.7

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~  152 (415)
                      +....|++.||+.-        ..+..+++++|++|+.+++.++.++||+|+++...|.+....+    +..|+++..++
T Consensus        62 Pt~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd  133 (395)
T PRK08114         62 LTHFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFD  133 (395)
T ss_pred             hhHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEEC
Confidence            35577888888864        4568888888999999999999999999999999998776554    66899988876


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc--CcEEEEccccCCcccCCCCcccccc
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGV  230 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~  230 (415)
                      .       .|.+.+++++++++++|++.+|+||+|.+   .++++|+++|+++  |+++++|.+++....     .....
T Consensus       134 ~-------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v---~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~  198 (395)
T PRK08114        134 P-------LIGADIAKLIQPNTKVVFLESPGSITMEV---HDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALD  198 (395)
T ss_pred             C-------CCHHHHHHhcCCCceEEEEECCCCCCCEe---ecHHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHH
Confidence            3       36789999999999999999999999999   5688888888897  499999999976321     12233


Q ss_pred             cCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936          231 FGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKT  308 (415)
Q Consensus       231 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  308 (415)
                      ++.+   +++.|.+|.++.+| .-.|.++.++        +.++.++.. .......+|.....+..-|+.     +.-+
T Consensus       199 ~GaD---ivv~S~tKyl~Ghsdv~~G~v~~~~--------~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T-----L~lR  262 (395)
T PRK08114        199 FGID---ISIQAGTKYLVGHSDAMIGTAVANA--------RCWEQLRENSYLMGQMVDADTAYMTSRGLRT-----LGVR  262 (395)
T ss_pred             cCCc---EEEEcCcccccCCCcceeEEEEcCH--------HHHHHHHHHHHhccCCCCHHHHHHHHcCCCc-----HHHH
Confidence            4444   89999999877665 5566555432        344545433 233456677777777777766     7788


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          309 LNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      .++..++...+.+.|++.|.+..+.+|
T Consensus       263 ~~~~~~na~~va~~L~~hp~V~~V~yP  289 (395)
T PRK08114        263 LRQHEESSLKVAEWLAEHPEVARVNHP  289 (395)
T ss_pred             HHHHHHHHHHHHHHHHcCCCEeEEECC
Confidence            899999999999999988776545455

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.89  E-value=7.5e-20  Score=172.48  Aligned_cols=339  Identities=14%  Similarity=0.076  Sum_probs=220.3

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE--EeCChHHHHHHHHHHhcC-------
Q 014936           52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAMALLSR-------  122 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~--i~~g~~~al~~~~~~l~~-------  122 (415)
                      ++.|.+.+.+.+.+..... .+.......++.+.+.+++.+.+|.+-..+++.  +|+|+|+++.+++.+...       
T Consensus        52 ~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~  130 (431)
T TIGR01788        52 WMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME  130 (431)
T ss_pred             CCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence            4567788988888764322 222223345788888888887777431113454  489999999998866431       


Q ss_pred             -CC-----CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHH
Q 014936          123 -PG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ  196 (415)
Q Consensus       123 -~g-----d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~  196 (415)
                       .|     ..|+++.-.|+++...++..|+++..+++++ +++.+|+++|++++++++.+|+++..+|.||.+   ++++
T Consensus       131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i---dpi~  206 (431)
T TIGR01788       131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY---EDVK  206 (431)
T ss_pred             hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc---CCHH
Confidence             12     3799999999999999999999999999865 345689999999999999999999999999999   6788


Q ss_pred             HHHHHHhhc------CcEEEEccccCCccc---CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC
Q 014936          197 KLAETANKL------KTLVIADEVYGHLVF---GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR  267 (415)
Q Consensus       197 ~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  267 (415)
                      +|+++|+++      |+++++|.+|+++..   .+.....+.....   .-+..|.+|++ .....+|+++.++...   
T Consensus       207 ~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~---DSis~s~HK~~-~~P~g~G~l~~r~~~~---  279 (431)
T TIGR01788       207 ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRV---KSINVSGHKYG-LVYPGVGWVIWRDEEA---  279 (431)
T ss_pred             HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCc---eEEEECchhcc-CCCCCcEEEEEeChHH---
Confidence            888888899      999999999996442   1222222221111   14555889974 3333489998876321   


Q ss_pred             hHHHHHHHHh---hc-----cccCCchhHH--HHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-C
Q 014936          268 KPKVVERMKK---YF-----DILGDPATFI--QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-E  336 (415)
Q Consensus       268 ~~~~~~~~~~---~~-----~~~~~~~~~~--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~  336 (415)
                         +.+.+..   +.     ..+...+...  .......|.......+++..++..++.+++.+.|+++|+++++ .| .
T Consensus       280 ---l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~-~~~~  355 (431)
T TIGR01788       280 ---LPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEII-SDGS  355 (431)
T ss_pred             ---cchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEe-eCCC
Confidence               1122211   00     0011111111  1112222333345778899999999999999999999888855 43 2


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG---LKNWLRVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ....+.++++.....+ .+..++...| .+.|+.+.......   ...++|+++  ..+.+.++.+++.|++++.++
T Consensus       356 ~~~iV~Fr~~~~~~~~-~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (431)
T TIGR01788       356 GIPLVAFKLKDDADPG-YTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL  430 (431)
T ss_pred             CceEEEEEeCCCCCCC-cCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence            3334445554211001 1344555554 67798753322211   124689998  357889999999999887653

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.88  E-value=1.9e-20  Score=164.27  Aligned_cols=335  Identities=16%  Similarity=0.138  Sum_probs=244.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      .+++--+.+++   +.+...+|.+.+|+.+.++....      +--+...-..+|++.+|+..        ..+..++.+
T Consensus       170 ~k~VtVWCSND---YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH--------qK~aALlFs  238 (570)
T KOG1360|consen  170 EKKVTVWCSND---YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH--------QKEAALLFS  238 (570)
T ss_pred             cCceEEEecCc---cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh--------cCcceeeee
Confidence            45566666666   55677899999999999885211      11123344578999999988        566677777


Q ss_pred             ChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecC
Q 014936          108 GCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIIN  181 (415)
Q Consensus       108 g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~  181 (415)
                      ++.-|++..+..|.  -||..|..+.-.|.+.....+..++.-..+.+       -|+++|++++..    .+|+|.+..
T Consensus       239 SCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~svPKivAFEt  311 (570)
T KOG1360|consen  239 SCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPKSVPKIVAFET  311 (570)
T ss_pred             eeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCCCCCceEEEee
Confidence            77777777777765  37899999999999999999998888666655       267787777643    467888888


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC-CCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      .+..+|.+   .++++|++++++||.+.++||+|+-+.|+..+..--..-+.- .-.|+.+++.|+||+-|   ||+.+.
T Consensus       312 VhSM~Gav---cpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat  385 (570)
T KOG1360|consen  312 VHSMDGAV---CPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT  385 (570)
T ss_pred             eeccCCCc---CCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhh
Confidence            99999999   668999999999999999999999988875543321111111 11388899999999998   999886


Q ss_pred             CCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      .        .+++.++.+..   ++.+.+|....-+.++.+...-+.-...++..+++..++++.|.++ |+. + .|..
T Consensus       386 ~--------~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiP-V-i~~p  454 (570)
T KOG1360|consen  386 R--------KLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIP-V-IPNP  454 (570)
T ss_pred             h--------hHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCc-c-cCCC
Confidence            5        68888887732   3344455555444444433222334567788889999999999998 887 4 5666


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +.++-+++...     ....+....|+.++||++-.-.++..   ...+||+.  .++.+.++.+++.+..++.++
T Consensus       455 SHIiPv~vgda-----~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v  525 (570)
T KOG1360|consen  455 SHIIPVRVGDA-----ALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV  525 (570)
T ss_pred             cceeeeeccCH-----HHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence            66777776542     23567888899999999977665554   45789988  478899999999999988764

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.88  E-value=3.6e-20  Score=157.56  Aligned_cols=364  Identities=15%  Similarity=0.172  Sum_probs=245.6

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCCCCCCC-CCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhh
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSC-FHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRD   93 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~-~~~~~~~~~a~~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~   93 (415)
                      .+-.+...+.++.     +...+||+.|.-....+ ....|.++++-.....+.. -+.|-|.-|.+.+++..++.+-..
T Consensus        16 ~vf~~~~~y~~d~-----~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~   90 (410)
T KOG1412|consen   16 EVFKLNASYGEDL-----DPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGA   90 (410)
T ss_pred             HHHhhHHHhcccC-----CcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCC
Confidence            3444444444444     45668998886332222 1244666665544443322 257888899999999999988432


Q ss_pred             CCCCCCCCcEE--EeCChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCC-CeEEEeeccCCCCCCCChhHHHh
Q 014936           94 LPYKLTPNDVF--VTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIES  168 (415)
Q Consensus        94 ~~~~~~~~~i~--i~~g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~l~~  168 (415)
                      ..-.+..++++  =+-|||.|+.++...+.  -....|.+.+|+|..+...+...| .++..++.-....-.+|++.+..
T Consensus        91 ~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Ls  170 (410)
T KOG1412|consen   91 DSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLS  170 (410)
T ss_pred             CchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHH
Confidence            22234556653  45567888887776653  234579999999999999999999 55777776555556789998888


Q ss_pred             hcCCCc--eEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC--cccccccCCC-CCeEEEcc
Q 014936          169 LADQNT--VALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP--FVPMGVFGST-VPILTLGS  242 (415)
Q Consensus       169 ~~~~~~--~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~-~~~i~~~s  242 (415)
                      .++..+  ..+++..+ +||||+-.+.|++++|++..++++.+.+.|-+|.++.-++..  ...+..+... ..++++.|
T Consensus       171 dl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QS  250 (410)
T KOG1412|consen  171 DLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQS  250 (410)
T ss_pred             HHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhh
Confidence            776433  34455555 999999999999999999999999999999999998755322  1122222221 34799999


Q ss_pred             CccccCCCCceEEEEEeeCCCCCCChHHHHHHH----Hhh-ccccCCchhHHHHHHHHhhCCCc--HHH---HHHHHHHH
Q 014936          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM----KKY-FDILGDPATFIQAAVPSILQQPD--EVF---FKKTLNLL  312 (415)
Q Consensus       243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~a~~~~l~~~~--~~~---~~~~~~~~  312 (415)
                      |+|.||+.+-|+|-+..--     +++..+..+    ... ....+.++..+...+.+.|+...  ++|   ++.+..++
T Consensus       251 FaKNfGlYneRvGnltvv~-----~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI  325 (410)
T KOG1412|consen  251 FAKNFGLYNERVGNLTVVV-----NNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRI  325 (410)
T ss_pred             hhhhcccccccccceEEEe-----cChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999875421     123333333    222 22346778888899999998754  222   23333455


Q ss_pred             HHHHHHHHHHhhcC--CC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e
Q 014936          313 KQSVDICYNKIKEI--PC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A  388 (415)
Q Consensus       313 ~~~~~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~  388 (415)
                      ++.|..++..|..+  || +. -+..+.|+|.+..+.         . ..+..|.+++.|.+.+..        ||++ +
T Consensus       326 ~~MR~aLrd~L~aL~TPGtWD-HI~~QiGMFSyTGLt---------p-~qV~~li~~h~vyLl~~G--------RInisG  386 (410)
T KOG1412|consen  326 KKMRTALRDHLVALKTPGTWD-HITQQIGMFSYTGLT---------P-AQVDHLIENHKVYLLSDG--------RINISG  386 (410)
T ss_pred             HHHHHHHHHHHHhcCCCCcHH-HHHhhccceeecCCC---------H-HHHHHHHHhceEEEecCC--------cEeeec
Confidence            55666666666654  33 33 224567899887663         3 346778888999987644        9999 5


Q ss_pred             CChhhHHHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .....++...++|.++++..
T Consensus       387 LN~~NveyVAkAIde~Vr~~  406 (410)
T KOG1412|consen  387 LNMKNVEYVAKAIDETVRAI  406 (410)
T ss_pred             cccccHHHHHHHHHHHHHhh
Confidence            78889999999998888653

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.88  E-value=4.1e-19  Score=168.76  Aligned_cols=329  Identities=14%  Similarity=0.155  Sum_probs=207.4

Q ss_pred             cceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           35 KKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      .....|+.|.|.+....+ ..+.-.+++.+.+..... .+++  ...++++++|+++        ..+++++++|+++++
T Consensus        23 ~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~--------g~~~~v~~~sGt~al   91 (438)
T PRK15407         23 HAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFL--------GVRYALLVNSGSSAN   91 (438)
T ss_pred             cccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHh--------CCCeEEEECCHHHHH
Confidence            344557888875432211 223333444454443322 3333  2579999999998        335799999999999


Q ss_pred             HHHHHHh---------cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCC
Q 014936          114 DVAMALL---------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN  184 (415)
Q Consensus       114 ~~~~~~l---------~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~n  184 (415)
                      .+++.++         .++||+|+++.++|..+...+...|++++.+++++ .++.+|++.+++.+++++++|+++++  
T Consensus        92 ~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~--  168 (438)
T PRK15407         92 LLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT--  168 (438)
T ss_pred             HHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC--
Confidence            9999876         37899999999999999999999999999998864 35779999999999889999999875  


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeC
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~  261 (415)
                       +|..   .++++|.++|+++|+++|+|++|+.+. +.|..   +.+++.    +.++||+  |.+.. | ..|++++++
T Consensus       169 -~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~gd----~~~fSf~~~k~~~~-g-eGG~l~t~d  235 (438)
T PRK15407        169 -LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTFGD----IATLSFYPAHHITM-G-EGGAVFTND  235 (438)
T ss_pred             -CCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCee---eeccCc----eEEEeCCCCCCccc-c-CceEEEECC
Confidence             4443   578999999999999999999999865 33332   333332    4555665  55433 2 248888865


Q ss_pred             CCCCCChHHHHHHHHhhcccc----------------------------------------CCchhHHHHHHHHhhCCCc
Q 014936          262 PCGMFRKPKVVERMKKYFDIL----------------------------------------GDPATFIQAAVPSILQQPD  301 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~a~~~~l~~~~  301 (415)
                      +       ++.+.++....+.                                        ...+.+..+.+..-|    
T Consensus       236 ~-------~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL----  304 (438)
T PRK15407        236 P-------LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQL----  304 (438)
T ss_pred             H-------HHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHH----
Confidence            3       4555544332211                                        011111112222222    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCC-CcCCCCCCCc---e-EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKEIPC-ISCPHKPEGS---M-AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA  376 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p~~g---~-~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~  376 (415)
                       +.+++..++-+++.+++.+.|..+++ +.....+.+.   + .+.+.++...  + .+..++...| +++||.+.+...
T Consensus       305 -~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~Rd~l~~~L-~~~GI~~~~~~~  379 (438)
T PRK15407        305 -EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA--G-FTRVELVKYL-EENKIGTRLLFA  379 (438)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC--C-CCHHHHHHHH-HHCCCCccccCC
Confidence             44677777778888888888887764 3211122222   2 2223343210  1 1345666655 667997653221


Q ss_pred             --------CC------C----------CCeEEEEe--eCChhhHHHHHHHHHHHHH
Q 014936          377 --------VG------L----------KNWLRVTF--AVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       377 --------~~------~----------~~~iRi~~--~~~~~~l~~~l~~l~~~~~  406 (415)
                              |.      .          ...+-+-+  ..++++++..++.|+++++
T Consensus       380 ~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~  435 (438)
T PRK15407        380 GNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG  435 (438)
T ss_pred             CccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence                    00      0          11233333  3578999999999988774

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.88  E-value=9.9e-20  Score=168.75  Aligned_cols=282  Identities=16%  Similarity=0.194  Sum_probs=191.7

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~  153 (415)
                      ....+++.||+.-        ..+..+++++|++|+..++.+++++||+|+++...|.+....++    ..|+++..++.
T Consensus        56 t~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~  127 (386)
T PF01053_consen   56 TVRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP  127 (386)
T ss_dssp             HHHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred             cHHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence            4567777777775        34789999999999999999999999999999999998776654    46899888753


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC-cEEEEccccCCcccCCCCcccccccC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                             -|++++++++++++++|++-.|.||+..+   .++++|+++|+++| +++++|+.++....    ..++ .++
T Consensus       128 -------~d~~~l~~~l~~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~~----~~pL-~~G  192 (386)
T PF01053_consen  128 -------TDLEALEAALRPNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPYN----QNPL-ELG  192 (386)
T ss_dssp             -------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT----C-GG-GGT
T ss_pred             -------hhHHHHHhhccccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeeccccceee----eccC-cCC
Confidence                   37999999999999999999999999877   67899999999998 99999999876321    1122 233


Q ss_pred             CCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLN  310 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  310 (415)
                      .+   |++.|++|.++..|--+ |.+++++      ..++.+.++... ......++.....+..-|+.     +.-+.+
T Consensus       193 aD---ivv~S~TKyl~Ghsdv~~G~vv~~~------~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-----l~~R~~  258 (386)
T PF01053_consen  193 AD---IVVHSATKYLSGHSDVMGGAVVVNG------SSELYDRLREFRRLLGATLSPFDAWLLLRGLRT-----LPLRME  258 (386)
T ss_dssp             -S---EEEEETTTTTTTSSSE-EEEEEESS------HHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-----HHHHHH
T ss_pred             ce---EEEeeccccccCCcceeeEEEEECc------hhhhhhhhcchhhhcCccchHHHHHHHhcCCCc-----HHHHHH
Confidence            33   88999999977655554 4455433      125666666553 34456677777777777876     788889


Q ss_pred             HHHHHHHHHHHHhhcCCCCcCCCCC----------------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeE---E
Q 014936          311 LLKQSVDICYNKIKEIPCISCPHKP----------------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVI---I  371 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~---v  371 (415)
                      +..+++..+.+.|++.|.+.-+.+|                ..|..+.++++.        ..+.+..++..-++.   .
T Consensus       259 ~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~--------~~~~~~~f~~~l~l~~~~~  330 (386)
T PF01053_consen  259 RQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG--------GEEAARRFLDALKLFSIAP  330 (386)
T ss_dssp             HHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS--------HHHHHHHHHHH-SSSEESS
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc--------chhhhHhHHhhhhhHhhhh
Confidence            9999999999999988776645555                233466667753        223334444443433   1


Q ss_pred             EcCCCCC----------------------C-CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          372 LPGTAVG----------------------L-KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       372 ~~g~~~~----------------------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      +-|....                      . ++.||+|++..  +.+.+++.|+++++
T Consensus       331 SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlE--d~~dLi~Dl~~AL~  386 (386)
T PF01053_consen  331 SLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLE--DPDDLIADLEQALE  386 (386)
T ss_dssp             S-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS---HHHHHHHHHHHHH
T ss_pred             hcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccC--CHHHHHHHHHHhcC
Confidence            2222111                      0 46799999873  56667777776653

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.88  E-value=1e-19  Score=171.18  Aligned_cols=339  Identities=16%  Similarity=0.095  Sum_probs=215.2

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +++.++||..|.-....+. .+|.+.+++.+++..... .+  .....+.+..+|+++.+..    ..+.++++++|++|
T Consensus        34 dG~~~lD~~sg~~~~~lGh-~~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA  105 (395)
T PRK03715         34 NGKRYLDFIQGWAVNCLGH-CNPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA  105 (395)
T ss_pred             CCCEEEECCcChhhccCCC-CCHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence            5889999987643222222 369999999998875322 12  1234577888899886521    24689999999999


Q ss_pred             HHHHHHHhc------CCC-CEEEEcCCCCcchHHHHHh-CCCeEE---EeeccCC--CCCCCChhHHHhhcCCCceEEEe
Q 014936          113 IDVAMALLS------RPG-ANILLPRPGFPIYELSAAF-RHIEVR---HFDLLPD--KGWEVDLDDIESLADQNTVALVI  179 (415)
Q Consensus       113 l~~~~~~l~------~~g-d~vi~~~p~y~~~~~~~~~-~g~~~~---~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~i  179 (415)
                      ++.+++.+.      ++| .+|+..+.+|++....+.. .|....   ..|..+.  .....|++.+++.+.+++.++++
T Consensus       106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~  185 (395)
T PRK03715        106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML  185 (395)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence            999999875      123 5788888888876544332 232211   1111100  00013788999888766665555


Q ss_pred             cCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE
Q 014936          180 INPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (415)
Q Consensus       180 ~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  258 (415)
                      ...++..|.. .|.+.+++|.++|++||+++|+||++.++...|.... ...++....   +.+++|.++ .|+++|.++
T Consensus       186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv~PD---i~t~gK~lg-~G~p~~av~  260 (395)
T PRK03715        186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGIEPD---IMTLGKGIG-GGVPLAALL  260 (395)
T ss_pred             eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCCCCc---eeeehhhhh-CCcceEEEE
Confidence            5446667776 4689999999999999999999999998655554321 112222222   347799965 579999998


Q ss_pred             eeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC---CCCcCCCCC
Q 014936          259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI---PCISCPHKP  335 (415)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p  335 (415)
                      +++        ++..........++..++++.+++.+.|+...   -++..++++++.+++.+.|+++   .++. . ..
T Consensus       261 ~~~--------~i~~~~~~~~~~T~~g~pl~~aaala~L~~l~---~~~l~~~~~~~g~~l~~~L~~l~~~~~i~-~-vr  327 (395)
T PRK03715        261 AKA--------EVAVFEAGDQGGTYNGNPLMTAVGVAVISQLL---APGFLEGVRARGEYLKEKLLELSEERGLE-G-ER  327 (395)
T ss_pred             Ecc--------ccccccCCCcCCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHhhcCCcC-e-EE
Confidence            865        33311111122345667888888888876432   1345566666667777766643   1233 1 23


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhc---CeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE---SVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ..|+++-+.+...      .... +...+.+.   ||.+.+..    .+.+|+++.  .+++++++++++|.++++++
T Consensus       328 G~Glm~~i~l~~~------~~~~-~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~  394 (395)
T PRK03715        328 GEGLLRALLLGKD------IGPQ-IVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             cceeEEEEEecCc------hHHH-HHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            4577777776431      1222 23333444   99986432    368999994  78999999999999998753

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.88  E-value=5.2e-20  Score=172.53  Aligned_cols=341  Identities=13%  Similarity=0.058  Sum_probs=221.5

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG------YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      ...++|-...      ...++.+.+++...+.+....+      |+-.....+++....+..++.++  .+..+|-.-+ 
T Consensus        49 ~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~S-  119 (493)
T PRK13580         49 RSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPHS-  119 (493)
T ss_pred             hcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCCC-
Confidence            5567776665      3457889888877766432222      33334455666666666665555  2333554444 


Q ss_pred             hHHHHHHHHHHhcCC-------------------------------CCEEEEcCCCCcchHHH-----HHhCCCeEEEee
Q 014936          109 CTQAIDVAMALLSRP-------------------------------GANILLPRPGFPIYELS-----AAFRHIEVRHFD  152 (415)
Q Consensus       109 ~~~al~~~~~~l~~~-------------------------------gd~vi~~~p~y~~~~~~-----~~~~g~~~~~~~  152 (415)
                      |+.|+.+++.++++|                               ||+|+..++.++++...     +.........++
T Consensus       120 g~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~  199 (493)
T PRK13580        120 GADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYG  199 (493)
T ss_pred             cHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecc
Confidence            567777888888876                               79999887777554221     111124555566


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-cccc
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF  231 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~  231 (415)
                      ++++ ...+|.+++++.++++++.+++++.+|-++ ..   ++++|+++|+++|+++++|++|+.+.+.+..... ....
T Consensus       200 vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~  274 (493)
T PRK13580        200 VDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV  274 (493)
T ss_pred             cCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC
Confidence            6543 346999999999999999999998887644 53   5778888888999999999999988776433210 0111


Q ss_pred             CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936          232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLN  310 (415)
Q Consensus       232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  310 (415)
                      .  ...++++|++|++.  |.+.|++++++        ++.+.++... ...+++.++...+++..+.......+++.++
T Consensus       275 ~--~~D~vtgT~hKaL~--GP~GG~I~~~~--------~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~  342 (493)
T PRK13580        275 P--HADIVTTTTHKTLR--GPRGGLVLAKK--------EYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQ  342 (493)
T ss_pred             C--CCcEEEeCChhhcc--CCCeEEEEecH--------HHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHH
Confidence            1  12288899999862  33358888865        5677664332 2233444444444444444322122366889


Q ss_pred             HHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC------CCeEE
Q 014936          311 LLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL------KNWLR  384 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~iR  384 (415)
                      ++.++.+.|.+.|.+. |+.++.....+..+++.+....     .....+...|.+.||.+.+-..+..      ...||
T Consensus       343 ~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~-----~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLR  416 (493)
T PRK13580        343 QVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG-----LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIR  416 (493)
T ss_pred             HHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH-----HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEE
Confidence            9999999999999988 7773322345677787775321     1233556567888999986555443      46799


Q ss_pred             EEee------CChhhHHHHHHHHHHHHHH
Q 014936          385 VTFA------VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       385 i~~~------~~~~~l~~~l~~l~~~~~~  407 (415)
                      |++.      +++++++++++.|.++++.
T Consensus       417 Ig~~A~ttrg~teedi~~iad~l~~~l~~  445 (493)
T PRK13580        417 LGTPALTTLGMGSDEMDEVAELIVKVLSN  445 (493)
T ss_pred             eccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence            9983      2579999999999888764

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.88  E-value=6.5e-20  Score=176.10  Aligned_cols=339  Identities=12%  Similarity=0.072  Sum_probs=213.1

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCC---cHH----HHHHHHHHHhhhCCCCCCCCcE
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAG---LPL----TRRAIAEYLSRDLPYKLTPNDV  103 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g---~~~----lr~~ia~~~~~~~~~~~~~~~i  103 (415)
                      .+..++|-...      ...+|.+++++...+.+.....++.   ..|   ...    .|+.+++++      +.+++++
T Consensus        33 ~~~~l~l~~se------n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf------~a~~~~~  100 (452)
T PTZ00094         33 QIEGLELIASE------NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF------GLDPEEW  100 (452)
T ss_pred             HHcCeeEeccc------ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh------CCCcccc
Confidence            35678988886      4557889999988875422112221   111   222    345666666      3466777


Q ss_pred             EEe---CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----------CCCeEEEeeccCCCCCCCChhHHHhhc
Q 014936          104 FVT---SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----------RHIEVRHFDLLPDKGWEVDLDDIESLA  170 (415)
Q Consensus       104 ~i~---~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~l~~~~  170 (415)
                      .++   +||++++.+++.++.++||+|++....|.+.......          .+.++..+++++  ++.+|+++|++.+
T Consensus       101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l  178 (452)
T PTZ00094        101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA  178 (452)
T ss_pred             eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence            666   7899999999999999999999998888765443211          112334444543  3568999999998


Q ss_pred             CC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccC
Q 014936          171 DQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWI  248 (415)
Q Consensus       171 ~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~  248 (415)
                      +. +++.+++.  ++.+|...|   +++|.++|+++|+++++|++|+.+....... .++.  ..   .++++|++|++.
T Consensus       179 ~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~--~~---D~l~~S~hK~l~  248 (452)
T PTZ00094        179 KAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP--YA---DVVTTTTHKSLR  248 (452)
T ss_pred             HHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC--CC---cEEEcCCccCCC
Confidence            54 55655543  335888855   6666777889999999999999866543221 1211  12   278899999853


Q ss_pred             CCCceEEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      .  .+.|++++++..  .  ..+...+....  .+.++++.....++..+++.......++..+++.++++++.+.|.+.
T Consensus       249 G--P~Gg~l~~~~~~--~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~  322 (452)
T PTZ00094        249 G--PRSGLIFYRKKV--K--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR  322 (452)
T ss_pred             C--CCceEEEEeccc--c--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC
Confidence            3  334888775421  1  01222222111  11235566666666666654323456677889999999999999876


Q ss_pred             CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE-cCCCCC----CCCeEEEEee--C----ChhhHH
Q 014936          327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL-PGTAVG----LKNWLRVTFA--V----DPYSLE  395 (415)
Q Consensus       327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~----~~~~iRi~~~--~----~~~~l~  395 (415)
                       ++.+..........++.+...   +. +.. .+..+|+++||.+. ++..+.    .+++||+++.  +    +++|++
T Consensus       323 -g~~v~~~~~~~~~~~v~~~~~---~~-~~~-~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~  396 (452)
T PTZ00094        323 -GYDLVTGGTDNHLVLVDLRPF---GI-TGS-KMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFK  396 (452)
T ss_pred             -CcEEecCCCCCceEeecCCcC---CC-CHH-HHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHH
Confidence             766332111122344444321   11 334 45555677899994 444332    1579999993  2    489999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRH  408 (415)
Q Consensus       396 ~~l~~l~~~~~~~  408 (415)
                      .+++.|.++++..
T Consensus       397 ~l~~~l~~~~~~~  409 (452)
T PTZ00094        397 FVADFLDRAVKLA  409 (452)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988753

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=1.9e-19  Score=170.17  Aligned_cols=228  Identities=16%  Similarity=0.121  Sum_probs=162.2

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~  153 (415)
                      ....+++.++++.+        .+..++++++++|+.+++.++.++||+|+++...|.+..    ..+...|+++..++ 
T Consensus        70 t~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-  140 (437)
T PRK05613         70 TVEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-  140 (437)
T ss_pred             HHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence            45778888888872        245555566668888888888899999999999999764    34577899998886 


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                      ++     .|++++++++++++++|++.++.||+|.+   .++++|+++|+++|+++|+|.+++....    ..++ .++.
T Consensus       141 ~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v---~di~~I~~la~~~gi~livD~t~a~g~~----~~p~-~~Ga  207 (437)
T PRK05613        141 NP-----DDPESWQAAVQPNTKAFFGETFANPQADV---LDIPAVAEVAHRNQVPLIVDNTIATAAL----VRPL-ELGA  207 (437)
T ss_pred             CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCeEEEECCCccccc----cChH-HhCC
Confidence            22     27899999999999999999999999988   4588888888899999999999876332    1222 2333


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCCC----------------------------hHHHHHHHH--hhccccC
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----------------------------KPKVVERMK--KYFDILG  283 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----------------------------~~~~~~~~~--~~~~~~~  283 (415)
                      +   +++.|++|.++..|.-+|.+++.+....+.                            ...+..+..  .......
T Consensus       208 D---ivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~  284 (437)
T PRK05613        208 D---VVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGA  284 (437)
T ss_pred             C---EEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCC
Confidence            3   888899999877776667766632110000                            001111111  1123345


Q ss_pred             CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          284 DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       284 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ..+|.....+..-|+.     +.-+.++..+++..+.+.|++.|.+..+.+|
T Consensus       285 ~~~p~~a~l~~rgl~T-----L~lR~~~~~~nA~~lA~~L~~hp~V~~V~yP  331 (437)
T PRK05613        285 TLSPFNAWVTAQGLDT-----LSLRLERHNENAIKVAEFLNNHEKVAKVNFA  331 (437)
T ss_pred             CCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHHcCCCcceEECC
Confidence            6777777777777765     7788888899999999999988776544443

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.88  E-value=7.9e-20  Score=186.35  Aligned_cols=340  Identities=13%  Similarity=0.079  Sum_probs=221.3

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCC----CCCCcHHHHHHHHHHHhhhCCCCCCCC--cEEEeC
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSE---KFNGYA----PTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTS  107 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~i~~  107 (415)
                      .+.|+.+..+    ++++..+.+++.+.....   .+..|.    ...-+.+.|+.+|+++      +++++  .|++|+
T Consensus        35 ~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l------ga~~~~~~VvFts  104 (805)
T PLN02724         35 VVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF------NAPPSDYACVFTS  104 (805)
T ss_pred             CEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh------CCCccceEEEEeC
Confidence            5777777532    233455666665554321   111111    1123678889999988      44554  589999


Q ss_pred             ChHHHHHHHHHHh-cCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCC------CCCCCh--hHHHhhc-----
Q 014936          108 GCTQAIDVAMALL-SRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDK------GWEVDL--DDIESLA-----  170 (415)
Q Consensus       108 g~~~al~~~~~~l-~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~------~~~~~~--~~l~~~~-----  170 (415)
                      |+|+++++++.++ .++||+|++..-.|.+...   .++..|+++..++.+...      ...+++  +.+++.+     
T Consensus       105 naT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~  184 (805)
T PLN02724        105 GATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ  184 (805)
T ss_pred             ChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence            9999999999887 5789999998888876543   345679999998875211      112332  5566543     


Q ss_pred             -----CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc-----CcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936          171 -----DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-----KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (415)
Q Consensus       171 -----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (415)
                           .++++++.+++.+|.||.++|.+.+.++.+.++.+     ++++++|.+++.    +..+..+..++.+   +++
T Consensus       185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~D---fl~  257 (805)
T PLN02724        185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPAD---FVV  257 (805)
T ss_pred             cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCCC---EEE
Confidence                 14568899999999999999988666555544332     368999999987    4455556666555   788


Q ss_pred             ccCccccC-CCCceEEEEEeeCCCCCCChHHHHHHHHhh-------------------------ccccCCchhHHHHHHH
Q 014936          241 GSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------------------------FDILGDPATFIQAAVP  294 (415)
Q Consensus       241 ~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~a~~  294 (415)
                      .|++|+|+ ..|  +|+++++++        +.+.+...                         ..-.++++..+..++.
T Consensus       258 ~S~HK~~GgP~G--~G~L~vr~~--------~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~  327 (805)
T PLN02724        258 VSFYKIFGYPTG--LGALLVRRD--------AAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALR  327 (805)
T ss_pred             EecceeccCCCC--ceEEEEehh--------hhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHH
Confidence            89999987 346  888888652        22222111                         1112456666666666


Q ss_pred             HhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC------CCcCCCCCC--------CceEEEEecCccccCCCCCHHHHH
Q 014936          295 SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP------CISCPHKPE--------GSMAVMLKLNLSLLDDIIDDIDFC  360 (415)
Q Consensus       295 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~~~p~--------~g~~~~~~l~~~~~~~~~~~~~~~  360 (415)
                      ++++...+..++...++.+++.+++.+.|.+++      ++.++ .+.        .+..+.+.+....  +..-....+
T Consensus       328 aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iy-g~~~~~~~~~~r~~ivsFnv~~~~--~~~v~~~~v  404 (805)
T PLN02724        328 HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLY-GNHTFKLEFHIQGPIVTFNLKRAD--GSWVGHREV  404 (805)
T ss_pred             HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEc-CCCCCCCCcccccCEEEEEEEcCC--CCEeCHHHH
Confidence            666543333467778889999999999998875      45533 221        2334444443211  000123445


Q ss_pred             HHHHhhcCeEEEcCCCCCC-----------------------------------CCeEEEEee--CChhhHHHHHHHHHH
Q 014936          361 FKLAKEESVIILPGTAVGL-----------------------------------KNWLRVTFA--VDPYSLEECLDRIKS  403 (415)
Q Consensus       361 ~~ll~~~gi~v~~g~~~~~-----------------------------------~~~iRi~~~--~~~~~l~~~l~~l~~  403 (415)
                      ..++.++||.++.|..|..                                   .+.+|+|++  ++.+|++.+++.|++
T Consensus       405 ~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~  484 (805)
T PLN02724        405 EKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS  484 (805)
T ss_pred             HHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence            6677788999999987741                                   278999995  688999999999998


Q ss_pred             HHH
Q 014936          404 FYQ  406 (415)
Q Consensus       404 ~~~  406 (415)
                      .+-
T Consensus       485 ~~~  487 (805)
T PLN02724        485 SFV  487 (805)
T ss_pred             Hhh
Confidence            653

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.88  E-value=5.2e-20  Score=172.20  Aligned_cols=306  Identities=20%  Similarity=0.273  Sum_probs=205.5

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCC
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPG  133 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~  133 (415)
                      ++-.+++.+.++++.+..+++  -..++++++++|+        ..++++.++++|.|+.+++.++. ++||+|+++..+
T Consensus         5 ~e~~~~v~~~l~s~~~~~~g~--~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t   74 (363)
T PF01041_consen    5 EEEIDAVLEVLRSGWLSTYGP--YVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYT   74 (363)
T ss_dssp             HHHHHHHHHHHHHTCCSSSSH--HHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS
T ss_pred             HHHHHHHHHHHHhCCccCCCH--HHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCc
Confidence            566778888888775544443  4689999999999        57899999999999999999985 789999999999


Q ss_pred             CcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (415)
Q Consensus       134 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  213 (415)
                      |......+...|++++.+++++ +.+.+|++.+++++++++++|+++|.   .|..   .++.+|.++|+++|+++|+|.
T Consensus        75 ~~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lIeD~  147 (363)
T PF01041_consen   75 FPATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLIEDA  147 (363)
T ss_dssp             -THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-
T ss_pred             chHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEEEcc
Confidence            9999999999999999999976 56789999999999999999999885   3555   578999999999999999999


Q ss_pred             ccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc--------
Q 014936          214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL--------  282 (415)
Q Consensus       214 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  282 (415)
                      +++.+. +.|.   .+..++.    +.++||+  |.+..  ...|++++++       +++.++++.+....        
T Consensus       148 a~a~g~~~~g~---~~G~~gd----~~~fSf~~~K~i~~--geGG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~~  211 (363)
T PF01041_consen  148 AQAFGARYKGR---PVGSFGD----IAIFSFHPTKIITT--GEGGAVVTND-------PELAERARALRNHGRSRDAFRR  211 (363)
T ss_dssp             TTTTT-EETTE---ETTSSSS----EEEEESSTTSSS-S--SS-EEEEEST-------HHHHHHHHHHTBTTEETSECST
T ss_pred             ccccCceeCCE---eccCCCC----ceEecCCCCCCCcC--CCCeeEEecH-------HHHHHHhhhhhccCcCcccccc
Confidence            999865 3332   2333432    6667774  77533  3357887765       46777776654321        


Q ss_pred             ----------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc----e-EEEEecCc
Q 014936          283 ----------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS----M-AVMLKLNL  347 (415)
Q Consensus       283 ----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g----~-~~~~~l~~  347 (415)
                                ...+.+..+.+..-|+     .+++..++-+++.+.+.+.|..++++.....+...    + .+.+.++.
T Consensus       212 ~~~~~~~g~n~rm~~~~AAigl~QL~-----~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~  286 (363)
T PF01041_consen  212 YRHELPPGYNFRMSELQAAIGLAQLK-----RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPD  286 (363)
T ss_dssp             TEESSSS--B-B-BHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETC
T ss_pred             ccccccCCcccccHHHHHHHHHHHHH-----HhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccc
Confidence                      1223333333334443     37788888889999999999988776322222221    1 23344443


Q ss_pred             cccCCCCCHHHHHHHHHhhcCeEEEcCCC-CC-------C----------------CCeEEEEe--eCChhhHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESVIILPGTA-VG-------L----------------KNWLRVTF--AVDPYSLEECLDRI  401 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~~-------~----------------~~~iRi~~--~~~~~~l~~~l~~l  401 (415)
                      ...   .+-.++...| ++.||.+.+... +.       .                ...+-+.+  ..++++++..++.|
T Consensus       287 ~~~---~~rd~l~~~L-~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~i  362 (363)
T PF01041_consen  287 EAL---ADRDELVEAL-RARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAI  362 (363)
T ss_dssp             CGC---STHHHHHHHH-HHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHH
T ss_pred             ccc---chHHHHHHHH-HHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhcc
Confidence            111   1344555554 677999987552 10       0                12355555  36788888888776


Q ss_pred             H
Q 014936          402 K  402 (415)
Q Consensus       402 ~  402 (415)
                      +
T Consensus       363 r  363 (363)
T PF01041_consen  363 R  363 (363)
T ss_dssp             H
T ss_pred             C
Confidence            4

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.87  E-value=1.8e-19  Score=163.48  Aligned_cols=343  Identities=18%  Similarity=0.128  Sum_probs=224.2

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .++.+||+..+.-..-. --.+|.|.+|+++++..+.  .|+.|   .+++-.+|+.+.+..+   ..+.+-+++++|+|
T Consensus        51 DGn~YIDy~~~~Gp~il-GH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEA  121 (432)
T COG0001          51 DGNEYIDYVLGWGPLIL-GHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEA  121 (432)
T ss_pred             CCCEeeehhccCccccc-CCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHH
Confidence            48899999888732211 1246889999999999875  45543   2555666666655433   45899999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHH-hCCCeEEEe--ecc---CC--------CCCCCChhHHHhhcCCC--c
Q 014936          113 IDVAMALLS--RPGANILLPRPGFPIYELSAA-FRHIEVRHF--DLL---PD--------KGWEVDLDDIESLADQN--T  174 (415)
Q Consensus       113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~--~~~---~~--------~~~~~~~~~l~~~~~~~--~  174 (415)
                      ...+++...  -.-|+|+..+-||++..+.+. ..|......  |..   +.        -.| -|++.++++++..  .
T Consensus       122 tmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-ND~~al~~~~~~~g~~  200 (432)
T COG0001         122 TMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-NDLEALEEAFEEYGDD  200 (432)
T ss_pred             HHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-CCHHHHHHHHHHcCCc
Confidence            999998864  122899999999998776543 333111100  100   00        011 2899999988764  5


Q ss_pred             eEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936          175 VALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (415)
Q Consensus       175 ~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  251 (415)
                      .+.+|+.|  .| .|. ....+.+++|.++|+++|+++|.||+..++...-.+......+.+|     +.++.|. ...|
T Consensus       201 IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGGG  273 (432)
T COG0001         201 IAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGGG  273 (432)
T ss_pred             EEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcCC
Confidence            67788888  45 555 4567779999999999999999999999877653333344444443     5578999 7899


Q ss_pred             ceEEEEEeeCCCCCCChHHHHHHHHhhc----cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHh----
Q 014936          252 WRLGWFVTTDPCGMFRKPKVVERMKKYF----DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI----  323 (415)
Q Consensus       252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l----  323 (415)
                      +++|.+.++.        ++++.+....    .-+...+|+++.|..+.|+....+  +...+++.+..+.|.+.|    
T Consensus       274 lP~ga~gGr~--------eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~--~~~y~~l~~~~~~L~~gl~~~~  343 (432)
T COG0001         274 LPIGAFGGRA--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE--EGVYERLDALGERLAEGLRAAA  343 (432)
T ss_pred             cceeeeccHH--------HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHH
Confidence            9999999865        6777654432    234577899999988888653210  013444444444444444    


Q ss_pred             hcCCCCcCCCCCCCceEEEEecCccccC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHH
Q 014936          324 KEIPCISCPHKPEGSMAVMLKLNLSLLD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLE  395 (415)
Q Consensus       324 ~~~~~~~~~~~p~~g~~~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~  395 (415)
                      .+. ++.......+++|.+. +......        +...-..+...+| ++||.+.|+.+    ...=+|..+++++|+
T Consensus       344 ~~~-g~~~~v~~~gsm~~i~-F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~~----ea~flS~ahte~di~  416 (432)
T COG0001         344 ERH-GIPLTVNRVGSMFGIF-FTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQF----EAGFLSTAHTEEDID  416 (432)
T ss_pred             HHh-CCCeEEeeecceEEEE-ecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCccc----cceeeecccCHHHHH
Confidence            444 5553323344444332 2221010        1111345566555 45999998753    345677789999999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRHA  409 (415)
Q Consensus       396 ~~l~~l~~~~~~~~  409 (415)
                      ..++.+.++++++.
T Consensus       417 ~~~~a~~~~~~~~~  430 (432)
T COG0001         417 RTLEAADEAFKELA  430 (432)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999998887654

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.87  E-value=5.5e-19  Score=168.79  Aligned_cols=355  Identities=14%  Similarity=0.091  Sum_probs=211.5

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc-EEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~i~~g~~  110 (415)
                      .+|+.++||..|...... --.+|.+.+++.+++.........  ....+.+..+|+.+.+..+....... ++++++|+
T Consensus        36 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGs  112 (442)
T TIGR00709        36 VEGKEYLDFLAGAGTLAL-GHNHPNMKQKILDYLQSGLPLHTL--DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGA  112 (442)
T ss_pred             CCCCEEEEccccHhhhcC-CCCCHHHHHHHHHHHHhccCcccc--ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHH
Confidence            358899999888532211 124789999999988753211110  01124555556655443221101124 55668999


Q ss_pred             HHHHHHHHHhcC-C-CCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCC--------Ch----
Q 014936          111 QAIDVAMALLSR-P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV--------DL----  163 (415)
Q Consensus       111 ~al~~~~~~l~~-~-gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--------~~----  163 (415)
                      +|++.+++.... . ..+|+....+|++....+.....             .+..++..  +.+..        +.    
T Consensus       113 EA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  190 (442)
T TIGR00709       113 DAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPFGIGGEAGSNASI  190 (442)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccccCCchhHHHHHH
Confidence            999999987641 2 25799999999987665543211             11222211  11111        11    


Q ss_pred             hHHHhhcC-----CCceEEEecCC-CCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC
Q 014936          164 DDIESLAD-----QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (415)
Q Consensus       164 ~~l~~~~~-----~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  236 (415)
                      +.+++.+.     ....+.++..| ++..| ..+|.+.++++.++|++||+++|.||++.++...|.. .....++..+.
T Consensus       191 ~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~a~~~~gv~PD  269 (442)
T TIGR00709       191 EYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTM-FAFEHAGIEPD  269 (442)
T ss_pred             HHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHHcCCCCc
Confidence            11333332     12234444444 44445 5589999999999999999999999999998776642 22223333333


Q ss_pred             eEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936          237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS  315 (415)
Q Consensus       237 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  315 (415)
                      ++   +++|.++. |+++|++++++        + .+.+... ...+++.++++++++.+.|+...++   ...++++++
T Consensus       270 iv---~~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~  333 (442)
T TIGR00709       270 FV---VMSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDD---NLAQNAQER  333 (442)
T ss_pred             EE---EEcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence            34   37999766 89999999865        3 2332221 2345678999999999998653222   344555666


Q ss_pred             HHHHHHHhhc----CCCCcCCCCCCCceEEEEecCccc-cCC----CC---CHHHHHHHHHhhcCeEEEcCCCCCCCCeE
Q 014936          316 VDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSL-LDD----II---DDIDFCFKLAKEESVIILPGTAVGLKNWL  383 (415)
Q Consensus       316 ~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~-~~~----~~---~~~~~~~~ll~~~gi~v~~g~~~~~~~~i  383 (415)
                      .+++.+.|++    .|.+. . ...-|+++.+.+.... ..+    ..   .....+...+.++||.+.+....  .+.+
T Consensus       334 g~~l~~~L~~l~~~~~~v~-~-vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~--~~~l  409 (442)
T TIGR00709       334 GERITSFLDDMIKEHPCIG-N-VRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGRE--GEVF  409 (442)
T ss_pred             HHHHHHHHHHHHHhCCCee-e-eeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCC--CCEE
Confidence            6666666654    33332 1 3455777777774321 000    00   01222333445679998764322  3688


Q ss_pred             EEEee--CChhhHHHHHHHHHHHHHHHHHHh
Q 014936          384 RVTFA--VDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       384 Ri~~~--~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      |+.+.  .++++++++++++.+++.+..+++
T Consensus       410 ~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~~  440 (442)
T TIGR00709       410 RLLCPITIDQEECEEGISRFKQAVEEALAEV  440 (442)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            98884  789999999999999998876654

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.87  E-value=7.1e-21  Score=172.85  Aligned_cols=226  Identities=15%  Similarity=0.142  Sum_probs=155.3

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD  156 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~  156 (415)
                      .-+.++++.+|++++       ..+.+++++|+++++.+++.+++++||+|+++.++|.+....+...|++++.++....
T Consensus        59 g~i~~~~~~~A~~~g-------a~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~  131 (294)
T cd00615          59 GPIKEAQELAARAFG-------AKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN  131 (294)
T ss_pred             hHHHHHHHHHHHHhC-------CCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence            347889999999983       2345556999999999999999999999999999999999999999999988876443


Q ss_pred             CC----CCCChhHHHhhcC--CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-ccCCCCccccc
Q 014936          157 KG----WEVDLDDIESLAD--QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMG  229 (415)
Q Consensus       157 ~~----~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~  229 (415)
                      .+    ..+|++.++++++  ++++++++++| |++|.+++   +++|+++|+++|+++|+||+|+.. .+.+.......
T Consensus       132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~  207 (294)
T cd00615         132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAA  207 (294)
T ss_pred             cccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcchh
Confidence            32    3689999999885  46789999999 68999965   788999999999999999999743 34332222221


Q ss_pred             ccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEVFFKK  307 (415)
Q Consensus       230 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  307 (415)
                      .   .+..+++.|++|+  ++|++.|+++..+.. ..    ...++...  ...+.+++.....++..++... ..+-++
T Consensus       208 ~---~~~div~~S~hK~--l~g~~~~~~l~~~~~-~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~-~~~g~~  276 (294)
T cd00615         208 M---AGADIVVQSTHKT--LPALTQGSMIHVKGD-LV----NPDRVNEALNLHQSTSPSYLILASLDVARAMM-ALEGKE  276 (294)
T ss_pred             h---cCCcEEEEchhcc--cchHhHHHHHHhCCC-cC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHH-HHHhHH
Confidence            1   2345899999998  477776555433221 11    11222222  1123456665655555555321 122234


Q ss_pred             HHHHHHHHHHHHHHHhh
Q 014936          308 TLNLLKQSVDICYNKIK  324 (415)
Q Consensus       308 ~~~~~~~~~~~l~~~l~  324 (415)
                      ..+++.++.+.+++.|+
T Consensus       277 ~~~~~~~~~~~~r~~l~  293 (294)
T cd00615         277 LVEELIELALYARQEIN  293 (294)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            45556666666666554

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK06541 hypothetical protein; Provisional

Probab=99.86  E-value=8.9e-19  Score=167.55  Aligned_cols=356  Identities=16%  Similarity=0.111  Sum_probs=218.7

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-.... --.+|.+.+++++++....+.  .......+.+..+|+.+.+..+  ...+.++++++|++
T Consensus        49 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Av~~q~~~~~~~--~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse  123 (460)
T PRK06541         49 DRGKRYLDGLAGLFVVQV-GHGRAELAEAAAKQAGTLAFF--PLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSE  123 (460)
T ss_pred             CCCCEEEECCccHHhccC-CCCCHHHHHHHHHHHhhCcCc--cccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHH
Confidence            358889999887422111 124799999999998753221  1101112344445555543222  12368999999999


Q ss_pred             HHHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHHhC-CC------------eEEEeeccCCCC---CCCC-----
Q 014936          112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKG---WEVD-----  162 (415)
Q Consensus       112 al~~~~~~l~~-------~-gd~vi~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~---~~~~-----  162 (415)
                      |++.+++....       + ..+|+...-+|++....+... |.            .+..++......   +.-+     
T Consensus       124 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  203 (460)
T PRK06541        124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFG  203 (460)
T ss_pred             HHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHH
Confidence            99999987541       1 267899999998866544322 11            112222110000   1111     


Q ss_pred             ---hhHHHhhcC---CCceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936          163 ---LDDIESLAD---QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (415)
Q Consensus       163 ---~~~l~~~~~---~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  234 (415)
                         ++.+++.++   +...+.+++.| +++.|.+. |.+.+++|.++|+++|+++|+||++.++...|... ....++..
T Consensus       204 ~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~  282 (460)
T PRK06541        204 RWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYV  282 (460)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCC
Confidence               356776664   34567788888 78899875 58889999999999999999999997765444322 12223322


Q ss_pred             CCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936          235 VPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPDEVFFKKT  308 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  308 (415)
                      +.++   +++|.++ .|+ ++|++++++        ++.+.+...     ...+...++++.+++.+.|+...   -+..
T Consensus       283 PDiv---t~gK~l~-~G~~pigav~~~~--------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~---~~~~  347 (460)
T PRK06541        283 PDII---TCAKGIT-SGYSPLGAMIASD--------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFE---REGL  347 (460)
T ss_pred             CCEE---Eeccccc-CCccceeEEEEcH--------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHH---hccH
Confidence            2333   5899965 776 999999975        566666432     11255678888888888876421   2245


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCcccc--CCCCC------HHHHHHHHHhhcCeEEEcCCCCCC
Q 014936          309 LNLLKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLL--DDIID------DIDFCFKLAKEESVIILPGTAVGL  379 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~--~~~~~------~~~~~~~ll~~~gi~v~~g~~~~~  379 (415)
                      .++++++.+++.+.|+++....++ .....|.++-+.+.....  .....      ....+...+.++||.+.+.. .+ 
T Consensus       348 ~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~g-  425 (460)
T PRK06541        348 LDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD-RG-  425 (460)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC-CC-
Confidence            677778888888888765222211 123456676666632110  00000      01123334456799998732 11 


Q ss_pred             CCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936          380 KNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       380 ~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      ...+|+++.  .+++++++++++|.+++++.-.
T Consensus       426 ~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~  458 (460)
T PRK06541        426 DPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA  458 (460)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            367999995  7999999999999999976543

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.86  E-value=1.7e-18  Score=158.32  Aligned_cols=286  Identities=17%  Similarity=0.136  Sum_probs=202.4

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~  147 (415)
                      ++++ +....|++.++++-        ..+..+.+++|.+|+..++.+++++||+|+++...|.+....+    +..|++
T Consensus        59 R~~n-PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~  129 (396)
T COG0626          59 RTGN-PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVE  129 (396)
T ss_pred             cCCC-ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeE
Confidence            3443 45678888888875        5778999999999999999999999999999999998766544    567888


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV  226 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  226 (415)
                      +..++.       -+.+.+++++. +++++|++-.|.||+-.+   .|+.+|+++|+++|+.+|+|+.++...+-    .
T Consensus       130 ~~~~d~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q----~  195 (396)
T COG0626         130 VTFVDP-------GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQ----R  195 (396)
T ss_pred             EEEECC-------CChHHHHHHhcccCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCccccccc----C
Confidence            887642       24556666666 599999999999999777   77999999999999999999999864422    1


Q ss_pred             cccccCCCCCeEEEccCccccCCCCceEEEEEe-eCCCCCCChHHHHHHHHhh-c-cccCCchhHHHHHHHHhhCCCcHH
Q 014936          227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT-TDPCGMFRKPKVVERMKKY-F-DILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       227 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      + ..++.+   |++.|.+|.++..+-=+|.++. ++       .++.+.+... . ......+|...+.+.+-|+.    
T Consensus       196 P-L~~GaD---IVvhSaTKyl~GHsDvl~G~v~~~~-------~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT----  260 (396)
T COG0626         196 P-LELGAD---IVVHSATKYLGGHSDVLGGVVLTPN-------EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT----  260 (396)
T ss_pred             h-hhcCCC---EEEEeccccccCCcceeeeEEecCh-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch----
Confidence            2 223443   9999999998776555555444 43       2455554222 2 34566788888888777776    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhh-
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKE-  366 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~-  366 (415)
                       +.-+.++..+++..+.+.|++.|.+.-+.+|.                .|-.+.+++..        + +.+..++.. 
T Consensus       261 -L~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~--------~-~~~~~f~~~L  330 (396)
T COG0626         261 -LALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN--------E-EAAKKFLDSL  330 (396)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC--------h-HHHHHHHHhC
Confidence             77888899999999999999888877666774                44455566653        1 223333333 


Q ss_pred             --cCeEEEcCCCCCC-----------------------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          367 --ESVIILPGTAVGL-----------------------KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       367 --~gi~v~~g~~~~~-----------------------~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                        ..+..+-|.....                       ++-||+|++.  |+++.+++.|++++++
T Consensus       331 ~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl--Ed~eDLi~Dl~~Al~~  394 (396)
T COG0626         331 KLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL--EDVEDLIADLEQALAK  394 (396)
T ss_pred             CccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHh
Confidence              3333344432110                       4679999986  3555566666666654

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.86  E-value=3.1e-19  Score=151.14  Aligned_cols=326  Identities=17%  Similarity=0.219  Sum_probs=216.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      -.+.+||.+...     .-|..++++++.++-..++  .|+......+|++.+|+.++       +...+++++|+. ++
T Consensus        20 ~~~~vDLRSDTv-----T~PTdeMr~am~eA~vgDd--VyGeD~tt~rLE~~vA~l~G-------KEAgLFv~SGTm-gN   84 (384)
T KOG1368|consen   20 THRSVDLRSDTV-----TVPTDEMRRAMAEASVGDD--VYGEDPTTNRLEQRVAELFG-------KEAGLFVPSGTM-GN   84 (384)
T ss_pred             eeeccccccccc-----cCChHHHHHHHhhcccCcc--cccCCccHHHHHHHHHHHhC-------ccceeeeccccc-cc
Confidence            345678877763     3356889999988876655  45555566899999999983       333455555554 44


Q ss_pred             HHHHHH-hcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--------CceEEEecC
Q 014936          114 DVAMAL-LSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--------NTVALVIIN  181 (415)
Q Consensus       114 ~~~~~~-l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~i~~  181 (415)
                      .++++. +-++|.+||+.+-+|--..+   .....|+.+..+.  ++++..+++++++.+++.        -|++|.+-|
T Consensus        85 llaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~--~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclEN  162 (384)
T KOG1368|consen   85 LLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVK--NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLEN  162 (384)
T ss_pred             HHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeee--eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeec
Confidence            555555 55799999999988853332   2345566666664  445667999999998862        468899999


Q ss_pred             CCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      .+|-+| .++|.+++.++.+||+++|+.++.|.+..+-.-...+ .++..+...-..|.+ .+||.+++|   +|-+++.
T Consensus       163 T~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasg-V~vk~i~~~fDSVsi-CLSKglgAP---VGSViVG  237 (384)
T KOG1368|consen  163 THNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASG-VPVKKICSAFDSVSI-CLSKGLGAP---VGSVIVG  237 (384)
T ss_pred             cccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcC-CCHHHHHHhhhhhhh-hhhccCCCC---cccEEEc
Confidence            976565 9999999999999999999999999997654322111 122222111111333 579997665   6877765


Q ss_pred             CCCCCCChHHHHHHHHhhc-cccCCc--hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-C
Q 014936          261 DPCGMFRKPKVVERMKKYF-DILGDP--ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-E  336 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~  336 (415)
                      +       .+++++.+.++ ...++.  +.+..+|+..+|.+    .+. ..+.-.+++..+.+.++..+++. +..| .
T Consensus       238 ~-------k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~----~~~-~L~~dHk~A~~lAe~~~~~~~i~-v~v~a~  304 (384)
T KOG1368|consen  238 S-------KDFIDKARHFRKALGGGMRQSGVLAAAALVALDE----NVP-LLRADHKRAKELAEYINTPEEIR-VEVPAV  304 (384)
T ss_pred             c-------HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc----chH-HHHHHHHHHHHHHHHhcccccee-eecchh
Confidence            4       25777766653 333332  33333344444432    223 34445566777788888776677 4455 6


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS  403 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~  403 (415)
                      ..+++.+.+...++    +..+++..+ +++||.+.+|..    ..+|+.+  ..++++++..+..+.+
T Consensus       305 etNiv~~~l~q~~~----~~~~l~~~~-~k~gi~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~~k  364 (384)
T KOG1368|consen  305 ETNIVNMVLCQARL----TAEELCKFL-EKNGILLMGGAS----RRIRIVLHHQVTDEDVEYVKSVLSK  364 (384)
T ss_pred             hcceeeeecccccC----CHHHHHHHH-HHCCeEEeeccc----cceEEEEEEecCHHHHHHHHHHHHH
Confidence            67788876754432    567777665 778999998764    4589999  4789999999998853

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.86  E-value=8.2e-19  Score=167.38  Aligned_cols=350  Identities=16%  Similarity=0.135  Sum_probs=216.3

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +|+.++|+..|.-.... --.+|.+.+++.+++......  .. ....+.+..+|+.+.+..+  -..+.++++++|++|
T Consensus        80 dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~ql~~l~~~--~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA  153 (459)
T PRK11522         80 QGQEFIDCLGGFGIFNV-GHRNPVVVSAVQNQLAKQPLH--SQ-ELLDPLRAMLAKTLAALTP--GKLKYSFFCNSGTES  153 (459)
T ss_pred             CCCEEEECCcCHHhhhc-CCCCHHHHHHHHHHHhhCccc--cc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCchHH
Confidence            47789999777321111 124799999999998753221  11 1123444555555543222  123689999999999


Q ss_pred             HHHHHHHhc----CCC-CEEEEcCCCCcchHHHHHhCCCeE-EE---eeccCCCC--CCCChhHHHhhcCC-----CceE
Q 014936          113 IDVAMALLS----RPG-ANILLPRPGFPIYELSAAFRHIEV-RH---FDLLPDKG--WEVDLDDIESLADQ-----NTVA  176 (415)
Q Consensus       113 l~~~~~~l~----~~g-d~vi~~~p~y~~~~~~~~~~g~~~-~~---~~~~~~~~--~~~~~~~l~~~~~~-----~~~~  176 (415)
                      ++.+++...    ++| ..|+....+|++....+....... ..   .+..+.-.  .-.|.+.+++.++.     ...+
T Consensus       154 ve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iA  233 (459)
T PRK11522        154 VEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVA  233 (459)
T ss_pred             HHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEE
Confidence            999998764    123 368888999998765543322111 10   11100000  01267777776642     3345


Q ss_pred             EEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ce
Q 014936          177 LVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WR  253 (415)
Q Consensus       177 v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r  253 (415)
                      .+++.| ....|.+ .|.+.++++.++|++||+++|+||++.++...|... ....++..+.++   +++|.++ .| ++
T Consensus       234 avIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~gK~lg-gG~~P  308 (459)
T PRK11522        234 AVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENVQPDIL---CLAKALG-GGVMP  308 (459)
T ss_pred             EEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCCCCCEE---Eechhhh-CCCcc
Confidence            667777 5556775 577889999999999999999999998765555421 222233222233   7799954 56 68


Q ss_pred             EEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----C
Q 014936          254 LGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----I  326 (415)
Q Consensus       254 ~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~  326 (415)
                      +|.+++.+        ++.+.+...   ...++..+|++.+++.+.|+...++   +..++++++-+++.+.|++    .
T Consensus       309 igav~~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~  377 (459)
T PRK11522        309 IGATIATE--------EVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREY  377 (459)
T ss_pred             ceeEEEcH--------HHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99999865        566655321   2234566888888888888653222   3445566666666666654    3


Q ss_pred             CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936          327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF  404 (415)
Q Consensus       327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~  404 (415)
                      |.+. ......|.++.+.+...     .....+...+ .++||.+.+...  ....+|+.+  ..+++++++++++|.++
T Consensus       378 ~~~i-~~VrG~Gl~~giel~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~l~~~  448 (459)
T PRK11522        378 PDLV-QEARGKGMLMAIEFVDN-----EIGYNFASEM-FRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVLKAARKA  448 (459)
T ss_pred             CCce-eeEEeceeEEEEEecCc-----hHHHHHHHHH-HHCCeEEEecCC--CCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence            3211 11234577777777531     1134455555 567999976421  246899988  47899999999999999


Q ss_pred             HHHHHHHhh
Q 014936          405 YQRHAKQLQ  413 (415)
Q Consensus       405 ~~~~~~~~~  413 (415)
                      +++..+.++
T Consensus       449 l~~~~~~~~  457 (459)
T PRK11522        449 LAAMRVSVE  457 (459)
T ss_pred             HHHHHHhhc
Confidence            988776553

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.86  E-value=1.7e-19  Score=168.04  Aligned_cols=311  Identities=14%  Similarity=0.081  Sum_probs=204.2

Q ss_pred             CCCcHHHHHHHHHHHhcC-C--CCCCCCC-------CCcHHHHHHHHHHHhhhCCCCC-CCCcEEEeCC-hHHHHHHHHH
Q 014936           51 FHTTHVATEAVAEALLSE-K--FNGYAPT-------AGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSG-CTQAIDVAMA  118 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~-~--~~~y~~~-------~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i~~g-~~~al~~~~~  118 (415)
                      ...++.+++++.+.+... .  -..|...       .-+.+.|+.++++++      . +++++++|+| +|+++++++.
T Consensus         8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~------~~~~~~vvf~~gs~T~a~~~~~~   81 (355)
T cd00611           8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLN------IPDNYKVLFLQGGATGQFAAVPL   81 (355)
T ss_pred             CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEEcCCchHHHHHHHH
Confidence            567899999999887421 0  0111111       235677888888873      3 4578999988 9999999999


Q ss_pred             HhcC---CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC-hhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          119 LLSR---PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD-LDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       119 ~l~~---~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      .+..   +||.|++ .+......+.++..|+++..++.+.+.++ .+ .+..+..+++++++|.+++..|.||..++   
T Consensus        82 ~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~---  156 (355)
T cd00611          82 NLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD---  156 (355)
T ss_pred             hcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc---
Confidence            9987   5556654 22222334477888999998887432222 13 33333445678999999999999999843   


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                           ++++.+|+++++|.+++.    |..+..+..++     +.+.|.+|.||.+|  +|++++++        ++.++
T Consensus       157 -----~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~--------~~~~~  212 (355)
T cd00611         157 -----EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK--------DLLGK  212 (355)
T ss_pred             -----eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECH--------HHHhh
Confidence                 233458999999999997    33334444433     45566899988777  88888865        22222


Q ss_pred             HHh-------------hccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCc-CCCCC--CC
Q 014936          275 MKK-------------YFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCIS-CPHKP--EG  337 (415)
Q Consensus       275 ~~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~p--~~  337 (415)
                      +..             .....++++.....++.++|+...+. .++.+.++.+++.+++.+.|+++||+. ....+  ..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs  292 (355)
T cd00611         213 ARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARS  292 (355)
T ss_pred             cccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcC
Confidence            111             11113567777778887777654445 588899999999999999999997763 11111  12


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      +..+.+.++..     ....++.. .+.+.|+.+.++..  ..+.+|+|+.  ++.+|++.+++.|+++
T Consensus       293 ~~vvsf~~~~~-----~l~~~~~~-~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         293 RMNVPFRLGKE-----ELEKEFLK-EAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             ceEEEEEcCCh-----hhhHHHHH-HHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            23344444421     01233333 34567998655543  3478999995  5899999999998874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.86  E-value=7.3e-19  Score=162.57  Aligned_cols=312  Identities=15%  Similarity=0.092  Sum_probs=207.8

Q ss_pred             CcHHHHHHHHHHHhcC---CCCCCCCC-------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC-hHHHHHHHHHHhc
Q 014936           53 TTHVATEAVAEALLSE---KFNGYAPT-------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG-CTQAIDVAMALLS  121 (415)
Q Consensus        53 ~~~~~~~a~~~~~~~~---~~~~y~~~-------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g-~~~al~~~~~~l~  121 (415)
                      .|..+++++.+.+...   ....+...       .-+.++++.+++++    +.+ +..++++++| +|.++++++..+.
T Consensus         3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgT~a~ea~~~nl~   77 (349)
T TIGR01364         3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELL----NIP-DNYEVLFLQGGATGQFAAVPLNLL   77 (349)
T ss_pred             CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHh----CCC-CCceEEEEcCCchHHHHHHHHhcC
Confidence            4677889888887731   11122211       12233455555554    321 2346777766 9999999999999


Q ss_pred             CCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCC--CCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHH
Q 014936          122 RPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPD--KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK  197 (415)
Q Consensus       122 ~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~  197 (415)
                      .+|+++++...+.++  +.+.++..|+ +..+..++.  .+..++++.++  ++++++.|.+++..+.||+..+      
T Consensus        78 ~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~------  148 (349)
T TIGR01364        78 AEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR------  148 (349)
T ss_pred             CCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc------
Confidence            899998887766654  4567788898 766664322  22245666555  3457889999999999999865      


Q ss_pred             HHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH--
Q 014936          198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM--  275 (415)
Q Consensus       198 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~--  275 (415)
                        ++++.+++++++|.+++.    +..+..+..++     ++++|.+|.|+.+|  +|+++.+++        .++++  
T Consensus       149 --~l~~~~~~l~iVDavss~----g~~~id~~~~d-----~~~~ssqK~lgP~G--lg~l~~s~~--------~~~~~~~  207 (349)
T TIGR01364       149 --ELPDVKNAPLVADMSSNI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTVVIVRKD--------LLGRASR  207 (349)
T ss_pred             --eecccCCCeEEEEccccc----cCccCCHHHcc-----EEEEecccccCCCc--eEEEEECHH--------HHhhccc
Confidence              555577999999999987    33334444332     77888899998777  888887652        22221  


Q ss_pred             --------H---hhccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC-C--CCceE
Q 014936          276 --------K---KYFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHK-P--EGSMA  340 (415)
Q Consensus       276 --------~---~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p--~~g~~  340 (415)
                              .   ......++++.....++.++|+...+. .++.+.++.+++.+++.+.|++++++..... |  ..+..
T Consensus       208 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v  287 (349)
T TIGR01364       208 ITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMN  287 (349)
T ss_pred             CCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeE
Confidence                    1   111223577777778888888765455 5899999999999999999999976642311 1  12233


Q ss_pred             EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      +.+.++..     ....++.. .+.+.|+++.+|..  ..+.+|+|+.  .+.+|++.+++.|+++.++
T Consensus       288 ~sf~~~~~-----~~~~~~~~-~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~  348 (349)
T TIGR01364       288 VVFTLGNE-----ELEKRFLK-EAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK  348 (349)
T ss_pred             EEEecCCh-----hHhHHHHH-HHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence            44444421     11234434 44668997766654  3478999994  6799999999999987664

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.86  E-value=7.8e-19  Score=166.35  Aligned_cols=339  Identities=16%  Similarity=0.114  Sum_probs=207.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .|+.++||..|.-.... --.+|.+.+++++++..... ..|..    .+.+..+|+.+.+..+  -..+.++++++|++
T Consensus        73 dG~~ylD~~~g~~~~~l-Gh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~~SGsE  145 (442)
T TIGR03372        73 QGNEFIDCLGGFGIFNV-GHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALTP--GKLKYSFFCNSGTE  145 (442)
T ss_pred             CCCEEEECCccHHhhhc-CCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCchH
Confidence            47889999777311111 12479999999998875322 12222    2344445555543222  12368999999999


Q ss_pred             HHHHHHHHhcC----CC-CEEEEcCCCCcchHHHHHhCCCeEE----EeeccCCCC--CCCChhHHHhhcC-----CCce
Q 014936          112 AIDVAMALLSR----PG-ANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKG--WEVDLDDIESLAD-----QNTV  175 (415)
Q Consensus       112 al~~~~~~l~~----~g-d~vi~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~--~~~~~~~l~~~~~-----~~~~  175 (415)
                      |++.+++....    .| .+|+....+|++....+........    ..|..+.-.  .-.|.+.+++.++     ....
T Consensus       146 A~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~v  225 (442)
T TIGR03372       146 SVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDV  225 (442)
T ss_pred             HHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcE
Confidence            99999987542    23 5799999999987655543321110    011100000  0125666666553     1345


Q ss_pred             EEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-c
Q 014936          176 ALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-W  252 (415)
Q Consensus       176 ~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~  252 (415)
                      +.++..| ....|.. .|.+.++++.++|++||+++|+||++.++...|.. .....++..+.++   +++|.++ .| +
T Consensus       226 AavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PDiv---t~gK~lg-~G~~  300 (442)
T TIGR03372       226 AAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPDIL---CLAKALG-GGVM  300 (442)
T ss_pred             EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCCee---eehhhhc-CCcc
Confidence            6667777 4556765 57888999999999999999999999876555542 1222233222233   5899964 57 6


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----  325 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----  325 (415)
                      ++|.+++++        ++.+.+...   ...+++.++++.+++.+.|+...++   +..++.++.-+++.+.|++    
T Consensus       301 Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~  369 (442)
T TIGR03372       301 PIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAE  369 (442)
T ss_pred             cceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHh
Confidence            899999865        566666321   2234567899999888888653222   2334444445555555543    


Q ss_pred             CC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHH
Q 014936          326 IP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIK  402 (415)
Q Consensus       326 ~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~  402 (415)
                      .| .+.  .....|+++.+.+...     .....+...+ .++||.+.+...  ..+.+|+.+.  .+++++++++++|.
T Consensus       370 ~~~~i~--~vRG~Gl~~giel~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~  439 (442)
T TIGR03372       370 YPDLII--EARGKGLLMAIEFRDN-----EIGYAFAKEL-FQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAK  439 (442)
T ss_pred             CCCceE--EEecceEEEEEEeCCh-----HHHHHHHHHH-HHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHH
Confidence            44 222  1345678888777531     1134455555 567999875321  1368999884  79999999999998


Q ss_pred             HH
Q 014936          403 SF  404 (415)
Q Consensus       403 ~~  404 (415)
                      ++
T Consensus       440 ~~  441 (442)
T TIGR03372       440 DA  441 (442)
T ss_pred             Hh
Confidence            75

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.85  E-value=2.6e-18  Score=159.80  Aligned_cols=280  Identities=15%  Similarity=0.113  Sum_probs=184.7

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~  152 (415)
                      +...+|++.++++.        ..+..+++++|++|+.+++.++.++||+|+++.+.|....    ..+...|+++..++
T Consensus        64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd  135 (384)
T PRK06434         64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID  135 (384)
T ss_pred             hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence            45678888898887        3467889999999999999999999999999988777654    45667899999988


Q ss_pred             ccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936          153 LLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF  231 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  231 (415)
                      .++.+.+.         +++ ++++|++.+|+||++.+   .++++|+++|++++  +++|.+++... .+   .++. .
T Consensus       136 ~~~~~~~~---------l~~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~-~~---~pl~-~  196 (384)
T PRK06434        136 TDRLNSLD---------FDPSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPY-NQ---NPLD-L  196 (384)
T ss_pred             CCChhhee---------ecCCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcc-cC---Cchh-c
Confidence            64322222         223 68899999999999988   67888888998998  46699975321 11   1222 2


Q ss_pred             CCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHH
Q 014936          232 GSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTL  309 (415)
Q Consensus       232 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  309 (415)
                      +.+   +++.|.+|.++.+| .=.|.+++++       +++.++++... ......++...+.+..-|+.     ++.+.
T Consensus       197 gaD---ivv~S~tK~i~G~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t-----L~~R~  261 (384)
T PRK06434        197 GAD---VVIHSATKYISGHSDVVMGVAGTNN-------KSIFNNLVERRKTLGSNPDPIQAYLALRGLKT-----LGLRM  261 (384)
T ss_pred             CCC---EEEeecccccCCCCCceEEEEecCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc-----HHHHH
Confidence            333   88889999976655 3345555533       24666665443 33344566555555555554     78888


Q ss_pred             HHHHHHHHHHHHHhhcCCCCcCCCCCC----------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC--
Q 014936          310 NLLKQSVDICYNKIKEIPCISCPHKPE----------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV--  377 (415)
Q Consensus       310 ~~~~~~~~~l~~~l~~~~~~~~~~~p~----------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--  377 (415)
                      ++.+++...+.+.|+..|.+..+.+|.          .|..+.++++.     .....+++..+ +--.+.++-|...  
T Consensus       262 ~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~-----~~~~~~f~~~l-~l~~~~~slG~~~sl  335 (384)
T PRK06434        262 EKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS-----MEDVHKFIRNL-EIPMVAASLGGVESL  335 (384)
T ss_pred             HHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC-----HHHHHHHHHhC-CcceEccCCCCCCee
Confidence            899999999999999988876565664          24455555641     01122333322 2122233333311  


Q ss_pred             --------------------CC-CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          378 --------------------GL-KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       378 --------------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                                          +. ++-||+|++..  +.+.+++.|.+++.
T Consensus       336 ~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlE--d~~dLi~dl~~Al~  383 (384)
T PRK06434        336 ITLPVETSHSSLSPEERERLGISDNLVRFSIGIE--DIDDLIKDIENALS  383 (384)
T ss_pred             eECCCccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHhc
Confidence                                00 35799999874  56666777766654

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.85  E-value=6.5e-18  Score=161.08  Aligned_cols=349  Identities=18%  Similarity=0.127  Sum_probs=209.8

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++|+..|.-.... --.+|.+.+++++++......  ....-..+....+|+.+.+..+. -..+.++++++|++
T Consensus        51 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsE  126 (441)
T PRK05769         51 VDGNVYLDFNAGIAVTNV-GHAHPKVVKAVKEQAEKFLHY--SLTDFYYEPAVELAERLVEIAPG-GFEKKVFFTNSGTE  126 (441)
T ss_pred             CCCCEEEECCCchhhccc-CCCCHHHHHHHHHHHHhccCc--cCcccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence            347788999887532221 124688999999998753321  11101123445556655442220 01369999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCC--CC-C--------Chh
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE-V--------DLD  164 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~--------~~~  164 (415)
                      |++.+++...  ....+|+....+|++....+... +.             .+..++......  +. -        +++
T Consensus       127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (441)
T PRK05769        127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD  206 (441)
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence            9999998754  12257888899998876554332 11             112222110000  00 0        123


Q ss_pred             HHHh-hc----CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCe
Q 014936          165 DIES-LA----DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI  237 (415)
Q Consensus       165 ~l~~-~~----~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  237 (415)
                      .+++ .+    .....+.++..| ....|.. .+.+.+++|.++|+++|+++|.||++.++...|... ....++..+.+
T Consensus       207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDi  285 (441)
T PRK05769        207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDI  285 (441)
T ss_pred             HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCE
Confidence            3554 22    234456677777 4556764 568889999999999999999999999866555422 12223322233


Q ss_pred             EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD  317 (415)
Q Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  317 (415)
                      +   +++|.++ .|+++|++++++        ++.+........+...+++++.++.+.|+...+    +..++++++.+
T Consensus       286 v---t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~  349 (441)
T PRK05769        286 I---TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLEELEE----GLLENAQKLGE  349 (441)
T ss_pred             E---EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence            3   5789976 689999999865        444332222223456688999998888865321    45566667777


Q ss_pred             HHHHHhhcC----CCCcCCCCCCCceEEEEecCcccc-CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CC
Q 014936          318 ICYNKIKEI----PCISCPHKPEGSMAVMLKLNLSLL-DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VD  390 (415)
Q Consensus       318 ~l~~~l~~~----~~~~~~~~p~~g~~~~~~l~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~  390 (415)
                      +|.+.|+++    +.+.  ....-|.++-+.+..... +.......+...+ .++||.+.+..    ...+|+++.  ++
T Consensus       350 ~l~~~L~~l~~~~~~~~--~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~Gil~~~~~----~~~lr~~p~l~~t  422 (441)
T PRK05769        350 YLRKELKELKEKYEFIG--DVRGLGLMIGVELVKDRKEPDPKLRDKVLYEA-FKRGLLLLGAG----KSAIRIIPPLIIT  422 (441)
T ss_pred             HHHHHHHHHHHhCCCee--eeecceEEEEEEeccCCccccHHHHHHHHHHH-HhCCcEEecCC----CCEEEEeCCCCCC
Confidence            777777643    2221  123446666666632110 0000122344444 56799987642    367999985  59


Q ss_pred             hhhHHHHHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       391 ~~~l~~~l~~l~~~~~~~  408 (415)
                      ++++++++++|.+++.+.
T Consensus       423 ~~~id~~~~~l~~~l~~~  440 (441)
T PRK05769        423 EEEADIGLEILEEAIKEL  440 (441)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999998753

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.85  E-value=4e-19  Score=166.95  Aligned_cols=323  Identities=17%  Similarity=0.139  Sum_probs=203.2

Q ss_pred             eEecccCCCCCCCCCCcHH-HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCC-CCCcEEEeC-ChHHHHH
Q 014936           38 ISLAMGDPTVHSCFHTTHV-ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTS-GCTQAID  114 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~-~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i~~-g~~~al~  114 (415)
                      ++|..|-      ..+++. +++++.+......+....-..-+.+.|+.+++++      +. ++++|++++ |+|.+++
T Consensus        14 ~~f~~Gp------~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~~~~gs~T~~~~   81 (378)
T PRK03080         14 PRFSSGP------CKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELL------SLPEGYEVGIVPGSDTGAWE   81 (378)
T ss_pred             CCcCCCC------cCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchHHHHH
Confidence            4565553      344566 9998876543211111111234567777777777      33 345788775 8999999


Q ss_pred             HHHHHhcCC-CCEEEEcCCCCcc-hHH-HHHhCCC-eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936          115 VAMALLSRP-GANILLPRPGFPI-YEL-SAAFRHI-EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY  190 (415)
Q Consensus       115 ~~~~~l~~~-gd~vi~~~p~y~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  190 (415)
                      +++..+.++ ++.|++ .-.|+. +.. ..+..|. ++..++.+  .+..+|+++++.     ++.|.+++.+|.||...
T Consensus        82 ~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~tG~~~  153 (378)
T PRK03080         82 MALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTTGVRV  153 (378)
T ss_pred             HHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCccceec
Confidence            999999874 445554 445544 222 2356788 88888764  334567766432     55688999999999997


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChH
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~  269 (415)
                      |   +++|++  +++|+++++|.+++.+.    .+..+...  +   +++.|.+|+++. +|  +|+++.++        
T Consensus       154 p---i~~I~~--~~~g~~~vVDa~qs~G~----~pidv~~i--D---~~~~s~~K~l~~P~G--~g~l~v~~--------  209 (378)
T PRK03080        154 P---VARWIG--ADREGLTICDATSAAFA----LPLDWSKL--D---VYTFSWQKVLGGEGG--HGMAILSP--------  209 (378)
T ss_pred             c---chhhcc--ccCCCeEEEeccccccc----CCCCHHHC--c---EEEEehhhhCCCCCc--eEEEEECH--------
Confidence            7   555555  68899999999999833    33344432  2   778889998754 66  88888864        


Q ss_pred             HHHHHHHhh------------------------ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhh
Q 014936          270 KVVERMKKY------------------------FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       270 ~~~~~~~~~------------------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      +..+++...                        .....+++.....++.++|+...+. .++.+.++.+++.+++.+.|+
T Consensus       210 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~  289 (378)
T PRK03080        210 RAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAE  289 (378)
T ss_pred             HHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence            233322210                        0011234444444445555543333 578888999999999999999


Q ss_pred             cCCCCcCCCC-CC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHH
Q 014936          325 EIPCISCPHK-PE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLD  399 (415)
Q Consensus       325 ~~~~~~~~~~-p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~  399 (415)
                      +++++..+.. +.  .+..+.+.++... . . ...++...+++ +||.+..|......+.+|+|+.  ++.++++.+++
T Consensus       290 ~~~~~~~~~~~~~~~s~~i~~~~~~~~~-~-~-~~~~~~~~l~~-~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~  365 (378)
T PRK03080        290 KTPWATPLVADPATRSNTSVTLDFVDAQ-A-A-VDAAAVAKLLR-ENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTP  365 (378)
T ss_pred             hCCCcccccCCccccCccEEEEEcCCch-H-H-HHHHHHHHHHH-cCCeeccccccCCCCcEEEecCCCCCHHHHHHHHH
Confidence            8866653311 21  2234444554200 0 0 13345666655 4888877654323578999994  68999999999


Q ss_pred             HHHHHHHHH
Q 014936          400 RIKSFYQRH  408 (415)
Q Consensus       400 ~l~~~~~~~  408 (415)
                      .|++++++.
T Consensus       366 al~~~~~~~  374 (378)
T PRK03080        366 WLDWAFERL  374 (378)
T ss_pred             HHHHHHHHH
Confidence            999987654

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.85  E-value=2.9e-18  Score=173.86  Aligned_cols=301  Identities=11%  Similarity=0.060  Sum_probs=210.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCChH----HHHHHHHHHhcCC-CC----EEEEcCCCCcchHHHHHhCCCeEEE
Q 014936           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT----QAIDVAMALLSRP-GA----NILLPRPGFPIYELSAAFRHIEVRH  150 (415)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~----~al~~~~~~l~~~-gd----~vi~~~p~y~~~~~~~~~~g~~~~~  150 (415)
                      .++|+.+++++    |    .++|.++++++    +++.++++++.++ ||    .|+++...|......+...|++++.
T Consensus       571 ~~~r~~la~i~----g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~  642 (993)
T PLN02414        571 EDLGDLLCEIT----G----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV  642 (993)
T ss_pred             HHHHHHHHHHh----C----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence            45666666665    3    39999999999    8999999999866 88    8999999999988888889999999


Q ss_pred             eeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          151 FDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       151 ~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      ++.+.  +..+|+++|++++++   ++++|++++|+|-+|..   +++++|+++|+++|+.+++|.++.....   ....
T Consensus       643 v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgAq~~a~~---~l~~  714 (993)
T PLN02414        643 VGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGANMNAQV---GLTS  714 (993)
T ss_pred             eccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEecCHHhcc---CcCC
Confidence            99853  346999999999984   67899999999999998   7799999999999999999999965221   1122


Q ss_pred             ccccCCCCCeEEEccCccccC----CCCceEEEEEeeCCCCCCChHHHHHHHH------------hhccc-cCC------
Q 014936          228 MGVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTTDPCGMFRKPKVVERMK------------KYFDI-LGD------  284 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~------  284 (415)
                      ...++.+   ++.+|.+|+|+    .+|..+|++.+.+.        +...+-            ..... .++      
T Consensus       715 p~~~GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--------L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~  783 (993)
T PLN02414        715 PGFIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKH--------LAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPW  783 (993)
T ss_pred             ccccCCC---EEEecCCccCCcCcccCCCCeeeEEEchh--------hcccCCCCccccCCCcccccCCCCcCCccchhh
Confidence            3345554   88889999765    23556999987541        111110            00100 112      


Q ss_pred             chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce--EEEEecCccccCCCCCHHHHHHH
Q 014936          285 PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM--AVMLKLNLSLLDDIIDDIDFCFK  362 (415)
Q Consensus       285 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~--~~~~~l~~~~~~~~~~~~~~~~~  362 (415)
                      .+.....++..++.....+.+.+..++...+.+++.+.|++..++. +..|.+..  -+.+.+...+-....+..++.++
T Consensus       784 g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~-~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~kr  862 (993)
T PLN02414        784 GSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL-FRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKR  862 (993)
T ss_pred             hhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCeeeeEEEeccccccccCCCHHHHHHH
Confidence            1223334445555555567888889999999999999998743444 32333321  12233331110001245777777


Q ss_pred             HHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936          363 LAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       363 ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      |+ ++||.... ..|...+++||++  ..++++||.+++.+..+.++...
T Consensus       863 L~-d~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~  910 (993)
T PLN02414        863 LM-DYGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD  910 (993)
T ss_pred             HH-HcCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence            76 78997543 3244478999999  47899999999999988877654

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.85  E-value=2.6e-20  Score=162.27  Aligned_cols=290  Identities=18%  Similarity=0.204  Sum_probs=185.8

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC------CCEEEEcCCCCcchHHHHHhCCCeEEEe
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP------GANILLPRPGFPIYELSAAFRHIEVRHF  151 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~------gd~vi~~~p~y~~~~~~~~~~g~~~~~~  151 (415)
                      -.++|.+.|.+.....-+..++...|++.+|+|+.+++++.+|...      --.|+...|.|+.|......+.-....+
T Consensus        44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w  123 (363)
T PF04864_consen   44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW  123 (363)
T ss_dssp             S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred             ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence            3578999998887654454556678999999999999999999632      1489999999999988775554433333


Q ss_pred             eccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936          152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF  231 (415)
Q Consensus       152 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  231 (415)
                      .-+        ...+...-.+.+-.=++++||||-|.+     .+.++   +..+..+|.|-+|.+-.|+     ++..-
T Consensus       124 ~Gd--------a~~~~~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyT-----pI~~~  182 (363)
T PF04864_consen  124 AGD--------ASNFKNSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYT-----PITAP  182 (363)
T ss_dssp             EEE--------CCCGTT-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S-
T ss_pred             ccc--------HHhhccCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeeccccc-----ccCCC
Confidence            321        111111111233444899999999988     45554   3556778999999985544     22221


Q ss_pred             CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc----H----
Q 014936          232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD----E----  302 (415)
Q Consensus       232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~----~----  302 (415)
                        .++.|.++|+||.-|.+|.|+||.++.+       .++.+++..+.. .+.+++.-+|.-++++|+...    .    
T Consensus       183 --aD~DiMLFT~SK~TGHAGSR~GWAlVKD-------~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~  253 (363)
T PF04864_consen  183 --ADHDIMLFTLSKLTGHAGSRFGWALVKD-------EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGT  253 (363)
T ss_dssp             --B--SEEEEEHHHHCS-GGG-EEEEEES--------HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTT
T ss_pred             --CCCceEEEEEecccCccccccceeeecC-------HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCc
Confidence              1223899999999899999999999976       468888877743 356778888877777765421    1    


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHhhcCCCCcC--C----------CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCe
Q 014936          303 -VFFKKTLNLLKQSVDICYNKIKEIPCISC--P----------HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV  369 (415)
Q Consensus       303 -~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~----------~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi  369 (415)
                       +.++--.+.++++.+.|.+.+....-+..  .          .......|.|++++..       +.+-|...|++.||
T Consensus       254 ~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-------ed~DC~~~l~~~~I  326 (363)
T PF04864_consen  254 EDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-------EDEDCYAVLREAKI  326 (363)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-------GGSSHHHHHHCTTE
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-------ccccHHHHHHhCCc
Confidence             36677788999999999999986311110  0          0112356999999742       22346677789999


Q ss_pred             EEEcCCCCCC-CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          370 IILPGTAVGL-KNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       370 ~v~~g~~~~~-~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                      ..+.|..|+. +.++|+|+-.++++++.++++|..+
T Consensus       327 ~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l  362 (363)
T PF04864_consen  327 ITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL  362 (363)
T ss_dssp             EEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred             ccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence            9999999997 6899999999999999999999754

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.85  E-value=1.9e-18  Score=162.07  Aligned_cols=305  Identities=13%  Similarity=0.167  Sum_probs=198.8

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH-HHHHHHHHHhcC---CCCEEEEcCCCCcchHHHHHhCCCeEEEeec-
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT-QAIDVAMALLSR---PGANILLPRPGFPIYELSAAFRHIEVRHFDL-  153 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~-~al~~~~~~l~~---~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~-  153 (415)
                      ...+.+.+.+.+.+..|.. +.+..++++|+| .++.+++.++..   +||.|+++..+|.+....+...|++++.++. 
T Consensus       103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~  181 (444)
T TIGR03531       103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV  181 (444)
T ss_pred             HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence            3455555555555544522 124688888888 688888877752   5899999999999999999999999999985 


Q ss_pred             cCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc--
Q 014936          154 LPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM--  228 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--  228 (415)
                      ..++.+.+|+++|++++++   +.+++++.+|+  |+.....+++++|+++|++||+++|+|++|+.....   ...+  
T Consensus       182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~---~~~~~~  256 (444)
T TIGR03531       182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK---YMELIN  256 (444)
T ss_pred             ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh---hhhhhh
Confidence            2346688999999999976   44566666665  444444599999999999999999999999863211   0011  


Q ss_pred             cccCCCCCeEEEccCccccCCCCceEEEEE-eeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFV-TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKK  307 (415)
Q Consensus       229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  307 (415)
                      .......-.+++.|++|.+.++|+  |+++ +++       +++.+.+..... ....+...+.+...++. ...+.+++
T Consensus       257 ~g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d-------~el~~~i~~~y~-g~~~~s~~~~~~~~ll~-~G~~g~~~  325 (444)
T TIGR03531       257 KAIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFD-------ENFIQEISKSYP-GRASASPSLDVLITLLS-LGSKGYLE  325 (444)
T ss_pred             ccccccCCCeEEEeCccCCCCCCC--EEEEEECC-------HHHHHHHHHhcc-CCCCChHHHHHHHHHHH-hCHHHHHH
Confidence            011100013667799999888775  6655 533       357777765432 22234456666666664 34578899


Q ss_pred             HHHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeE----EEcCC-----
Q 014936          308 TLNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVI----ILPGT-----  375 (415)
Q Consensus       308 ~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~----v~~g~-----  375 (415)
                      +.++..++++++.+.|+++.   |-.....|....-+-+.+....   ..+... +-.+|...+|.    |.||.     
T Consensus       326 li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~---~~~~~~-~g~~l~~~~v~g~r~v~~~~~~~~~  401 (444)
T TIGR03531       326 LLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK---GKDPTM-LGSMLYSRRVTGPRVVTNGDSKTVG  401 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc---ccCHHH-HHHHHHhCCCCCceeecCCCceEEC
Confidence            99999999999999988642   3332223444444444444211   112333 44455555552    34555     


Q ss_pred             --CC---CC------CCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936          376 --AV---GL------KNWLRVTF--AVDPYSLEECLDRIKSF  404 (415)
Q Consensus       376 --~~---~~------~~~iRi~~--~~~~~~l~~~l~~l~~~  404 (415)
                        .|   +.      ..|+-++.  +.+++|++.++++|.+.
T Consensus       402 ~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~  443 (444)
T TIGR03531       402 GCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS  443 (444)
T ss_pred             CEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence              22   11      13565555  57899999999999865

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK02769 histidine decarboxylase; Provisional

Probab=99.85  E-value=6.5e-18  Score=157.28  Aligned_cols=289  Identities=14%  Similarity=0.116  Sum_probs=199.9

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCc--EEEeCChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~--i~i~~g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~  154 (415)
                      ..++++.+.+++.+.+|.  ++++  .++|+|+|+++..++....  .+++.|++++-.|++....++..|.+...++.+
T Consensus        63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~  140 (380)
T PRK02769         63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL  140 (380)
T ss_pred             hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence            356666666666666663  3344  4889999999887765542  467899999999999999999999998888875


Q ss_pred             CCCCCCCChhHHHhhcCCC---ceEEEecCCCCccccCCCHHHHHHHHHHHhhcC---cEEEEccccCCcccCCC-Cccc
Q 014936          155 PDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLK---TLVIADEVYGHLVFGDK-PFVP  227 (415)
Q Consensus       155 ~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~---~~li~De~~~~~~~~~~-~~~~  227 (415)
                      +  ++.+|+++|+++++++   +.+|+++.++|+||.+   +++++|+++|+++|   +++++|.+++.+...-. ...+
T Consensus       141 ~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~  215 (380)
T PRK02769        141 P--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP  215 (380)
T ss_pred             C--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccCcccc
Confidence            4  4569999999998775   8889999999999999   66888888899998   69999999998653211 1011


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCC
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQ  299 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~  299 (415)
                      +. +.. .-..+..|.+|.++ ....+|.++.++        +..+.+...        ....++.+.....++...|+.
T Consensus       216 ~d-~~~-~vDsis~s~HK~~~-~P~g~G~l~~r~--------~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~  284 (380)
T PRK02769        216 FS-FAD-GIDSIAISGHKFIG-SPMPCGIVLAKK--------KYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS  284 (380)
T ss_pred             CC-ccC-CCCEEEECCcccCC-CCCCcEEEEEeh--------hhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH
Confidence            11 111 11255668999854 334589988875        233332110        011233344455556666665


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC
Q 014936          300 PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL  379 (415)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~  379 (415)
                      ...+.+++..++..++++++.+.|++. +++.+..|. .+.+.++.+        ++ ++    .  .|..+.+-     
T Consensus       285 lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~-~~~v~f~~~--------~~-~~----~--~~w~l~~~-----  342 (380)
T PRK02769        285 LGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPN-SITVVFPCP--------SE-RI----W--KKWHLATS-----  342 (380)
T ss_pred             HCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCC-ceEEEEcCC--------CH-HH----H--hCeeEccc-----
Confidence            556788999999999999999999886 777565565 344443332        11 22    1  35555443     


Q ss_pred             CCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          380 KNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       380 ~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ..++|+.+  ..+++.+++.++.|......
T Consensus       343 ~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~  372 (380)
T PRK02769        343 GNQAHIITMPHHNKQQIDSLIDELIFDLKN  372 (380)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence            25899999  36788999999998877664

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.84  E-value=6.3e-18  Score=162.85  Aligned_cols=354  Identities=16%  Similarity=0.109  Sum_probs=213.2

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++||..|.-....+ -.+|.+.+++++++...... .....+..+....+++.+.+... +..-+.++++++|++
T Consensus        86 ~dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~~-~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsE  162 (504)
T PLN02760         86 INGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPFY-HSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSE  162 (504)
T ss_pred             CCCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccce-ecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHH
Confidence            3588999998874222222 35799999999998753221 01001223445555555543221 122357999999999


Q ss_pred             HHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHh-CCCe------------EEEeeccCCCCCC----------
Q 014936          112 AIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDKGWE----------  160 (415)
Q Consensus       112 al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~-~g~~------------~~~~~~~~~~~~~----------  160 (415)
                      |++.+++...       .++ .+|+....+|++....+.. .|..            +..++.  .+.+.          
T Consensus       163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~  240 (504)
T PLN02760        163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDC--PHYWRFHLPGETEEE  240 (504)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCC--CcccccCCCCCcHHH
Confidence            9999999873       123 5788888888876543322 2211            111111  01010          


Q ss_pred             ---CChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          161 ---VDLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       161 ---~~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                         ...+++++.+.   +...+.++..| ....|.+ .|.+.+++|.++|++||+++|.||++.++...|.... ...++
T Consensus       241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~g  319 (504)
T PLN02760        241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYN  319 (504)
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcC
Confidence               01234555552   23456677777 4455665 5788899999999999999999999987765555322 22233


Q ss_pred             CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVF  304 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~  304 (415)
                      ..+.   +.+++|.++.+.+++|.+++++        ++.+.+...        ...+++.+|++.+++.+.|+...+  
T Consensus       320 v~PD---ivtlgK~lggG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~--  386 (504)
T PLN02760        320 IKPD---LVSLAKALSSAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE--  386 (504)
T ss_pred             CCCc---EEEecccccCCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh--
Confidence            2222   3478999644336899998865        677766431        223566789999999888865322  


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCccccC-C-CCC----HHHHHHHHHhhcCeEEEcCCCC
Q 014936          305 FKKTLNLLKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLLD-D-IID----DIDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~-~-~~~----~~~~~~~ll~~~gi~v~~g~~~  377 (415)
                       ++..++++++.+++.+.|+++....++ ....-|.++-+.+...... . ...    ...+... +.++||.+.+..  
T Consensus       387 -~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g--  462 (504)
T PLN02760        387 -RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAE-CKKRGMLVRVAG--  462 (504)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHH-HHhCCcEEEecC--
Confidence             134566666666666666554221111 1234466666666321110 0 000    2234444 456799997642  


Q ss_pred             CCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHHH
Q 014936          378 GLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       378 ~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                         ..+|+++.  ++++++++++++|.+++++...+
T Consensus       463 ---~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~~  495 (504)
T PLN02760        463 ---DNIMMSPPLIITPEEVDELISIYGKALKATEER  495 (504)
T ss_pred             ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence               56899974  89999999999999999876543

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.84  E-value=1e-17  Score=154.97  Aligned_cols=321  Identities=16%  Similarity=0.132  Sum_probs=214.8

Q ss_pred             HHHHHH-HHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCC
Q 014936           55 HVATEA-VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPG  133 (415)
Q Consensus        55 ~~~~~a-~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~  133 (415)
                      .++.++ +......+.  .|.....+.+|++.+++++        ..+.++.+++|+.|++++....++|||.|  +.++
T Consensus        50 ~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~  117 (450)
T TIGR02618        50 NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM  117 (450)
T ss_pred             HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence            556665 333333333  4777678899999999998        46689999999999998877778999977  6677


Q ss_pred             CcchHHH-HHhCCCeEEEeecc--------CCCCCCCChhHHHhhcCCC----ceEEEecCCCC-ccccCCCHHHHHHHH
Q 014936          134 FPIYELS-AAFRHIEVRHFDLL--------PDKGWEVDLDDIESLADQN----TVALVIINPGN-PCGNVYSYQHLQKLA  199 (415)
Q Consensus       134 y~~~~~~-~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~----~~~v~i~~p~n-ptG~~~~~~~l~~i~  199 (415)
                      |...... ....|+..+.++.+        ....+.+|+++|++++++.    ++++.+.+++| ..|.++|.++++++.
T Consensus       118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~  197 (450)
T TIGR02618       118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR  197 (450)
T ss_pred             eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence            7554444 67788865555332        1234678999999999763    34677888887 458999999999999


Q ss_pred             HHHhhcCcEEEEccccCCcc--cC-----CCCcccc-------cccCCCCCeEEEccCccccCCC-CceEEEEEeeCCCC
Q 014936          200 ETANKLKTLVIADEVYGHLV--FG-----DKPFVPM-------GVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCG  264 (415)
Q Consensus       200 ~~~~~~~~~li~De~~~~~~--~~-----~~~~~~~-------~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~  264 (415)
                      ++|++||+.+|+|.++....  +-     +....++       .++..    .+..|..|.++.+ |   |+++.++   
T Consensus       198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD----~~~~S~~Kd~~~~~G---G~l~~~d---  267 (450)
T TIGR02618       198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD----GCTMSGKKDCLVNIG---GFLCMND---  267 (450)
T ss_pred             HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc----EEEEeeccCCCCCCc---eEEEeCC---
Confidence            99999999999999997722  10     1111122       11211    4777889997666 4   5555554   


Q ss_pred             CCChHHHHHHHHhhccc-----c-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936          265 MFRKPKVVERMKKYFDI-----L-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS  338 (415)
Q Consensus       265 ~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  338 (415)
                          +++.++.+.....     + +..+.-.+.+++..|++..+   ....++...+.++|.+.|.+. |+.+ ..|.+|
T Consensus       268 ----~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~-Gvpv-~~p~gg  338 (450)
T TIGR02618       268 ----DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAA-GVPI-VEPVGG  338 (450)
T ss_pred             ----HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHC-CCcc-cCCCCc
Confidence                3677777666221     1 12233344555555554221   133344445677888888888 8884 478889


Q ss_pred             eEEEEecCc----cccCCCCCHHHHHHHHHhhcCeEE-EcCCCC-CC-----------CCeEEEEee---CChhhHHHHH
Q 014936          339 MAVMLKLNL----SLLDDIIDDIDFCFKLAKEESVII-LPGTAV-GL-----------KNWLRVTFA---VDPYSLEECL  398 (415)
Q Consensus       339 ~~~~~~l~~----~~~~~~~~~~~~~~~ll~~~gi~v-~~g~~~-~~-----------~~~iRi~~~---~~~~~l~~~l  398 (415)
                      +.++++...    -+... .....+..+|-.+.||-. .-|+.. +.           -.-+|+++.   .+.+.++...
T Consensus       339 h~V~vda~~~lph~~~~~-~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~  417 (450)
T TIGR02618       339 HAVFLDARRFLPHIPQDQ-FPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVA  417 (450)
T ss_pred             ceEEEEhHHhCCCCChhh-ChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHH
Confidence            988886532    11111 136677778877888853 334432 11           146999993   5889999999


Q ss_pred             HHHHHHHHH
Q 014936          399 DRIKSFYQR  407 (415)
Q Consensus       399 ~~l~~~~~~  407 (415)
                      ++|..+.++
T Consensus       418 ~~~~~~~~~  426 (450)
T TIGR02618       418 DGIIKLYKH  426 (450)
T ss_pred             HHHHHHHhh
Confidence            999988775

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.84  E-value=1.1e-17  Score=159.75  Aligned_cols=351  Identities=14%  Similarity=0.091  Sum_probs=208.0

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~  110 (415)
                      .+|+.++||..|.-....+. .+|.+.+++++++.........  ....+....+++.+.+..+  .. .+.++++++|+
T Consensus        39 ~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~~v~f~~SGs  113 (445)
T PRK08593         39 VDGKTYIDLLASASSQNVGH-APPRVVEAIKAQADKFIHYTPA--YMYHEPLVRLAKKLCELAP--GDFEKRVTFGLSGS  113 (445)
T ss_pred             CCCCEEEECCccHHhhcCCC-CCHHHHHHHHHHHHhccCcccc--ccCCHHHHHHHHHHHHhCC--CCCCCEEEECCchH
Confidence            35888999977742211111 4799999999998754321110  0112333444444443222  12 25899999999


Q ss_pred             HHHHHHHHHhc-CCC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCC--CC-CC-------hh
Q 014936          111 QAIDVAMALLS-RPG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE-VD-------LD  164 (415)
Q Consensus       111 ~al~~~~~~l~-~~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~~-------~~  164 (415)
                      +|++.+++... -.| .+|+....+|++....+... +.             .+..++......  +. .+       ++
T Consensus       114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  193 (445)
T PRK08593        114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA  193 (445)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence            99999998643 122 46888888888865544321 11             122222211000  00 01       23


Q ss_pred             HHHhhcC----CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936          165 DIESLAD----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (415)
Q Consensus       165 ~l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  238 (415)
                      .+++.++    ....+.+|..| .+..|.+ .|.+.+++|.++|++||+++|.||++.++...|... ....++..+.  
T Consensus       194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pD--  270 (445)
T PRK08593        194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPD--  270 (445)
T ss_pred             HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCC--
Confidence            3444332    23345566666 6667776 789999999999999999999999998776555421 1122222222  


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD  317 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  317 (415)
                       +.+++|.++ .|+++|++++++        ++.+.+... ...+...+++++.++.+.|+...++   +..++.+++-+
T Consensus       271 -i~t~gK~l~-~G~p~gav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~  337 (445)
T PRK08593        271 -LMSFGKSLA-GGMPMSAIVGRK--------EIMESLEAPAHLFTTGANPVSCAAALATIDMIEDE---SLLQRSAEKGE  337 (445)
T ss_pred             -Eeeeccccc-CCcccEEEEEcH--------HHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHH
Confidence             337899964 679999999865        677766432 2235667888888888888653222   23344444444


Q ss_pred             HHHHHhh----cCCCCcCCCCCCCceEEEEecCccccCCCCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--e
Q 014936          318 ICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLLDDIID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--A  388 (415)
Q Consensus       318 ~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~  388 (415)
                      ++.+.|+    +.|.+. . ...-|+++.+.+.........+   ...+...+ .++||.+.+..    .+.+|+.+  .
T Consensus       338 ~l~~~L~~l~~~~~~v~-~-vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~~----~~~lr~~p~l~  410 (445)
T PRK08593        338 YARKRFDQWVSKYNFVG-D-VRGYGLSIGIDIVSDKKLKTRDNEAALKICNYC-FEHGVVIIAVA----GNVLRFQPPLV  410 (445)
T ss_pred             HHHHHHHHHHhcCCcEE-E-EeccceEEEEEEecCCCcCCCcHHHHHHHHHHH-HHCCeEEeccC----CCEEEEECCCc
Confidence            4555444    343332 1 3445666655553211000011   23444444 56799986632    36799988  4


Q ss_pred             CChhhHHHHHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      +++++++.+++++.++++++..
T Consensus       411 ~t~~~id~~~~~l~~~l~~~~~  432 (445)
T PRK08593        411 ITYEQLDTALNTIEQAFTALEA  432 (445)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhc
Confidence            7899999999999999987543

>PRK07046 aminotransferase; Validated

Probab=99.84  E-value=5.3e-18  Score=161.76  Aligned_cols=343  Identities=16%  Similarity=0.097  Sum_probs=204.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .++.++||..|.-.... --.+|.+.+++++++.......++.     +....+|+.+.+..    ..+.+.++++|++|
T Consensus        73 DG~~yiD~~~g~g~~~l-Gh~~p~i~~Av~~q~~~~~~~~~~~-----~~~~~lAe~l~~~~----~~~~v~F~nSGtEA  142 (453)
T PRK07046         73 DGHRYDDFCLGDTGAMF-GHSPAPVARALAEQARRGLTTMLPS-----EDAAWVGEELARRF----GLPYWQVATTATDA  142 (453)
T ss_pred             CCCEEEEeccccccccc-CCCCHHHHHHHHHHHHhCCCCCCCC-----HHHHHHHHHHHHHh----CCCEEEEECCHHHH
Confidence            47889999777522111 1247899999999988654333322     34444555554322    35799999999999


Q ss_pred             HHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC--CCeEE------Eee--cc---CCCCCCCChhHHHhhcCCCceEE
Q 014936          113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFR--HIEVR------HFD--LL---PDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       113 l~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~--g~~~~------~~~--~~---~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      ++.+++...  ..-++|+...-+|+++.......  +.+..      .++  ..   ..-.| .|++.+++.+.....+.
T Consensus       143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~vAa  221 (453)
T PRK07046        143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGDVAA  221 (453)
T ss_pred             HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCCeEE
Confidence            999998864  12368999999999875432210  00000      000  00   00011 27889998886555667


Q ss_pred             EecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936          178 VIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (415)
Q Consensus       178 ~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  255 (415)
                      +|..| ....|.+ .+.+.++++.++|+++|+++|.||++. +..+-.+..  ..++..+.++   +++|.+ ..|+++|
T Consensus       222 vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~--~~~gv~PDi~---t~gK~l-ggG~Pi~  294 (453)
T PRK07046        222 VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYT--RAHGLEPDFL---VVGKPI-AGGVPCA  294 (453)
T ss_pred             EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchh--HHhCCCccce---eehhhh-cCCCcce
Confidence            77788 3334544 567889999999999999999999997 322111111  1122222233   579995 5689999


Q ss_pred             EEEeeCCCCCCChHHHHHHHHhh----------ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhh
Q 014936          256 WFVTTDPCGMFRKPKVVERMKKY----------FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      .+++++        ++.+.+...          ...++..++++.+++.+.|+... ++.+++..+.-...++.+.+.+.
T Consensus       295 av~g~~--------~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~  366 (453)
T PRK07046        295 VYGFSA--------ELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIA  366 (453)
T ss_pred             eeeehH--------HHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            998865        677766521          12245678999888888876432 23333333333334444444344


Q ss_pred             cCCCCcCCCCCCCceEEEEecCccccCCC------CC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHH
Q 014936          325 EIPCISCPHKPEGSMAVMLKLNLSLLDDI------ID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLE  395 (415)
Q Consensus       325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~------~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~  395 (415)
                      +. ++. .....-|..+.+.+......+.      .+   ...+...+ .++||.+.|.     .+.++++..+++++++
T Consensus       367 ~~-~~~-~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~~~~~p~~t~~did  438 (453)
T PRK07046        367 RH-GLP-WHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYL-LNRGVLITPF-----HNMMLVCPATTAADVD  438 (453)
T ss_pred             hC-CCC-eEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHH-HHCCCEEecc-----cCcEEEeCCCCHHHHH
Confidence            44 222 1122223333443321110000      01   12334444 4579999873     2467888889999999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRHA  409 (415)
Q Consensus       396 ~~l~~l~~~~~~~~  409 (415)
                      ++++++.++++++.
T Consensus       439 ~~~~~~~~~l~~~~  452 (453)
T PRK07046        439 RLVAAFDACLGELL  452 (453)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999987653

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.83  E-value=7.5e-19  Score=148.47  Aligned_cols=327  Identities=13%  Similarity=0.108  Sum_probs=217.3

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV  103 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i  103 (415)
                      ...++++||+.++   +.++..+|++.++-.+++....        +.+|.+  -+..|+..||+|.        ..++.
T Consensus        64 G~~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh--------~rED~  130 (417)
T KOG1359|consen   64 GSDKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFH--------GREDT  130 (417)
T ss_pred             ccccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchH--HHHHHHHHHHHHh--------CCCce
Confidence            4467899999998   6678889999999988887421        123333  3567888999987        56788


Q ss_pred             EEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEe
Q 014936          104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVI  179 (415)
Q Consensus       104 ~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i  179 (415)
                      ++.+++-.|+..++.++..|.|.|+.+...|.++.+..+...    .+.       .+|+-.++..+.    .+-++|+-
T Consensus       131 ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLck----ry~-------h~dv~~l~~~l~~a~k~r~klv~T  199 (417)
T KOG1359|consen  131 ILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYR-------HVDVFDLEHCLISACKMRLKLVVT  199 (417)
T ss_pred             EEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh----hhc-------cchhHHHHHHHHHhhhheEEEEEe
Confidence            889999999999999999999999999999998887766543    111       145555554433    23344333


Q ss_pred             cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC-CCeEEEccCccccC-CCCceEEEE
Q 014936          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWI-VPGWRLGWF  257 (415)
Q Consensus       180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~-~~G~r~G~~  257 (415)
                      -..-..-|.+   .++++|++++++||.++++||+|+-+.++..+......++.. +..++.++++|++| +.|   ||.
T Consensus       200 Dg~FSMDGdi---aPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gyt  273 (417)
T KOG1359|consen  200 DGVFSMDGDI---APLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYT  273 (417)
T ss_pred             cceeccCCCc---ccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCc
Confidence            3335567777   567888888889999999999999888775555444444432 23488899999976 455   999


Q ss_pred             EeeCCCCCCChHHHHHHHHhhcc--c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          258 VTTDPCGMFRKPKVVERMKKYFD--I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      .+|+        .+++-++....  . +...+|.....+.+++.-.  -.-.+...+.+.+.+.+++.++.- |+.+. .
T Consensus       274 tgp~--------~li~llrqr~RpylFSnslppavV~~a~ka~dll--m~s~~~i~~~~a~~qrfr~~me~a-GftIs-g  341 (417)
T KOG1359|consen  274 TGPK--------PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLL--MVSSKEIQSRQANTQRFREFMEAA-GFTIS-G  341 (417)
T ss_pred             cCCh--------hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhc-Cceec-C
Confidence            9876        45665555421  1 2222322222222222211  113456677778888888888765 77732 2


Q ss_pred             CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      .. -....+-+...     ....+...++|+. ||.|..-+++..   ...||+.+  .+++|+++++++++.++.+.
T Consensus       342 ~~-hPI~pv~lGda-----~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~  412 (417)
T KOG1359|consen  342 AS-HPICPVMLGDA-----RLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF  412 (417)
T ss_pred             CC-CCccceecccH-----HHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence            11 12222223321     2356777788765 999987666554   34677777  37999999999999888764

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.83  E-value=7.6e-18  Score=161.09  Aligned_cols=345  Identities=13%  Similarity=0.062  Sum_probs=206.6

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---  105 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i---  105 (415)
                      ...++|-...      ...++.+++++...+.+....+|      +-...+.++++...+...+.++  ...+.+.+   
T Consensus        34 ~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~  105 (475)
T PLN03226         34 WKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQ  105 (475)
T ss_pred             HcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecC
Confidence            4567776665      45578899999888843221222      2223344554422222222222  23344433   


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH------HHHhCCCeEE----EeeccCCCCCCCChhHHHhhcCC-Cc
Q 014936          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL------SAAFRHIEVR----HFDLLPDKGWEVDLDDIESLADQ-NT  174 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~------~~~~~g~~~~----~~~~~~~~~~~~~~~~l~~~~~~-~~  174 (415)
                      .++|+.|+..++.+++++||+|+..+....++..      ..+..+....    .+.+++ .+..+|+++|++.+.. ++
T Consensus       106 ~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~p  184 (475)
T PLN03226        106 PLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRP  184 (475)
T ss_pred             cCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCC
Confidence            3778999999999999999999985532222211      1111222222    344544 3456899999998864 56


Q ss_pred             eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCce
Q 014936          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      ++|++ ..++ +|...   ++++|.++|+++|+++++|++|..+........ ++.   .  --++++|++|++.  |.+
T Consensus       185 klIv~-~~S~-~s~~~---D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~---~--~Div~~t~hK~L~--GP~  252 (475)
T PLN03226        185 KLIIA-GASA-YPRDW---DYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE---Y--CDVVTTTTHKSLR--GPR  252 (475)
T ss_pred             eEEEE-ecCc-CCCcc---CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC---C--CeEEEecCccccc--CCC
Confidence            65544 3333 56664   466788889999999999999988665533221 221   1  1278899999962  333


Q ss_pred             EEEEEeeCCCCCC-------ChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936          254 LGWFVTTDPCGMF-------RKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       254 ~G~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      .|++++++.. ..       ...++.+.++...  .+.+++++....++..+++......+++..+++.++.+.+.+.|.
T Consensus       253 Gg~I~~~~~~-~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~  331 (475)
T PLN03226        253 GGMIFFRKGP-KPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLM  331 (475)
T ss_pred             ceEEEEchhh-cccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence            3888875421 00       0001222222221  123445555556666666543333456778999999999999998


Q ss_pred             cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----CCCeEEEEe------eCChhh
Q 014936          325 EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----LKNWLRVTF------AVDPYS  393 (415)
Q Consensus       325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~------~~~~~~  393 (415)
                      +. |+.++........+++.+...   ++ ++.+ +...|.+.||.+..+..++     .++.+|++.      +.++++
T Consensus       332 ~~-G~~l~~~~t~~hi~lv~~~~~---gi-~~~~-~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d  405 (475)
T PLN03226        332 SK-GYKLVTGGTDNHLVLWDLRPL---GL-TGSR-VEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKD  405 (475)
T ss_pred             hC-CCEEEcCCCCCCEEEEEccCC---CC-CHHH-HHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHH
Confidence            86 888442223356667777431   11 3444 4555678899998765332     256799965      357889


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQR  407 (415)
Q Consensus       394 l~~~l~~l~~~~~~  407 (415)
                      ++++.+.|.++++.
T Consensus       406 ~~~ia~~i~~~~~~  419 (475)
T PLN03226        406 FEKVAEFLHRAVTI  419 (475)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988874

>PRK07482 hypothetical protein; Provisional

Probab=99.83  E-value=1.2e-17  Score=159.99  Aligned_cols=354  Identities=14%  Similarity=0.075  Sum_probs=215.8

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++||..|.-....+ -.+|++.++++++++...+ ..+.  ....+.+..+|+.+.+..+  ..-+.++++++|+
T Consensus        47 ~dG~~ylD~~sg~~~~~lG-h~~p~v~~Av~~q~~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGS  121 (461)
T PRK07482         47 AQGRRYIDAFAGLYCVNVG-YGRTEVAEAIAEQAKELAYYHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSGS  121 (461)
T ss_pred             CCCCEEEEcccchhhhcCC-CCCHHHHHHHHHHHHhcCcccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence            4588999998885332221 2479999999999886421 1111  1113455555655544222  2346899999999


Q ss_pred             HHHHHHHHHhc------C-CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCC---C------
Q 014936          111 QAIDVAMALLS------R-PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGW---E------  160 (415)
Q Consensus       111 ~al~~~~~~l~------~-~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~------  160 (415)
                      +|++.+++...      + ++ .+|+....+|++....+.....             .+..++.......   .      
T Consensus       122 EAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  201 (461)
T PRK07482        122 DANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQF  201 (461)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHH
Confidence            99999999874      1 22 5789899999986543322111             1111111100000   0      


Q ss_pred             --CChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          161 --VDLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       161 --~~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                        -+++.+++.+.   ....+.+|..| +...|.+ .+.+.+++|.++|++||+++|.||++.++...|.... ...++.
T Consensus       202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~~~~gv  280 (461)
T PRK07482        202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFG-SDHYGI  280 (461)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhh-HHhcCC
Confidence              03566777663   23456677777 4455666 6788999999999999999999999999876664322 223333


Q ss_pred             CCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936          234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVF  304 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~  304 (415)
                      .++++   +++|.+ ..| +++|.+++++        ++.+.+...        ...+++.++++.+++.+.|+...++ 
T Consensus       281 ~PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~-  347 (461)
T PRK07482        281 EPDLI---TVAKGL-TSAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERE-  347 (461)
T ss_pred             CCCEE---EEcccc-ccCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhC-
Confidence            33344   468994 456 4899998865        566665421        2235678999999999888653221 


Q ss_pred             HHHHHHHHHHHHHHHHHHhh----cCCCCcCCCCCCCceEEEEecCcccc--CCCCC----HHHHHHHHHhhcCeEEEcC
Q 014936          305 FKKTLNLLKQSVDICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLL--DDIID----DIDFCFKLAKEESVIILPG  374 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~----~~~~~~~ll~~~gi~v~~g  374 (415)
                        +..++.++.-+++.+.|+    +.|.+. . ...-|.++-+.+.....  .....    ...+...+ .++||.+.++
T Consensus       348 --~l~~~~~~~g~~l~~~L~~l~~~~~~v~-~-vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~  422 (461)
T PRK07482        348 --NLVGNAAEVGAYFRARLRAAFGDHPLVG-E-VRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAA-LERGVIARAM  422 (461)
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHhcCCCEE-E-EeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHH-HHCCcEEecC
Confidence              233334444444444443    444332 1 34557777777743110  00000    13344444 5679998653


Q ss_pred             CCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          375 TAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       375 ~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      .   ..+.+|+.+  ..+++++++++++|.+++++..+++
T Consensus       423 ~---~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~~  459 (461)
T PRK07482        423 P---HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLGRL  459 (461)
T ss_pred             C---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            2   136789876  5799999999999999998875543

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.83  E-value=4.2e-18  Score=158.30  Aligned_cols=323  Identities=15%  Similarity=0.100  Sum_probs=208.0

Q ss_pred             CCCcHHHHHHHHHHHhcC---CCCCCC----CC---CCcHHHHHHHHHHHhhhCCCCCCCCcE-EEeCChHHHHHHHHHH
Q 014936           51 FHTTHVATEAVAEALLSE---KFNGYA----PT---AGLPLTRRAIAEYLSRDLPYKLTPNDV-FVTSGCTQAIDVAMAL  119 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~---~~~~y~----~~---~g~~~lr~~ia~~~~~~~~~~~~~~~i-~i~~g~~~al~~~~~~  119 (415)
                      ...++.+++++.+.+.+.   ....+.    .+   .-+.++++.+++++    +.+ +..++ +++++++.++++++..
T Consensus        12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgt~~~Ea~~~n   86 (360)
T PRK05355         12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NIP-DNYKVLFLQGGASLQFAMVPMN   86 (360)
T ss_pred             CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEEcCCchHHHHHHHHh
Confidence            456899999998876321   001111    11   22345566666665    321 22345 4557789999999999


Q ss_pred             hcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHh-hcCCCceEEEecCCCCccccCCCHHHHH
Q 014936          120 LSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQ  196 (415)
Q Consensus       120 l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~nptG~~~~~~~l~  196 (415)
                      +..+|+++++...+.++  +.+.++.+|.. ..+...+..+. .+..++++ .++++++.|.+++..+.||+..+  ++.
T Consensus        87 l~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~  162 (360)
T PRK05355         87 LLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELP  162 (360)
T ss_pred             cCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--ccc
Confidence            99999988877666654  45677888865 55554332332 34444444 67778899999999999999974  355


Q ss_pred             HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC--CCC-hHHHHH
Q 014936          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG--MFR-KPKVVE  273 (415)
Q Consensus       197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--~~~-~~~~~~  273 (415)
                      +|      +|+++++|.+++.    +..+..+..++     +++.|..|.++.+|  +|+++.+++..  ... .+.+.+
T Consensus       163 ~i------~g~l~vVDavss~----g~~~idv~~~d-----~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~  225 (360)
T PRK05355        163 DT------GDVPLVADMSSDI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLD  225 (360)
T ss_pred             cc------CCCcEEEEcCccc----cCccCCHHHcc-----EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHH
Confidence            55      7999999999987    33444444432     77788899998777  88888865221  000 001111


Q ss_pred             HHH--hhccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC--CCceEEEEecCcc
Q 014936          274 RMK--KYFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKP--EGSMAVMLKLNLS  348 (415)
Q Consensus       274 ~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~l~~~  348 (415)
                      ...  ......++++.....++.++|+...+. .++.+.++.++..+++.+.|++++.+..+..+  ..+..+.+.++..
T Consensus       226 ~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~  305 (360)
T PRK05355        226 YKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE  305 (360)
T ss_pred             HHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh
Confidence            110  111223677777888888888765555 68999999999999999999998533222111  1223344555431


Q ss_pred             ccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       349 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                           ....++...+ .+.|+.+.+|..  ..+.+|+|+.  ++.+|++.+++.|++++.+
T Consensus       306 -----~~~~~~~~~~-~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~  358 (360)
T PRK05355        306 -----ELDKKFLAEA-KAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR  358 (360)
T ss_pred             -----HHHHHHHHHH-HHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence                 1223443444 567999866653  3578999994  6799999999999997764

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.83  E-value=4.9e-18  Score=157.16  Aligned_cols=326  Identities=14%  Similarity=0.113  Sum_probs=206.0

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .+++.++|+..|.-...  ++ .+|++.+++++++.+...  ..|.. ....++.+.++++.        ..+.++++++
T Consensus        21 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~ai~~ql~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~S   89 (364)
T PRK04013         21 SQGRRYLDLIAGIGVNV--LGHNHPEWVEEMSEQLEKLVVAGPMFEH-EEKEEMLEELSKWV--------NYEYVYMGNS   89 (364)
T ss_pred             CCCCEEEEcccChhhcc--CCCCCHHHHHHHHHHHHhcCCccCCcCC-HHHHHHHHHHHhhc--------CCCEEEEeCc
Confidence            35889999987752211  23 468899999999875322  12222 22344444444443        2468999999


Q ss_pred             hHHHHHHHHHHhc-CCC-CEEEEcCCCCcchHHHHHhC--------CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEE
Q 014936          109 CTQAIDVAMALLS-RPG-ANILLPRPGFPIYELSAAFR--------HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (415)
Q Consensus       109 ~~~al~~~~~~l~-~~g-d~vi~~~p~y~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  178 (415)
                      +++|++.+++... .+| ++|+....+|++....+...        +......++.. ..+ .|++.+++.+.+++.+++
T Consensus        90 GseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~-~~~-~d~~~l~~~i~~~~aAvi  167 (364)
T PRK04013         90 GTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKH-IPF-NDVEAAKEAITKETAAVI  167 (364)
T ss_pred             hHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEE-ecC-CCHHHHHHHhcCCcEEEE
Confidence            9999999999865 345 78999999999866544331        11110000000 011 267888888876666666


Q ss_pred             ecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          179 IINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       179 i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      +...+...|.. .+.+.++++.++|++||+++|.||++.++ ..|... ....++..++++   +++|.++ .|+++|.+
T Consensus       168 vEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~gv~PDiv---~~gK~lg-gG~P~~a~  241 (364)
T PRK04013        168 FEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHYKVEPDIV---TMGKGIG-NGVPVSLT  241 (364)
T ss_pred             EcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhcCCCCCEE---Eeccccc-CCceeEEE
Confidence            55546555664 57788999999999999999999999987 555422 222233333333   5689965 47999999


Q ss_pred             EeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          258 VTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +.+.        ++. .  .....++..++++.+++.+.|+...++.+.+   +.++.   + +.+.. +.+. . ...-
T Consensus       242 ~~~~--------~~~-~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~---~~~~~---l-~~l~~-~~v~-~-vRG~  300 (364)
T PRK04013        242 LTNF--------DVE-R--GKHGSTFGGNPLACKAVAVTLRILRRERLVE---KAGEK---F-IEIKG-ERVV-T-TRGR  300 (364)
T ss_pred             Eecc--------ccc-C--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHH---HHHHH---H-HHhcc-Ccce-e-eeeC
Confidence            9864        221 1  1123456789999999988886543222222   22221   2 22222 2222 1 3455


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      |+++-+.+..       ....+...+ .++|+.+.+..    .+.+|+...  .+++++++++++|.+++.+..
T Consensus       301 Gl~~gve~~~-------~~~~i~~~~-~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~  362 (364)
T PRK04013        301 GLMIGIVLKK-------PVGKYVEEL-QNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL  362 (364)
T ss_pred             cEEEEEEeCC-------cHHHHHHHH-HhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence            7777777742       234455554 56799987642    368999984  689999999999999997643

>PLN02590 probable tyrosine decarboxylase

Probab=99.83  E-value=8.1e-18  Score=161.65  Aligned_cols=340  Identities=11%  Similarity=0.047  Sum_probs=219.3

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCChHHHHHHHHHHhcC-------
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR-------  122 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~i~~g~~~al~~~~~~l~~-------  122 (415)
                      ..+-+.+...+... ...|...+...++++.+.+|+.+.+|.+-.     ...-++++|+|+++..++.+..+       
T Consensus       145 ~~lgd~l~sa~n~~-~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g  223 (539)
T PLN02590        145 GFLGEMLNAGLSVV-GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVG  223 (539)
T ss_pred             HHHHHHHHHhcccc-cCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhc
Confidence            33444444444432 234555567789999999999998886532     13467899999998887766432       


Q ss_pred             ----CCCEEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCCC------ceEEEecCCCCccccC
Q 014936          123 ----PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNV  189 (415)
Q Consensus       123 ----~gd~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~  189 (415)
                          +.-.|++++.+|+++..++...|+   +++.++++..+++.+|++.|++++++.      +.+|+.+-.+..||.+
T Consensus       224 ~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai  303 (539)
T PLN02590        224 KTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV  303 (539)
T ss_pred             ccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc
Confidence                112566788899999999999998   478888865456789999999988542      3455566667789999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                         +++.+|+++|++||+|+++|.+|+++..-...... +..+... . -+...++|+ +.....+|.++++++.     
T Consensus       304 ---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~A-D-Sit~D~HK~-l~~p~~cg~llvr~~~-----  372 (539)
T PLN02590        304 ---DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENA-D-SFNMNAHKW-LFANQTCSPLWVKDRY-----  372 (539)
T ss_pred             ---CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccC-C-EEEECchhh-cCcCcCEEEEEecCHH-----
Confidence               99999999999999999999999987643222111 1222111 1 334478998 5666778999887643     


Q ss_pred             HHHHHHHHhh-----------------ccccCCc-hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936          269 PKVVERMKKY-----------------FDILGDP-ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS  330 (415)
Q Consensus       269 ~~~~~~~~~~-----------------~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  330 (415)
                       .+.+.+...                 ...+... -......+...|+....+.++++.++.-+.++++.+.|++.|+++
T Consensus       373 -~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fe  451 (539)
T PLN02590        373 -SLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFE  451 (539)
T ss_pred             -HHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence             122222110                 0001111 112222333334444457889999999999999999999998999


Q ss_pred             CCCCCCCceEEEEecCccccCC--C-CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHH
Q 014936          331 CPHKPEGSMAVMLKLNLSLLDD--I-IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSF  404 (415)
Q Consensus       331 ~~~~p~~g~~~~~~l~~~~~~~--~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~  404 (415)
                      ++..|.-+ .+.+++.......  . .-..++.+++.+...+.+.+ +......++|+++.   +++++++.+++.|.+.
T Consensus       452 l~~~~~l~-iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~-t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~  529 (539)
T PLN02590        452 VVTTRYFS-LVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISH-TALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH  529 (539)
T ss_pred             EecCCceE-EEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe-eEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            65444443 4444543211000  0 00234445554444444444 33333468999994   5789999999999988


Q ss_pred             HHHHH
Q 014936          405 YQRHA  409 (415)
Q Consensus       405 ~~~~~  409 (415)
                      ..++-
T Consensus       530 a~~~~  534 (539)
T PLN02590        530 ASKFT  534 (539)
T ss_pred             HHHhc
Confidence            76653

>PLN02880 tyrosine decarboxylase

Probab=99.83  E-value=7.1e-18  Score=162.13  Aligned_cols=340  Identities=8%  Similarity=-0.001  Sum_probs=218.1

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCChHHHHHHHHHHhcC-------
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR-------  122 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~i~~g~~~al~~~~~~l~~-------  122 (415)
                      ..+-+.+...+... ...|...+...++++.+.+|+.+.+|.+-.     ...-++|+|+|+++..++.+..+       
T Consensus        97 ~~lad~l~~~~n~~-~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g  175 (490)
T PLN02880         97 GFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVG  175 (490)
T ss_pred             HHHHHHHHHhhccC-CcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhc
Confidence            34444444444432 223443446789999999999998886532     12467899999998887766532       


Q ss_pred             ----CCCEEEEcCCCCcchHHHHHhCCCe---EEEeeccCCCCCCCChhHHHhhcCCC------ceEEEecCCCCccccC
Q 014936          123 ----PGANILLPRPGFPIYELSAAFRHIE---VRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNV  189 (415)
Q Consensus       123 ----~gd~vi~~~p~y~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~  189 (415)
                          +.-.|++++.+|+++..++...|+.   ++.+|++..+++.+|++.|++++++.      +.+|+.+-.+..||.+
T Consensus       176 ~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai  255 (490)
T PLN02880        176 KNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV  255 (490)
T ss_pred             ccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc
Confidence                1125667888999999999999985   77888865556789999999988542      3455566667889999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                         +++++|+++|+++|+|+++|.+|+++........ .+..+...  .-+..+++|+ +.....+|.+++++..     
T Consensus       256 ---Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~a--DSit~d~HKw-l~~P~~~g~llvr~~~-----  324 (490)
T PLN02880        256 ---DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEA--DSFNMNAHKW-FLTNFDCSLLWVKDRN-----  324 (490)
T ss_pred             ---CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhc--CEEEECchhh-cCCCccEEEEEEeCHH-----
Confidence               7789999999999999999999998753321111 12222111  1455689998 5677779999987522     


Q ss_pred             HHHHHHHHhhcc-cc--------------CC---chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936          269 PKVVERMKKYFD-IL--------------GD---PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS  330 (415)
Q Consensus       269 ~~~~~~~~~~~~-~~--------------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  330 (415)
                       .+.+.+..... ..              ++   ........+...|+....+.+.++.++..++++++.+.|++.++++
T Consensus       325 -~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~e  403 (490)
T PLN02880        325 -ALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFE  403 (490)
T ss_pred             -HHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence             22222211100 00              00   0001111222224444457778888888899999999999988998


Q ss_pred             CCCCCCCceEEEEecCccccCCCCC----HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHH
Q 014936          331 CPHKPEGSMAVMLKLNLSLLDDIID----DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKS  403 (415)
Q Consensus       331 ~~~~p~~g~~~~~~l~~~~~~~~~~----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~  403 (415)
                      ++..|. ...+.++++..... ...    ..++.+++.++..+.+.+.. +....++|+++.   +++++++.+++.|.+
T Consensus       404 l~~~~~-~~iv~Fr~~~~~~~-~~~~~~~n~~l~~~l~~~g~~~v~~t~-~~g~~~lR~~~~n~~tt~~di~~~~~~i~~  480 (490)
T PLN02880        404 VVTPRI-FSLVCFRLVPPKNN-EDNGNKLNHDLLDAVNSSGKIFISHTV-LSGKYVLRFAVGAPLTEERHVTAAWKVLQD  480 (490)
T ss_pred             EecCCc-eEEEEEEEeCCCCC-hhhHHHHHHHHHHHHHhCCCEEEEEEE-ECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence            554444 44555566431110 000    13455555555566665433 333579999994   467999999999999


Q ss_pred             HHHHHHH
Q 014936          404 FYQRHAK  410 (415)
Q Consensus       404 ~~~~~~~  410 (415)
                      ..+++..
T Consensus       481 ~~~~~~~  487 (490)
T PLN02880        481 EASKLLG  487 (490)
T ss_pred             HHHHHHH
Confidence            8887654

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.83  E-value=1.6e-17  Score=158.64  Aligned_cols=350  Identities=16%  Similarity=0.147  Sum_probs=207.2

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+++.++||..|.-.... --.+|.+.+++++++....+.  .|..    .+.+..+++.+.+..+  ...+.++++++|
T Consensus        50 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SG  122 (457)
T PRK05639         50 VDGNVFIDFLAGAAAAST-GYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEISP--IENPKVLFGLSG  122 (457)
T ss_pred             CCCCEEEECCcCHHhhcc-CCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCch
Confidence            347889999877422111 124788999999998753221  2222    2333344444443222  223689999999


Q ss_pred             HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCC--CC----CCh----
Q 014936          110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE----VDL----  163 (415)
Q Consensus       110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~----~~~----  163 (415)
                      ++|++.+++...  ....+|+....+|++....+... +.             ++..+|.+....  +.    -+.    
T Consensus       123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  202 (457)
T PRK05639        123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI  202 (457)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence            999999998864  22357899999999866544321 10             122233211000  00    012    


Q ss_pred             ----hHHHhhc-----CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          164 ----DDIESLA-----DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       164 ----~~l~~~~-----~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                          +.+++.+     .+...+.+|..| +...|.+ .|.+.+++|.++|++||+++|.||++.++...|.... ...++
T Consensus       203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~g  281 (457)
T PRK05639        203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFA-SEWFE  281 (457)
T ss_pred             HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHH-HHhcC
Confidence                2344433     234456677777 5556764 6788899999999999999999999997655554221 12223


Q ss_pred             CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL  312 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  312 (415)
                      ...+++   +++|.+ ..|+.+|++++++        ++.+........+...+++...++.+.|+...+   ++..++.
T Consensus       282 v~PDiv---~~gK~l-~gG~pi~av~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~l~~~~  346 (457)
T PRK05639        282 VKPDLI---IFGKGV-ASGMGLSGVIGRK--------ELMDLTSGSALLTPAANPVISAAAEATLEIIEE---ENLLKNA  346 (457)
T ss_pred             CCCCEE---Eechhh-cCCCcceeEEehH--------HHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHH---ccHHHHH
Confidence            233333   379995 4578999999865        555522111223556788888888888765322   1233444


Q ss_pred             HHHHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCcccc-CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe
Q 014936          313 KQSVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL-DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF  387 (415)
Q Consensus       313 ~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~  387 (415)
                      +++-++|.+.|++    .+.+.  ....-|+++-+.+..... +.......+...+ .++|+.+.+...  ..+.+|+..
T Consensus       347 ~~~g~~l~~~L~~l~~~~~~~~--~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~g~--~~~~lr~~P  421 (457)
T PRK05639        347 LKVGEFIKKRLLEMKESFEVIG--DVRGKGLMIGVEIVKENGKPDPELTGKICWRA-FELGLILPSYGM--FGNVIRITP  421 (457)
T ss_pred             HHHHHHHHHHHHHHHHhCCCEE--eeccceeEEEEEEecCCCCCCHHHHHHHHHHH-HhCCeEEeecCC--CCCEEEEeC
Confidence            4455555555544    33222  134556676666632110 0000122344444 567999976421  146899998


Q ss_pred             e--CChhhHHHHHHHHHHHHHHHH
Q 014936          388 A--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       388 ~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      .  .+++++++++++|.+++++..
T Consensus       422 pl~it~~~id~~~~~l~~~l~~~~  445 (457)
T PRK05639        422 PLVITKEIAEKGLEIMERAIKDAL  445 (457)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHH
Confidence            4  789999999999999998764

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.83  E-value=4e-19  Score=153.33  Aligned_cols=357  Identities=18%  Similarity=0.198  Sum_probs=247.7

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCCCCCCC-CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSC-FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL   94 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~   94 (415)
                      +|....+.+..+-     +...+||+.|.-.-..+ ..+.+.|++|-++.........|-+..|.+++.+..+++.   +
T Consensus        38 pILGVTeAfk~D~-----n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa---~  109 (427)
T KOG1411|consen   38 PILGVTEAFKKDP-----NPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLA---L  109 (427)
T ss_pred             CcccHHHHHhcCC-----CcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHh---h
Confidence            6666666555443     55679999996432222 3356889998888776555568999999999999999998   4


Q ss_pred             CCC---CCCCcEEE--eCChHHHHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936           95 PYK---LTPNDVFV--TSGCTQAIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE  167 (415)
Q Consensus        95 ~~~---~~~~~i~i--~~g~~~al~~~~~~l--~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  167 (415)
                      |.+   +..++|+.  +-+||.++.+....+  .-++..|.+++|+|.+....+...|+.+..+..-.....++|.+.+.
T Consensus       110 G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~l  189 (427)
T KOG1411|consen  110 GDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGML  189 (427)
T ss_pred             cCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHH
Confidence            422   34456654  334677776665554  35788999999999999999999999987776533344567877766


Q ss_pred             hhcCCCc-eEEEec--CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC--cccccccCC-CCCeEEEc
Q 014936          168 SLADQNT-VALVII--NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP--FVPMGVFGS-TVPILTLG  241 (415)
Q Consensus       168 ~~~~~~~-~~v~i~--~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~-~~~~i~~~  241 (415)
                      +.+.+.+ ..+++.  ..|||||+-.+.+++++|..+.++.+.+-+.|-+|.+|.-+...  ...+..+.. ..++..+.
T Consensus       190 edl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQ  269 (427)
T KOG1411|consen  190 EDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQ  269 (427)
T ss_pred             HHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeeh
Confidence            6555432 223333  33999999999999999999999999999999999998754321  112222222 23578899


Q ss_pred             cCccccCCCCceEEEE--EeeCCCCCCChHHHHHHH----Hhh-ccccCCchhHHHHHHHHhhCCCc--HHHH---HHHH
Q 014936          242 SLSKRWIVPGWRLGWF--VTTDPCGMFRKPKVVERM----KKY-FDILGDPATFIQAAVPSILQQPD--EVFF---KKTL  309 (415)
Q Consensus       242 s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~a~~~~l~~~~--~~~~---~~~~  309 (415)
                      |++|.+|+.|-|+|.+  +|.+       .+...++    +.. +.+..+++..+...+..+|.+..  .+|+   +-+.
T Consensus       270 SyAKNMGLYgERvGa~svvc~~-------ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~Ma  342 (427)
T KOG1411|consen  270 SYAKNMGLYGERVGALSVVCKD-------ADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMA  342 (427)
T ss_pred             hhhhhcchhhhccceeEEEecC-------HHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHH
Confidence            9999999999999996  4433       2333333    333 23456777788888888888743  3443   3455


Q ss_pred             HHHHHHHHHHHHHhhcC--CC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEE
Q 014936          310 NLLKQSVDICYNKIKEI--PC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT  386 (415)
Q Consensus       310 ~~~~~~~~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~  386 (415)
                      +++...|..+.+.|+..  ++ +. .+..+-|+|++-.++          .+.+..+.+++-|.+.--        =|||
T Consensus       343 dRi~~mR~~L~d~L~~~gs~~~W~-hI~~QIGMF~fTgl~----------peQv~~l~ke~~iYmT~d--------GRiS  403 (427)
T KOG1411|consen  343 DRIISMRQQLFDALEKEGSPGNWS-HITKQIGMFCFTGLN----------PEQVDWLTKEYHIYLTKD--------GRIS  403 (427)
T ss_pred             HhhhhhHHHHhHHhhcCCCCccHH-HHHHhhheeeecCCC----------HHHHHHHHhhheeeeccC--------ceEe
Confidence            77777888888888764  22 22 124567999987764          245677888888987632        2999


Q ss_pred             e-eCChhhHHHHHHHHHHHHH
Q 014936          387 F-AVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       387 ~-~~~~~~l~~~l~~l~~~~~  406 (415)
                      + +.+...+..+.+.|.++.+
T Consensus       404 ~aG~ss~nV~yLa~aih~vtk  424 (427)
T KOG1411|consen  404 MAGLSSSNVPYLADAIHAVTK  424 (427)
T ss_pred             eccccccCCcccchhhHhHhc
Confidence            9 4677777777777665543

>PRK07678 aminotransferase; Validated

Probab=99.83  E-value=1.7e-17  Score=158.74  Aligned_cols=349  Identities=16%  Similarity=0.118  Sum_probs=209.1

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++||..|.-.... --.+|++.+++.+++....+..  .... .+....+|+.+.+..+   ..+.++++++|++
T Consensus        44 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~--~~~~-~~~~~~lae~l~~~~~---~~~~v~f~~sGse  116 (451)
T PRK07678         44 IQGNRYLDGMSGLWCVNV-GYGRKELAEAAYEQLKTLSYFP--LTQS-HEPAIKLAEKLNEWLG---GEYVIFFSNSGSE  116 (451)
T ss_pred             CCCCEEEEccccHHhhcC-CCCCHHHHHHHHHHHHhcCccc--cccC-CHHHHHHHHHHHHhCC---CCCEEEEeCCcHH
Confidence            348889999777422111 1247999999999887543211  1111 2333445555544332   2358999999999


Q ss_pred             HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCC---------
Q 014936          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV---------  161 (415)
Q Consensus       112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~---------  161 (415)
                      |++.+++....       +| .+|+....+|++....+.....             .+..++..  +.+..         
T Consensus       117 A~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  194 (451)
T PRK07678        117 ANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPP--DCYRMPGIESEDIY  194 (451)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCC--ccccccccCChHHH
Confidence            99999987641       23 5789999999987655433211             11112111  11110         


Q ss_pred             C---hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          162 D---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       162 ~---~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                      +   ++.+++.++   +...+.+|..| +...|.+ .+.+.++++.++|++||+++|.||++.++...|... .+..++.
T Consensus       195 ~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~gv  273 (451)
T PRK07678        195 DLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMNYGV  273 (451)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HHHhcCC
Confidence            1   223455553   23456677777 4445665 678889999999999999999999998876555421 1223333


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      .+.++   +++|.++...+++|.+++++        ++.+.+...       ...+++.++++.+++.+.|+...++   
T Consensus       274 ~PDiv---t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~---  339 (451)
T PRK07678        274 KPDII---TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENE---  339 (451)
T ss_pred             CCCEE---EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhC---
Confidence            33333   57899654447999999975        677766531       2345678899999998888653221   


Q ss_pred             HHHHHHHHHHHHHHHHh----hcCCCCcCCCCCCCceEEEEecCccccC----CCCCHHHHHHHHHhhcCeEEEcCCCC-
Q 014936          307 KTLNLLKQSVDICYNKI----KEIPCISCPHKPEGSMAVMLKLNLSLLD----DIIDDIDFCFKLAKEESVIILPGTAV-  377 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l----~~~~~~~~~~~p~~g~~~~~~l~~~~~~----~~~~~~~~~~~ll~~~gi~v~~g~~~-  377 (415)
                      ...++.++.-+++.+.|    ++.+.+. . ...-|.++-+.+......    +......+... +.++||.+.+.... 
T Consensus       340 ~~~~~~~~~g~~l~~~l~~~~~~~~~v~-~-vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~-l~~~Gv~~~~~g~~v  416 (451)
T PRK07678        340 NLIERSAQLGELLLEQLKEELGEHPLVG-D-IRGKGLLVGIELVNDKETKEPADNDKVASVVAA-CKEKGLIIGKNGDTV  416 (451)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCEE-E-EEeeceEEEEEEecCCcccCcCchHHHHHHHHH-HHHCCcEEeecCccc
Confidence            23344444444444444    3443222 1 334566666666321100    00012344444 45679999763211 


Q ss_pred             -CCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          378 -GLKNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       378 -~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                       ...+.+|++..  ++++++++++++|.+++++
T Consensus       417 ~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~  449 (451)
T PRK07678        417 AGYNNVLTLSPPLVISSEEIAFIVGTLKTALER  449 (451)
T ss_pred             cCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence             22367999984  5999999999999998865

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.83  E-value=2.5e-17  Score=156.98  Aligned_cols=350  Identities=16%  Similarity=0.134  Sum_probs=209.4

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++||..|.-.... --.+|.+.+++++++++..+ ..+.   ...+.+..+|+.+.+..+  -..+.++++++|+
T Consensus        43 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~~~~~~---~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGs  116 (442)
T PRK13360         43 HDGRRVLDGTAGLWCVNA-GHGRPEIVEAVRAQAGELDYAPAFQ---MGHPKAFELANRIAEIAP--GGLNHVFFTNSGS  116 (442)
T ss_pred             CCCCEEEECchhHHHhcc-CCCCHHHHHHHHHHHHhCCCcccCC---cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence            358889999777422111 12579999999999875221 1111   112344455555544222  1236899999999


Q ss_pred             HHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-C------------CeEEEeeccCC---CCCCC-----
Q 014936          111 QAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-H------------IEVRHFDLLPD---KGWEV-----  161 (415)
Q Consensus       111 ~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g------------~~~~~~~~~~~---~~~~~-----  161 (415)
                      +|++.+++....       +| .+|+....+|++....+... |            ..+..+|....   ..+..     
T Consensus       117 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  196 (442)
T PRK13360        117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH  196 (442)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence            999999987541       12 57999999999865433211 1            11122222110   00111     


Q ss_pred             ---ChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          162 ---DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       162 ---~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                         .++.+++.+.   ....+.+++.| +...|.. .+.+.+++|.++|++||+++|+||++.++...|.... ...++.
T Consensus       197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv  275 (442)
T PRK13360        197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFA-AQYFGV  275 (442)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchh-hhhcCC
Confidence               1456666664   23455677777 5556765 6788899999999999999999999977654444321 122222


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHH
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      ...+   .+++|.++...+++|.+++++        ++.+.+...        ...+++.++++..++.+.|+...+   
T Consensus       276 ~PDi---vt~gK~l~gG~~P~gav~~~~--------~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~---  341 (442)
T PRK13360        276 TPDL---LTCAKGLTNGAIPMGAVFVSS--------EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER---  341 (442)
T ss_pred             CCce---eeeeeccccCccceEEEEEcH--------HHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh---
Confidence            2222   378999654337899998865        566655421        123556788888888888864322   


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcCCC-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936          306 KKTLNLLKQSVDICYNKIKEIPCISCPH-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR  384 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR  384 (415)
                      +...++.+++.+++.+.|+++.....+. ....|++.-+.+............++...+ .++||.+.++.     +.+|
T Consensus       342 ~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~~-----~~lr  415 (442)
T PRK13360        342 EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKC-FEKGLMIRYTG-----DILA  415 (442)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHH-HHCCcEEEecC-----CEEE
Confidence            2345666666667777776542221111 223355544444321110001233455554 56799997642     5799


Q ss_pred             EEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          385 VTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       385 i~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      |++  ..+++++++++++|.++++++
T Consensus       416 ~~Ppl~~t~~eid~~~~~l~~~l~~~  441 (442)
T PRK13360        416 LSPPLIIEEAQIDELFDILAQALKET  441 (442)
T ss_pred             EeCCCccCHHHHHHHHHHHHHHHHHh
Confidence            997  478999999999999998653

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.83  E-value=1.2e-17  Score=150.54  Aligned_cols=216  Identities=20%  Similarity=0.126  Sum_probs=161.4

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~  153 (415)
                      ....+.+.+++..        ...+.+++++|..|+..++..++..|++|+....+|.+....+    ..+|++...++.
T Consensus        78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~  149 (409)
T KOG0053|consen   78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV  149 (409)
T ss_pred             chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence            4567888888876        4567999999999999999999999999999999999866554    466777777654


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                             -+++.+++++++++++|++-+|.||+..+   .++++|+++|+++|+++++|+.++...+-     ....++.
T Consensus       150 -------~~~~~~~~~i~~~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~~~-----~pL~lGA  214 (409)
T KOG0053|consen  150 -------DDLKKILKAIKENTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPYNQ-----DPLPLGA  214 (409)
T ss_pred             -------hhHHHHHHhhccCceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCccccc-----ChhhcCC
Confidence                   26888999999999999999999999999   67888888889999999999999864321     1223444


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLL  312 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  312 (415)
                      +   |++.|.+|.++..+-=+|.+++.+      .+++..+++... ...++.++.....+.+-++.     +.-+.++.
T Consensus       215 D---IV~hSaTKyi~Ghsdvi~G~iv~n------~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt-----l~lRi~~~  280 (409)
T KOG0053|consen  215 D---IVVHSATKYIGGHSDVIGGSVVLN------SEELASRLKFLQEDLGWCEDPFDLFLLSRGLKT-----LHLRINKH  280 (409)
T ss_pred             C---EEEEeeeeeecCCcceeeeEEecC------cHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch-----hhhhHHHH
Confidence            4   899999999887665555555543      236788777764 34567777776666666654     34445555


Q ss_pred             HHHHHHHHHHhhcCCCCc
Q 014936          313 KQSVDICYNKIKEIPCIS  330 (415)
Q Consensus       313 ~~~~~~l~~~l~~~~~~~  330 (415)
                      .++.-.+.+.|+..|.++
T Consensus       281 ~ena~~~A~~Le~~~~v~  298 (409)
T KOG0053|consen  281 SENALKIALLLEAHPKVK  298 (409)
T ss_pred             HHHHHHHHHHhhhCCcee
Confidence            566555666666555444

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.83  E-value=1.8e-17  Score=158.30  Aligned_cols=350  Identities=14%  Similarity=0.058  Sum_probs=212.5

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-.... --.+|.+.+++++++....+....  ....+.+..+|+.+.+..+  ..-+.++++++|++
T Consensus        51 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGse  125 (453)
T PRK06943         51 RDGRRYLDAISSWWVNLF-GHANPRINAALKDQLDTLEHAMLA--GCTHEPAIELAERLAALTG--GTLGHAFFASDGAS  125 (453)
T ss_pred             CCCCEEEEcchHHHHhcC-CCCCHHHHHHHHHHHHhcCCcccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCCHH
Confidence            347889999777421111 124799999999998753211100  0112344455555544222  12358999999999


Q ss_pred             HHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCC--CC--------
Q 014936          112 AIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKG--WE--------  160 (415)
Q Consensus       112 al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~--------  160 (415)
                      |++.+++...       .+| .+|+....+|++....+.....             .+..++......  +.        
T Consensus       126 Ave~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  205 (453)
T PRK06943        126 AVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAA  205 (453)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHH
Confidence            9999999862       122 5799999999986543332211             112222111000  00        


Q ss_pred             CChhHHHhhcCC--CceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          161 VDLDDIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       161 ~~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                      -+++.+++.++.  ...+.++..|  +...|. ..|.+.++++.++|++||+++|.||++.++...|.... ...++..+
T Consensus       206 ~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa-~~~~gv~P  284 (453)
T PRK06943        206 RALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFA-CEQAGVWP  284 (453)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhH-HHhCCCCC
Confidence            124666666642  3455666777  566676 46889999999999999999999999998765554221 22233333


Q ss_pred             CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVFFKK  307 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  307 (415)
                      +++   +++|.++ .| +++|.+++++        ++.+.+...       ...+++.++++.+++.+.|+...++   +
T Consensus       285 Div---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~---~  349 (453)
T PRK06943        285 DFL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAED---D  349 (453)
T ss_pred             CeE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhc---C
Confidence            344   4689954 67 5999999975        566666421       2235667899999988888653221   2


Q ss_pred             HHHHHHHHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936          308 TLNLLKQSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR  384 (415)
Q Consensus       308 ~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR  384 (415)
                      ..++.++.-+++.+.|++   .+.+. . ...-|+++-+.+.............+... +.++||.+.+..     +.+|
T Consensus       350 l~~~~~~~G~~l~~~L~~l~~~~~v~-~-vrG~Gl~~gvel~~~~~~~~~~~~~i~~~-~~~~Gll~~~~g-----~~l~  421 (453)
T PRK06943        350 VLARNARKSARLRAALAPLAAHPQVR-H-LRQRGTIFAFDVALDGDAARTFSRRFFEA-ALERELLLRPIG-----TTVY  421 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCEE-e-EeccccEEEEEEccCCCcchHHHHHHHHH-HHHCCcEEEecC-----CEEE
Confidence            334444444555555543   34443 1 34557777776642110000012334444 456799997642     4699


Q ss_pred             EEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936          385 VTF--AVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       385 i~~--~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      +++  ..+++++++++++|.+++++...
T Consensus       422 ~~Ppl~it~~eid~~~~~l~~al~~~~~  449 (453)
T PRK06943        422 LMPPYVLDDDEIAWLAERTRATLDATLA  449 (453)
T ss_pred             EeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence            995  58999999999999999987643

>PRK12403 putative aminotransferase; Provisional

Probab=99.82  E-value=2.8e-17  Score=157.40  Aligned_cols=351  Identities=16%  Similarity=0.158  Sum_probs=204.6

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CC-C-CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GY-A-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~y-~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .+|+.++||..|.-....+. .+|.+.+++++++....+. .+ . ......+|.+.+++++    +  ...+.++++++
T Consensus        51 ~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~----p--~~~~~v~f~~S  123 (460)
T PRK12403         51 NDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLL----P--GHYSHAIYTNS  123 (460)
T ss_pred             CCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhC----C--CCcCEEEEeCC
Confidence            34788999877742212222 5799999999998753211 11 1 1112334555555543    2  12368999999


Q ss_pred             hHHHHHHHHHHhc-------CCCC-EEEEcCCCCcchHHHHHh-CCCe-----------EEEeeccCC--CCCCC-----
Q 014936          109 CTQAIDVAMALLS-------RPGA-NILLPRPGFPIYELSAAF-RHIE-----------VRHFDLLPD--KGWEV-----  161 (415)
Q Consensus       109 ~~~al~~~~~~l~-------~~gd-~vi~~~p~y~~~~~~~~~-~g~~-----------~~~~~~~~~--~~~~~-----  161 (415)
                      |++|++.+++...       ++++ .|+....+|++....+.. .|..           +..++....  ..+..     
T Consensus       124 GseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  203 (460)
T PRK12403        124 GSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEF  203 (460)
T ss_pred             cHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence            9999999999874       2333 355556677765443322 2211           111211000  00001     


Q ss_pred             ---ChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          162 ---DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       162 ---~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                         +++.+++.+.   ....+.++..| ....|.+ .+.+.+++|.++|++||+++|.||++.++...|.... ...++.
T Consensus       204 ~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~gv  282 (460)
T PRK12403        204 GRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA-HEHFGF  282 (460)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhh-hhhcCC
Confidence               1244554442   23455667777 4555765 5788899999999999999999999988766654322 122333


Q ss_pred             CCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936          234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPDEVFFKK  307 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  307 (415)
                      .++++   +++|.+ ..| +.+|.+++++        ++.+.+...     ...+++.+|++.+++.+.|+...++   .
T Consensus       283 ~PDiv---~~gK~l-ggG~~Piga~v~~~--------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~---~  347 (460)
T PRK12403        283 EPDTL---SIAKGL-TSGYVPMGGLVLSK--------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDE---G  347 (460)
T ss_pred             CCCeE---EEcccc-cccccceEEEEECH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc---c
Confidence            23333   479995 456 4899998864        576666421     1234568899999888888653222   1


Q ss_pred             HHHHHH-HHHHHHHHHh----hcCCCCcCCCCCCCceEEEEecCccccCC--CCCH---HHHHHHHHhhcCeEEEcCCCC
Q 014936          308 TLNLLK-QSVDICYNKI----KEIPCISCPHKPEGSMAVMLKLNLSLLDD--IIDD---IDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       308 ~~~~~~-~~~~~l~~~l----~~~~~~~~~~~p~~g~~~~~~l~~~~~~~--~~~~---~~~~~~ll~~~gi~v~~g~~~  377 (415)
                      ..++++ ++-+++.+.|    ++.|.+. . ...-|++..+.+.......  ....   ...+...+.+.|+.+.+..  
T Consensus       348 l~~~~~~~~g~~l~~~L~~l~~~~~~i~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--  423 (460)
T PRK12403        348 VVTRVKDDTGPYLQRCLREVFGDHPLVG-E-VQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL--  423 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCEE-e-EeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC--
Confidence            233442 3444444444    3443322 1 3455777777663211000  0001   1112233456799997532  


Q ss_pred             CCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHHHh
Q 014936          378 GLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       378 ~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                         +.+|++..  .++++++++++.|.+++.++.+++
T Consensus       424 ---~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~~~  457 (460)
T PRK12403        424 ---GRMIMAPALVAGRAEIDELVDKTRIAVDRTAREV  457 (460)
T ss_pred             ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence               45888885  499999999999999999887654

>PRK05965 hypothetical protein; Provisional

Probab=99.82  E-value=2e-17  Score=158.36  Aligned_cols=350  Identities=14%  Similarity=0.093  Sum_probs=212.4

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-....+ -.+|++.+++++++....+. ........+.+..+|+.+.+..+  ...+.++++++|++
T Consensus        43 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGSE  118 (459)
T PRK05965         43 ASGHQLLDAFAGLWCVNVG-YGQESIVEAAAEQMRELPYA-TGYFHFGSEPAIRLAAKLAERAP--GSLNHVYFTLGGSD  118 (459)
T ss_pred             CCCCEEEECcccHHhccCC-CCCHHHHHHHHHHHHhcCCc-ccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCChhH
Confidence            3588999997774221111 24799999999998753221 00000112333445555543221  23468999999999


Q ss_pred             HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-CC------------eEEEeeccCCC--CCCCC------
Q 014936          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDK--GWEVD------  162 (415)
Q Consensus       112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~~~------  162 (415)
                      |++.+++....       ++ .+|+....+|++....+... +.            .+..++.....  .+..|      
T Consensus       119 Ave~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (459)
T PRK05965        119 AVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIA  198 (459)
T ss_pred             HHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHH
Confidence            99999987541       22 57999999999865433221 11            01122211000  00112      


Q ss_pred             --hhHHHhhcCC---CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          163 --LDDIESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       163 --~~~l~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                        ++.+++.+..   ...+.+|..| +...|.+ .|.+.++++.++|++||+++|.||++.++...|... ....++..+
T Consensus       199 ~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~P  277 (459)
T PRK05965        199 ASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEAEGVVP  277 (459)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh-hHhhcCCCC
Confidence              2456666642   3456677777 5556664 688899999999999999999999999987666432 222333333


Q ss_pred             CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      .++   +++|.+ ..| +++|.+++++        ++.+.+...        ...+++.++++.+++.+.|+...+   +
T Consensus       278 Div---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~---~  342 (459)
T PRK05965        278 DLM---TVAKGL-TSGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE---G  342 (459)
T ss_pred             CeE---Eechhh-ccCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh---c
Confidence            344   568995 557 5999999975        677666421        223567899999988888865322   2


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccc-cCCC-C---C-HHHHHHHHHhhcCeEEEcCCCC
Q 014936          307 KTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSL-LDDI-I---D-DIDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~-~~~~-~---~-~~~~~~~ll~~~gi~v~~g~~~  377 (415)
                      +..++.++.-+++.+.|+++   |.+.  ....-|+++-+.+.... .... .   . ...+... +.++||.+.+..  
T Consensus       343 ~l~~~~~~~g~~l~~~l~~l~~~~~v~--~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gll~~~~g--  417 (459)
T PRK05965        343 GLLANGQKAGPRFAAGLDALRAHPLVG--DVRGRGLLGALELVADKATKTPFDAALDPADRIFDR-AYANGLVFRAFG--  417 (459)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCCCEE--EEeecceEEEEEEeccccccCCCCchhHHHHHHHHH-HHhCCeEEEecC--
Confidence            34455555556666666553   3222  13445666666663211 0000 0   0 2234444 456799997632  


Q ss_pred             CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                        ...+|+.+  ..+++++++++++|.++++++
T Consensus       418 --~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~  448 (459)
T PRK05965        418 --DGVLGFAPALCCTEGEFDLIFERTRKTLDDV  448 (459)
T ss_pred             --CcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence              36789987  478999999999999999875

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.82  E-value=4.4e-17  Score=155.90  Aligned_cols=349  Identities=15%  Similarity=0.096  Sum_probs=209.0

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +|+.++||..+..   ..++ .+|.+.+++.+++....+.   ......+.+..+++.+.+..+  ...+.+++++++++
T Consensus        70 dG~~ylD~~g~~~---~~lGh~~p~v~~Ai~~ql~~~~~~---~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse  141 (459)
T PRK06082         70 DGKKYMDFHGNNV---HQLGYGHPHVIEKVKEQMAKLPFS---PRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTS  141 (459)
T ss_pred             CCCEEEEcccHhh---cccCCCCHHHHHHHHHHHHhCCCc---cCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHH
Confidence            4778889863321   1233 6899999999998753221   111112444455555544332  12368999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CCe------------EEEeeccCC--CCCC-C------ChhHHH
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPD--KGWE-V------DLDDIE  167 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~--~~~~-~------~~~~l~  167 (415)
                      |++.+++...  ....+|+....+|++....+... |..            +..++....  ..+. .      +++.++
T Consensus       142 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  221 (459)
T PRK06082        142 AIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLE  221 (459)
T ss_pred             HHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHH
Confidence            9999998764  12267888888888765433322 211            111221000  0010 0      134566


Q ss_pred             hhcCC-CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          168 SLADQ-NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       168 ~~~~~-~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                      +.++. ...+.+|..| ++..+...+.+.++++.++|++||+++|.||++.++...|.... ...++..++++   +++|
T Consensus       222 ~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa-~e~~gv~PDiv---~~gK  297 (459)
T PRK06082        222 YVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFT-HQAYGIEPDIL---CIGK  297 (459)
T ss_pred             HHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhH-hHhhCCCCCEE---Eecc
Confidence            66642 2455677777 44445567889999999999999999999999998765554321 12233333334   4799


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      .++.+.+++|.+++++        ++....... ...+...++++.+++.+.|+...+   ++..++++++-+++.+.|+
T Consensus       298 gl~gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~  366 (459)
T PRK06082        298 GLGGGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ---EGLLEKVKADSQFMRERLL  366 (459)
T ss_pred             cccCCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence            9654336999999865        444332211 124667889988888888864321   1344555566666666665


Q ss_pred             c----CCCCcCCCCCCCceEEEEecCccccCCCCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHH
Q 014936          325 E----IPCISCPHKPEGSMAVMLKLNLSLLDDIID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLE  395 (415)
Q Consensus       325 ~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~  395 (415)
                      +    .|.+.  ....-|+++.+.+.........+   ...+...+ .++||.+.+..    .+.+|++.  ..++++++
T Consensus       367 ~l~~~~~~i~--~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid  439 (459)
T PRK06082        367 EMKAKYPLIG--DVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRC-LNNGLSFKVSQ----GNVIQLSPPLIITREELT  439 (459)
T ss_pred             HHHhhCCCee--eeeeccceeEEEEccCccccCccHHHHHHHHHHH-HhCCCEEEecC----CCEEEEeCCCccCHHHHH
Confidence            4    33222  13445777777664211000001   22344444 56799987632    37899997  46999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       396 ~~l~~l~~~~~~~~~~  411 (415)
                      ++++++.+++.++.+.
T Consensus       440 ~~~~~l~~~l~~~~~~  455 (459)
T PRK06082        440 QALAILEEAIAKICQD  455 (459)
T ss_pred             HHHHHHHHHHHHHhhh
Confidence            9999999999887554

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.82  E-value=1.1e-17  Score=158.38  Aligned_cols=341  Identities=15%  Similarity=0.096  Sum_probs=211.2

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-....+ -.+|.+.+++++++....+.....  ...+.+..+|+.+.+..+  ...+.++++++|++
T Consensus        40 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsE  114 (428)
T PRK07986         40 ADGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGG--ITHPPAIELCRKLVAMTP--QPLECVFLADSGSV  114 (428)
T ss_pred             CCCCEEEEcchhHHhhcCC-CCCHHHHHHHHHHHhhcCCccccc--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence            3588899998774221111 246899999999987533211111  112344555555544322  23469999999999


Q ss_pred             HHHHHHHHhcC------CC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCC-----CCChhH
Q 014936          112 AIDVAMALLSR------PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGW-----EVDLDD  165 (415)
Q Consensus       112 al~~~~~~l~~------~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~~~~~  165 (415)
                      |++.+++....      .| .+|+....+|++....+... +.             .+..++.. ...+     .-|++.
T Consensus       115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~d~~~  193 (428)
T PRK07986        115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAP-QSRFDGEWDERDIAP  193 (428)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCC-CcccchhhHHHHHHH
Confidence            99999987542      22 57999999998765443322 11             11112211 0010     124567


Q ss_pred             HHhhcCC--CceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936          166 IESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (415)
Q Consensus       166 l~~~~~~--~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (415)
                      +++.++.  ...+.++..|  +...|.. .+.+.+++|.++|++||+++|+||++.++...|.... ...++..+.++  
T Consensus       194 l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa-~~~~gv~PDi~--  270 (428)
T PRK07986        194 FARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFA-CEHAGIAPDIL--  270 (428)
T ss_pred             HHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeee-ecccCCCCCEE--
Confidence            7776642  2345666666  4455654 5678999999999999999999999987654454321 12222222233  


Q ss_pred             ccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936          241 GSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK  313 (415)
Q Consensus       241 ~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  313 (415)
                       +++|.+ ..| +.+|.+++++        ++.+.+...      ...+++.+|++.+++.+.|+...++   +..++++
T Consensus       271 -t~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~---~~~~~~~  337 (428)
T PRK07986        271 -CLGKAL-TGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG---DWQQQVA  337 (428)
T ss_pred             -Eechhh-hCCcccCcchhchH--------HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHH
Confidence             589996 466 5888888865        677776542      2234567888888888888653221   3455666


Q ss_pred             HHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--e
Q 014936          314 QSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--A  388 (415)
Q Consensus       314 ~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~  388 (415)
                      ++.+++.+.|+++   +.+. . ...-|++.-+.+...     .....+...+ .++||.+.+..     +.+|+..  .
T Consensus       338 ~~g~~l~~~l~~l~~~~~i~-~-vRg~Gl~~~ve~~~~-----~~~~~~~~~l-~~~Gl~~~~~g-----~~i~~~Ppl~  404 (428)
T PRK07986        338 AIEAQLREELAPLRDAPMVA-D-VRVLGAIGVVETTRP-----VNMAALQRFF-VEQGVWIRPFG-----KLIYLMPPYI  404 (428)
T ss_pred             HHHHHHHHHHHHHhcCCCEE-e-EeccceEEEEEeCCc-----ccHHHHHHHH-HHCCcEEEecC-----CEEEEeCCCC
Confidence            6666666666653   3222 1 234466766666431     1234455544 67799998742     5799977  5


Q ss_pred             CChhhHHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~~  407 (415)
                      .+++++++++++|.+++++
T Consensus       405 it~~ei~~~~~~l~~~l~~  423 (428)
T PRK07986        405 ILPEQLQRLTAAVNRAVQD  423 (428)
T ss_pred             CCHHHHHHHHHHHHHHHhh
Confidence            7999999999999999864

>PRK06062 hypothetical protein; Provisional

Probab=99.82  E-value=2.5e-17  Score=157.35  Aligned_cols=347  Identities=16%  Similarity=0.110  Sum_probs=208.0

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-.... --.+|.+.+++++++....+.  ... ...+.+..+|+.+.+..+  -..+.++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~--~~~-~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE  123 (451)
T PRK06062         50 YEGRRYLDFSSQLVNTNI-GHQHPKVVAAIQEQAARLCTV--APA-HANDARSEAARLIAERAP--GDLSKVFFTNGGAD  123 (451)
T ss_pred             CCCCEEEEcccCHHhhcC-CCCCHHHHHHHHHHHHhcCCc--CCc-cCCHHHHHHHHHHHHhCC--CCCCEEEEcCChHH
Confidence            358889999877522111 124789999999998753321  111 123444555555543222  12469999999999


Q ss_pred             HHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhCCC------------eEEEeeccCCC--CCC--CC-------hhHH
Q 014936          112 AIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFRHI------------EVRHFDLLPDK--GWE--VD-------LDDI  166 (415)
Q Consensus       112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~g~------------~~~~~~~~~~~--~~~--~~-------~~~l  166 (415)
                      |++.+++.... .| .+|+....+|++....+.....            .+..++.....  .+.  -+       ++.+
T Consensus       124 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l  203 (451)
T PRK06062        124 ANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHL  203 (451)
T ss_pred             HHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHH
Confidence            99999987641 22 5788899999887655433211            11111111000  010  12       5667


Q ss_pred             HhhcCC---CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936          167 ESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (415)
Q Consensus       167 ~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (415)
                      ++.++.   ...+.++..| ....|.+ .|.+.++++.++|+++|+++|+||++.++...|... ....++..+.   +.
T Consensus       204 e~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PD---i~  279 (451)
T PRK06062        204 ERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPD---LI  279 (451)
T ss_pred             HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCC---ee
Confidence            776642   3456677777 4455665 578889999999999999999999999875554321 1122222222   33


Q ss_pred             cCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH-
Q 014936          242 SLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV-  316 (415)
Q Consensus       242 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~-  316 (415)
                      +++|.+ ..| +++|.+++++        ++.+.+...   ...+++.+|++.+++.+.|+...++   +..++.++.- 
T Consensus       280 t~gK~l-ggG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~G~  347 (451)
T PRK06062        280 TFAKGV-NSGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEE---GIVENAARIGA  347 (451)
T ss_pred             eechhh-hcCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence            679995 456 5899999865        577766432   2235677899999888888653222   2333333333 


Q ss_pred             HHHHHHhh----cCCCCcCCCCCCCceEEEEecCcccc-C-CC-C------CHHHHHHHHHhhcCeEEEcCCCCCCCCeE
Q 014936          317 DICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLL-D-DI-I------DDIDFCFKLAKEESVIILPGTAVGLKNWL  383 (415)
Q Consensus       317 ~~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~-~-~~-~------~~~~~~~~ll~~~gi~v~~g~~~~~~~~i  383 (415)
                      +++.+.|+    +.|.+. . ...-|+++-+.+..... . .. .      ....+... +.++||.+.+.     .+.+
T Consensus       348 ~~l~~~L~~l~~~~~~v~-~-vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gvl~~~~-----~~~l  419 (451)
T PRK06062        348 EVLGPGLRELAERHPSVG-E-VRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAA-CKERGLLPFVN-----GNRI  419 (451)
T ss_pred             HHHHHHHHHHHhcCCcEE-e-EeccccEEEEEEcccccccCCCcccchhhHHHHHHHHH-HHHCCcEEeec-----CCEE
Confidence            23444443    343222 1 23446666666532110 0 00 0      02244444 45679998653     3579


Q ss_pred             EEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          384 RVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       384 Ri~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      |+++  .++++++++++++|.++++++
T Consensus       420 rl~ppl~~t~~eid~~~~~l~~~l~~~  446 (451)
T PRK06062        420 HVVPPCTVTEDEVREGLAILDAALAVA  446 (451)
T ss_pred             EEECCccCCHHHHHHHHHHHHHHHHHh
Confidence            9988  579999999999999998754

>PRK06105 aminotransferase; Provisional

Probab=99.82  E-value=3.3e-17  Score=156.99  Aligned_cols=349  Identities=17%  Similarity=0.142  Sum_probs=211.8

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++||..|......+ -.+|++.+++++++....+ ....  ....+.+.++++.+.+..+  ..-+.++++++|+
T Consensus        45 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs  119 (460)
T PRK06105         45 DAGKRYIEGMAGLWSVALG-FSEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGS  119 (460)
T ss_pred             CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence            4588999998774222211 2478999999999875321 1111  0112344445555543222  2236899999999


Q ss_pred             HHHHHHHHHhc------C-CC-CEEEEcCCCCcchHHHHHhCCC-e------------EEEeeccCCCCCCC--------
Q 014936          111 QAIDVAMALLS------R-PG-ANILLPRPGFPIYELSAAFRHI-E------------VRHFDLLPDKGWEV--------  161 (415)
Q Consensus       111 ~al~~~~~~l~------~-~g-d~vi~~~p~y~~~~~~~~~~g~-~------------~~~~~~~~~~~~~~--------  161 (415)
                      +|++.+++...      . +| .+|+....+|++....+..... .            +..++..  +.+..        
T Consensus       120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~  197 (460)
T PRK06105        120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCP--HYYRFGLPGESEE  197 (460)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCC--cccccccCCCChH
Confidence            99999999852      1 22 5788888888876544322111 1            1111111  10000        


Q ss_pred             -----ChhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936          162 -----DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF  231 (415)
Q Consensus       162 -----~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  231 (415)
                           .++++++.+.   ....+.++..| +...|.. .|.+.++++.++|++||+++|.||++.++...|.... ...+
T Consensus       198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~-~~~~  276 (460)
T PRK06105        198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFG-CETF  276 (460)
T ss_pred             HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhh-HHhc
Confidence                 1345666552   23456677777 5555665 6889999999999999999999999987765554322 2223


Q ss_pred             CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHH
Q 014936          232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      +..++++   +++|.++...+++|.+++++        ++.+.+...        ...++..+|++..++.+.|+...+ 
T Consensus       277 ~v~PDi~---~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~-  344 (460)
T PRK06105        277 GIKPDIL---VMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE-  344 (460)
T ss_pred             CCCCCee---eeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh-
Confidence            3322233   67999654336899999865        677766531        123567888998888888765322 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCcccc--CCCCC----HHHHHHHHHhhcCeEEEcC
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLL--DDIID----DIDFCFKLAKEESVIILPG  374 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~----~~~~~~~ll~~~gi~v~~g  374 (415)
                        ++..++.++.-+++.+.|+++   |.+. . ...-|.+.-+++.....  .....    ...+... +.++||.+.+.
T Consensus       345 --~~l~~~v~~~g~~l~~~L~~l~~~~~v~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~-~~~~Gvl~~~~  419 (460)
T PRK06105        345 --RDLVGNAAERGARLQARLRALADHPLVG-E-VRGVGLIAAVELVADKATKTPFEPPGKVGARANAA-AHEHGVISRAM  419 (460)
T ss_pred             --ccHHHHHHHHHHHHHHHHHHhhcCCCeE-E-EEecceEEEEEEecCcccCCCCCchhHHHHHHHHH-HHHCCeEEEec
Confidence              134455555555555555543   3222 1 23446666666632110  00000    1234444 45779999873


Q ss_pred             CCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936          375 TAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       375 ~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                           .+.+|++..  .+++++++++++|.++++++..
T Consensus       420 -----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~  452 (460)
T PRK06105        420 -----GDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA  452 (460)
T ss_pred             -----CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence                 257999985  5899999999999999987654

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.82  E-value=2.2e-17  Score=138.13  Aligned_cols=323  Identities=14%  Similarity=0.155  Sum_probs=212.7

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCC--------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC
Q 014936           52 HTTHVATEAVAEALLSEKFNGYA--------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP  123 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y~--------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~  123 (415)
                      ..+++.++|+-+.-+.-....|.        ..+-+..+.+.+++|+        .-|.+-+|+|+.++=.+++.+++++
T Consensus        28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~   99 (382)
T COG1103          28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKE   99 (382)
T ss_pred             cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccC
Confidence            45677888887764431111221        1123567888899998        5789999999999999999999999


Q ss_pred             CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----C---CceEEEecCCCCccccCCCHHHHH
Q 014936          124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----Q---NTVALVIINPGNPCGNVYSYQHLQ  196 (415)
Q Consensus       124 gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~---~~~~v~i~~p~nptG~~~~~~~l~  196 (415)
                      ||.|+++..+|+...-+++..|+++..+|....-.+.+++|...+.++    +   .+.+.++++|...-|..   .+-+
T Consensus       100 gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dak  176 (382)
T COG1103         100 GDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAK  176 (382)
T ss_pred             CCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhH
Confidence            999999999999999999999999999997655568888887665553    2   25667899987767777   7899


Q ss_pred             HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH
Q 014936          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK  276 (415)
Q Consensus       197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~  276 (415)
                      +++++|++++++++..++|..    |..+.+....+.+   ++++|-+|++ ++.-++|.+..+.        ++.+..-
T Consensus       177 kva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKsm-AAs~PiGvl~~~e--------E~ae~V~  240 (382)
T COG1103         177 KVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKSM-AASAPIGVLAMSE--------EWAEIVL  240 (382)
T ss_pred             HHHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccch-hccCCeeEEeehh--------HHHHHHH
Confidence            999999999999999999987    4455555556655   8889999995 5555789988765        3333321


Q ss_pred             hhc---------cccCCc-hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC-CCCCceEEEEec
Q 014936          277 KYF---------DILGDP-ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH-KPEGSMAVMLKL  345 (415)
Q Consensus       277 ~~~---------~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~l  345 (415)
                      ...         .+-++. -......+.+.+-.  -...-++.+.--+.++++.+.|+++.|+.... .|..-  -++.+
T Consensus       241 r~Sg~~~~~KEvellGCT~rGapivTlmASfP~--V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~H--dLm~F  316 (382)
T COG1103         241 RRSGRAFPKKEVELLGCTVRGAPIVTLMASFPH--VVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNH--DLMKF  316 (382)
T ss_pred             hhcccccccceeeeecccccCchHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCccc--ceeee
Confidence            111         011111 00111111111110  01111223333456778899999886665332 23332  22223


Q ss_pred             CccccCCC----CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHHHHH
Q 014936          346 NLSLLDDI----IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       346 ~~~~~~~~----~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ..+.+..+    ....-|+.+-|++.||.   |.-.+...++.+|+ +.+.|+++..++.++++++++
T Consensus       317 etp~f~eIakk~~r~gyFlY~ELK~RgI~---GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky  381 (382)
T COG1103         317 ETPVFHEIAKKHKRKGYFLYEELKKRGIH---GIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY  381 (382)
T ss_pred             cCchHHHHHHhCcCCceeeHHHHHhcCcc---ccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence            32211000    01112334445677775   33334468999999 899999999999999998764

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.82  E-value=2.6e-17  Score=156.06  Aligned_cols=344  Identities=13%  Similarity=0.104  Sum_probs=210.2

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-.... --.+|++.+++++++.+..+....  .-..+.+..+|+.+....+  ...+.++++++|++
T Consensus        41 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse  115 (429)
T PRK06173         41 KDGRRLIDGMSSWWAALH-GYNHPRLNAAATNQLAKMSHIMFG--GFTHEPAVELAQKLLEILP--PSLNKIFFADSGSV  115 (429)
T ss_pred             CCCCEEEEccchHHhccC-CCCCHHHHHHHHHHHHhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCchH
Confidence            358889999776421111 124699999999988753221110  0012333444444433222  23469999999999


Q ss_pred             HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCC-----CCChh
Q 014936          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGW-----EVDLD  164 (415)
Q Consensus       112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~~~~  164 (415)
                      |++.+++....       +| .+|+....+|++....+... +.             .+..++.. ...+     .-+++
T Consensus       116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~l~  194 (429)
T PRK06173        116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQP-SIKFGEEWNDEAIE  194 (429)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCC-CcccchhHHHHHHH
Confidence            99999987541       23 57889999998854332211 10             01112211 0000     01355


Q ss_pred             HHHhhcC--CCceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936          165 DIESLAD--QNTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (415)
Q Consensus       165 ~l~~~~~--~~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  239 (415)
                      .+++.+.  ....+.++..|  +...|.. .|.+.++++.++|++||+++|+||++.++...|.... ...++..+.++ 
T Consensus       195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~PDiv-  272 (429)
T PRK06173        195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFA-LEHAGVVPDIM-  272 (429)
T ss_pred             HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchH-HHhcCCCCCEE-
Confidence            6667664  23456677777  5666765 7889999999999999999999999977654454321 12222222233 


Q ss_pred             EccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh-----h-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936          240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-----Y-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL  312 (415)
Q Consensus       240 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  312 (415)
                        +++|.+ ..| +.++.++.++        ++.+.+..     . ...++..++++.+++.+.|+...++   ...+++
T Consensus       273 --~~gK~l-~gG~~p~~a~~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~~~~  338 (429)
T PRK06173        273 --CIGKAL-TGGYLTLSATITTE--------AIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES---PWQQNI  338 (429)
T ss_pred             --Eeehhh-hCCccccceEEecH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHH
Confidence              489996 466 5788888765        56676642     1 1123457888888888888642211   345666


Q ss_pred             HHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--C
Q 014936          313 KQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--V  389 (415)
Q Consensus       313 ~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~  389 (415)
                      +++-+++.+.|+++.+...+ .....|+++-+.+...     .....+... +.++||.+.+..     +.+|+...  .
T Consensus       339 ~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~-----~~~~~i~~~-l~e~Gi~v~~~g-----~~l~~~Ppl~i  407 (429)
T PRK06173        339 QRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP-----VNMATLQPR-FVEHGIWVRPFG-----KLVYIMPPFII  407 (429)
T ss_pred             HHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc-----ccHHHHHHH-HHHCCeEEEecC-----CEEEEeCCccC
Confidence            77777777777643222211 1224577776767531     123445554 466799997742     58999884  6


Q ss_pred             ChhhHHHHHHHHHHHHHHH
Q 014936          390 DPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       390 ~~~~l~~~l~~l~~~~~~~  408 (415)
                      +++++++++++|.+++.+.
T Consensus       408 t~~ei~~~~~~l~~~l~~~  426 (429)
T PRK06173        408 SPDELSQLTSGLLRVLKQE  426 (429)
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999753

>PLN03032 serine decarboxylase; Provisional

Probab=99.81  E-value=7.8e-17  Score=148.88  Aligned_cols=311  Identities=14%  Similarity=0.082  Sum_probs=202.0

Q ss_pred             HHHHHHHHHHHhcCCCC---CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCEE
Q 014936           55 HVATEAVAEALLSEKFN---GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLS--RPGANI  127 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~---~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~i~~g~~~al~~~~~~l~--~~gd~v  127 (415)
                      ....+++.+.+.+...+   .+.......++++.+.+++.+.+|  .+++++  ++|+|||+++..++.+..  .++..|
T Consensus        37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~v  114 (374)
T PLN03032         37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGIL  114 (374)
T ss_pred             hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEE
Confidence            34566666665432111   111111336677777777766666  455666  999999999998887754  245689


Q ss_pred             EEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +++.-.|++....++..|.++..+|+++  ++.+|+++|++++++   ++.+++++..+|++|.+   +++++|+++|++
T Consensus       115 i~s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~  189 (374)
T PLN03032        115 YASRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKE  189 (374)
T ss_pred             EeCCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHH
Confidence            9999999999999999999988888854  456999999999976   46677888889999999   778888899999


Q ss_pred             cC-----cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc
Q 014936          205 LK-----TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF  279 (415)
Q Consensus       205 ~~-----~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~  279 (415)
                      +|     +++++|.+++++...-....+...+.... .-+..|.+|.++ ....+|.++.++        ...+.+....
T Consensus       190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~v-DSis~s~HK~~g-~P~g~G~ll~r~--------~~~~~~~~~~  259 (374)
T PLN03032        190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPI-GSVSVSGHKFLG-CPMPCGVALTRK--------KHVKALSQNV  259 (374)
T ss_pred             hCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCC-cEEEECcccccC-CCcCeEEEEEEc--------hhhHhhccCC
Confidence            86     58999999987543210000101111111 134558899854 334489998875        2333332110


Q ss_pred             ------ccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          280 ------DIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       280 ------~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                            ..+  ++-+......+...|.....+.+.+..++..++++++.+.|++. ++..+..|... .+.++-+     
T Consensus       260 ~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~-~V~f~~~-----  332 (374)
T PLN03032        260 EYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSS-TVVFERP-----  332 (374)
T ss_pred             cccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCce-EEEEcCC-----
Confidence                  011  12222333444444555556888999999999999999999987 66655556543 3433332     


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS  403 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~  403 (415)
                         ....    + . .|..+.+-     .+++|+++  ..+.+.++++++.|++
T Consensus       333 ---~~~~----~-~-~~w~l~~~-----~~~~hi~vm~~~~~~~id~fi~dl~~  372 (374)
T PLN03032        333 ---MDEA----F-I-KKWQLACE-----GDIAHVVVMPNVTVEKLDEFVEELVE  372 (374)
T ss_pred             ---CcHh----H-h-heeeeccc-----CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence               1111    2 2 25555432     35899999  3577888998888764

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.81  E-value=7e-17  Score=154.08  Aligned_cols=350  Identities=16%  Similarity=0.125  Sum_probs=209.9

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++||..|.-...  ++ .+|.+.+++++++..-.+  ++......+....+++.+.+..+  ...+.++++++|+
T Consensus        46 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGs  119 (445)
T PRK09221         46 ADGRKILDGTAGLWCCN--AGHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGS  119 (445)
T ss_pred             CCCCEEEEccccHhhcc--CCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence            35889999987742221  22 578999999998875221  11100112334445555543222  1246899999999


Q ss_pred             HHHHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccC---CCCCCC-----
Q 014936          111 QAIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP---DKGWEV-----  161 (415)
Q Consensus       111 ~al~~~~~~l~~-------~-gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~-----  161 (415)
                      +|++.+++....       + -.+|+....+|++....+...+.             .+..++...   ...+..     
T Consensus       120 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (445)
T PRK09221        120 ESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEH  199 (445)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHH
Confidence            999999987541       1 24799999999876544322111             112222110   000000     


Q ss_pred             ---ChhHHHhhcCC---CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          162 ---DLDDIESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       162 ---~~~~l~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                         .++.+++.++.   ...+.++..| ....|.. .+.+.++++.++|+++|+++|+||++.++...|.... ...++.
T Consensus       200 ~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~-~~~~gv  278 (445)
T PRK09221        200 GAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFA-AERFGV  278 (445)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhH-HHhcCC
Confidence               13466666642   3455666777 5566775 5778899999999999999999999987655554321 122222


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHH
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      .+.+   .+++|.++...+++|.+++++        ++.+.+...        ...+++.++++..++.+.|+...+   
T Consensus       279 ~PDi---~~~gK~l~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~---  344 (445)
T PRK09221        279 TPDI---ITFAKGLTNGAIPMGAVIASD--------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE---  344 (445)
T ss_pred             CCCE---EEeccccccCcccceeeEEcH--------HHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh---
Confidence            2222   367999644447899998865        566665321        123556788888888887764321   


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcCCC-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936          306 KKTLNLLKQSVDICYNKIKEIPCISCPH-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR  384 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR  384 (415)
                      +...++.+++.+++.+.|+++.....+. ...-|++.-+.+............++...+ .++||.+.++.     +.+|
T Consensus       345 ~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~~-----~~lr  418 (445)
T PRK09221        345 EDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKC-FEKGLLVRYTG-----DTIA  418 (445)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHH-HHCCeEEeecC-----CEEE
Confidence            2345677777777777776652221111 223455555555321110001123455554 56799997642     5799


Q ss_pred             EEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          385 VTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       385 i~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +++  ..+++++++++++|.+++.++
T Consensus       419 ~~Ppl~~t~~eid~~~~~l~~~l~~~  444 (445)
T PRK09221        419 LSPPLIIEKAQIDELVDALGDALRAV  444 (445)
T ss_pred             EECCccCCHHHHHHHHHHHHHHHHhh
Confidence            997  478999999999999998753

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.81  E-value=2.4e-16  Score=146.33  Aligned_cols=307  Identities=17%  Similarity=0.145  Sum_probs=203.1

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HHhCCCeEEE
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRH  150 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-~~~~g~~~~~  150 (415)
                      .|.....+.+|++.+++++        ..+.++.+++|+.|+.+++...+++||.|  +..+|...... ....|+....
T Consensus        73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvD  142 (460)
T PRK13237         73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVD  142 (460)
T ss_pred             hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEe
Confidence            5777678899999999998        45679999999999998877778999965  55545443333 5667775444


Q ss_pred             eecc--------CCCCCCCChhHHHhhcCCC----ceEEEecCCCCcc-ccCCCHHHHHHHHHHHhhcCcEEEEccccCC
Q 014936          151 FDLL--------PDKGWEVDLDDIESLADQN----TVALVIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGH  217 (415)
Q Consensus       151 ~~~~--------~~~~~~~~~~~l~~~~~~~----~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~  217 (415)
                      +..+        ....+.+|+++|+++++++    +.++.+.+++|.. |+..|.++++++.++|++||+.+|+|.++..
T Consensus       143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~  222 (460)
T PRK13237        143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV  222 (460)
T ss_pred             eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence            4211        1235779999999998753    2356777787877 7999999999999999999999999999976


Q ss_pred             cc----------cCCCCcc----cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc--
Q 014936          218 LV----------FGDKPFV----PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--  281 (415)
Q Consensus       218 ~~----------~~~~~~~----~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--  281 (415)
                      ..          +.+....    .+.++..    +++.|++|.++.+-  .|++++++       +++.++++...-.  
T Consensus       223 gna~fI~~re~~y~~~~i~ei~~e~~s~aD----~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~~~~e  289 (460)
T PRK13237        223 ENAYFIKEREEGYQDKSIKEIVHEMFSYAD----GCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELVVVYE  289 (460)
T ss_pred             cChhhhcccccccCCCcHhHHhhhccCcCc----EEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhccccC
Confidence            42          1111110    1122222    56678999976652  37777655       4688888766221  


Q ss_pred             ---c-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc----cccCCC
Q 014936          282 ---L-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL----SLLDDI  353 (415)
Q Consensus       282 ---~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~----~~~~~~  353 (415)
                         + ++.+.--..+++..|.+..+.   ....+...+.++|.+.|.+. |+. +..|.+|.-++++...    -+... 
T Consensus       290 G~~tygg~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~-Gvp-v~~p~ggH~v~vda~~~lph~~~~~-  363 (460)
T PRK13237        290 GMPSYGGMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAA-GVP-IVEPVGGHAVFLDARRFLPHLPQDQ-  363 (460)
T ss_pred             CCcCCCChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHC-CCc-eecCCCceEEEEEhHHhCCCCCccc-
Confidence               1 222222444555445443221   33344444567777777776 888 4478999888875422    11111 


Q ss_pred             CCHHHHHHHHHhhcCeEEE-cCCC-CCC-----------CCeEEEEee---CChhhHHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIIL-PGTA-VGL-----------KNWLRVTFA---VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~-~g~~-~~~-----------~~~iRi~~~---~~~~~l~~~l~~l~~~~~~  407 (415)
                      .....+..+|-.+.||-.. -|+. ++.           -.-+|+++.   .+.+.++...++|..+.++
T Consensus       364 ~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~  433 (460)
T PRK13237        364 FPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH  433 (460)
T ss_pred             ChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence            1466777888778888542 3333 111           146999993   5889999999999988775

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.81  E-value=3.6e-17  Score=154.98  Aligned_cols=340  Identities=15%  Similarity=0.098  Sum_probs=207.1

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++||..|.-...  ++ .+|++.++++++++...+..+..  -..+....+|+.+.+..+  ..-+.++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~--lGh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs  110 (422)
T PRK05630         37 EDGSTVIDAMSSWWSAA--HGHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDSGS  110 (422)
T ss_pred             CCCCEEEEcchhHHHhc--CCCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcH
Confidence            45889999987753221  22 47899999999987633221111  012333444444443222  1246999999999


Q ss_pred             HHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-CC-------------eEEEeeccCCCCCCC-C----h
Q 014936          111 QAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEV-D----L  163 (415)
Q Consensus       111 ~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~-~----~  163 (415)
                      +|++.+++....       ++ .+|+....+|++....+... +.             ....+|......... +    .
T Consensus       111 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  190 (422)
T PRK05630        111 VSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYL  190 (422)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHH
Confidence            999999987541       23 57999999999865544322 11             112222211100000 1    2


Q ss_pred             hHHHhhcCCCceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936          164 DDIESLADQNTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (415)
Q Consensus       164 ~~l~~~~~~~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (415)
                      +.+++.+.. ..+.+|..|  +...|.. .+.+.++++.++|++||+++|+||++.++...|.... ...++..+.++  
T Consensus       191 ~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~PDi~--  266 (422)
T PRK05630        191 RSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFA-TLAAGVTPDIM--  266 (422)
T ss_pred             HHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhH-HHhcCCCCCee--
Confidence            344554543 445566666  5666774 6778999999999999999999999987655443221 12222222233  


Q ss_pred             ccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936          241 GSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL  312 (415)
Q Consensus       241 ~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  312 (415)
                       +++|.+ ..| ..+|++++++        ++.+.+...       ...++..+++...++.+.|+...++   ...+++
T Consensus       267 -t~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~---~~~~~~  333 (422)
T PRK05630        267 -CVGKAL-TGGFMSFAATLCTD--------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETG---MWRKQV  333 (422)
T ss_pred             -eeechh-hcCccccceeeccH--------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhC---cHHHHH
Confidence             679984 346 5789999865        576666421       1235678888888888887653222   233455


Q ss_pred             HHHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-
Q 014936          313 KQSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-  388 (415)
Q Consensus       313 ~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-  388 (415)
                      +++.+++.+.|+.   .|.+. . ...-|+++-+.+...     .+...+... +.++|+.+.+.     .+.+|+... 
T Consensus       334 ~~~g~~l~~~L~~l~~~~~v~-~-vRg~Gl~~~ie~~~~-----~~~~~~~~~-~~~~Gl~~~~~-----g~~l~~~PpL  400 (422)
T PRK05630        334 KRIEAELIAGLSPLAHLPGVA-D-VRVLGAIGVVEMEQP-----VDMEEATQA-AVDHGVWLRPF-----GRLVYVMPPY  400 (422)
T ss_pred             HHHHHHHHHHHHHhhcCCCee-e-eeccccEEEEEECCc-----ccHHHHHHH-HHHCCeEEEec-----CCEEEEECCc
Confidence            5555555555554   33332 1 234477777777431     123445444 46679999763     257899884 


Q ss_pred             -CChhhHHHHHHHHHHHHHH
Q 014936          389 -VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       389 -~~~~~l~~~l~~l~~~~~~  407 (415)
                       .+++++++++++|.+++++
T Consensus       401 ~it~~~i~~~~~~l~~al~~  420 (422)
T PRK05630        401 ITTSEQIAQICAALAAAVKA  420 (422)
T ss_pred             cCCHHHHHHHHHHHHHHHhc
Confidence             7899999999999998864

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.81  E-value=7.8e-17  Score=154.25  Aligned_cols=353  Identities=14%  Similarity=0.052  Sum_probs=212.1

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC---CCCCcEEEeCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK---LTPNDVFVTSG  108 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~---~~~~~i~i~~g  108 (415)
                      .+++.++|+..|.-.... --.+|.+.+++++++..-... .. ..-..+.+..+++.+.+..+..   -..+.++++++
T Consensus        61 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~q~~~l~~~-~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s  137 (472)
T PRK08742         61 HDGRRYLDAVSSWWTNLF-GHAEPRIGAAIAAQAGELEQV-ML-AGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN  137 (472)
T ss_pred             CCCCEEEEcCccHHhccC-CCCCHHHHHHHHHHHHhCCCc-cc-cccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence            347889999777422111 124789999999987642111 00 0011234555666655433211   12369999999


Q ss_pred             hHHHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCC--CCCC----
Q 014936          109 CTQAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDK--GWEV----  161 (415)
Q Consensus       109 ~~~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~----  161 (415)
                      |++|++.+++....       +| .+|+....+|++....+...+..             +..++.....  .++.    
T Consensus       138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~  217 (472)
T PRK08742        138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED  217 (472)
T ss_pred             chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence            99999999988631       22 57999999999876554433211             1112211000  0011    


Q ss_pred             ----ChhHHHhhcC--CCceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          162 ----DLDDIESLAD--QNTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       162 ----~~~~l~~~~~--~~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                          +++.+++.+.  ....+.+|..|  ++..|. ..|.+.++++.++|+++|+++|.||++.++...|.... ...++
T Consensus       218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a-~e~~g  296 (472)
T PRK08742        218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFA-CEQAG  296 (472)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchH-HHhcC
Confidence                2455666663  23456677777  556676 46889999999999999999999999998876664322 22233


Q ss_pred             CCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936          233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQAAVPSILQQPDEVF  304 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~  304 (415)
                      ..+.++   +++|.+ ..| +++|.+++++        ++.+.+...       ...+++.++++.+++.+.|+...++.
T Consensus       297 v~PDiv---~~gKgl-~gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~  364 (472)
T PRK08742        297 VMPDLL---CLSKGL-TGGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDD  364 (472)
T ss_pred             CCCCEE---EEcccc-cCCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCC
Confidence            333344   468994 556 4899999865        676665421       12356678999999888887543333


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC--CCCC----HHHHHHHHHhhcCeEEEcCCCCC
Q 014936          305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD--DIID----DIDFCFKLAKEESVIILPGTAVG  378 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~--~~~~----~~~~~~~ll~~~gi~v~~g~~~~  378 (415)
                      +.++.+++.+....+.+.+++.|.+. . ...-|+++-+.+......  ....    ...+... +.++||.+.+..   
T Consensus       365 l~~~~~~~g~~l~~~~~~~~~~~~i~-d-vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~g---  438 (472)
T PRK08742        365 VIARNQPTAARMTQLAAQIGEHPHVA-D-VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRA-ALARGVVLRPLG---  438 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCee-e-EeccceEEEEEeccCccccccCCchhHHHHHHHHH-HHHCCeEEEecC---
Confidence            32333333332223333444554433 1 345577777766421100  0000    1233444 456799997632   


Q ss_pred             CCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          379 LKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       379 ~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                        +.|||...  .+++++++++++|.+++++.
T Consensus       439 --~vi~~~PpL~it~~ei~~~~~~l~~~l~~~  468 (472)
T PRK08742        439 --DVLYWMPPYCVDEAQLALLADTTRHAIDEA  468 (472)
T ss_pred             --CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence              67999884  68999999999999999864

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.81  E-value=8.5e-17  Score=153.29  Aligned_cols=343  Identities=15%  Similarity=0.065  Sum_probs=205.9

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++|+..|.-.... --.+|.+.+++.+++.......++.     +.+..+++.+.+..+   ..+.++++++|++
T Consensus        50 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~~-----~~~~~la~~l~~~~p---~~~~v~f~~sGse  120 (428)
T PRK12389         50 VDGNKYIDYLAAYGPIIT-GHAHPHITKAITEAAENGVLYGTPT-----ELEIEFAKMLKEAIP---SLEKVRFVNSGTE  120 (428)
T ss_pred             CCCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCccCCCC-----HHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence            358889999877532211 1247999999999988644322222     334445555543222   2469999999999


Q ss_pred             HHHHHHHHhcC-C-CCEEEEcCCCCcchHHHHHhC-CCeEE--------EeeccC-CCC---CCCChhHHHhhcCC--Cc
Q 014936          112 AIDVAMALLSR-P-GANILLPRPGFPIYELSAAFR-HIEVR--------HFDLLP-DKG---WEVDLDDIESLADQ--NT  174 (415)
Q Consensus       112 al~~~~~~l~~-~-gd~vi~~~p~y~~~~~~~~~~-g~~~~--------~~~~~~-~~~---~~~~~~~l~~~~~~--~~  174 (415)
                      |++.+++.... . -.+|+...-+|++....+... |....        .++... .+.   .-.|++.+++.++.  ..
T Consensus       121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  200 (428)
T PRK12389        121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE  200 (428)
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence            99999987641 2 257888899999876554332 21110        000000 000   01267888877753  23


Q ss_pred             eEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          175 VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       175 ~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      .+.++..| .+..|.+ .+.+.+++|.++|+++|+++|.||++.++ ..+... ....++..+++   .+++|.+ ..|+
T Consensus       201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~-a~~~~gv~PDi---vt~gK~l-ggG~  274 (428)
T PRK12389        201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGG-AQDLLGVEPDL---TALGKII-GGGL  274 (428)
T ss_pred             EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcch-hhHHhCCCCCe---eeechhh-cCCC
Confidence            45666777 5556765 56888999999999999999999999987 332211 11112222223   3789995 5679


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHh---h-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc---
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKK---Y-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE---  325 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~---  325 (415)
                      ++|.+++++        ++.+.+..   . ...++..+|++.+++.+.|+...++   +..++++++-+++.+.|++   
T Consensus       275 Pi~av~~~~--------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~  343 (428)
T PRK12389        275 PIGAYGGRK--------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAE  343 (428)
T ss_pred             ceeEEeEHH--------HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHH
Confidence            999998865        67776642   1 2235577899988888888653221   2444555555555555543   


Q ss_pred             -CCCCcCCCCCCCceEEEEecCccccCCC-----CC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936          326 -IPCISCPHKPEGSMAVMLKLNLSLLDDI-----ID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       326 -~~~~~~~~~p~~g~~~~~~l~~~~~~~~-----~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~  396 (415)
                       .|.+. ......|++ -+.+........     .+   ...+... +.++||.+.+..    .+.+.+++.++++++++
T Consensus       344 ~~~~~~-~v~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~~----~~~~~~~l~~t~e~id~  416 (428)
T PRK12389        344 KHGITI-TINRLKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKL-MLNQGINLAPSK----YEAWFLTTAHTEEDIEE  416 (428)
T ss_pred             hCCCCE-EEEecCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHH-HHHCCcEeecCC----CCCeeecCCCCHHHHHH
Confidence             43211 111233433 233322110000     01   2234444 456799998753    13356677789999999


Q ss_pred             HHHHHHHHHHH
Q 014936          397 CLDRIKSFYQR  407 (415)
Q Consensus       397 ~l~~l~~~~~~  407 (415)
                      +++++.+++++
T Consensus       417 ~~~~l~~~l~~  427 (428)
T PRK12389        417 TLEAVDRAFAQ  427 (428)
T ss_pred             HHHHHHHHHHh
Confidence            99999998864

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.80  E-value=3.2e-17  Score=155.37  Aligned_cols=346  Identities=14%  Similarity=0.019  Sum_probs=204.2

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++|+..|.-.... --.+|.+.+++++++.......+..     +.+..+++.+.+..+  ...+.++++++|++
T Consensus        50 ~dG~~yiD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~~-----~~~~~la~~L~~~~~--~~~~~v~f~~SGsE  121 (433)
T PRK00615         50 SLGKTFIDFCGSWGSLIH-GHSHPKICDAIQQGAERGTSYGLTS-----EQEILFAEELFSYLG--LEDHKIRFVSSGTE  121 (433)
T ss_pred             CCCCEEEEcccchhcccc-CCCCHHHHHHHHHHHHhCCCCCCCC-----HHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence            358889999877532211 1247999999999987643222222     233444444443222  12368999999999


Q ss_pred             HHHHHHHHhcC-CC-CEEEEcCCCCcchHHH---HHhCCCeE-----EEeeccCCCC-----CCCChhHHHhhcCC--Cc
Q 014936          112 AIDVAMALLSR-PG-ANILLPRPGFPIYELS---AAFRHIEV-----RHFDLLPDKG-----WEVDLDDIESLADQ--NT  174 (415)
Q Consensus       112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~---~~~~g~~~-----~~~~~~~~~~-----~~~~~~~l~~~~~~--~~  174 (415)
                      |++.+++.... .| .+|+....+|++....   +...+...     ......+...     .-.|++.+++.+..  ..
T Consensus       122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  201 (433)
T PRK00615        122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHR  201 (433)
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCc
Confidence            99999987641 23 5788889899886522   11111000     0000000000     00267888877742  23


Q ss_pred             eEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          175 VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       175 ~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      .+.+++.| ....|.. .+.+.+++|.++|++||+++|+||++.++ ..|.. .....++..+.++   +++|.++ .|+
T Consensus       202 ~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~-ga~~~~gv~PDi~---~~gK~lg-gG~  275 (433)
T PRK00615        202 VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQG-GAAAIYHVKPDIT---VYGKILG-GGL  275 (433)
T ss_pred             eEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHh-HHHHhcCCCCCeE---EEccccc-CCc
Confidence            45667777 4455765 46788999999999999999999999766 33321 1112222222233   5799964 568


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh----
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK----  324 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----  324 (415)
                      .+|++++++        ++++.+...    ...++..+++..+++.+.|+...+   ++..++++++.+++.+.|+    
T Consensus       276 p~~av~~~~--------~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~---~~~~~~~~~~g~~l~~~l~~~~~  344 (433)
T PRK00615        276 PAAAVVAHK--------SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE---QGFYTQLSTLEQNFLSPIEEMIR  344 (433)
T ss_pred             ceeeeeecH--------HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHH
Confidence            899999865        677776432    122445688888888888865322   1234444444455544443    


Q ss_pred             cCCCCcCCCCCCCceEEEEecCccccCCC--------CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936          325 EIPCISCPHKPEGSMAVMLKLNLSLLDDI--------IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~--------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~  396 (415)
                      +. ++.+.... -|.++.+.+......+.        .....+..++ .++||.+.|.....    .=++..+++++|++
T Consensus       345 ~~-g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~----~~ls~~ht~~did~  417 (433)
T PRK00615        345 SQ-GFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSA-FSKGVYLSPSPFEA----SFLSSAHSMENLDY  417 (433)
T ss_pred             Hc-CCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHH-HHCCeeecCccccc----cceecCCCHHHHHH
Confidence            32 22211122 46666666643211000        0122455555 55799998764311    13566789999999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRHA  409 (415)
Q Consensus       397 ~l~~l~~~~~~~~  409 (415)
                      +++.+.+++++..
T Consensus       418 ~~~a~~~~~~~~~  430 (433)
T PRK00615        418 AQNVLIDSLEKVF  430 (433)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998753

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.80  E-value=8.1e-17  Score=141.12  Aligned_cols=293  Identities=16%  Similarity=0.161  Sum_probs=196.4

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~  152 (415)
                      +....|++.||..=        ..-.-+.+++|++|+..++..+.++||+|+..+--|.+...    .++.+|+++..++
T Consensus        62 PT~~vlE~RiAaLE--------GG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd  133 (426)
T COG2873          62 PTTDVLEERIAALE--------GGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD  133 (426)
T ss_pred             chHHHHHHHHHHhh--------cchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence            45678999999874        22345677888999999999999999999999988886544    4578899999885


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      .       .|++.++++++++||+|++..-.||.+.+   -++++|+++|+++++++|+|...+.-.    ...|+ ..+
T Consensus       134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v---~Die~ia~iAh~~gvpliVDNT~atpy----l~rP~-~hG  198 (426)
T COG2873         134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDV---LDIEAIAEIAHRHGVPLIVDNTFATPY----LCRPI-EHG  198 (426)
T ss_pred             C-------CCHHHHHHHhCcccceEEEEeccCCCccc---cCHHHHHHHHHHcCCcEEEecCCCcce----ecchh-hcC
Confidence            3       37999999999999999999999999999   568889999999999999999987521    11222 223


Q ss_pred             CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC-------------------------hHHHHHHHHh--hccccCCc
Q 014936          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-------------------------KPKVVERMKK--YFDILGDP  285 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-------------------------~~~~~~~~~~--~~~~~~~~  285 (415)
                      .+   |++.|++|..+..|.-+|.+++..-.+-+.                         .+.++-+.+.  .+....+.
T Consensus       199 AD---IVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l  275 (426)
T COG2873         199 AD---IVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL  275 (426)
T ss_pred             CC---EEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc
Confidence            33   889999999999999999998854332221                         0001111111  12223344


Q ss_pred             hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-----------------CceEEEEecCcc
Q 014936          286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-----------------GSMAVMLKLNLS  348 (415)
Q Consensus       286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-----------------~g~~~~~~l~~~  348 (415)
                      +|.....+..-|+.     +.-+.++..++...+.+.|+..|.+..+.+|.                 .|-.+.+.+...
T Consensus       276 sPfnAfl~lqGlET-----L~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg  350 (426)
T COG2873         276 SPFNAFLLLQGLET-----LSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGG  350 (426)
T ss_pred             CcHHHHHHHhchhh-----hHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecCh
Confidence            44444444444433     56677888889999999999888776554442                 233444555421


Q ss_pred             ccCCCCCHHHHHHHHH-----h----hcCeEEEcCCCCCC-------------CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          349 LLDDIIDDIDFCFKLA-----K----EESVIILPGTAVGL-------------KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       349 ~~~~~~~~~~~~~~ll-----~----~~gi~v~~g~~~~~-------------~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                          .+...+++..+-     .    .+-+.+.|.+....             ++.||+|++.  |+++.++..|+++++
T Consensus       351 ----~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl~  424 (426)
T COG2873         351 ----YEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQALE  424 (426)
T ss_pred             ----HHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHHh
Confidence                112234433330     1    12345556544221             6789999986  355666666666654

>PLN02271 serine hydroxymethyltransferase

Probab=99.80  E-value=1.9e-16  Score=149.26  Aligned_cols=346  Identities=14%  Similarity=0.052  Sum_probs=221.3

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEe
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVT  106 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~i~  106 (415)
                      ..-++|-...      ...++.+.+++-..+.+....+|+      -...+.+++....+...+.++.....  .+|...
T Consensus       148 ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~  221 (586)
T PLN02271        148 FKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY  221 (586)
T ss_pred             hcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence            3456665544      345788888887776643322332      22334456555555555545432211  344444


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---------HhCCCeEEE--eeccCCCCCCCChhHHHh-hcCCCc
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA---------AFRHIEVRH--FDLLPDKGWEVDLDDIES-LADQNT  174 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~---------~~~g~~~~~--~~~~~~~~~~~~~~~l~~-~~~~~~  174 (415)
                       +|+.|+.+++.++++|||+|+..+..|.++....         ...|..+..  ++++++ ...+|.+++++ +...++
T Consensus       222 -SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~rP  299 (586)
T PLN02271        222 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDFRP  299 (586)
T ss_pred             -cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhcCC
Confidence             7788889999999999999999888777654322         334544443  445433 34699999998 667789


Q ss_pred             eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccCCCCce
Q 014936          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      ++|++....+|  ..+   +++++.++|+++|+++++|.+|..+...+... .++..  .   -++.+|.+|+  +.|.|
T Consensus       300 KLII~g~Sayp--r~~---D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~--a---Dvvt~TTHKt--LrGPr  367 (586)
T PLN02271        300 KILICGGSSYP--REW---DYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY--C---DIVTSTTHKS--LRGPR  367 (586)
T ss_pred             eEEEECchhcc--CcC---CHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC--C---cEEEeCCccc--CCCCC
Confidence            98888776777  343   36677777889999999999998866554322 22221  2   2788899999  55666


Q ss_pred             EEEEEeeCCCC------------CCChHHHHHHHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936          254 LGWFVTTDPCG------------MFRKPKVVERMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       254 ~G~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  319 (415)
                      .|.+.+++...            ....+++.+++......  .+++.....++++.+++......++...+++.++.+.|
T Consensus       368 GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaL  447 (586)
T PLN02271        368 GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQAL  447 (586)
T ss_pred             ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence            78888854210            00123455666554321  23333333555555565433344588999999999999


Q ss_pred             HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----CCCeEEEEe------e
Q 014936          320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----LKNWLRVTF------A  388 (415)
Q Consensus       320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~------~  388 (415)
                      .+.|.+. |+.++........+++++....     .....++..|++.||.+.--..++     .++.|||+.      +
T Consensus       448 A~~L~~~-G~~vv~ggTdnHlvLvDl~~~g-----~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG  521 (586)
T PLN02271        448 ASALLRR-KCRLVTGGTDNHLLLWDLTTLG-----LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRG  521 (586)
T ss_pred             HHHHHHC-CCeEeeCCCCcceeeecCcccC-----CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcC
Confidence            9999987 8885544455677888875421     134556777889999985443332     257899998      2


Q ss_pred             CChhhHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~  406 (415)
                      ..++++++..+.|.++++
T Consensus       522 ~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        522 CLESDFETIADFLLRAAQ  539 (586)
T ss_pred             CCcHHHHHHHHHHHHHHh
Confidence            456888888888887766

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.80  E-value=1.1e-16  Score=152.94  Aligned_cols=343  Identities=16%  Similarity=0.096  Sum_probs=204.2

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-.... --.+|.+.+++++++.....  +..+   .+.+..+|+.+.+..+   ..+.+.++++|++
T Consensus        96 ~dG~~yiD~~~g~g~~~l-Gh~~p~v~~av~~ql~~~~~--~~~~---~~~~~~lAe~l~~~~p---~~~~v~f~~SGsE  166 (474)
T PLN02482         96 VDGNEYIDYVGSWGPAII-GHADDEVLAALAETMKKGTS--FGAP---CLLENVLAEMVIDAVP---SVEMVRFVNSGTE  166 (474)
T ss_pred             CCCCEEEEeccccccccc-CCCCHHHHHHHHHHHhhCCC--CCCC---CHHHHHHHHHHHHhCC---CCCEEEEeCChHH
Confidence            348889999777522111 12478999999999986543  2221   2455566666654333   2479999999999


Q ss_pred             HHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHh-C--CCeE------EEeeccCC-----CCCCCChhHHHhhcCC--C
Q 014936          112 AIDVAMALLSR-PG-ANILLPRPGFPIYELSAAF-R--HIEV------RHFDLLPD-----KGWEVDLDDIESLADQ--N  173 (415)
Q Consensus       112 al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~-~--g~~~------~~~~~~~~-----~~~~~~~~~l~~~~~~--~  173 (415)
                      |++.+++.... .| .+|+....+|+++...+.. .  +...      ..++....     ..+ -|++.+++.++.  .
T Consensus       167 A~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~  245 (474)
T PLN02482        167 ACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKG  245 (474)
T ss_pred             HHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCC
Confidence            99999988641 22 5789999999986543211 0  0000      00000000     011 267888887753  3


Q ss_pred             ceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936          174 TVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (415)
Q Consensus       174 ~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  251 (415)
                      ..+.++..| ....|.+. +.+.+++|.++|++||+++|+||++.++ ..+.. .....++....+   .+++|.++ .|
T Consensus       246 ~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~-ga~~~~gv~PDi---~t~gK~lg-gG  319 (474)
T PLN02482        246 EIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG-GAQEYFGITPDL---TTLGKVIG-GG  319 (474)
T ss_pred             ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc-hHhHHhCCCCCE---EEecchhh-CC
Confidence            455677777 45567664 5788999999999999999999999876 44332 112223322223   37799964 78


Q ss_pred             ceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                      +++|.+++++        ++++.+...    ...++..++++..++.+.|+...+   ++..++++++-+++.+.|+++.
T Consensus       320 ~Pigav~g~~--------ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~  388 (474)
T PLN02482        320 LPVGAYGGRR--------EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAG  388 (474)
T ss_pred             CceEEEEEcH--------HHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH
Confidence            9999998865        677776421    122445788888888887765321   2344555555555555555430


Q ss_pred             ---CCcCCCCCCCceEEEEecCcccc---CC--CCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936          328 ---CISCPHKPEGSMAVMLKLNLSLL---DD--IID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       328 ---~~~~~~~p~~g~~~~~~l~~~~~---~~--~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~  396 (415)
                         ++........|++ -+.+.....   .+  ..+   ...+...+ .++||.+.|...   +.+ -+++.+++++|++
T Consensus       389 ~~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~Gv~~~~~~~---~~~-~psl~ht~~dId~  462 (474)
T PLN02482        389 KKAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGM-LEEGVYLAPSQF---EAG-FTSLAHTEEDIDF  462 (474)
T ss_pred             HhcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHH-HHCCeEEeccCC---CCC-cCCCCCCHHHHHH
Confidence               2221111223333 222211100   00  001   22445554 467999987432   111 1566789999999


Q ss_pred             HHHHHHHHHHH
Q 014936          397 CLDRIKSFYQR  407 (415)
Q Consensus       397 ~l~~l~~~~~~  407 (415)
                      +++++.+++++
T Consensus       463 ~l~al~~~l~~  473 (474)
T PLN02482        463 TIAAAERVLAR  473 (474)
T ss_pred             HHHHHHHHHHh
Confidence            99999998864

>PRK06149 hypothetical protein; Provisional

Probab=99.80  E-value=1.1e-16  Score=166.23  Aligned_cols=345  Identities=16%  Similarity=0.115  Sum_probs=206.7

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+|+.++||..|..    .++ .+|++.+++.+++...... .|.. ....++.+.+++.+      +...+.++++++|
T Consensus       582 ~dG~~ylD~~~~~~----~lGh~hp~v~~Ai~~q~~~l~~~~~~~~-~~~~elae~L~~~~------p~~~~~v~f~~SG  650 (972)
T PRK06149        582 MAGRSYLDMVNNVT----VLGHGHPRLAAAAARQWSLLNTNSRFHY-AAVAEFSERLAALA------PDGLDTVFLVNSG  650 (972)
T ss_pred             CCCCEEEECCCCcc----ccCCCCHHHHHHHHHHHHhccccccccC-HHHHHHHHHHHHhC------CCCcCEEEEeCCc
Confidence            34788999987653    244 6899999999988753321 1211 22344444454443      1224689999999


Q ss_pred             HHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-C-----C--------eEEEeeccCC--CCCC-CC-----hhH
Q 014936          110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-H-----I--------EVRHFDLLPD--KGWE-VD-----LDD  165 (415)
Q Consensus       110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g-----~--------~~~~~~~~~~--~~~~-~~-----~~~  165 (415)
                      ++|++.+++...  .....|+...-+|++....+... +     .        .+..++....  ..+. .+     .+.
T Consensus       651 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~  730 (972)
T PRK06149        651 SEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRD  730 (972)
T ss_pred             hHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHH
Confidence            999999998532  12256888888888655333111 0     0        0111211100  0011 11     233


Q ss_pred             HHhhcC-----CCceEEEecCC-CCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936          166 IESLAD-----QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (415)
Q Consensus       166 l~~~~~-----~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  238 (415)
                      +++.++     ....+.+|+.| ....| ...|.+.++++.++|++||+++|.||++.++...|.....+..++....++
T Consensus       731 ~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv  810 (972)
T PRK06149        731 VVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII  810 (972)
T ss_pred             HHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE
Confidence            333221     23456677777 33345 457888999999999999999999999987765554322233333333333


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh--hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                         +++|.+ ..|+.+|++++++        ++.+.+..  ....+.+.++++.+++.+.|+...++   +..++.++.-
T Consensus       811 ---t~gK~l-g~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e---~l~~~~~~~G  875 (972)
T PRK06149        811 ---TMAKGM-GNGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREE---KLQENARRVG  875 (972)
T ss_pred             ---Eecccc-cCCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence               679995 4679999999976        67776653  12234577899999998888653222   3344444444


Q ss_pred             HHHHHHhhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-
Q 014936          317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-  388 (415)
Q Consensus       317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-  388 (415)
                      +++.+.|++    .|.+. . ...-|+++-+.+.....   +.......+...+ .++||.+.+....  .+.+||... 
T Consensus       876 ~~l~~~L~~l~~~~~~i~-~-vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l-~~~Gvl~~~~g~~--~~vl~~~Ppl  950 (972)
T PRK06149        876 DHLKARLEALADRHPLIG-A-VHGMGLYLGVELVRDRQTLEPATEETAAICDRL-LELGVIMQPTGDH--LNILKIKPPL  950 (972)
T ss_pred             HHHHHHHHHHHHhCCCeE-E-EeecceEEEEEEecCcccCCCChHHHHHHHHHH-HhCCeEEeecCCC--CCEEEEECCC
Confidence            555555543    43332 1 34557777766632100   0000123444444 5679999874321  367998884 


Q ss_pred             -CChhhHHHHHHHHHHHHHH
Q 014936          389 -VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       389 -~~~~~l~~~l~~l~~~~~~  407 (415)
                       .++++++.++++|.+++.+
T Consensus       951 ~it~~~id~~~~~l~~~l~~  970 (972)
T PRK06149        951 CLDRESADFFVDMLDRVLTE  970 (972)
T ss_pred             cCCHHHHHHHHHHHHHHHHh
Confidence             7999999999999999864

>PRK07481 hypothetical protein; Provisional

Probab=99.80  E-value=1.9e-16  Score=151.49  Aligned_cols=350  Identities=15%  Similarity=0.127  Sum_probs=207.2

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-.... --.+|++.+|+++++....+..... ....+.+..+|+.+.+..+ +-..+.++++++|++
T Consensus        39 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsE  115 (449)
T PRK07481         39 IDGKKLLDGVGGLWNVNV-GHNREEVKEAIVRQLDELEYYSTFD-GTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSD  115 (449)
T ss_pred             CCCCEEEECchhHHhhcC-CCCCHHHHHHHHHHHHhccceeccc-ccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHH
Confidence            358889999776422111 1247899999999987533211100 0112444555555544322 112468999999999


Q ss_pred             HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCC--CCCC-CChhH--
Q 014936          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPD--KGWE-VDLDD--  165 (415)
Q Consensus       112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~-~~~~~--  165 (415)
                      |++.+++....       +| .+|+....+|++....+...+.             .+..++.+..  ..+. .|.+.  
T Consensus       116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~  195 (449)
T PRK07481        116 SVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELA  195 (449)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHH
Confidence            99999987541       23 5799999999986654333211             1111211100  0011 13333  


Q ss_pred             ------HHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936          166 ------IESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (415)
Q Consensus       166 ------l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  234 (415)
                            +++.+.   +...+.++..| +...|.+ .+.+.++++.++|++||+++|.||++.++...|.... ...++..
T Consensus       196 ~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~  274 (449)
T PRK07481        196 RICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFG-SRGWGVK  274 (449)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhH-hhhcCCC
Confidence                  333332   23456677777 4455664 6788899999999999999999999998765554221 1223333


Q ss_pred             CCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHH
Q 014936          235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      ++++   +++|.+ ..| +++|.+++++        ++.+.+...        ...+++.++++.+++.+.|+...++  
T Consensus       275 PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~--  340 (449)
T PRK07481        275 PDIM---CLAKGI-TSGYVPLGATMVNA--------RIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVRE--  340 (449)
T ss_pred             CCEE---EEeecc-cCCCcCceEEEEcH--------HHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhh--
Confidence            3333   568994 456 5999999965        677666431        1235667899998888888653221  


Q ss_pred             HHHHHHHHHHHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCccc-cCCCCC-----HHHHHHHHHhhcCeEEEcCC
Q 014936          306 KKTLNLLKQSVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSL-LDDIID-----DIDFCFKLAKEESVIILPGT  375 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~-~~~~~~-----~~~~~~~ll~~~gi~v~~g~  375 (415)
                       +..++.++.-+++.+.|++    .|.+. . ...-|.++.+.+.... .....+     ...+... +.++||.+.+..
T Consensus       341 -~l~~~~~~~g~~l~~~L~~l~~~~~~i~-~-vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~g  416 (449)
T PRK07481        341 -DLPANAAKRGAYLLEGLQPLKERFELVG-D-VRGKGLMLALDLVADKATREPIDPSKGYANAVADV-ARENGVLVRPSG  416 (449)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHhhcCCCeE-E-EeecceEEEEEecccccccCCCCchhHHHHHHHHH-HHhCCeEEEecC
Confidence             2334444444555555543    33222 1 2345667766663211 000001     1234444 456799998742


Q ss_pred             CCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          376 AVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       376 ~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                           ..+|++..  .++++++++++.|.++++++
T Consensus       417 -----~~i~l~Ppl~it~~eid~~~~~l~~~l~~~  446 (449)
T PRK07481        417 -----TKIILSPPLVIQREDVDRIVDALDAGLSAV  446 (449)
T ss_pred             -----CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence                 35899874  59999999999999998764

>PRK07480 putative aminotransferase; Validated

Probab=99.80  E-value=1.4e-16  Score=152.26  Aligned_cols=354  Identities=14%  Similarity=0.140  Sum_probs=207.6

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++|+..|.-.... --.+|.+.+++++++....+.. .......+.+..+|+.+.+..+  ...+.++++++|++
T Consensus        47 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse  122 (456)
T PRK07480         47 SEGNKILDGMAGLWCVNV-GYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSE  122 (456)
T ss_pred             CCCCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence            358889999877422111 1247999999999987532211 0001123444555555544322  23469999999999


Q ss_pred             HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-e------------EEEeeccCC--CCCCCC------
Q 014936          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-E------------VRHFDLLPD--KGWEVD------  162 (415)
Q Consensus       112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-~------------~~~~~~~~~--~~~~~~------  162 (415)
                      |++.+++....       +| .+|+....+|++....+...+. .            +..++....  ..+..+      
T Consensus       123 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  202 (456)
T PRK07480        123 ANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGL  202 (456)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHH
Confidence            99999987531       23 4688888888875543322211 0            111111000  000011      


Q ss_pred             --hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          163 --LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       163 --~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                        ++.+++.+.   ....+.+|..| +...|.+ .|.+.++++.++|++||+++|.||++.++...|.... ...++..+
T Consensus       203 ~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~P  281 (456)
T PRK07480        203 AAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFG-SQHFGIKP  281 (456)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhh-hhhcCCCC
Confidence              245554442   23455667777 4455664 6778899999999999999999999988765554321 22233322


Q ss_pred             CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh----h-ccccCCchhHHHHHHHHhhCCCcHHHHHHHH
Q 014936          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQAAVPSILQQPDEVFFKKTL  309 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  309 (415)
                      .++   +++|.++ .| +++|.+++++        ++.+.+..    . ...+++.++++.+++.+.|+...++   ...
T Consensus       282 Div---~~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~---~l~  346 (456)
T PRK07480        282 DLM---TIAKGLT-SGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDE---GIV  346 (456)
T ss_pred             Cee---eeehhhc-cCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhC---CHH
Confidence            333   6789954 56 4899999865        67776631    1 2235678899999999988653221   233


Q ss_pred             HHH-HHHHHHHHHHhh---cCCCCcCCCCCCCceEEEEecCcccc--CCCCC---HHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936          310 NLL-KQSVDICYNKIK---EIPCISCPHKPEGSMAVMLKLNLSLL--DDIID---DIDFCFKLAKEESVIILPGTAVGLK  380 (415)
Q Consensus       310 ~~~-~~~~~~l~~~l~---~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~  380 (415)
                      ++. ++.-+++.+.|+   +.|.+. . ...-|+++-+.+.....  ....+   ....+...+.++||.+.+.     .
T Consensus       347 ~~~~~~~g~~l~~~l~~l~~~~~i~-~-vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----~  419 (456)
T PRK07480        347 ERVRDDTGPYLQKRLRELADHPLVG-E-VRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-----G  419 (456)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCee-e-EEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec-----C
Confidence            333 233444444443   343222 1 23456676666632110  00001   1123333445679999763     2


Q ss_pred             CeEEEEee--CChhhHHHHHHHHHHHHHHHHHHh
Q 014936          381 NWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       381 ~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      +.+|++..  .+++++++++++|.+++.+..+++
T Consensus       420 ~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~~~  453 (456)
T PRK07480        420 DRMIISPPLVITHAEIDELVEKARKALDATAAEL  453 (456)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            57999985  489999999999999998875543

>PRK06148 hypothetical protein; Provisional

Probab=99.79  E-value=1.5e-16  Score=165.47  Aligned_cols=345  Identities=12%  Similarity=0.035  Sum_probs=209.2

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +|+.++||..|...    ++ .+|++.+++++++..... ..|.     .+.+..+|+.+.+..+  -..+.++++++|+
T Consensus       622 dG~~ylD~~~g~~~----lGH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGs  690 (1013)
T PRK06148        622 RGRAYLDCFNNVCH----VGHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGS  690 (1013)
T ss_pred             CCCEEEEcccChhh----cCCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence            47789999877522    23 579999999998875322 2232     2334444554443222  1236899999999


Q ss_pred             HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccC--CCCCCC-C-------hhH
Q 014936          111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP--DKGWEV-D-------LDD  165 (415)
Q Consensus       111 ~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~--~~~~~~-~-------~~~  165 (415)
                      +|++.+++....  ...+|+....+|++....+.....             .+..++...  ...+.. +       .+.
T Consensus       691 EA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  770 (1013)
T PRK06148        691 EANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAES  770 (1013)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHH
Confidence            999999988641  235788889999876543322110             111111100  001110 1       123


Q ss_pred             HHhhcC-----CCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936          166 IESLAD-----QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (415)
Q Consensus       166 l~~~~~-----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  238 (415)
                      +++.++     ....+.+|+.| ....|. ..|.+.++++.++|+++|+++|.||++.++...|........++..+.++
T Consensus       771 l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv  850 (1013)
T PRK06148        771 VAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV  850 (1013)
T ss_pred             HHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee
Confidence            444332     13456677777 334454 56889999999999999999999999998765554222233333332333


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                         +++|.+ ..|+++|.+++++        ++.+.+...  ...+++.++++.+++.+.|+...++   +..++.++.-
T Consensus       851 ---t~gK~l-ggG~Plgav~~~~--------ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G  915 (1013)
T PRK06148        851 ---TMGKPI-GNGHPMGAVVTTR--------EIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDE---DLQRNALEIG  915 (1013)
T ss_pred             ---eecccc-cCCcceEEEEEcH--------HHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHH
Confidence               678995 5689999999965        677766432  2245678999999998888653222   2334445555


Q ss_pred             HHHHHHhhc----CCCCcCCCCCCCceEEEEecCccccCCCCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936          317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--  387 (415)
Q Consensus       317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--  387 (415)
                      +++.+.|++    .|.+. . ...-|+++-+.+.........+   ...+... +.++||.+.+....  .+.+||.+  
T Consensus       916 ~~l~~~L~~l~~~~~~i~-~-VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g~~--~~vlr~~Ppl  990 (1013)
T PRK06148        916 NYLLAGLRELQDRFDIIG-D-VRGMGLFLGIELVTDRKTKAPATAIARYVKNG-ARERGILIGTEGPH--DNVLKIRPPL  990 (1013)
T ss_pred             HHHHHHHHHHHHhCCCce-E-EeeeceEEEEEecCCccccCccHHHHHHHHHH-HHhCCeEEeccCCC--CCEEEEeCCc
Confidence            555555543    43222 1 3445777776664311100001   2234444 45679999764322  47788888  


Q ss_pred             eCChhhHHHHHHHHHHHHHHH
Q 014936          388 AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       388 ~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .++++++++++++|.+++++.
T Consensus       991 ~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148        991 IFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred             cCCHHHHHHHHHHHHHHHHHH
Confidence            478999999999999998764

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.79  E-value=1.7e-16  Score=152.05  Aligned_cols=348  Identities=13%  Similarity=0.059  Sum_probs=212.1

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+++.++||..|.-.... --.+|.+.+++++++....+. ... ....+.+..+++.+.+..+  ...+.++++++|++
T Consensus        44 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~-~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE  118 (466)
T PRK07030         44 FEGKRYLDAVSSWWVNVF-GHANPRINQRIKDQVDQLEHV-ILA-GFSHEPVIELSERLVKITP--PGLSRCFYADNGSS  118 (466)
T ss_pred             CCCCEEEEcchhHHhhcC-CCCCHHHHHHHHHHHHhcCCc-ccc-ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence            358889999877522111 124789999999998753221 110 1112444555555543221  23469999999999


Q ss_pred             HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCC--CCCC-------
Q 014936          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDK--GWEV-------  161 (415)
Q Consensus       112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~-------  161 (415)
                      |++.+++....       +| .+|+....+|++....+...+..             +..+|.....  .++.       
T Consensus       119 Ave~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~  198 (466)
T PRK07030        119 AIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSR  198 (466)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHH
Confidence            99999988631       22 57899999999876554332211             1112111000  0001       


Q ss_pred             -ChhHHHhhcCC--CceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          162 -DLDDIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       162 -~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                       +++.+++.+..  ...+.+|..|  +...|. ..+.+.++++.++|+++|+++|.||++.++...|.... ...++..+
T Consensus       199 ~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a-~~~~gv~P  277 (466)
T PRK07030        199 RMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFA-CEQAGIRP  277 (466)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchH-HHhcCCCC
Confidence             24556666642  3456677777  455566 46788899999999999999999999998766554221 12233333


Q ss_pred             CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh--------hccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      .++   +++|.+ ..| +++|.+++++        ++.+.+..        ....+++.++++.+++.+.|+...++   
T Consensus       278 Div---~~gKgl-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~---  342 (466)
T PRK07030        278 DFL---CLSKAL-TGGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQD---  342 (466)
T ss_pred             CEE---eeehhc-cCCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhc---
Confidence            344   468995 467 5999999865        67766642        12235667899999998888653221   


Q ss_pred             HHHHHHHHHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCccccC--CC-CC---HHHHHHHHHhhcCeEEEcCCCC
Q 014936          307 KTLNLLKQSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLLD--DI-ID---DIDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~~--~~-~~---~~~~~~~ll~~~gi~v~~g~~~  377 (415)
                      +..++.++.-+++.+.|++   .|.+. . ...-|+++-+.+......  .. .+   ...+...+ .++|+.+.+..  
T Consensus       343 ~l~~~~~~~G~~l~~~L~~l~~~~~v~-~-vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~g--  417 (466)
T PRK07030        343 NVIENNRALARRMAEATAHLADHPHVA-E-VRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHA-LERGALLRPLG--  417 (466)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcCCCEE-E-eEeceeEEEEEeccCccccccCcchhHHHHHHHHHH-HHCCeEEEecC--
Confidence            2344555555555555544   33332 1 344577777766321110  00 01   12344444 56799997632  


Q ss_pred             CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                         +.+|+..  ..+++++++++++|.+++++.
T Consensus       418 ---~~i~~~Ppl~it~~eid~~~~~l~~al~~~  447 (466)
T PRK07030        418 ---SVVYFLPPYVITPEQIDFLAEVASEGIDIA  447 (466)
T ss_pred             ---CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence               5789876  579999999999999999876

>PRK06917 hypothetical protein; Provisional

Probab=99.79  E-value=3.3e-16  Score=149.52  Aligned_cols=354  Identities=16%  Similarity=0.125  Sum_probs=213.1

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++|+..|.-...  ++ .+|.+.+++++++....+ .+... ...+.+..+|+.+.+..+  ...+.++++++|+
T Consensus        28 ~dG~~ylD~~~g~~~~~--lGh~hp~v~~Ai~~ql~~~~~-~~~~~-~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs  101 (447)
T PRK06917         28 QNGNKYFDGSSGAVTAG--IGHGVKEIADAIKEQAEEVSF-VYRSQ-FTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGS  101 (447)
T ss_pred             CCCCEEEECchhHHhcc--CCCCCHHHHHHHHHHHhhCcC-ccccc-cCCHHHHHHHHHHHHhCC--CCCCEEEEeCChH
Confidence            35889999987742211  22 479999999999886422 11110 112444455555544222  1235899999999


Q ss_pred             HHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCC--C-------
Q 014936          111 QAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGW--E-------  160 (415)
Q Consensus       111 ~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~--~-------  160 (415)
                      +|++.+++...       .+| .+|+....+|++....+.....             .+..++.......  .       
T Consensus       102 EAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  181 (447)
T PRK06917        102 EANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQ  181 (447)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHH
Confidence            99999999862       123 5799999999987655433211             1111111100000  0       


Q ss_pred             -CChhHHHhhcCC---CceEEEecCC-CC-cccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          161 -VDLDDIESLADQ---NTVALVIINP-GN-PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       161 -~~~~~l~~~~~~---~~~~v~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                       -+++.+++.++.   +..+.++..| .. ..|. ..|.+.++++.++|+++|+++|.||++.++...|.... ...++.
T Consensus       182 ~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a-~~~~gv  260 (447)
T PRK06917        182 LACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFA-MEHWGV  260 (447)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhh-HHhcCC
Confidence             023556666642   3456677777 33 3445 46789999999999999999999999988655554221 122332


Q ss_pred             CCCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936          234 TVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPDEVFFKK  307 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  307 (415)
                      .++++   +++|.+ ..|+ ++|.+++++        ++.+.+...     ...++..++++.+++.+.|+...+   ++
T Consensus       261 ~PDi~---~~gK~l-~~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~~  325 (447)
T PRK06917        261 EPDIM---TLGKGL-GAGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK---HN  325 (447)
T ss_pred             CCCEE---Eeeehh-ccCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH---CC
Confidence            22333   679995 4564 899999865        677766432     113556789999888888865321   13


Q ss_pred             HHHHHHHHHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCcc-ccC-CCC----CHHHHHHHHHhhcCeEEEcCCCC
Q 014936          308 TLNLLKQSVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLS-LLD-DII----DDIDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       308 ~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~-~~~-~~~----~~~~~~~~ll~~~gi~v~~g~~~  377 (415)
                      ..++++++-++|.+.|++    .|.+.  ....-|.++.+.+... ... ...    ....+... +.++||.+.|...-
T Consensus       326 l~~~~~~~g~~l~~~L~~l~~~~~~i~--~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~~~  402 (447)
T PRK06917        326 LPEKAAEKGEYLIKGLQKVQQQSTIIG--DVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISV-AAKNGLLLYPAVAG  402 (447)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCEE--EEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHH-HHhCCcEEEecccc
Confidence            445555555555555544    33222  1334566666666321 000 000    12334444 45679999875211


Q ss_pred             --C-CCCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936          378 --G-LKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       378 --~-~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                        + ..+.+|++..  .+++++++++++|.++++++.+
T Consensus       403 ~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~  440 (447)
T PRK06917        403 QDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ  440 (447)
T ss_pred             cCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence              1 1368999885  8999999999999999988644

>PRK07036 hypothetical protein; Provisional

Probab=99.79  E-value=2.1e-16  Score=151.48  Aligned_cols=352  Identities=14%  Similarity=0.153  Sum_probs=211.7

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++|+..|.-.... --.+|++.+++++++....+ ..+..  ...+.+..+|+.+.+..+  ..-+.++++++|+
T Consensus        48 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs  122 (466)
T PRK07036         48 ADGRRYLDGIGGMWCVNV-GYGREEMADAIADQARRLPYYTPFGD--MTNAPAAELAAKLAELAP--GDLNHVFLTTGGS  122 (466)
T ss_pred             CCCCEEEECcccHHhhcC-CCCCHHHHHHHHHHHHhCcccccccc--cCCHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence            358889999877422211 12479999999998875321 11210  113445556666554322  2246899999999


Q ss_pred             HHHHHHHHHhc------C-CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCC--CCCCCC-----
Q 014936          111 QAIDVAMALLS------R-PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPD--KGWEVD-----  162 (415)
Q Consensus       111 ~al~~~~~~l~------~-~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~~~-----  162 (415)
                      +|++.+++...      + +| .+|+....+|++....+.....             .+..++....  ..++.+     
T Consensus       123 eAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  202 (466)
T PRK07036        123 TAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFC  202 (466)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHH
Confidence            99999998752      1 22 5789889999986655433211             1122221100  001111     


Q ss_pred             ---hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc-ccCC
Q 014936          163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFGS  233 (415)
Q Consensus       163 ---~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~  233 (415)
                         ++.+++.+.   ....+.+|..| +...|.. .+.+.++++.++|++||+++|.||++.++...|.... .. .++.
T Consensus       203 ~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~-~~~~~gv  281 (466)
T PRK07036        203 DFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFA-SEAVFGI  281 (466)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhh-hhhhcCC
Confidence               233444442   24456677777 4555664 6788899999999999999999999988765553221 12 2232


Q ss_pred             CCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936          234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVF  304 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~  304 (415)
                      .+.++   +++|.+ ..| +++|.+++++        ++.+.+...        ...+++.++++.+++.+.|+...+  
T Consensus       282 ~PDiv---t~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~--  347 (466)
T PRK07036        282 QPDII---TFAKGL-TSGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER--  347 (466)
T ss_pred             CCCEE---EEcccc-ccCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh--
Confidence            22333   578995 457 5899999865        677766421        112566789999998888865321  


Q ss_pred             HHHHHHHHHHHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCcccc-CCC-CC----HHHHHHHHHhhcCeEEEcCC
Q 014936          305 FKKTLNLLKQSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLL-DDI-ID----DIDFCFKLAKEESVIILPGT  375 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~-~~~-~~----~~~~~~~ll~~~gi~v~~g~  375 (415)
                       ++..++.++.-+++.+.|+.   .|.+.  ....-|.++.+.+..... ... ..    ...+... +.++||.+.+..
T Consensus       348 -~~l~~~~~~~g~~l~~~L~~l~~~~~v~--~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~  423 (466)
T PRK07036        348 -EGLCEHVREVGPYFEERLASLRELPLVG--DVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRH-CQERGLLVRPLE  423 (466)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHhccCCCEE--EEEeeceEEEEEEccCccccCCCCchhHHHHHHHHH-HHHCCcEEeecC
Confidence             23445555555555555544   33222  133456777777742110 000 01    2234444 456799997642


Q ss_pred             CCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHHHh
Q 014936          376 AVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       376 ~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                           +.+|++..  .+++++++++++|.++++++.+.+
T Consensus       424 -----~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~~~  457 (466)
T PRK07036        424 -----HLCVLSPPLIITRAQIDEIVAILRAAIEETADEL  457 (466)
T ss_pred             -----CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence                 56888874  599999999999999998875543

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.79  E-value=7.7e-18  Score=140.44  Aligned_cols=166  Identities=16%  Similarity=0.093  Sum_probs=129.2

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH-HHHHhCCCeEEEeeccCCC
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-LSAAFRHIEVRHFDLLPDK  157 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~-~~~~~~g~~~~~~~~~~~~  157 (415)
                      +.++++.++++++      .+.+++++++|+++++.+++.++.+++++|+++.++|++.. ..+...|.++..++.+...
T Consensus         2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~   75 (170)
T cd01494           2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAG   75 (170)
T ss_pred             HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCC
Confidence            3678999999983      46789999999999999999999988999999999999988 7888899999998875443


Q ss_pred             CCCCChhHHHhhc-CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC
Q 014936          158 GWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (415)
Q Consensus       158 ~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  236 (415)
                      ....+.+.+++.. .++++.+++++|+|++|...+.   ++|.++|+++|+++|+|++|..+...... ....   ....
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~---~~~~  148 (170)
T cd01494          76 YGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG-VLIP---EGGA  148 (170)
T ss_pred             ccchhhhhhhhccccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc-cccc---cccC
Confidence            3323333554433 4578889999999999999764   78888888999999999999987755322 0111   1123


Q ss_pred             eEEEccCccccCCCCceEEEEEe
Q 014936          237 ILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       237 ~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      .+++.|++|.++.  .++|++++
T Consensus       149 d~~~~s~~K~~~~--~~~G~l~~  169 (170)
T cd01494         149 DVVTFSLHKNLGG--EGGGVVIV  169 (170)
T ss_pred             CEEEEEcccccCC--CceEEEEe
Confidence            4778899999765  66999876

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.79  E-value=1e-16  Score=152.40  Aligned_cols=340  Identities=15%  Similarity=0.105  Sum_probs=208.2

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +++.++||..|......+ -.+|++.+++.+++........  .......++-+.+++..    +  ..-+.++++++|+
T Consensus        43 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~----~--~~~~~v~f~~sGs  115 (427)
T TIGR00508        43 DGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMT----P--NALDCVFLADSGS  115 (427)
T ss_pred             CCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhC----C--CCCCEEEEeCCcH
Confidence            478899998875322222 3578999999998875321111  11112234444444433    2  2236999999999


Q ss_pred             HHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhC-CCe-------------EEEeeccCCCCCC-----CCh
Q 014936          111 QAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HIE-------------VRHFDLLPDKGWE-----VDL  163 (415)
Q Consensus       111 ~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~-----~~~  163 (415)
                      ++++.+++....       +| .+|+....+|++....+... +..             +..++. +...+.     -|+
T Consensus       116 eA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~  194 (427)
T TIGR00508       116 VAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAI  194 (427)
T ss_pred             HHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHH
Confidence            999999987541       23 57999999999865444322 211             011111 101110     145


Q ss_pred             hHHHhhcCC--CceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936          164 DDIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (415)
Q Consensus       164 ~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  238 (415)
                      +++++.+..  ...+.+++.|  ++..|. ..+.+.+++|.++|+++|+++|+||++.++...|..... ..++....++
T Consensus       195 ~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v~pDi~  273 (427)
T TIGR00508       195 TPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFAC-EHAGVVPDIL  273 (427)
T ss_pred             HHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchh-hhcCCCCCEE
Confidence            666666642  3456677777  455555 457899999999999999999999999776555543221 1222222233


Q ss_pred             EEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNL  311 (415)
Q Consensus       239 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  311 (415)
                         +++|.+ ..| +.++.++.++        ++.+.++..      ...++..++++..++.+.|+...+   ++..++
T Consensus       274 ---~~gK~l-~gG~~p~~a~~~~~--------~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~---~~~~~~  338 (427)
T TIGR00508       274 ---CVGKAL-TGGYMTLSATVTTD--------KVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE---GEWQKQ  338 (427)
T ss_pred             ---Eechhh-hcCcccceEEEEcH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh---CCHHHH
Confidence               379997 567 4788888754        577776542      112345688888888888764221   134567


Q ss_pred             HHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--
Q 014936          312 LKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--  388 (415)
Q Consensus       312 ~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--  388 (415)
                      ++++.+++.+.|+++.....+ ....-|.++.+.+...     .....+...+ .++||.+.+..     ..+|++..  
T Consensus       339 ~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gv~~~~~~-----~~l~~~ppl~  407 (427)
T TIGR00508       339 VSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKP-----VNVEELQKKF-VEQGVWIRPFG-----KLIYVMPPYI  407 (427)
T ss_pred             HHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCc-----cCHHHHHHHH-HHCCeEEEecC-----CEEEEECCCC
Confidence            777777777777765211101 0122366666666421     1244555555 56799997642     47899885  


Q ss_pred             CChhhHHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++++++++++++|++++++
T Consensus       408 ~t~~~id~~~~~l~~~l~~  426 (427)
T TIGR00508       408 ITTEQLQKLTAALIEALHE  426 (427)
T ss_pred             CCHHHHHHHHHHHHHHHhc
Confidence            7899999999999998854

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.79  E-value=1.8e-16  Score=151.88  Aligned_cols=346  Identities=16%  Similarity=0.135  Sum_probs=208.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++|+..|.-.... --.+|.+.+++++++....+. ...   ...+.+..+|+.+.+..+  ...+.++++++|++
T Consensus        54 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~~~~~---~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse  127 (460)
T PRK06916         54 NGNEYYDGVSSIWLNVH-GHQVPELDEAIREQLNKIAHSTLLG---LANVPSILLAEKLIEVVP--EGLKKVFYSDSGAT  127 (460)
T ss_pred             CCCEEEEcchhHHHhhc-CCCCHHHHHHHHHHHHhCCCccccc---cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence            47788898766421111 124789999999998752211 110   012333444444443222  22368999999999


Q ss_pred             HHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCC--CCC--------
Q 014936          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE--------  160 (415)
Q Consensus       112 al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~--------  160 (415)
                      |++.+++....       +| .+|+....+|++....+...+.             .+..+|.....  .+.        
T Consensus       128 Ave~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~  207 (460)
T PRK06916        128 AVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVK  207 (460)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence            99999987642       33 5799999999986654433221             11122211000  001        


Q ss_pred             CChhHHHhhcCC--CceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          161 VDLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       161 ~~~~~l~~~~~~--~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                      -+++.+++.++.  ...+.+|..|  +...|.+ .|.+.++++.++|+++|+++|.||++.++...|.... ...++..+
T Consensus       208 ~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a-~~~~gv~P  286 (460)
T PRK06916        208 KHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFA-CEHENVTP  286 (460)
T ss_pred             HHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhH-HHhcCCCC
Confidence            124556666642  3456677777  5566765 6889999999999999999999999988755554221 22233222


Q ss_pred             CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh-------h-ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------Y-FDILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      .++   +++|.+ ..| +++|.+++++        ++.+.+..       . ...+.+.++++..++.+.|+...+   +
T Consensus       287 Div---~~gK~l-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~---~  351 (460)
T PRK06916        287 DIM---TAGKGL-TGGYLPIAITVTTD--------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK---T  351 (460)
T ss_pred             Cee---eeehhh-hcCccccceeeecH--------HHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh---c
Confidence            333   578995 467 5999999865        56665532       1 123456788998888888864322   2


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCcccc-CCC-C-C---HHHHHHHHHhhcCeEEEcCCCC
Q 014936          307 KTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLL-DDI-I-D---DIDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~-~~~-~-~---~~~~~~~ll~~~gi~v~~g~~~  377 (415)
                      ...++++++-+++.+.|+++   +.+.  ....-|.++-+.+..... .+. . +   ...+... +.++||.+.|..  
T Consensus       352 ~l~~~~~~~g~~l~~~l~~l~~~~~v~--~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g--  426 (460)
T PRK06916        352 NLIEQVARKTEYVATQLEDLFALKHVG--DIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKR-SRELGMLTRPLG--  426 (460)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCCCeE--EeecCCceeeEEeecccccccCCCchhhHHHHHHHH-HHHCCeEEEecC--
Confidence            34455666666666666654   3222  123446666665632110 000 0 0   1234444 456799998742  


Q ss_pred             CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                         +.+|+..  ..+++++++++++|.++++++
T Consensus       427 ---~~l~~~Ppl~it~~~id~~~~~l~~~l~~~  456 (460)
T PRK06916        427 ---NTIVFMPPLASTIDELDEMLRILYKAISDV  456 (460)
T ss_pred             ---CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence               5788886  578999999999999998753

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.79  E-value=1.1e-16  Score=151.37  Aligned_cols=279  Identities=16%  Similarity=0.125  Sum_probs=201.1

Q ss_pred             CCCcHHHHHHHHHHHhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----
Q 014936           51 FHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP-----  123 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~-----  123 (415)
                      ..+++...+++...+..+.  +..|+   +..++++.+.+++.+.++.+ ..-.-.+|+|+|+++.+++.+..+.     
T Consensus        72 ~~~~~~a~~~~~~~~~~nl~d~~~~p---~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~  147 (460)
T COG0076          72 TRVPPVAAELLVSALNKNLGDPDESP---AAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRA  147 (460)
T ss_pred             CCCHHHHHHHHHHHHhhcCCCcccCh---hHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHh
Confidence            3456777788877777542  22333   56899999999999988855 3445689999999999888775321     


Q ss_pred             ---C------CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE--EEecCCCCccccCCCH
Q 014936          124 ---G------ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA--LVIINPGNPCGNVYSY  192 (415)
Q Consensus       124 ---g------d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--v~i~~p~nptG~~~~~  192 (415)
                         +      .+|+++.-.|.++...+...|++...++.++. ++.+|++++++++++.+..  |+-+-++.++|.+   
T Consensus       148 ~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---  223 (460)
T COG0076         148 LAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---  223 (460)
T ss_pred             hhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---
Confidence               1      16999999999999999999999999998875 6789999999999988776  8888889999999   


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccC-CCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      +++++|+++|+++++++++|.+++++... ...... ...+..  -.-+..+++|. +..-+.+||++.++++      .
T Consensus       224 Ddi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~--vdSIt~d~HK~-g~aP~~~G~il~rd~e------~  294 (460)
T COG0076         224 DDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEG--VDSITVDGHKY-GLAPIGCGVVLFRDEE------A  294 (460)
T ss_pred             CCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCC--ceEEEECcccc-cCCCCCceEEEEECHH------H
Confidence            99999999999999999999999988743 111111 111111  12334489998 7877889999998853      2


Q ss_pred             HHHHHHhhc---------ccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          271 VVERMKKYF---------DIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       271 ~~~~~~~~~---------~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                      +.+.+....         +.+  ++.+.....++...+.....+.+.++.++..+.++++.+.|++.+.++.+..| ..+
T Consensus       295 l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p-~l~  373 (460)
T COG0076         295 LRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEP-ELP  373 (460)
T ss_pred             hhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCC-ccc
Confidence            333332110         001  11112122333333444445788999999999999999999999778855445 555


Q ss_pred             EEEEecCc
Q 014936          340 AVMLKLNL  347 (415)
Q Consensus       340 ~~~~~l~~  347 (415)
                      .+.+++++
T Consensus       374 ~V~fr~~~  381 (460)
T COG0076         374 IVAFRLKD  381 (460)
T ss_pred             eEEEEcCC
Confidence            66667743

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.78  E-value=7.4e-16  Score=147.53  Aligned_cols=353  Identities=15%  Similarity=0.090  Sum_probs=208.6

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEe-CCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVT-SGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~-~g~  109 (415)
                      .+|+.++|+..|.-.... --.+|.+.+++++++.........  ....+.+..+|+.+....+.... .+.++++ ++|
T Consensus        60 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SG  136 (464)
T PRK06938         60 VEGRQFIDCLAGAGTLAL-GHNHPVVIEAIQQVLADELPLHTL--DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTG  136 (464)
T ss_pred             CCCCEEEEccCCcccccc-CCCCHHHHHHHHHHHHhhhccccc--ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCc
Confidence            347889999777532211 124789999999988642211110  01123444455555432221111 1356565 799


Q ss_pred             HHHHHHHHHHhcC-CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCC--CCC--------CChh
Q 014936          110 TQAIDVAMALLSR-PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE--------VDLD  164 (415)
Q Consensus       110 ~~al~~~~~~l~~-~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~--------~~~~  164 (415)
                      ++|++.+++.... .| .+|+....+|++....+.....             ++..++.....  .++        .+++
T Consensus       137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  216 (464)
T PRK06938        137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH  216 (464)
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence            9999999987641 23 5788889999987655433211             12222221100  000        1256


Q ss_pred             HHHhhcCC-----CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCe
Q 014936          165 DIESLADQ-----NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI  237 (415)
Q Consensus       165 ~l~~~~~~-----~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  237 (415)
                      .+++.++.     ...+.+|..| +...|.+ .|.+.++++.++|+++|+++|.||++.++...|... ....++..+.+
T Consensus       217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PDi  295 (464)
T PRK06938        217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPDV  295 (464)
T ss_pred             HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCCE
Confidence            67777653     1356677777 4445665 568999999999999999999999999876555422 12223333334


Q ss_pred             EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                      +   +++|.+ ..|+++|.+++++        ++ +.+... ...++..++++.+++.+.|+...++   +..++.++.-
T Consensus       296 v---~~gKgl-ggG~PlsAv~~~~--------~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G  359 (464)
T PRK06938        296 V---VLSKAI-GGSLPLAVVVYRE--------WL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEH---RLAEHAAAMG  359 (464)
T ss_pred             E---Eeeccc-cCCCceEEEeehh--------Hh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHh---HHHHHHHHHH
Confidence            4   468995 4689999999865        32 333222 2245678899999998888653322   2334444444


Q ss_pred             HHHHHHhhc----CCCCcCCCCCCCceEEEEecCcc-ccCC----CC-C---HHHHHHHHHhhcCeEEEcCCCCCCCCeE
Q 014936          317 DICYNKIKE----IPCISCPHKPEGSMAVMLKLNLS-LLDD----II-D---DIDFCFKLAKEESVIILPGTAVGLKNWL  383 (415)
Q Consensus       317 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~-~~~~----~~-~---~~~~~~~ll~~~gi~v~~g~~~~~~~~i  383 (415)
                      +++.+.|++    .|.+.  ....-|+++-+.+... ...+    .. +   ...+...+ .++|+.+.++..+  .+.+
T Consensus       360 ~~l~~~L~~l~~~~~~i~--~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~g~~--~~~l  434 (464)
T PRK06938        360 ERLREHLRQLQRDYPQLG--DVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQREC-LRRGLILELGGRH--GSVV  434 (464)
T ss_pred             HHHHHHHHHHHHhCCCee--eeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHH-HHCCeEEeecCCC--CCEE
Confidence            445444443    44332  1345577777776321 1000    00 0   12344444 5679999875322  3679


Q ss_pred             EEEe--eCChhhHHHHHHHHHHHHHHHH
Q 014936          384 RVTF--AVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       384 Ri~~--~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      |+..  ..++++++++++++.+++.+..
T Consensus       435 ~~~Ppl~it~~eid~~~~~l~~~l~~~~  462 (464)
T PRK06938        435 RFLPPLIITAEQIDEVAEIFAEAVAAAV  462 (464)
T ss_pred             EEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence            9976  5799999999999999997643

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.78  E-value=6.7e-18  Score=150.93  Aligned_cols=334  Identities=12%  Similarity=0.117  Sum_probs=223.2

Q ss_pred             ceeEecccCCC-C-CCCCCCcHHHHHHHHHHHhc-C-CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           36 KVISLAMGDPT-V-HSCFHTTHVATEAVAEALLS-E-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        36 ~~i~l~~g~~~-~-~~~~~~~~~~~~a~~~~~~~-~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .++|+++-+-- . ....+..+.+.+++...-.. + ....-+...-+.++++.+|+|++       .++.+++..| -.
T Consensus       137 ~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~  208 (519)
T KOG1357|consen  137 RCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FA  208 (519)
T ss_pred             eeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-cc
Confidence            46777665511 0 01245567788877775332 1 11222344456788888888873       5677777776 56


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-------C-----ceEEEe
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------N-----TVALVI  179 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~-----~~~v~i  179 (415)
                      .+.+.+.++++||.-|+.++..|.++...++..|+.++.+.++       |++.||+.+++       +     .+.+++
T Consensus       209 TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~ii  281 (519)
T KOG1357|consen  209 TNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKILIC  281 (519)
T ss_pred             ccccCcceeecCCcceeeccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchheeee
Confidence            6667788899999999999999999999999999999998873       45555555432       1     234444


Q ss_pred             cCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC--CCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          180 INP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       180 ~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      ..- ...-|.+   ..+.+++++++++..+++.||+|+..+.+.  .+...+...++.+..|.+++|.|+|++.|   |+
T Consensus       282 vegiysmEg~i---v~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gy  355 (519)
T KOG1357|consen  282 VEGIYSMEGTI---VDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GY  355 (519)
T ss_pred             eccceeccCee---cccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ce
Confidence            433 3466776   679999999999999999999999988653  33333444455556799999999999998   99


Q ss_pred             EEeeCCCCCCChHHHHHHHHhhcc----ccCCchhHHHHHHHHhhCC----CcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936          257 FVTTDPCGMFRKPKVVERMKKYFD----ILGDPATFIQAAVPSILQQ----PDEVFFKKTLNLLKQSVDICYNKIKEIPC  328 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  328 (415)
                      +.+++        ++++.++....    .+..++++.|..+.. ++.    ...+..++..++++++..+++..+... +
T Consensus       356 iagsk--------~lid~lrt~s~~~~yat~~sppvaqq~~ss-l~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-g  425 (519)
T KOG1357|consen  356 IAGSK--------ELIDYLRTPSPSALYATSLSPPVAQQILTS-VKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-G  425 (519)
T ss_pred             ecCcH--------HHHhhhccCCCceeecccCChHHHHHHHHH-HHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-c
Confidence            99876        67887766532    123345555544433 222    123667888899999999999999988 6


Q ss_pred             CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-C--CCeEEEEee--CChhhHHHHHHHHHH
Q 014936          329 ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-L--KNWLRVTFA--VDPYSLEECLDRIKS  403 (415)
Q Consensus       329 ~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~--~~~iRi~~~--~~~~~l~~~l~~l~~  403 (415)
                      +.++ ....+..+.+-+-.+     ..-..+-++++++ +|.++-..++. .  ...+|++.+  ++.|+++.+++.+.+
T Consensus       426 fivy-G~~dSpVvplll~~~-----~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~  498 (519)
T KOG1357|consen  426 FIVY-GNNDSPVVPLLLYGP-----AKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDR  498 (519)
T ss_pred             EEEe-cCCCCCcceeeecCc-----ccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhh
Confidence            6633 444443322222111     1234555666655 66655443322 2  567888884  688999999999887


Q ss_pred             HHHH
Q 014936          404 FYQR  407 (415)
Q Consensus       404 ~~~~  407 (415)
                      .-+.
T Consensus       499 ~g~~  502 (519)
T KOG1357|consen  499 VGDE  502 (519)
T ss_pred             hchh
Confidence            7544

>PRK07483 hypothetical protein; Provisional

Probab=99.78  E-value=6.8e-16  Score=147.23  Aligned_cols=351  Identities=14%  Similarity=0.140  Sum_probs=209.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +++.++||..|.-.... --.+|.+.++++++++...+.....  ...+....+|+.+.+..+  -..+.++++++|++|
T Consensus        28 dG~~ylD~~~g~~~~~l-Gh~~p~v~~av~~ql~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEA  102 (443)
T PRK07483         28 TGKRYLDASGGAAVSCL-GHSHPRVIAAIHAQIDRLAYAHTSF--FTTEPAEALADRLVAAAP--AGLEHVYFVSGGSEA  102 (443)
T ss_pred             CCCEEEEcCccHhhhcc-CCCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHH
Confidence            48899999887422111 1247899999999988532111110  112344455555543221  123699999999999


Q ss_pred             HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCC----------
Q 014936          113 IDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV----------  161 (415)
Q Consensus       113 l~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~----------  161 (415)
                      ++.+++....       +| .+|+....+|++....+.....             .+..++..  ..+..          
T Consensus       103 ve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~  180 (443)
T PRK07483        103 VEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPC--YAYREQRAGESDEAY  180 (443)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCC--ccccccccCCCHHHH
Confidence            9999987541       33 4689989999887554433211             11112111  00110          


Q ss_pred             ---ChhHHHhhcC---CCceEEEecCCCC--cccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          162 ---DLDDIESLAD---QNTVALVIINPGN--PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       162 ---~~~~l~~~~~---~~~~~v~i~~p~n--ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                         .++.+++.+.   ....+.++..|-.  ..|. ..+.+.++++.++|++||+++|.||++.++...|... ....++
T Consensus       181 ~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~g  259 (443)
T PRK07483        181 GQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF-ACEEDG  259 (443)
T ss_pred             HHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH-HHhhcC
Confidence               0245665443   2345567777732  2354 5678899999999999999999999999876555422 122233


Q ss_pred             CCCCeEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      ..++++   +++|.+ ..|+ ++|.+++++        ++.+.+...     ...++..++++.+++.+.|+...++   
T Consensus       260 v~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~---  324 (443)
T PRK07483        260 VAPDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAED---  324 (443)
T ss_pred             CCCCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc---
Confidence            333333   568994 5675 999999976        676666432     1235678899998888888653221   


Q ss_pred             HHHHHHHHHHHHHHHHhh----cCCCCcCCCCCCCceEEEEecCcccc--CCCC---C-HHHHHHHHHhhcCeEEEcCCC
Q 014936          307 KTLNLLKQSVDICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLL--DDII---D-DIDFCFKLAKEESVIILPGTA  376 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~---~-~~~~~~~ll~~~gi~v~~g~~  376 (415)
                      +..++.++.-+++.+.|+    +.|.+.  ....-|+++-+.+.....  ....   . ...+...+ .++|+.+.+...
T Consensus       325 ~l~~~~~~~g~~l~~~L~~l~~~~~~i~--~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~~~  401 (443)
T PRK07483        325 GLLANVRARGEQLRARLRERLGQHPHVG--DIRGRGLFVGVELVADRATKAPFDPALKLHARIKREA-MARGLMVYPMGG  401 (443)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCee--eEeecccEEEEEEeecccccCCCCchhhHHHHHHHHH-HHCCcEEEecCc
Confidence            233444444444444443    444332  134556666666632110  0000   0 12344444 567999986432


Q ss_pred             C--C-CCCeEEEEe--eCChhhHHHHHHHHHHHHHHHH
Q 014936          377 V--G-LKNWLRVTF--AVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       377 ~--~-~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      .  + ..+.+|+..  ..+++++++++++|.+++.+..
T Consensus       402 ~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~  439 (443)
T PRK07483        402 TIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL  439 (443)
T ss_pred             cccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            1  1 136899988  4789999999999999998754

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.77  E-value=7.6e-16  Score=136.56  Aligned_cols=338  Identities=15%  Similarity=0.115  Sum_probs=221.6

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG------YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      +..|+|-...      .-.++.+.++.-+.+.+....+      |+-.+-..+++....+..++.+|.  +-.++--.| 
T Consensus        26 ~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga--~~anVQPhS-   96 (413)
T COG0112          26 REHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA--EYANVQPHS-   96 (413)
T ss_pred             hhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC--CccccCCCC-
Confidence            4567775554      3457899999888776532222      333334455666555666555552  333454444 


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---HhCC--CeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCC
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSA---AFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINP  182 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~---~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p  182 (415)
                      |++|+..++.++.+|||+|+-.+..+.++....   ...|  .+.+.++++++ +..+|.|++++...+ ++|+++....
T Consensus        97 Gs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~S  175 (413)
T COG0112          97 GSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGGS  175 (413)
T ss_pred             chHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHhCCCEEEECcc
Confidence            577888899999999999998888877654322   1122  46666777664 346999999987654 6776665432


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      ..|     -.-+.+++.++|++-|.++++|-+|-.+. -+|..+.|+..  .   -|+.+|.+|+  +.|.|-|.+.+++
T Consensus       176 aY~-----r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~--A---dvVTtTTHKT--lrGPrGG~Il~~~  243 (413)
T COG0112         176 AYS-----RPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH--A---DVVTTTTHKT--LRGPRGGIILTND  243 (413)
T ss_pred             ccc-----cccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc--c---ceEeCCcccC--CCCCCceEEEecc
Confidence            222     22357888888889999999999995444 44444444433  1   1888999999  6788889998865


Q ss_pred             CCCCCChHHHHHHHHhhccccCCchh--HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          262 PCGMFRKPKVVERMKKYFDILGDPAT--FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                             .++.++++.........+|  ...++.+.++.+..+..+++..+++.++++.|.+.|.+. |+.++..-....
T Consensus       244 -------eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnH  315 (413)
T COG0112         244 -------EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNH  315 (413)
T ss_pred             -------HHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccce
Confidence                   2688888876443333333  333333334443333557888899999999999999987 888553344456


Q ss_pred             EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC------CCCeEEEEe------eCChhhHHHHHHHHHHHHHH
Q 014936          340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG------LKNWLRVTF------AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------~~~~iRi~~------~~~~~~l~~~l~~l~~~~~~  407 (415)
                      .+.+++...   +.  ....+..+|.+.||.+.--..+.      .++.|||..      +..++++++..+.|.+++..
T Consensus       316 l~lVDl~~~---~~--~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~  390 (413)
T COG0112         316 LVLVDLRSK---GL--TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG  390 (413)
T ss_pred             EEEEEcccC---CC--CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence            677777621   11  34456777889999996443322      267899988      23567888888888887764

>PRK04311 selenocysteine synthase; Provisional

Probab=99.77  E-value=1.3e-15  Score=144.57  Aligned_cols=321  Identities=16%  Similarity=0.092  Sum_probs=192.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC-----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA  125 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd  125 (415)
                      .+.++.+.+++.+.+.......|.-     ..-+..+++.+++++        ..+..++++++++|+..++.++ .+||
T Consensus        96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a~vv~sgtaAl~l~l~~l-~~Gd  166 (464)
T PRK04311         96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDALVVNNNAAAVLLALNAL-AAGK  166 (464)
T ss_pred             CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHh-CCCC
Confidence            3467889999988876432112211     112357888888887        3446788888999999888765 7899


Q ss_pred             EEEEcCCCCcc------hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc--cccCCCHHHHHH
Q 014936          126 NILLPRPGFPI------YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP--CGNVYSYQHLQK  197 (415)
Q Consensus       126 ~vi~~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np--tG~~~~~~~l~~  197 (415)
                      +|+++...+..      +.......|++++.++.+.    ..++++++++++++|+++++++++||  +|..- ..++++
T Consensus       167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~-~~dl~e  241 (464)
T PRK04311        167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTK-EVSLAE  241 (464)
T ss_pred             EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCC-cCCHHH
Confidence            99999864431      2345677899998887532    25789999999999999999999998  35321 146899


Q ss_pred             HHHHHhhcCcEEEEccccCCcc----cCCCCcccccc---cCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          198 LAETANKLKTLVIADEVYGHLV----FGDKPFVPMGV---FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       198 i~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      |+++|+++|+++++|...+.+.    ++-.....+..   .+.+   ++++|.+|.++.+  ..|++++++        +
T Consensus       242 I~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaD---iv~fSg~K~LgGp--~~G~i~g~~--------~  308 (464)
T PRK04311        242 LAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVD---LVTFSGDKLLGGP--QAGIIVGKK--------E  308 (464)
T ss_pred             HHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCc---EEEecCcccccCC--ceEEEEEcH--------H
Confidence            9999999999999999654331    11001111222   2333   8889999987655  488888854        5


Q ss_pred             HHHHHHhhc-cccCCchhHHHHH----HHHhhCCCc-------HHHHHHHHHHHHHHHHHHHHHhhcCC--CC--cCC-C
Q 014936          271 VVERMKKYF-DILGDPATFIQAA----VPSILQQPD-------EVFFKKTLNLLKQSVDICYNKIKEIP--CI--SCP-H  333 (415)
Q Consensus       271 ~~~~~~~~~-~~~~~~~~~~~~a----~~~~l~~~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~--~~--~~~-~  333 (415)
                      ++++++... ............+    +..++....       -.-+....++++++.+.+.+.|+..+  ++  .+. .
T Consensus       309 li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~  388 (464)
T PRK04311        309 LIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPS  388 (464)
T ss_pred             HHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEc
Confidence            666665321 1011112222222    222222110       01233344677778888888887643  21  111 0


Q ss_pred             --------CCCCceE-EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHH
Q 014936          334 --------KPEGSMA-VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKS  403 (415)
Q Consensus       334 --------~p~~g~~-~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~  403 (415)
                              .|...+. +-+.++..   + .+..++... |++....+..-   -.++.+.+.+ +..+++++..+++|.+
T Consensus       389 ~~~~gggs~p~~~~~~~~v~~~~~---~-~~~~~l~~~-lr~~~~~i~~r---~~~~~~~ld~r~~~~~~~~~~~~~~~~  460 (464)
T PRK04311        389 FSQVGGGSLPVDRLPSAAVTLTPK---D-RSLEALAAR-LRLLPPPVIGR---IEDGRLLLDLRTLEEEDEERLAAALLE  460 (464)
T ss_pred             cCccCCCCCcCCCCCeEEEEEeCC---C-CCHHHHHHH-HhcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHHHH
Confidence                    1111111 11223221   1 134555444 46644333221   1257788888 5788899999999887


Q ss_pred             HHH
Q 014936          404 FYQ  406 (415)
Q Consensus       404 ~~~  406 (415)
                      ++.
T Consensus       461 ~~~  463 (464)
T PRK04311        461 ALN  463 (464)
T ss_pred             Hhh
Confidence            753

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.77  E-value=2.4e-15  Score=143.99  Aligned_cols=354  Identities=16%  Similarity=0.107  Sum_probs=205.4

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~  110 (415)
                      .+|+.++||..|.-.... --.+|++.+++++++.........  ....+.+..+|+.+.+..+..... ..++++++|+
T Consensus        55 ~dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGs  131 (459)
T PRK06931         55 VEGNQYLDCLAGAGTLAL-GHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGA  131 (459)
T ss_pred             CCCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcH
Confidence            347889999888532211 124789999999988743211111  112355556666665433211111 2346668999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCC--CCC----CChhHH---
Q 014936          111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE----VDLDDI---  166 (415)
Q Consensus       111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~----~~~~~l---  166 (415)
                      +|++.+++...  ....+|+....+|++....+...+.             .+..++.....  .++    -+.+.+   
T Consensus       132 EAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (459)
T PRK06931        132 DAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYY  211 (459)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence            99999998754  2235799999999987766543211             12222211000  000    012222   


Q ss_pred             -HhhcC-----CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936          167 -ESLAD-----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (415)
Q Consensus       167 -~~~~~-----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  238 (415)
                       ++.++     ....+.+|..| +...|.+ .|.+.++++.++|++||+++|.||++.++...|.. .....++..+.++
T Consensus       212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~-~a~~~~gv~PDiv  290 (459)
T PRK06931        212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKM-FAFEHAGIEPDII  290 (459)
T ss_pred             HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchH-HHhhhcCCCCCEE
Confidence             23322     12355677777 4445654 67899999999999999999999999987655542 1222233333333


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD  317 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  317 (415)
                         +++|.+ ..|+++|.++.++        + ++.+... ...++..++++.+++.+.|+...++   +..++.++.-+
T Consensus       291 ---t~gK~l-~gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~~---~l~~~~~~~G~  354 (459)
T PRK06931        291 ---VMSKAV-GGGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKEE---NLAQNAAERGE  354 (459)
T ss_pred             ---Eecccc-cCCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHH
Confidence               568995 5679999988754        2 2444222 2235678999999888888653221   22333333334


Q ss_pred             HHHHHhh----cCCCCcCCCCCCCceEEEEecCccc-cC----CCC-C---HHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936          318 ICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSL-LD----DII-D---DIDFCFKLAKEESVIILPGTAVGLKNWLR  384 (415)
Q Consensus       318 ~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~-~~----~~~-~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iR  384 (415)
                      ++.+.|+    +.|.+.  ....-|+++-+.+.... ..    ... +   ...+... +.++||.+.+....  .+.+|
T Consensus       355 ~l~~~L~~l~~~~~~i~--~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~~~--~~~l~  429 (459)
T PRK06931        355 WLKAQLAELQKRYPCIG--NVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKA-CFENGLLLERGGRN--GNVVR  429 (459)
T ss_pred             HHHHHHHHHHHhCCCeE--eEecCceEEEEEEccCcccccccccCCccHHHHHHHHHH-HHHCCcEEeecCCC--CCEEE
Confidence            4444443    444332  13455777777663211 00    000 1   1233344 45679999775322  36788


Q ss_pred             EEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936          385 VTF--AVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       385 i~~--~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      +.+  ..+++++++++++|.+++++..+
T Consensus       430 ~~Ppl~it~~eid~~~~~l~~~l~~~~~  457 (459)
T PRK06931        430 LLPPLLITQAECEEFIDRFEQALLAAVK  457 (459)
T ss_pred             EECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence            887  47999999999999999987654

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.77  E-value=2e-16  Score=139.24  Aligned_cols=342  Identities=17%  Similarity=0.117  Sum_probs=221.1

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+++.++|+-.|...... --.+|.+.+++.+++..-  ....|..+ -..++.+.+++.+      +-+-+.++++|++
T Consensus        47 e~G~ryLD~f~Gi~tvsl-GHchP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~vfF~nsG  118 (442)
T KOG1404|consen   47 EEGRRYLDAFGGIVTVSL-GHCHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVVFFVNSG  118 (442)
T ss_pred             CCCceeehhhCCeEEEEc-CCCChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEEEEecCC
Confidence            357788888888644321 235799999998887542  23455553 3578888888887      3455679999999


Q ss_pred             HHHHHHHHHHhc-CCC-CEEEEcCCCCcchHHHHHhC-CCeEEEe--ecc---------C--CC-CCCCC---------h
Q 014936          110 TQAIDVAMALLS-RPG-ANILLPRPGFPIYELSAAFR-HIEVRHF--DLL---------P--DK-GWEVD---------L  163 (415)
Q Consensus       110 ~~al~~~~~~l~-~~g-d~vi~~~p~y~~~~~~~~~~-g~~~~~~--~~~---------~--~~-~~~~~---------~  163 (415)
                      ++|++++++... ..| -.||....+|++....+... +......  |..         |  .. -|+-+         .
T Consensus       119 sEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a  198 (442)
T KOG1404|consen  119 SEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYA  198 (442)
T ss_pred             chHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHH
Confidence            999999988754 112 36777778887655443222 2211111  100         0  00 01111         1


Q ss_pred             hHHHhhc---CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936          164 DDIESLA---DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (415)
Q Consensus       164 ~~l~~~~---~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  238 (415)
                      ++++..+   .+.+.+.++..+ +...|++ +++.-+++..++|+++|.++|.||++.++...| .   +..+...+-+-
T Consensus       199 ~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~---~wgfe~h~v~P  274 (442)
T KOG1404|consen  199 KELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-H---MWGFESHGVVP  274 (442)
T ss_pred             HHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-c---cccccccCCCc
Confidence            2333333   245566777777 5556765 888999999999999999999999999988776 3   44454444455


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                      -|-|++|. ...|+++|.+++..        ++.+-+.+..  ..+...+|++.++..+.|+...++.+.   +..+..-
T Consensus       275 DIvTmAKg-iGnG~Pl~AVvtt~--------EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~Lq---E~aa~vG  342 (442)
T KOG1404|consen  275 DIVTMAKG-IGNGFPLGAVVTTP--------EIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQ---ENAAEVG  342 (442)
T ss_pred             cHHHHHhh-ccCCCcceeeecCH--------HHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHH---HHHHHHH
Confidence            56699999 56779999999865        7888887664  345778999999888888764444444   4444455


Q ss_pred             HHHHHHhhcC----CCCcCCCCCCCceEEEEecCccccCCC--C-CHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936          317 DICYNKIKEI----PCISCPHKPEGSMAVMLKLNLSLLDDI--I-DDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--  387 (415)
Q Consensus       317 ~~l~~~l~~~----~~~~~~~~p~~g~~~~~~l~~~~~~~~--~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--  387 (415)
                      .+|.+.|.++    |-+- . ...-|+++=+++-..+.+..  + ....++.+.++++|+.|.-|..++.  .+||+.  
T Consensus       343 ~yl~~~l~~l~d~h~iIG-d-VRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~--vfriaPPl  418 (442)
T KOG1404|consen  343 SYLLEKLAALKDKHPIIG-D-VRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGN--VFRIAPPL  418 (442)
T ss_pred             HHHHHHHHHHhhcCCcee-e-cccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccce--EEEecCCe
Confidence            5555555543    3222 1 34557776665532221110  1 1234555566889999988877774  899998  


Q ss_pred             eCChhhHHHHHHHH
Q 014936          388 AVDPYSLEECLDRI  401 (415)
Q Consensus       388 ~~~~~~l~~~l~~l  401 (415)
                      ..+++|++.+++..
T Consensus       419 ciT~edi~f~~~~~  432 (442)
T KOG1404|consen  419 CITKEDIDFAVEYF  432 (442)
T ss_pred             eccHHHHHHHHHHH
Confidence            57999997776654

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.76  E-value=1e-16  Score=147.27  Aligned_cols=339  Identities=17%  Similarity=0.121  Sum_probs=194.0

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCC--cEEE-
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFV-  105 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~i-  105 (415)
                      +..++|-...      ...+|.+.+++...+.+.....|+      -..-..++++...+...+.++.  +++  .+-+ 
T Consensus        20 ~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~--~~~~w~anvq   91 (399)
T PF00464_consen   20 RSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGA--EPKEWYANVQ   91 (399)
T ss_dssp             HHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE--
T ss_pred             hcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCC--CcccceEEee
Confidence            4567776665      345788888877766543222222      2223345555555555554553  333  2322 


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-----H-----HhCCCeEEEeeccCCCCCCCChhHHHhhcCC-Cc
Q 014936          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-----A-----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NT  174 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-----~-----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~  174 (415)
                      ..+++.|+.+++.+|++|||+|+..++.+.++...     .     .....+...++++++ ...+|.+++++.++. ++
T Consensus        92 p~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kP  170 (399)
T PF00464_consen   92 PHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKP  170 (399)
T ss_dssp             -SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--
T ss_pred             cCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCC
Confidence            45678899999999999999999988877654321     1     223457778888764 457999999987765 56


Q ss_pred             eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      ++|++.....|.     .-+.+++.++|++.|.+++.|-+|..+. .+|.-+.|+..  .+   |+.+|.+|+  ++|.|
T Consensus       171 klIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~--AD---vvt~sThKt--l~GPr  238 (399)
T PF00464_consen  171 KLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY--AD---VVTGSTHKT--LRGPR  238 (399)
T ss_dssp             SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT--SS---EEEEESSGG--G-SSS
T ss_pred             CEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc--ce---EEEeecccc--ccccC
Confidence            666654333222     2457888888899999999999996544 44444445433  22   788899999  67888


Q ss_pred             EEEEEeeC------CCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936          254 LGWFVTTD------PCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       254 ~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                      -|.|.+++      ......++++.+++.......  +++......+.+.++.+.....+++..+++.++.+.|.+.|.+
T Consensus       239 ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~  318 (399)
T PF00464_consen  239 GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE  318 (399)
T ss_dssp             -EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            89999871      000000247888888764433  2333333344444444322345688999999999999999999


Q ss_pred             CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----CCCeEEEEee------CChhhH
Q 014936          326 IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----LKNWLRVTFA------VDPYSL  394 (415)
Q Consensus       326 ~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~~------~~~~~l  394 (415)
                      . |+.++........+|+++....     .+...+...|++.||.+..-..++     ....|||+..      ..++++
T Consensus       319 ~-G~~v~~ggTd~H~vlvd~~~~~-----~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm  392 (399)
T PF00464_consen  319 R-GFKVVTGGTDNHQVLVDLRSFG-----IDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDM  392 (399)
T ss_dssp             T-T-EEGGGS-SSSEEEEEGGGGT-----S-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHH
T ss_pred             C-CcEEEECCCCCCeEEEEecccc-----cchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHH
Confidence            8 8885544556778888886421     133446677799999986432222     2578999982      345666


Q ss_pred             HHHHHH
Q 014936          395 EECLDR  400 (415)
Q Consensus       395 ~~~l~~  400 (415)
                      ++..+.
T Consensus       393 ~~iA~~  398 (399)
T PF00464_consen  393 KEIAEL  398 (399)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            665543

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.76  E-value=1.7e-16  Score=147.83  Aligned_cols=313  Identities=16%  Similarity=0.093  Sum_probs=191.1

Q ss_pred             CCCcHHHHHHHHHHHhcCC-CCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEe-CChHHHHHHHHHHhcCCCC
Q 014936           51 FHTTHVATEAVAEALLSEK-FNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVT-SGCTQAIDVAMALLSRPGA  125 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~-~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~-~g~~~al~~~~~~l~~~gd  125 (415)
                      ...++++++++.+....-. .....  ...-+.+.|+.+++++      ++++ .+|+++ +|+|.++++++..+..+ +
T Consensus        12 ~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~   84 (361)
T TIGR01366        12 SKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELF------SLPDGYEVILGNGGATAFWDAATFGLIEK-K   84 (361)
T ss_pred             cCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchhHHHHHHHHhcccc-c
Confidence            4567888888764310000 00111  1234567788888887      3433 478876 55999999999998743 3


Q ss_pred             EEEEcCCCCcc-hHHHHHhC--CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936          126 NILLPRPGFPI-YELSAAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA  202 (415)
Q Consensus       126 ~vi~~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~  202 (415)
                      .+++..-.|.. +.+.+...  +.++..++.+.  +..++     ..+.+++++|.+++.+|.||...|.+++      +
T Consensus        85 ~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~lV~~~h~et~tG~~~pi~~I------~  151 (361)
T TIGR01366        85 SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPE-----PQADPGVDVIAWAHNETSTGVAVPVRRP------E  151 (361)
T ss_pred             ccEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCC-----CccCCCCCEEEEcccCCccceecccccc------c
Confidence            33444444542 33344431  23566665432  22222     2356789999999999999999876554      4


Q ss_pred             hhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh-----
Q 014936          203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-----  277 (415)
Q Consensus       203 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-----  277 (415)
                      +++|+++++|.+++.    +..+..+...  +   ++++|.+|+++.+|. ++.++.++        +.++++..     
T Consensus       152 ~~~g~~~iVDavqs~----g~~~idv~~~--D---~~~~s~~K~lg~~~G-l~~~~~s~--------~~~~~~~~~~~~~  213 (361)
T TIGR01366       152 GSDDALVVIDATSGA----GGLPVDIAET--D---VYYFAPQKNFASDGG-LWLAIMSP--------AALERIEAIAASG  213 (361)
T ss_pred             ccCCCeEEEEcCccc----cCCCCCHHHC--C---EEEEEchhhcCCCCc-eEEEEECH--------HHHhhhhcccCCC
Confidence            789999999999998    3344444432  2   678899999988742 55545543        22222221     


Q ss_pred             ---------------h--ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---
Q 014936          278 ---------------Y--FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---  336 (415)
Q Consensus       278 ---------------~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---  336 (415)
                                     .  ....++++.....++.++++...+. .++...++.++..+++.+.+++++.+..+....   
T Consensus       214 ~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~  293 (361)
T TIGR01366       214 RWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKR  293 (361)
T ss_pred             CCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhc
Confidence                           0  0112344444444555555543333 367778999999999999999886555331111   


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      ......+.++.    + .+..++...+ +++||.+.++...-....+|+|+.  ++.++++.+++.|++++++
T Consensus       294 s~~v~~v~~~~----g-~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~  360 (361)
T TIGR01366       294 SQVVGTIDFVD----D-IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER  360 (361)
T ss_pred             ccceEEEECCC----c-cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence            11112223332    2 2556665665 667999977642222568999993  6899999999999998765

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.76  E-value=7.4e-16  Score=141.86  Aligned_cols=349  Identities=18%  Similarity=0.149  Sum_probs=218.2

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC---CCCCCCCcHHHHHHHHHHHhhhCCCC-CCCCcEEEeCC
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSG  108 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~i~~g  108 (415)
                      +|+.++|-.+|-=-... ---++++.+|+.+++..-.+.   .+...+ -.+|-+.|++..      + -+-++|++++|
T Consensus        42 ~G~r~lDg~sg~W~~~~-Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a------P~~~l~~vFf~~s  113 (449)
T COG0161          42 DGRRYLDGMSGLWCVNH-GHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA------PEGGLDHVFFTDS  113 (449)
T ss_pred             CCCEEEecccHHHHhhc-CcCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC------CCCCccEEEEeCC
Confidence            46677776555300000 113688999999988753221   111211 355666666655      2 23579999999


Q ss_pred             hHHHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccCC------CCCC
Q 014936          109 CTQAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPD------KGWE  160 (415)
Q Consensus       109 ~~~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~------~~~~  160 (415)
                      ||+|++++++...       +|. .++|.-..+|++-.-.+...|.              .+..++....      +.+.
T Consensus       114 GSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~  193 (449)
T COG0161         114 GSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGD  193 (449)
T ss_pred             chHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCCh
Confidence            9999999999864       233 2488888899864333322221              1112222110      1111


Q ss_pred             ----CChhHHHhhcCC---CceEEEecCC--CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc
Q 014936          161 ----VDLDDIESLADQ---NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (415)
Q Consensus       161 ----~~~~~l~~~~~~---~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  230 (415)
                          -..++|++.+..   .+.+.+|..|  ...+|+. +|+.-++++.++|++||+++|.||+-.+|...|..+.. ..
T Consensus       194 ~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~  272 (449)
T COG0161         194 EEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EH  272 (449)
T ss_pred             HHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hh
Confidence                124556666643   5677888888  3447765 67778999999999999999999999998888765432 22


Q ss_pred             cCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHH
Q 014936          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVF  304 (415)
Q Consensus       231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~  304 (415)
                      .+..+.++   +++|.+..+-+++|.+++++        ++.+.+...      ..++++.+|++.+++.+-|+-..+  
T Consensus       273 ~gi~PDi~---~~aKGLT~GY~Pl~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~--  339 (449)
T COG0161         273 AGIVPDIL---CLAKGLTGGYLPLSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEE--  339 (449)
T ss_pred             cCCCCCee---eecccccccchhhHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHh--
Confidence            22222333   56899877778999988866        677777653      124578899999988888765321  


Q ss_pred             HHHHHHHHHHHHHHHHHHhhc-C---CCCcCCCCCCCceEEEEecCccccCCC---CCHHHHHHHHHhhcCeEEEcCCCC
Q 014936          305 FKKTLNLLKQSVDICYNKIKE-I---PCISCPHKPEGSMAVMLKLNLSLLDDI---IDDIDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~~-~---~~~~~~~~p~~g~~~~~~l~~~~~~~~---~~~~~~~~~ll~~~gi~v~~g~~~  377 (415)
                       +.+.++.++.-.++.+.|+. +   |.+. - ...-|++.-+++...+-...   ......+...+.++|+.++|..  
T Consensus       340 -e~l~~~~~~~~~~l~~~L~~~l~~~p~Vg-d-VR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g--  414 (449)
T COG0161         340 -EDLLERVAEIGAYLQAGLQAALADHPLVG-D-VRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG--  414 (449)
T ss_pred             -cCHHHHHHHHHHHHHHHHHHhcccCCcEE-E-eeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC--
Confidence             23445555555556666654 3   3333 1 34567777777644221100   0123344555567899999973  


Q ss_pred             CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHH
Q 014936          378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                         ..+=++.  ..++++++++++++.+++++..+.
T Consensus       415 ---~~i~~~PPliit~~eid~l~~~l~~al~~~~~~  447 (449)
T COG0161         415 ---DVIYLMPPLIITREEIDELVDALREALDETLAD  447 (449)
T ss_pred             ---CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence               3445554  579999999999999999876553

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.75  E-value=3.1e-15  Score=127.87  Aligned_cols=279  Identities=17%  Similarity=0.152  Sum_probs=196.2

Q ss_pred             CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEE
Q 014936          101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL  177 (415)
Q Consensus       101 ~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v  177 (415)
                      .-+++..+|+.+++.++-.++.|||+|++..-+-.+  ..++++.+|++|..++.+.  +....++.+.+.+.. +++++
T Consensus        69 ~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh~p~~v  146 (385)
T KOG2862|consen   69 QTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQHKPKAV  146 (385)
T ss_pred             ceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhcCCceE
Confidence            455667778999999999999999999877655443  5678899999999997653  456899999998876 47889


Q ss_pred             EecCCCCccccCCCHHH-HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC-CceEE
Q 014936          178 VIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLG  255 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G  255 (415)
                      ++++....||+.   .+ +..+-++|++|+.++++|.+-+...    ....+..++-+  +.+.+ -.|++++| |  ++
T Consensus       147 fv~hgdsSTgV~---q~~~~~~g~lc~k~~~lllVD~VaSlgg----t~F~mDewgVD--vaytg-SQKaL~aP~G--Ls  214 (385)
T KOG2862|consen  147 FVTHGDSSTGVL---QDLLAISGELCHKHEALLLVDTVASLGG----TEFEMDEWGVD--VAYTG-SQKALGAPAG--LS  214 (385)
T ss_pred             EEEecCcccccc---chHHHHHHHHhhcCCeEEEEechhhcCC----ccceehhhccc--EEEec-chhhcCCCCC--cc
Confidence            999999999999   55 6667788999999999999988622    22233444433  44444 47998764 5  33


Q ss_pred             EEEeeCCCCCCChHHHHHHHHhhcc------------------------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936          256 WFVTTDPCGMFRKPKVVERMKKYFD------------------------ILGDPATFIQAAVPSILQQPDEVFFKKTLNL  311 (415)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  311 (415)
                      -+..++        ....+++..+.                        +..+++....+.+.++|....++.+++..++
T Consensus       215 iisfS~--------ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~r  286 (385)
T KOG2862|consen  215 IISFSD--------KALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRR  286 (385)
T ss_pred             eeecCH--------HHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344433        23333333211                        1234555556666666665556889999999


Q ss_pred             HHHHHHHHHHHhhcCCCCcCCCCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-
Q 014936          312 LKQSVDICYNKIKEIPCISCPHKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-  387 (415)
Q Consensus       312 ~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-  387 (415)
                      .++..+.+...|+++ |++.....+.   .-...+..+..     .|-.+.+..+..++++.+..|-.......+||.+ 
T Consensus       287 H~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~g-----vDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~  360 (385)
T KOG2862|consen  287 HREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYG-----VDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLL  360 (385)
T ss_pred             HHHHHHHHHHHHHHh-CccceecChhhccCcceeeecCCC-----CCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEe
Confidence            999999999999987 5553222111   11222333332     3677888888777788887766666678999999 


Q ss_pred             e--CChhhHHHHHHHHHHHHHH
Q 014936          388 A--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       388 ~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      +  .+-|.++..++.|+..+++
T Consensus       361 gcna~~e~i~~v~~ll~~alq~  382 (385)
T KOG2862|consen  361 GCNANVEYIDNVVELLKLALQR  382 (385)
T ss_pred             eccCCcHHHHHHHHHHHHHHhh
Confidence            4  3568999999998888765

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.75  E-value=1.9e-16  Score=136.12  Aligned_cols=339  Identities=19%  Similarity=0.166  Sum_probs=220.3

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      |+.++||=.+...... --.+|.+.+++++..+.-.+   ..|.+  -..++.+.+++++        .-+.++-++.|.
T Consensus        58 Gk~ylDflsaysaVnq-Ghchpki~~aLqeq~~kLtlssrafYnd--~~~~f~~~vt~lf--------~~~kvlpmnTGa  126 (427)
T KOG1402|consen   58 GKEYLDFLSAYSAVNQ-GHCHPKIIKALQEQADKLTLSSRAFYND--VLGEFAEYVTKLF--------GYDKVLPMNTGA  126 (427)
T ss_pred             ccchhhhhhhhhhccc-CCCCHHHHHHHHHHHhHhhhhhHHHhhh--hHHHHHHHHHHhc--------Ccceeeecccch
Confidence            5566666555432222 23578999999988764221   23443  2356777777776        467888899999


Q ss_pred             HHHHHHHHHhcC--------C-C-CEEEEcCCCCcchHHHHHhCCCeEEEee----ccCCCC---CCCChhHHHhhcCCC
Q 014936          111 QAIDVAMALLSR--------P-G-ANILLPRPGFPIYELSAAFRHIEVRHFD----LLPDKG---WEVDLDDIESLADQN  173 (415)
Q Consensus       111 ~al~~~~~~l~~--------~-g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~----~~~~~~---~~~~~~~l~~~~~~~  173 (415)
                      +|.+.++....+        | . ..|+....+|++-.-.+...+.+...+.    .-|...   ---|.++|+..++..
T Consensus       127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~  206 (427)
T KOG1402|consen  127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKSP  206 (427)
T ss_pred             hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcCC
Confidence            999999988652        2 1 2344445555543222222222221100    000000   012799999999887


Q ss_pred             ceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCC
Q 014936          174 TVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVP  250 (415)
Q Consensus       174 ~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~  250 (415)
                      ..+-+++.| +...|++ .|..-+++..++|.+||+++|.||++.++..+|+-.. ......+  .+|.   +.|+++.+
T Consensus       207 ~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~P--Divi---lgKalSGG  281 (427)
T KOG1402|consen  207 NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRP--DIVI---LGKALSGG  281 (427)
T ss_pred             CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCC--CeEE---EeccccCC
Confidence            777888999 7778876 5667799999999999999999999999887775321 1112222  2333   56997655


Q ss_pred             CceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 014936          251 GWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP--  327 (415)
Q Consensus       251 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--  327 (415)
                      =++++.+++.+        +++-.++... ..+++.||++.+++.++|+...   -+++.++.++.-+.+..+|++++  
T Consensus       282 ~~Pvsavl~~~--------~im~~~~pgeHgsTyggNpLg~~vaiAalevi~---eekL~era~~lG~~l~~~L~~l~~~  350 (427)
T KOG1402|consen  282 VYPVSAVLADD--------DIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV---EEKLVERAAKLGEILRDQLNKLQKK  350 (427)
T ss_pred             eeeeEEEEecH--------HHHhccCCCccccccCCChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcccc
Confidence            57899999866        5666665543 2457789999999988887532   34556666777777788887763  


Q ss_pred             --CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936          328 --CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS  403 (415)
Q Consensus       328 --~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~  403 (415)
                        .+- .....-|++.-+.+...+..+. +.-+.+.. +++.|+..-|-.    .+.||++.  ..+++++++.++.|.+
T Consensus       351 ~p~~v-~~VRGrGl~~ai~i~~~~~~~~-~aw~~cl~-lk~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k  423 (427)
T KOG1402|consen  351 FPHVV-KEVRGRGLLNAIVINPSKTSGQ-DAWDVCLA-LKENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEK  423 (427)
T ss_pred             ccchh-heeeccceEEEEEeccccccch-hHHHHHHc-ccccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHH
Confidence              222 2245568888777764433222 44455554 477888877654    46899998  5799999999999988


Q ss_pred             HHH
Q 014936          404 FYQ  406 (415)
Q Consensus       404 ~~~  406 (415)
                      .+.
T Consensus       424 ~i~  426 (427)
T KOG1402|consen  424 TIA  426 (427)
T ss_pred             Hhc
Confidence            763

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.74  E-value=3.3e-15  Score=142.52  Aligned_cols=343  Identities=14%  Similarity=0.149  Sum_probs=194.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHH--HHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATE--AVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~--a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +|+.++|+..|.-.... --.+|.+.+  ++++++..-.+..........+....+++.+.+..+ +-..+.++++++|+
T Consensus        43 dG~~ylD~~~g~~~~~l-Gh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGs  120 (443)
T PRK08297         43 TGRRYLDMFTFFASSAL-GMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGA  120 (443)
T ss_pred             CCCEeeecccCHhhhcC-CCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchH
Confidence            47888898777422111 124688988  888887642110000000011233334444432211 11346999999999


Q ss_pred             HHHHHHHHHhc--------CCC------CEEEEcCCCCcchHHHHHhCCC-eE-E----------EeeccCC----CCCC
Q 014936          111 QAIDVAMALLS--------RPG------ANILLPRPGFPIYELSAAFRHI-EV-R----------HFDLLPD----KGWE  160 (415)
Q Consensus       111 ~al~~~~~~l~--------~~g------d~vi~~~p~y~~~~~~~~~~g~-~~-~----------~~~~~~~----~~~~  160 (415)
                      +|++.+++...        ..|      .+|+....+|++....+..... .. .          .++....    .+..
T Consensus       121 EAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (443)
T PRK08297        121 LAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGED  200 (443)
T ss_pred             HHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccc
Confidence            99999999873        112      5799999999987665543321 10 0          0100000    0000


Q ss_pred             ---C------ChhHHHhhcCC--CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          161 ---V------DLDDIESLADQ--NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       161 ---~------~~~~l~~~~~~--~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                         .      +++.+++.+..  ...+.++..| ....|. ..|.+.+++|.++|++||+++|.||++.++...|.... 
T Consensus       201 ~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-  279 (443)
T PRK08297        201 LEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWA-  279 (443)
T ss_pred             cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHH-
Confidence               0      23445555542  3455666777 444565 47889999999999999999999999998765554221 


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH----HH--hhccccCCchhHHHHHHHHhhCCCc
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER----MK--KYFDILGDPATFIQAAVPSILQQPD  301 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~a~~~~l~~~~  301 (415)
                      ...++..+.++   +++|.++     +|.+++.+        ++.+.    +.  .....+++.++++..++.+.|+...
T Consensus       280 ~~~~gv~PDiv---~~gK~l~-----~~a~l~~~--------~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~  343 (443)
T PRK08297        280 YQQLGVRPDIV---AFGKKTQ-----VCGIMAGR--------RVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIE  343 (443)
T ss_pred             HHhcCCCCCEE---Eeccccc-----ccceecch--------HHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHH
Confidence            12222222333   5789853     23344432        22211    11  1122355678889888888886432


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhh----cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIK----EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~  377 (415)
                      ++   +..++.++.-+++.+.|+    +.|.+. ......|.++.+.++..     .....+...+ .++||.+.|+.  
T Consensus       344 ~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~-~~vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gvl~~~~~--  411 (443)
T PRK08297        344 ED---GLVENAARQGEYLLARLEELAAEFPAVV-SNVRGRGLMCAFDLPTT-----ADRDEVIRRL-WEEGVLVLPCG--  411 (443)
T ss_pred             hc---CHHHHHHHHHHHHHHHHHHHHHHCCCcc-eeeeccceEEEEEecCH-----HHHHHHHHHH-HHCCEEEecCC--
Confidence            11   233344444444444443    344332 11234477777777531     1133555555 46799998753  


Q ss_pred             CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                        ...+|+++  .++++++++++++|.++++++
T Consensus       412 --~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        412 --ERSIRFRPALTVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             --CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence              25688866  578999999999999988754

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.74  E-value=1.9e-15  Score=144.09  Aligned_cols=332  Identities=16%  Similarity=0.119  Sum_probs=187.0

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++|+..|.-.... --.+|.+.+++++++.....  +..+ ....++.+.+++.+    +   ..+.++++++|+
T Consensus        45 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~----p---~~~~v~f~~sGs  114 (431)
T PRK06209         45 VDGNEYIEYGMGLRAVGL-GHAYPPVVEAVREALQDGCN--FTRPSAIELDAAESFLELI----D---GADMVKFCKNGS  114 (431)
T ss_pred             CCCCEEEEccccccchhc-CCCCHHHHHHHHHHHHhCcC--CCCCCHHHHHHHHHHHHhC----C---ccceEEEecCHH
Confidence            358889999877532221 12478999999999886432  3221 11123455555543    1   136899999999


Q ss_pred             HHHHHHHHHhc-CCC-CEEEEc-CCCCcchHHHHH-----hCCCe------EEEeeccCCCCCCCChhHHHhhcCC--Cc
Q 014936          111 QAIDVAMALLS-RPG-ANILLP-RPGFPIYELSAA-----FRHIE------VRHFDLLPDKGWEVDLDDIESLADQ--NT  174 (415)
Q Consensus       111 ~al~~~~~~l~-~~g-d~vi~~-~p~y~~~~~~~~-----~~g~~------~~~~~~~~~~~~~~~~~~l~~~~~~--~~  174 (415)
                      +|++.+++... -.| ..|+.. .-+|++......     ..|..      +..++       -.|++++++.++.  ..
T Consensus       115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~  187 (431)
T PRK06209        115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-------YNDIASLEALFEDHPGR  187 (431)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-------CCCHHHHHHHHHhCCCC
Confidence            99999999754 123 345554 233332211110     00110      11111       1278888887753  34


Q ss_pred             eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       175 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      .+.+++.|-  .|...+.+.+++|.++|++||+++|+||++.++...+.....  .++..+.   +.+++|.++ .|+.+
T Consensus       188 ~aavi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~--~~gv~PD---i~t~gK~lg-gG~p~  259 (431)
T PRK06209        188 IACVILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK--LYGIVPD---LSCFGKALG-NGFAV  259 (431)
T ss_pred             EEEEEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH--HhCCCcc---eeeehhhhc-CCccc
Confidence            556677774  344778899999999999999999999999776433211111  1222222   357899965 56889


Q ss_pred             EEEEeeCCCCCCChHHHHHH--HHh---h----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh-
Q 014936          255 GWFVTTDPCGMFRKPKVVER--MKK---Y----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK-  324 (415)
Q Consensus       255 G~~~~~~~~~~~~~~~~~~~--~~~---~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~-  324 (415)
                      |++++++        ++.+.  +..   .    ...+.+++++..+++.+.|+...++   ...++++++.+++.+.|+ 
T Consensus       260 ~av~~~~--------~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~  328 (431)
T PRK06209        260 SALAGKR--------EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDE---DVIERLHEQGAKLAAGVNE  328 (431)
T ss_pred             EEEEEHH--------HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHH
Confidence            9999865        56554  211   0    1224456778888777777643221   233444444444444443 


Q ss_pred             ---cCCCCcCCCCCCCceEEEEecCccccCCCCCH---HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHH
Q 014936          325 ---EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDD---IDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECL  398 (415)
Q Consensus       325 ---~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~---~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l  398 (415)
                         +++ +.......+..+.+..+.... .+....   ..+...+ .++||.+.         .++++..++++++++++
T Consensus       329 ~~~~~~-~~~~vr~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-~~~Gi~~p---------~l~is~~ht~~dId~~l  396 (431)
T PRK06209        329 AAAEHG-LQDHVRVSGRPCCLTYSTLDG-NGQPSQAFRTLFLQET-IRRGVLMP---------SLVVSYAHGDADIERTI  396 (431)
T ss_pred             HHHhCC-CCeEEEeecceEEEEEecCCc-ccCCcHHHHHHHHHHH-HHCCcccc---------cccccccCCHHHHHHHH
Confidence               342 221111122222211111100 000111   1344454 56699762         25677678999999999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          399 DRIKSFYQRHAKQ  411 (415)
Q Consensus       399 ~~l~~~~~~~~~~  411 (415)
                      ++|.+++.+.++.
T Consensus       397 ~~l~~~l~~~~~~  409 (431)
T PRK06209        397 DAVHGALGVYRKA  409 (431)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987543

>PLN02263 serine decarboxylase

Probab=99.74  E-value=2.6e-14  Score=134.10  Aligned_cols=296  Identities=14%  Similarity=0.035  Sum_probs=202.0

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP  155 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~  155 (415)
                      +..++++.+-+|+.+.+|.+-+.-.-++|+|||+++..++.+..+  +...+++++.+|+++.+.++..|++++.+|++ 
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d-  208 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL-  208 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence            568999999999998888542222358899999999998888754  23478899999999999999999999999985 


Q ss_pred             CCCCCCChhHHHhhcCCC---ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCc-----EEEEccccCCcccCCCCccc
Q 014936          156 DKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKT-----LVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       156 ~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~~~~~~  227 (415)
                       .++.+|+++|++++.++   +.+|+.+-++.++|.+   +++.+|+++|+++|+     |+++|.+|+++...-....+
T Consensus       209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~  284 (470)
T PLN02263        209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP  284 (470)
T ss_pred             -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence             45679999999988654   3445566678899999   999999999999997     99999999887642111111


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------cccc--CCchhHHHHHHHHhhCC
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------FDIL--GDPATFIQAAVPSILQQ  299 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~a~~~~l~~  299 (415)
                      ...+.....-| ..+.+|+ +...+..|.++.++.        ..+.+...      ...+  ++-+......+...|..
T Consensus       285 ~~df~~~vDSI-svD~HK~-l~~P~~cgvll~R~~--------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~  354 (470)
T PLN02263        285 KVTFKKPIGSV-SVSGHKF-VGCPMPCGVQITRME--------HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR  354 (470)
T ss_pred             ccCCCcCccEE-EECCccc-cCCCcCEEEEEEehh--------hHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH
Confidence            11111111224 4478998 667778999998752        22222110      0011  11111122333444555


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC
Q 014936          300 PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL  379 (415)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~  379 (415)
                      ...+.+.++.++..++++++.+.|++. ++..+..|... .+.++-+        .+..      ...|..+.+-     
T Consensus       355 ~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~-~V~f~~p--------~~~~------~~~gW~L~~~-----  413 (470)
T PLN02263        355 KGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSS-TVVFERP--------KDEE------FVRRWQLACQ-----  413 (470)
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCce-EEEEecC--------chHH------hhcceEEccC-----
Confidence            556889999999999999999999988 66645556544 3333322        1111      1236665542     


Q ss_pred             CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936          380 KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       380 ~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      +..+++++.  .+.+.++++++.|++..+.+.
T Consensus       414 ~~~~Hivvmphv~~~~id~fi~DL~~~~~~~~  445 (470)
T PLN02263        414 GNIAHVVVMPSVTIEKLDYFLKELVEKRSTWY  445 (470)
T ss_pred             CCcEEEEEcCCCCHHHHHHHHHHHHHHHhhhh
Confidence            356899883  578999999999988877543

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.73  E-value=9.8e-15  Score=149.17  Aligned_cols=342  Identities=15%  Similarity=0.109  Sum_probs=208.1

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ...+|-+++..      ....+.+...+..   ...+..|.|.      .|..++...+.+++.+..|.    +++-+..
T Consensus       498 ~~~~i~lGsct------~~~~p~~~~~~~~---~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~----d~~sl~~  564 (954)
T PRK05367        498 DRSMIPLGSCT------MKLNAAAEMIPIT---WPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGY----DAVSLQP  564 (954)
T ss_pred             ccceeeCCcCC------CcCCHHHHHHHHh---CccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCC----CCEEECc
Confidence            34567777743      2234544443322   2223334432      34567777777777765552    3565555


Q ss_pred             -ChHHHHHHHHHHhc----CCCC----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---Cce
Q 014936          108 -GCTQAIDVAMALLS----RPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTV  175 (415)
Q Consensus       108 -g~~~al~~~~~~l~----~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~  175 (415)
                       |++++..+.+.++.    ++|+    +|++++..|++....+...|.+++.++.+.  +..+|+++|++++++   ++.
T Consensus       565 ~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~--~G~iD~~~L~~~i~~~~~~la  642 (954)
T PRK05367        565 NAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDE--NGNIDLDDLRAKAEEHADNLA  642 (954)
T ss_pred             cHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCC--CCCcCHHHHHHHHhccCCCeE
Confidence             45555534333332    4565    599999999988888999999999998754  346999999998865   466


Q ss_pred             EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC----CC
Q 014936          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PG  251 (415)
Q Consensus       176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G  251 (415)
                      +|++++|++-.+..   +++++|+++|+++|+++++|.++......-.   ....++.+   ++..+++|+|+.    +|
T Consensus       643 ~V~it~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~GAD---i~~~s~HK~f~~P~G~GG  713 (954)
T PRK05367        643 AIMITYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDIGAD---VSHLNLHKTFCIPHGGGG  713 (954)
T ss_pred             EEEEEcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhhccCCC---ChhhcCCC---EEEecCcccCCCCcCCCC
Confidence            77888888754444   4689999999999999999999964322111   12234443   778889999752    34


Q ss_pred             ceEEEEEeeCCCCCCChHHHHHHHHhhc---------cccCCchhH----HHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936          252 WRLGWFVTTDPCGMFRKPKVVERMKKYF---------DILGDPATF----IQAAVPSILQQPDEVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~----~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  318 (415)
                      ..+|.+.+.+.        +...+....         ..+...++.    ....+..++.....+.+.+..+..-.++++
T Consensus       714 Pg~G~l~vr~~--------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Y  785 (954)
T PRK05367        714 PGVGPIGVKAH--------LAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANY  785 (954)
T ss_pred             CceEEEeeccc--------ccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence            45888887531        111111100         000111222    222233444444567788888888889999


Q ss_pred             HHHHhhcCCCCcCCCCCCC--ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhH
Q 014936          319 CYNKIKEIPCISCPHKPEG--SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSL  394 (415)
Q Consensus       319 l~~~l~~~~~~~~~~~p~~--g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l  394 (415)
                      +.+.|++...+. +..|.+  ..-+.+++...+.....+..++.++| .++|+.... ..|...+.+||++  ..+++||
T Consensus       786 l~~~L~~~~~~~-~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL-~d~G~~~~t-~~~pv~~~l~i~ptE~~s~~el  862 (954)
T PRK05367        786 IAKRLKDHYPVL-YTGANGRVAHECILDLRPLKESTGITVDDIAKRL-IDYGFHAPT-MSFPVAGTLMVEPTESESKAEL  862 (954)
T ss_pred             HHHHHHhhcCcc-ccCCCCCcccceEEEeecccccCCCCHHHHHHHH-HHCCCeEee-cCCccCCEEEEEeeecCCHHHH
Confidence            999997642333 212211  11122333211101011456677776 677998644 2344578899998  4788999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 014936          395 EECLDRIKSFYQRHAK  410 (415)
Q Consensus       395 ~~~l~~l~~~~~~~~~  410 (415)
                      +.+++.+..+.++..+
T Consensus       863 Dr~~~al~~i~~e~~~  878 (954)
T PRK05367        863 DRFCDAMIAIRAEIDE  878 (954)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999988877654

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.73  E-value=3e-16  Score=137.98  Aligned_cols=341  Identities=16%  Similarity=0.153  Sum_probs=226.3

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      .+|++++||++.+   +.++...+++++.....++..      .-.-|+...-+..+++.||+|+        ..++-++
T Consensus        91 i~G~~~~N~aS~N---fL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~--------G~E~aiv  159 (467)
T KOG1358|consen   91 IDGKDVLNFASAN---FLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM--------GTEDAIV  159 (467)
T ss_pred             ecCceeecccchh---hhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh--------CCcceee
Confidence            4688899999998   445777899999888887752      2235777777889999999998        4556666


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc-----------
Q 014936          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT-----------  174 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------  174 (415)
                      .+-+-+++..++.+++++||.|.+..-....+...++...-.+.++.++       |+++++..+.+.+           
T Consensus       160 Ys~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~  232 (467)
T KOG1358|consen  160 YSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKAL  232 (467)
T ss_pred             eccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhcccccc
Confidence            6777888888999999999999999999988888888888888887763       6677765553322           


Q ss_pred             -eEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC--CCcccccccCCCCCeEEEccCccccCCC
Q 014936          175 -VALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVP  250 (415)
Q Consensus       175 -~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~  250 (415)
                       +..+++.. .-++|.+   .++.+|+++..++...+|+||.++.+..+.  .+.......+..+-.++++|+.-+++..
T Consensus       233 ~Rrfiv~EGl~~N~g~i---~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~  309 (467)
T KOG1358|consen  233 TRRFIVVEGLYANTGDI---CPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASG  309 (467)
T ss_pred             ceEEEEEEeeccCCCcc---cccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccccc
Confidence             33333333 4468888   457788888889999999999999887664  4444444444334448888888886666


Q ss_pred             CceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936          251 GWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCI  329 (415)
Q Consensus       251 G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  329 (415)
                      |   |+.+++.  .+.    ..+++.-. ..++...++....++..++..  .++-....+.++.....+-+.|....++
T Consensus       310 G---gFc~G~~--~i~----~hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~  378 (467)
T KOG1358|consen  310 G---GFCAGKS--FIA----DHQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGF  378 (467)
T ss_pred             C---ceeecce--eeE----eeeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCce
Confidence            5   6666633  111    22333333 223445566666666666543  1333345556666666677777765556


Q ss_pred             cCCCCCCCceEEEEecCccccCCCCCH----HHHHHHHHhhcCeEEEcCCCC------CCCCeEEEEe--eCChhhHHHH
Q 014936          330 SCPHKPEGSMAVMLKLNLSLLDDIIDD----IDFCFKLAKEESVIILPGTAV------GLKNWLRVTF--AVDPYSLEEC  397 (415)
Q Consensus       330 ~~~~~p~~g~~~~~~l~~~~~~~~~~~----~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~--~~~~~~l~~~  397 (415)
                      .+...|. +..+.+.+..... ..++.    ++++...+.+ ++.+.....-      ..+..+||++  +.++++++++
T Consensus       379 ~v~~~~~-SPi~hl~l~~~~~-s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra  455 (467)
T KOG1358|consen  379 IVSGSPE-SPIIHLQLERSYG-SREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERA  455 (467)
T ss_pred             EEecCcC-Cceeeeeeccccc-chHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHH
Confidence            6333333 4455555543211 11122    2334444444 7777544332      2256899999  4789999999


Q ss_pred             HHHHHHHHHH
Q 014936          398 LDRIKSFYQR  407 (415)
Q Consensus       398 l~~l~~~~~~  407 (415)
                      .+.|++....
T Consensus       456 ~~~ik~~~~~  465 (467)
T KOG1358|consen  456 AELIKEVASA  465 (467)
T ss_pred             HHHHHHHHHh
Confidence            9999988764

>PLN02452 phosphoserine transaminase

Probab=99.71  E-value=1.7e-14  Score=133.50  Aligned_cols=328  Identities=13%  Similarity=0.073  Sum_probs=209.7

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCC-CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-----FNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      ..++|+-|-      ...++.|++++.+.+.+-.     .... .-.....++-+.+.+.+.+.++.+-+-+-+++..|+
T Consensus         7 ~~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsg   80 (365)
T PLN02452          7 RVFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGA   80 (365)
T ss_pred             ceEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCcc
Confidence            467888874      5567899999887653200     0001 111223344444445554444532222345677889


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCC--CCCChhHHHhhcCCCceEEEecCCCCc
Q 014936          110 TQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKG--WEVDLDDIESLADQNTVALVIINPGNP  185 (415)
Q Consensus       110 ~~al~~~~~~l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p~np  185 (415)
                      |.++++++..++.+|+++++...++++  +.+.++.+|...+.... +..+  ..+++++++.  +++.+.+.+++....
T Consensus        81 t~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~hnETs  157 (365)
T PLN02452         81 STQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICANETI  157 (365)
T ss_pred             HHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECCCCCC
Confidence            999999999999999988888777665  45567778864333321 1121  1356666532  345677888888889


Q ss_pred             cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936          186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (415)
Q Consensus       186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  265 (415)
                      ||+.++  +++++.      ++++++|.+.+.    +..+..+..++     +...|..|.+|.+|  +|.+++++    
T Consensus       158 tGv~~~--~~~~i~------~~~lvVDa~Ss~----g~~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~----  214 (365)
T PLN02452        158 HGVEFK--DYPDVG------NVPLVADMSSNF----LSKPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRK----  214 (365)
T ss_pred             CcEecC--cccccC------CCeEEEECCccc----cCcccCHHHcC-----EEEEecccccCCCC--eEEEEEcH----
Confidence            999643  344442      379999999987    33444444443     23458899999888  78888865    


Q ss_pred             CChHHHHHHHHh-------------hccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936          266 FRKPKVVERMKK-------------YFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISC  331 (415)
Q Consensus       266 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~  331 (415)
                          +++++...             ......+++....+++..+|+...++ .++.+.++.+++.+++.+.|++.+|+..
T Consensus       215 ----~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~  290 (365)
T PLN02452        215 ----DLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYV  290 (365)
T ss_pred             ----HHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence                23222111             11123577777888888887754443 5889999999999999999998767621


Q ss_pred             C-CCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHH
Q 014936          332 P-HKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       332 ~-~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~  406 (415)
                      . ..+  .....+.+.++..     ....+|... ++++|+...+|....  +.+|+|+  +.+.++++.+++.++++-+
T Consensus       291 ~~~~~~~rs~~~vsF~~~~~-----~~~~~f~~~-~~~~g~~~~~G~r~~--gg~R~s~yna~~~~~v~~L~~~m~~f~~  362 (365)
T PLN02452        291 CPVEKSVRSLMNVPFTLGGS-----ELEAEFVKE-AAKAGMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFMKDFQA  362 (365)
T ss_pred             CCCChHHhCCeEEEEEcCCc-----hhHHHHHHH-HHHCCCcccCCcccc--CceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence            1 111  1333455555431     235555555 578899999887542  3499999  6799999999998888776


Q ss_pred             H
Q 014936          407 R  407 (415)
Q Consensus       407 ~  407 (415)
                      +
T Consensus       363 ~  363 (365)
T PLN02452        363 K  363 (365)
T ss_pred             h
Confidence            4

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.71  E-value=1.1e-14  Score=140.43  Aligned_cols=267  Identities=15%  Similarity=0.124  Sum_probs=172.8

Q ss_pred             HHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC----------C-CCCcEEEeCChHHHHHHHHHHhcC-------
Q 014936           61 VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK----------L-TPNDVFVTSGCTQAIDVAMALLSR-------  122 (415)
Q Consensus        61 ~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~----------~-~~~~i~i~~g~~~al~~~~~~l~~-------  122 (415)
                      +...++... ..+...+...++++.+.+|+.+..+..          . +...-++|+|||+++..++.+..+       
T Consensus       110 l~~~lN~n~-~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~  188 (522)
T TIGR03799       110 LMVALNQNL-VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADG  188 (522)
T ss_pred             HHHHhcCCc-ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccc
Confidence            444444432 344444567899999999998866310          1 112357899999998887766431       


Q ss_pred             -------------------CCCEEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcC----CCceE
Q 014936          123 -------------------PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLAD----QNTVA  176 (415)
Q Consensus       123 -------------------~gd~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~  176 (415)
                                         ++..|++++-.|+++...+...|+   +++.+|++.  ++.+|+++|++.++    .+++.
T Consensus       189 ~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~  266 (522)
T TIGR03799       189 DFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKP  266 (522)
T ss_pred             cccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCc
Confidence                               134689999999999999998888   688888853  45799999999885    34444


Q ss_pred             EEec--CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccCCCCce
Q 014936          177 LVII--NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       177 v~i~--~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      +.++  ..++.||.+   +++++|+++|+++|+++++|.+|++...-.... ..+..+...  ..+..+.+|++ .....
T Consensus       267 ~~vvataGtt~tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~a--DSit~d~HK~l-~~P~g  340 (522)
T TIGR03799       267 LAIVGVAGTTETGNI---DPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERA--DSVTIDAHKQL-YVPMG  340 (522)
T ss_pred             EEEEEEecCcCCCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhC--CEEEEChhhcC-CcCcc
Confidence            4443  556789999   778999999999999999999998754221111 112222111  15566899963 33344


Q ss_pred             EEEEEeeCCCCCCChHHHHHHHHhh---c-----------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936          254 LGWFVTTDPCGMFRKPKVVERMKKY---F-----------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       254 ~G~~~~~~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  319 (415)
                      +|.++.+++.       +.+.+...   .           ...++.+..+ ..+...|+......+++..++..++++++
T Consensus       341 ~G~llvr~~~-------~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l  412 (522)
T TIGR03799       341 AGMVLFKDPA-------LMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYF  412 (522)
T ss_pred             cEEEEEeCHH-------HHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            8998887632       33333221   0           0011112111 22334444444578899999999999999


Q ss_pred             HHHhhcCCCCcCCCCCCCceEEEEec
Q 014936          320 YNKIKEIPCISCPHKPEGSMAVMLKL  345 (415)
Q Consensus       320 ~~~l~~~~~~~~~~~p~~g~~~~~~l  345 (415)
                      .+.|++.|+++++..|.-+. +.+++
T Consensus       413 ~~~L~~~~~~el~~~p~l~i-v~Fr~  437 (522)
T TIGR03799       413 ADLIQQQPDFELVTEPELCL-LTYRY  437 (522)
T ss_pred             HHHHhhCCCeEEecCCCccE-EEEEE
Confidence            99999999999664454443 33443

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.71  E-value=1.6e-14  Score=137.72  Aligned_cols=343  Identities=13%  Similarity=0.120  Sum_probs=190.1

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHH--HHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVAT--EAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~--~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      +|+.++|+..|.-....+ -.+|.+.  +++.+++....+..... ....+. ...+++.+.+..+ +-..+.++++++|
T Consensus        36 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~-~~~~~~v~f~~sG  112 (431)
T TIGR03251        36 DGRRYLDMFSFFASMALG-MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVA-MARFVDTFARVLG-DPALPHLFFIEGG  112 (431)
T ss_pred             CCCChhhcccChhhcCCC-CCChhhhHHHHHHHHHHHhhhcccccCCCCCHH-HHHHHHHHHHhcC-CCCcCEEEEeCCc
Confidence            478889997775322211 2468888  88888877532111111 111222 3334433332211 1134689999999


Q ss_pred             HHHHHHHHHHhcC--------C------CCEEEEcCCCCcchHHHHHhC-CCe-EE--Eeec-------cCCC--CC---
Q 014936          110 TQAIDVAMALLSR--------P------GANILLPRPGFPIYELSAAFR-HIE-VR--HFDL-------LPDK--GW---  159 (415)
Q Consensus       110 ~~al~~~~~~l~~--------~------gd~vi~~~p~y~~~~~~~~~~-g~~-~~--~~~~-------~~~~--~~---  159 (415)
                      ++|++.+++....        .      +.+|+....+|++....+... |.. ..  ..+.       .+..  .+   
T Consensus       113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  192 (431)
T TIGR03251       113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP  192 (431)
T ss_pred             HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccc
Confidence            9999999988631        1      367999999999876554332 211 00  0010       0000  00   


Q ss_pred             --C-------CChhHHHhhcC--CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936          160 --E-------VDLDDIESLAD--QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV  226 (415)
Q Consensus       160 --~-------~~~~~l~~~~~--~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  226 (415)
                        .       -+++.+++.+.  +...+.++..| +...|.+ .+.+.+++|.++|++||+++|+||++.++...|... 
T Consensus       193 ~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-  271 (431)
T TIGR03251       193 NLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAW-  271 (431)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHH-
Confidence              0       12344444553  23344555666 5556765 688999999999999999999999999876654321 


Q ss_pred             cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH-HHh--hccccCCchhHHHHHHHHhhCCCcH-
Q 014936          227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER-MKK--YFDILGDPATFIQAAVPSILQQPDE-  302 (415)
Q Consensus       227 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~a~~~~l~~~~~-  302 (415)
                      ....++..+.++   +++|.+  +.  .|++....   +.   ++... +..  ....+.+.++++..++.+.|+...+ 
T Consensus       272 a~~~~gv~PDi~---~~gK~~--~~--~g~~~~~~---i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~  338 (431)
T TIGR03251       272 AYQQLGVQPDIV---AFGKKT--QV--CGIMAGRR---VD---EVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEE  338 (431)
T ss_pred             HHHhcCCCCCEE---EecccC--cc--ceEEecch---HH---HhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence            112223222333   468984  22  25554321   00   11111 110  1223456788888888888765322 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCe
Q 014936          303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNW  382 (415)
Q Consensus       303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~  382 (415)
                      ...++..+.-+..++.+.+..++.+++... ....|.++.+.++..     .....+...+ .++||.+.|..    ...
T Consensus       339 ~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~-vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gvl~~~~g----~~~  407 (431)
T TIGR03251       339 RLVDNARVQGAHLLARLHELAAEFPHLVSN-PRGRGLMCAFDLPST-----ADRDEVIRQL-YREGVLLLGCG----ERS  407 (431)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCccceec-ccccceeEEEEeCCH-----HHHHHHHHHH-HhCCeEEecCC----CCe
Confidence            223344444444444444433345423212 234467777777531     1123455555 56799998753    256


Q ss_pred             EEEEe--eCChhhHHHHHHHHHH
Q 014936          383 LRVTF--AVDPYSLEECLDRIKS  403 (415)
Q Consensus       383 iRi~~--~~~~~~l~~~l~~l~~  403 (415)
                      +|+++  .++++++++++++|.+
T Consensus       408 lr~~P~l~~t~~eid~~l~~l~~  430 (431)
T TIGR03251       408 IRFRPPLTVTREEIDAAIDAIRR  430 (431)
T ss_pred             EEEECCccCCHHHHHHHHHHHHh
Confidence            89887  4789999999999875

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.70  E-value=2.8e-14  Score=135.29  Aligned_cols=314  Identities=16%  Similarity=0.118  Sum_probs=183.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC-----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA  125 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd  125 (415)
                      .+.++.+++++.+.+.......|.-     ..-+..+++.++++++        .+..++++++++|+.+++.+ +.+||
T Consensus        91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~-l~~Gd  161 (454)
T TIGR00474        91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNT-LAKGK  161 (454)
T ss_pred             CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHH-hCCcC
Confidence            3457899999988876422112211     1123688888998872        34466788888999988865 47899


Q ss_pred             EEEEcCCCCc---c---hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc--cc--CCCHHHH
Q 014936          126 NILLPRPGFP---I---YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC--GN--VYSYQHL  195 (415)
Q Consensus       126 ~vi~~~p~y~---~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt--G~--~~~~~~l  195 (415)
                      +|+++...|.   +   +....+..|++++.++.+.    ..++++++++++++|+++++++++|++  |.  .   .++
T Consensus       162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~---~dl  234 (454)
T TIGR00474       162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEE---VSI  234 (454)
T ss_pred             EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCC---CCH
Confidence            9999987642   1   2345677899998887532    247899999999999999999999985  53  4   468


Q ss_pred             HHHHHHHhhcCcEEEEccccCCcccC---CCCccc----ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          196 QKLAETANKLKTLVIADEVYGHLVFG---DKPFVP----MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       196 ~~i~~~~~~~~~~li~De~~~~~~~~---~~~~~~----~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                      ++|+++|+++|+++++|.+.+.+.-.   +-...+    ....+.+   ++++|.+|.++.|  ..|++++++       
T Consensus       235 ~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaD---iv~fSg~K~LgGp--~~G~i~g~~-------  302 (454)
T TIGR00474       235 AELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVD---LVTFSGDKLLGGP--QAGIIVGKK-------  302 (454)
T ss_pred             HHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCC---EEEecCccccCCC--eEEEEEECH-------
Confidence            88999999999999999864432100   000111    1122333   8888999997655  478888764       


Q ss_pred             HHHHHHHHhhcc-ccCCchhH----HHHHHHHhhCCCc-------HHHHHHHHHHHHHHHHHHHHHhhcC--CCCcCCCC
Q 014936          269 PKVVERMKKYFD-ILGDPATF----IQAAVPSILQQPD-------EVFFKKTLNLLKQSVDICYNKIKEI--PCISCPHK  334 (415)
Q Consensus       269 ~~~~~~~~~~~~-~~~~~~~~----~~~a~~~~l~~~~-------~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~  334 (415)
                       ++++.++.... ........    .+.++..++....       -.-+....++++++...+.+.|+..  +++.+-..
T Consensus       303 -~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~  381 (454)
T TIGR00474       303 -ELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIV  381 (454)
T ss_pred             -HHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEE
Confidence             45554433211 00111111    1222222222110       0122334456666777777777653  33221111


Q ss_pred             C-----CCc------e-EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHH
Q 014936          335 P-----EGS------M-AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRI  401 (415)
Q Consensus       335 p-----~~g------~-~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l  401 (415)
                      +     .+|      + -+-+.+...   + .+..++.. .|++....+..-   -.++.+.+.+ +..++|++..+++|
T Consensus       382 ~~~~~~ggg~~p~~~l~~~~v~~~~~---~-~~~~~l~~-~lr~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       382 PGLSQVGGGSLPDERLPSYAVTLTPD---G-LSAEKLEA-RLRELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL  453 (454)
T ss_pred             EcCCcccCCCCcCCCCCeEEEEEecC---C-CCHHHHHH-HHhcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence            1     111      1 111222211   1 13455544 446655333321   1257788888 56778888777765

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.70  E-value=2.4e-14  Score=132.46  Aligned_cols=313  Identities=15%  Similarity=0.092  Sum_probs=194.4

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCc
Q 014936           57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFP  135 (415)
Q Consensus        57 ~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~  135 (415)
                      .++++++.+-...+  +.  +...++-+.+.+.+.+.++.+.+.+-+++++|||.++++++..++ ++|++|++.. .|+
T Consensus        19 ~~~~~~~~~~~~~H--Rs--~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG   93 (374)
T TIGR01365        19 SIEELKNAPLGRSH--RS--KLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG   93 (374)
T ss_pred             hHHHHhhhhcccCc--CC--HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence            66667665433221  12  233455555555555545532223346779999999999999998 5888888865 444


Q ss_pred             c-hH-HHHHhCCC-eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936          136 I-YE-LSAAFRHI-EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (415)
Q Consensus       136 ~-~~-~~~~~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  212 (415)
                      . +. +.++..|+ ++..+...  .+..+++++++.  +   +.|.+++....||+..|.   ++++..+  ++.++|+|
T Consensus        94 ~r~~~eia~~~g~~~v~~l~~~--~g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVD  161 (374)
T TIGR01365        94 KGWVTDVTKQLKLPDVRVLEAE--YGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICD  161 (374)
T ss_pred             HHHHHHHHHhcCCCCcEEEcCC--CCCCCCHHHcCC--C---CCEEEecCCCchheeccc---ccccccc--CCCcEEEE
Confidence            3 24 77888999 47777542  444688988873  1   236788888899999775   3444322  48999999


Q ss_pred             cccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHh--------------
Q 014936          213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKK--------------  277 (415)
Q Consensus       213 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------------  277 (415)
                      .+-+.+.    .+..+..+     .+++.|..|.+++ ||  +++++.+++        .+++.+.              
T Consensus       162 avSs~g~----~~l~~d~i-----Dv~~tgsQK~L~~ppG--ls~v~vs~~--------Al~~~~~~~~y~~~~~~~~~~  222 (374)
T TIGR01365       162 ATSAAFA----QDLDYHKL-----DVVTFSWQKVLGGEGA--HGMLILSPR--------AVARLESYTPAWPLPKIFRLT  222 (374)
T ss_pred             ccchhcC----CCCChhHC-----cEEEEechhccCCCCc--eEEEEECHH--------HHHHHhhcCCCCCChhhhccc
Confidence            9998733    22333322     2677788999876 45  666666542        2222110              


Q ss_pred             ---------h-ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC-CC-Cce-EEEE
Q 014936          278 ---------Y-FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHK-PE-GSM-AVML  343 (415)
Q Consensus       278 ---------~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~-~g~-~~~~  343 (415)
                               . ..+..+++.....++..+|+...++ .++.+.++++++.+.+++.++.++.+..+.. +. .+. ...+
T Consensus       223 ~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v  302 (374)
T TIGR01365       223 KGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCL  302 (374)
T ss_pred             cccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEE
Confidence                     0 1122345555556666666432233 5899999999999999999999843553311 11 122 2333


Q ss_pred             ecCccccCCCC-C-----HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHHH
Q 014936          344 KLNLSLLDDII-D-----DIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       344 ~l~~~~~~~~~-~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~~  406 (415)
                      .++.+...... +     ..+ +...++++||.+.+|..-.....|||+. + .+.++++.+++.|.-+.+
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~  372 (374)
T TIGR01365       303 KVVDPAIDALDEDAQADFAKE-LISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA  372 (374)
T ss_pred             EeCCccccccccchhhHHHHH-HHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence            44332110000 1     244 4445567799998887654468899999 3 789999999999986654

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.70  E-value=8.3e-14  Score=140.09  Aligned_cols=306  Identities=13%  Similarity=0.084  Sum_probs=195.7

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCCeE
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHIEV  148 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~~~  148 (415)
                      .|..++...+.+|+.+..|.+   ..-+..++|+++-.+.+.++..        .-++|+++...|+.....++..|+++
T Consensus       526 qG~lq~i~elq~~l~eltGmd---~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~V  602 (939)
T TIGR00461       526 EGYQELIAQLEKWLCSITGFD---AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQV  602 (939)
T ss_pred             HHHHHHHHHHHHHHHHHHCCC---CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEE
Confidence            455667777777776655543   2334445555554443433321        12579999999988888899999999


Q ss_pred             EEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHH-HHHHHHHHhhcCcEEEEccccCCcccCCCC
Q 014936          149 RHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKP  224 (415)
Q Consensus       149 ~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~  224 (415)
                      +.++.+.  ++.+|+++|++.+++   ++++|++++|+| +|.+   ++ +++|+++|+++|.++++|.++......   
T Consensus       603 v~V~~d~--~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDgAq~~al~~---  673 (939)
T TIGR00461       603 VPVNCDQ--DGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDGANMNAQVG---  673 (939)
T ss_pred             EEeccCC--CCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEecChhhCCC---
Confidence            9998753  456999999999974   788999999999 7888   55 999999999999999999999652211   


Q ss_pred             cccccccCCCCCeEEEccCccccC----CCCceEEEEEeeCCCCCCChHHHHHHHH---------------hhccc-c-C
Q 014936          225 FVPMGVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTTDPCGMFRKPKVVERMK---------------KYFDI-L-G  283 (415)
Q Consensus       225 ~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~~~---------------~~~~~-~-~  283 (415)
                      ......++.+   ++.+|.+|+|+    .+|.-+|.+.+++.        +...+-               ..... + .
T Consensus       674 l~~Pg~~GaD---i~~~s~HKtf~~P~G~GGPg~G~i~vr~~--------L~~~lPg~~v~~t~d~~greq~Iga~s~~~  742 (939)
T TIGR00461       674 LTSPGDLGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKSH--------LIPFLPKHDVVSMITGIGGSKSIGSVSAAP  742 (939)
T ss_pred             CCCccccCCC---EEEecCCccCCCCCCCCCCCeEEEEEhhh--------chhhcCCCcccccccCCCCccccccccccc
Confidence            1122334444   88889999765    24566899988642        111110               00000 1 1


Q ss_pred             CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-Cce---EEEEecCccccCCCCCHHHH
Q 014936          284 DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-GSM---AVMLKLNLSLLDDIIDDIDF  359 (415)
Q Consensus       284 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-~g~---~~~~~l~~~~~~~~~~~~~~  359 (415)
                      ..+......+..+|.....+.+.+..+..-.+.+++.+.|++.  ++ +..+. .+.   -+.++++..+-....+..++
T Consensus       743 ~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~-~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dI  819 (939)
T TIGR00461       743 YGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YP-ILFVGTLKHVAHECILDLRPLKAKTGIEAIDV  819 (939)
T ss_pred             cCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--Cc-ccccCCCCceeEEEEEeccchhhhcCCCHHHH
Confidence            2222233444444554456788898898999999999999874  34 22332 222   13344542111111246777


Q ss_pred             HHHHHhhcCeEEEcCCCCCCCCeE--EEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936          360 CFKLAKEESVIILPGTAVGLKNWL--RVTFAVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       360 ~~~ll~~~gi~v~~g~~~~~~~~i--Ri~~~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      .++|+ ++|+..-. ..|...+.+  +.+-+.++++||.+++.+.++.++..+
T Consensus       820 akrL~-d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~  870 (939)
T TIGR00461       820 AKRLQ-DYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA  870 (939)
T ss_pred             HHHHH-hCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence            77764 56997432 223344544  444467899999999999888777654

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.70  E-value=4.9e-16  Score=143.45  Aligned_cols=235  Identities=17%  Similarity=0.171  Sum_probs=147.4

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD  156 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~  156 (415)
                      .-+.+.++.+|+.++       ..+..++++|+|.++.+++.+++++||+|+++..||-+....+...|+.+++++.. .
T Consensus        66 G~I~eAe~~aA~~fG-------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~  137 (417)
T PF01276_consen   66 GIIKEAEELAARAFG-------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-D  137 (417)
T ss_dssp             THHHHHHHHHHHHHT-------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E
T ss_pred             cHHHHHHHHHHHhcC-------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-c
Confidence            346677888888873       45677899999999999999999999999999999999999999999999988754 2


Q ss_pred             CCC----CCCh-----hHHHhhcCC--CceE---EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cC
Q 014936          157 KGW----EVDL-----DDIESLADQ--NTVA---LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FG  221 (415)
Q Consensus       157 ~~~----~~~~-----~~l~~~~~~--~~~~---v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~  221 (415)
                      +.+    .+++     +.+++++++  ..++   +++++|+. -|++   .++++|+++|+++++.|++||||+... |.
T Consensus       138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGah~~F~  213 (417)
T PF01276_consen  138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVC---YDIKEIAEICHKHGIPLLVDEAHGAHFGFH  213 (417)
T ss_dssp             -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEE---E-HHHHHHHHCCTECEEEEE-TT-TTGGCS
T ss_pred             cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEE---ECHHHHHHHhcccCCEEEEEccccccccCC
Confidence            322    3455     888888764  2344   89999975 6788   578999999999999999999996544 44


Q ss_pred             CCCcccccccCC----CCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHH
Q 014936          222 DKPFVPMGVFGS----TVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVP  294 (415)
Q Consensus       222 ~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~  294 (415)
                       ..+.+...++.    +..++++.|.+|.  ++++. .+++..++... .    -.++++...  ..+.+++.+.++.+.
T Consensus       214 -~lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~~~~~~-v----~~~~~~~~l~~~~TTSPSY~lmASlD  285 (417)
T PF01276_consen  214 -PLPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHVKGDRI-V----DHERVNEALSMHQTTSPSYPLMASLD  285 (417)
T ss_dssp             -GGGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEEETCCC-T----THHHHHHHHHHHS-SS--HHHHHHHH
T ss_pred             -CCccchhhccCccccccceeeeechhhc--ccccccceEEEecCCCc-c----cHHHHHHHHHHHcCCChHHHHHHHHH
Confidence             22222222222    2347999999999  44544 56666665321 2    123333332  123455555444444


Q ss_pred             HhhCCCcHHHHHHHHHHHHHHHHHHHHHh---hcCCCCcC
Q 014936          295 SILQQPDEVFFKKTLNLLKQSVDICYNKI---KEIPCISC  331 (415)
Q Consensus       295 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~~  331 (415)
                      .+........-++..++..++.+.+++.|   ++++++.+
T Consensus       286 ~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~  325 (417)
T PF01276_consen  286 VARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKV  325 (417)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEE
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEec
Confidence            33322112333445555555555666666   55555553

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK15029 arginine decarboxylase; Provisional

Probab=99.70  E-value=1.7e-14  Score=142.88  Aligned_cols=231  Identities=10%  Similarity=0.032  Sum_probs=146.5

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD  156 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~  156 (415)
                      .-+.+..+..|+.++       .....++++|+|.++.+++.+++++||+|+++..||-+...++...|+.++++.-.. 
T Consensus       205 G~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~-  276 (755)
T PRK15029        205 GAFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR-  276 (755)
T ss_pred             cHHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-
Confidence            335666777777663       456789999999999999999999999999999999999999999999999886322 


Q ss_pred             CCC----CCC-----hhHHHhhcCCC--ce--------EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC
Q 014936          157 KGW----EVD-----LDDIESLADQN--TV--------ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH  217 (415)
Q Consensus       157 ~~~----~~~-----~~~l~~~~~~~--~~--------~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~  217 (415)
                      +.+    .++     ++.++++++..  .+        ++++++|+. -|++   .++++|+++|+++++++++||||+.
T Consensus       277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGa  352 (755)
T PRK15029        277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVC---YNAKEAQDLLEKTSDRLHFDEAWYG  352 (755)
T ss_pred             cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-ccee---eCHHHHHHHHHhcCCeEEEECcccc
Confidence            222    233     88888887432  23        899999975 6888   4678889999999999999999965


Q ss_pred             cc-cCCCCccccccc-----C-CCCCeEEEccCccccCCCCceEE-EEEeeCCCCCCChHHHHHHHHhhcc--ccCCchh
Q 014936          218 LV-FGDKPFVPMGVF-----G-STVPILTLGSLSKRWIVPGWRLG-WFVTTDPCGMFRKPKVVERMKKYFD--ILGDPAT  287 (415)
Q Consensus       218 ~~-~~~~~~~~~~~~-----~-~~~~~i~~~s~sK~~~~~G~r~G-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  287 (415)
                      .. |... .+....+     . ....++++.|.+|.  ++++..| ++...+......    .++++....  .+.+++.
T Consensus       353 h~~F~~~-~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LHv~~~~~~id----~~r~~~~l~~~qSTSPSY  425 (755)
T PRK15029        353 YARFNPI-YADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAIN----FSRFNQAYMMHATTSPLY  425 (755)
T ss_pred             ccccCcc-ccccccccccccccCCCceEEEEchhhc--ccchhhhhhheeCCCccccC----HHHHHHHHHHHcCCCcHH
Confidence            43 4432 1111112     1 11235889999999  5555544 455533211121    134444322  1344454


Q ss_pred             HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          288 FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      +.++.+..+........-++..+...+....+++.+.++
T Consensus       426 ~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~  464 (755)
T PRK15029        426 AICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL  464 (755)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence            444333332211100123334444455555555555544

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.69  E-value=9.6e-15  Score=129.81  Aligned_cols=347  Identities=18%  Similarity=0.138  Sum_probs=215.1

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+++.++|+..+......+ ...|++.+++.+....-  ..+.|...+ .-++.+.+.+.+.+     -..+.|++.++|
T Consensus        53 ~~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsG  125 (433)
T KOG1401|consen   53 PDGKEYIDFTSSWAVTILG-HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSG  125 (433)
T ss_pred             CCcceeeeeccceeccccC-CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCC
Confidence            3588999998886433332 34799999998887652  233333322 35566666655532     277899999999


Q ss_pred             HHHHHHHHHHhcCC------C--CEEEEcCCCCcchHHHHHh-CCCeEEEeeccC---C--CCCCCChhHHHhhcCCCc-
Q 014936          110 TQAIDVAMALLSRP------G--ANILLPRPGFPIYELSAAF-RHIEVRHFDLLP---D--KGWEVDLDDIESLADQNT-  174 (415)
Q Consensus       110 ~~al~~~~~~l~~~------g--d~vi~~~p~y~~~~~~~~~-~g~~~~~~~~~~---~--~~~~~~~~~l~~~~~~~~-  174 (415)
                      |+|++.++....+.      -  ..+|....+|++-...+.. .+......+.+|   +  ..---|.+.+++.++.+. 
T Consensus       126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~  205 (433)
T KOG1401|consen  126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG  205 (433)
T ss_pred             cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence            99999999886421      1  2489999999875444322 122111121111   1  001126889999887655 


Q ss_pred             -eEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936          175 -VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (415)
Q Consensus       175 -~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  251 (415)
                       .+.+|+.| +...|.+ .+++.+..|...|+++++++|.||++-++...|..-. ...+...   --|.++.|. ...|
T Consensus       206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a-~e~~~~~---PDI~t~aK~-L~gG  280 (433)
T KOG1401|consen  206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWA-QEYFGVT---PDITTVAKP-LGGG  280 (433)
T ss_pred             ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHH-HHHhCcC---Ccceeehhh-ccCC
Confidence             45577777 6667776 6888999999999999999999999998776654321 1122222   124467898 5677


Q ss_pred             ceEEEEEeeCCCCCCChHHHHHHHHhhc----cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          252 WRLGWFVTTDPCGMFRKPKVVERMKKYF----DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      +++|..++++        ++.+.+..-.    ..++..++++..++...|+... .+++++..+.-+..++.+.+.+.+.
T Consensus       281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~  352 (433)
T KOG1401|consen  281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKT  352 (433)
T ss_pred             ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            9999999976        6777775442    2456789999999988887644 4777777788888888888888775


Q ss_pred             CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHh-------hcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHH
Q 014936          327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAK-------EESVIILPGTAVGLKNWLRVTFAVDPYSLEECLD  399 (415)
Q Consensus       327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~-------~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~  399 (415)
                      +...+- ....++++-+.+..+... ..+.......+..       +.|+.+.|-.        -+++.+++|.++.+++
T Consensus       353 ~~~i~g-~~grgl~ig~~~~~p~~~-~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~--------~l~~~~~~E~i~~~l~  422 (433)
T KOG1401|consen  353 PNSICG-GVGRGLVIGFEFEGPVYK-FADAAREQGLLILTLGKGLLEEGVRIAPIY--------LLTVEHTPEVIQRLLT  422 (433)
T ss_pred             CCceee-eeeeEEEEEEEEeechhh-hhhhhhhhhHHHHHHhcccccceEEEeccc--------cccccCcHHHHHHHHH
Confidence            433211 234455554444321111 0111111111111       1133333300        1122345788888888


Q ss_pred             HHHHHHHHH
Q 014936          400 RIKSFYQRH  408 (415)
Q Consensus       400 ~l~~~~~~~  408 (415)
                      .+.+.+.++
T Consensus       423 i~~~~l~~~  431 (433)
T KOG1401|consen  423 ILEKVLSAL  431 (433)
T ss_pred             HHHHHHHHh
Confidence            888777654

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.69  E-value=1.1e-14  Score=138.46  Aligned_cols=340  Identities=14%  Similarity=0.083  Sum_probs=192.3

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHH-HhcCC--CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEA-LLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~-~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .+|+.++|+..|...... --.+|.+.++++++ .....  ...+... ...++.+.+++.+....  +...+.++++++
T Consensus        55 ~dG~~ylD~~sg~~~~~l-Gh~~p~i~~Ai~~q~~~~~l~~~~~~~~~-~~~~la~~l~~~l~~~~--p~~~~~v~f~~S  130 (464)
T TIGR00699        55 VDGNRLLDLYSQISSIPI-GYNNPALLKAAQSPEMATTLINRPALGNF-PSKDWAKILKEGILKVA--PKGQDQVWTGMS  130 (464)
T ss_pred             CCCCEEEEccCCHhhhcC-CCCCHHHHHHHHHHHHHHhhcccccCCcH-HHHHHHHHHHHhHHhhC--CCCcCEEEEeCC
Confidence            357889999888633221 12579999999874 22211  1122221 12334444443222211  112368999999


Q ss_pred             hHHHHHHHHHHhcC--------------------------CC---CEEEEcCCCCcchHHHHHhC-CCe-----------
Q 014936          109 CTQAIDVAMALLSR--------------------------PG---ANILLPRPGFPIYELSAAFR-HIE-----------  147 (415)
Q Consensus       109 ~~~al~~~~~~l~~--------------------------~g---d~vi~~~p~y~~~~~~~~~~-g~~-----------  147 (415)
                      |++|++.+++....                          +|   .+|+....+|++....+... +..           
T Consensus       131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~  210 (464)
T TIGR00699       131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD  210 (464)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence            99999999998731                          11   27999999999876554432 111           


Q ss_pred             EEEeeccCC-CCC-----------CCChhHHHhhcCC--CceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEE
Q 014936          148 VRHFDLLPD-KGW-----------EVDLDDIESLADQ--NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIA  211 (415)
Q Consensus       148 ~~~~~~~~~-~~~-----------~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~  211 (415)
                      +..+|.... ..+           .-+++.+++.++.  ...+.++..| ....|.+. +.+.++++.++|++||+++|+
T Consensus       211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~  290 (464)
T TIGR00699       211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV  290 (464)
T ss_pred             ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence            011111100 000           0134556666642  2345566677 55567765 788999999999999999999


Q ss_pred             ccccCCcccCCCCcccccccCCC--CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh-hccccCCchhH
Q 014936          212 DEVYGHLVFGDKPFVPMGVFGST--VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-YFDILGDPATF  288 (415)
Q Consensus       212 De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  288 (415)
                      ||++.++...|... ....++..  ..+   .+++|.++..|    +++..+         ....... ....++..+++
T Consensus       291 DEV~tGfGrtG~~f-a~e~~gv~~~PDi---~t~gK~lg~gG----~~~~~~---------~~~~~~~~~~~~T~~gnp~  353 (464)
T TIGR00699       291 DEVQTGVGATGKFW-AHEHWNLDDPPDM---VTFSKKFQTAG----YFFHDP---------AFRPNKPYRQFNTWMGDPS  353 (464)
T ss_pred             eeeeeCCCCCcchh-HHHhcCCCCCCCE---EEehhhhccCC----ccccch---------hccCCCCcccccCCCCCHH
Confidence            99998876544321 11222211  222   36789964444    333321         1111111 12235677888


Q ss_pred             HHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh----cCC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHH
Q 014936          289 IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK----EIP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL  363 (415)
Q Consensus       289 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l  363 (415)
                      +..++.+.|+...+   ++..++.++.-+++.+.|+    ++| .+..+.....|+++-+.++..     .....+...+
T Consensus       354 ~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~-----~~~~~i~~~~  425 (464)
T TIGR00699       354 RALILREIIQEIKR---KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE-----AKRDKLLKKA  425 (464)
T ss_pred             HHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH-----HHHHHHHHHH
Confidence            88888877754321   1233444444444444444    344 222121114577777776421     0133455554


Q ss_pred             HhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936          364 AKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       364 l~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~  405 (415)
                       .++||.+.+..    .+.|||..  ..++++++.++++|.+++
T Consensus       426 -~~~Gvl~~~~g----~~~ir~~Ppl~it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       426 -RNNGVNIGGCG----VKAIRLRPMLVFQKHHADIFLEIISKII  464 (464)
T ss_pred             -HHCCcEEecCC----CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence             56799997641    36899998  478999999999998753

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.67  E-value=9.7e-14  Score=138.72  Aligned_cols=311  Identities=14%  Similarity=0.112  Sum_probs=196.5

Q ss_pred             CCCCC---CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC-ChHHHHHHHHHHhc----C---C-CCEEEEcCCCCcchH
Q 014936           71 NGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS-GCTQAIDVAMALLS----R---P-GANILLPRPGFPIYE  138 (415)
Q Consensus        71 ~~y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~-g~~~al~~~~~~l~----~---~-gd~vi~~~p~y~~~~  138 (415)
                      +.|.+   ..|+.++...+.+++.+..|.    +.+-+.+ +|+.+..+++.++.    .   + .++|+++.-.|+...
T Consensus       530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp  605 (954)
T PRK12566        530 HPFAPREQAEGYRAMIDELEAWLCAITGF----DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP  605 (954)
T ss_pred             CCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence            45555   577777777777777665553    3334444 45555545555533    1   2 257889998887766


Q ss_pred             HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcccc
Q 014936          139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY  215 (415)
Q Consensus       139 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~  215 (415)
                      ..+...|++++.++.++  +..+|+++|++.++   +++.+|.+++|++-++..   +++++|+++|+++|+.+++|.++
T Consensus       606 asa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~  680 (954)
T PRK12566        606 ASAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN  680 (954)
T ss_pred             HHHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence            77888999999999864  34699999999987   577788888998755554   77999999999999999999999


Q ss_pred             CCcccCCCCcccccccCCCCCeEEEccCccccCCC----CceEEEEEeeCCCCCCChHHHHHHHHhh------------c
Q 014936          216 GHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWFVTTDPCGMFRKPKVVERMKKY------------F  279 (415)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~~------------~  279 (415)
                      .....   .......++.+   ++.++++|+|+.|    |.-+|.+.+.+        .+...+...            .
T Consensus       681 ~~a~~---~l~~Pg~~GAD---i~~~s~HKtf~~P~G~GGP~vG~iav~~--------~L~pfLp~~P~~d~~G~~~r~g  746 (954)
T PRK12566        681 LNAQV---GLARPADIGAD---VSHMNLHKTFCIPHGGGGPGMGPIGVRA--------HLAPFVANHPVVPVEGPDPNNG  746 (954)
T ss_pred             hhhcc---CCCChhhcCCC---EEEecCCcccCcCccCCCCccchhhhhh--------hhhhhccCCCCcCCCCCCCCCC
Confidence            64221   11122345554   8888999988532    44466655543        111111110            0


Q ss_pred             cc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce---EEEEecCccc-cCCC
Q 014936          280 DI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM---AVMLKLNLSL-LDDI  353 (415)
Q Consensus       280 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~---~~~~~l~~~~-~~~~  353 (415)
                      ..  ....+.....++..++.....+ +.+.......+.+++.+.|.+..++. + .+..+.   -+.+++...+ ..+ 
T Consensus       747 a~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~-~~~~~~~~hEfii~~~~l~~~~g-  822 (954)
T PRK12566        747 AVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-Y-RGRNERVAHECILDLRPLKAQTG-  822 (954)
T ss_pred             ceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-c-CCCCCCeeeEEEEEccccccccC-
Confidence            00  1122222234444455444445 66666666778899999997643444 3 332222   1222332111 111 


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      .+..++.++|+ ++||...- ..|...+++||+.  ..++++||.+++.|..+.++..+
T Consensus       823 ~~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~  879 (954)
T PRK12566        823 ISEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGK  879 (954)
T ss_pred             CCHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence            24567777776 78997543 3444478999999  57899999999999988887654

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.66  E-value=2.3e-16  Score=140.95  Aligned_cols=247  Identities=14%  Similarity=0.132  Sum_probs=160.9

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCC
Q 014936           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP  132 (415)
Q Consensus        53 ~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p  132 (415)
                      ++|++.+++.+.... +- .|+......++++.+++.+        ..+..+++++||.++.++++++++|++.|++..+
T Consensus         7 ~~~~m~~a~~~a~~g-d~-~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~   76 (290)
T PF01212_consen    7 PTPAMLEAMAAANVG-DD-AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT   76 (290)
T ss_dssp             S-HHEEHHHHHTTSB--C-CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred             CCHHHHHHHHccccC-Cc-ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence            578899999555443 33 6888778899999999998        4567779999999999999999999999999999


Q ss_pred             CCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCc-cccCCCHHHHHHHHHHH
Q 014936          133 GFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNP-CGNVYSYQHLQKLAETA  202 (415)
Q Consensus       133 ~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~np-tG~~~~~~~l~~i~~~~  202 (415)
                      +|....+   .....|.++..++..  ++..+++++|++.++.      +++.|.+.+|+|. .|+++|.+++++|.++|
T Consensus        77 aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a  154 (290)
T PF01212_consen   77 AHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA  154 (290)
T ss_dssp             EHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred             ceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence            8864332   335689999888753  2257999999988754      5788999999985 48999999999999999


Q ss_pred             hhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccc
Q 014936          203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDI  281 (415)
Q Consensus       203 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~  281 (415)
                      ++||+.+++|.+--+-...... .++..+...-.++ ..|++|.+++++   |.+++-++       ++++..... ...
T Consensus       155 ~~~gl~lhmDGARl~~a~~~~~-~~~~e~~~~~D~v-~~~~tK~~g~~~---Gavl~~~~-------~~i~~~~~~~k~~  222 (290)
T PF01212_consen  155 REHGLPLHMDGARLANAAAALG-VSLAEIAAGADSV-SFGGTKNGGAPG---GAVLAGNK-------EFIAKARRQRKRL  222 (290)
T ss_dssp             HHHT-EEEEEETTHHHHHCHHH-HHHHHHHTTSSEE-EEETTSTT-SSS---EEEEEESH-------HHHHHHHHHHHHH
T ss_pred             HhCceEEEEehhhHHHhhhccc-ccHHHHhhhCCEE-EEEEEccccccc---ceEEEech-------HHHHHHHHHHHHh
Confidence            9999999999986432211000 1122222222234 447899977766   66666442       443332222 221


Q ss_pred             cCCch---hHH-----HHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936          282 LGDPA---TFI-----QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC  328 (415)
Q Consensus       282 ~~~~~---~~~-----~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  328 (415)
                      .....   .+.     +.++...++.     ...+..+..++.+.+.+.|+.+++
T Consensus       223 gg~~~~~G~~~a~~~~~~~~l~~l~~-----~~~~~~~~~~~A~~La~~l~~~~~  272 (290)
T PF01212_consen  223 GGGMRQAGVLAAAELYQFAALRALEL-----WLERARHANAMAKRLAAGLEALGG  272 (290)
T ss_dssp             THHHHHTTHHHHHHHHHHHHHCHEEC-----SHHHHHCHHHHHHCHHHCHHEECE
T ss_pred             ccCeeecceeeeechhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHCCC
Confidence            11100   111     1133333443     244556666778888888888743

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.65  E-value=1.1e-13  Score=139.19  Aligned_cols=345  Identities=18%  Similarity=0.111  Sum_probs=206.8

Q ss_pred             ceeEecccCCCCCCCCC--CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           36 KVISLAMGDPTVHSCFH--TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~--~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +++|+..+.-..  +++  .+|++.+|+.+++..-.+.  .......+-...+|+.+.+..+ .-..++++++++|++|+
T Consensus       366 ~ylD~~sg~w~~--~lG~h~~p~I~~Ai~~Qa~rl~hv--~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAv  440 (817)
T PLN02974        366 QQFDACASWWTQ--GPDPTLQPELARAVAYAAGRYGHV--MFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAI  440 (817)
T ss_pred             eEEEcchhHHHh--CCCcCCCHHHHHHHHHHHhhCCcc--ccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHH
Confidence            677776663111  233  4899999999998753321  1111123445556666643111 00135899999999999


Q ss_pred             HHHHHHhcC-----C----------------CCEEEEcCCCCcchHHHHHhCCCe---------E------EEeecc---
Q 014936          114 DVAMALLSR-----P----------------GANILLPRPGFPIYELSAAFRHIE---------V------RHFDLL---  154 (415)
Q Consensus       114 ~~~~~~l~~-----~----------------gd~vi~~~p~y~~~~~~~~~~g~~---------~------~~~~~~---  154 (415)
                      +.+++...+     .                -.+||....+|++-...+...+..         .      ..++..   
T Consensus       441 E~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~  520 (817)
T PLN02974        441 EVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVG  520 (817)
T ss_pred             HHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccc
Confidence            999887621     1                236999999998755544333210         0      001000   


Q ss_pred             ----------CCC----------CCC-----CC------------hhHHHhhcC-------CCceEEEecCC--CCcccc
Q 014936          155 ----------PDK----------GWE-----VD------------LDDIESLAD-------QNTVALVIINP--GNPCGN  188 (415)
Q Consensus       155 ----------~~~----------~~~-----~~------------~~~l~~~~~-------~~~~~v~i~~p--~nptG~  188 (415)
                                +..          .|.     ++            .+.+++.++       ....+.+|..|  +...|+
T Consensus       521 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGm  600 (817)
T PLN02974        521 MRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGM  600 (817)
T ss_pred             cccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCc
Confidence                      000          000     00            134555553       23456778888  566787


Q ss_pred             C-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCC
Q 014936          189 V-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMF  266 (415)
Q Consensus       189 ~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~  266 (415)
                      + .+.+.++++.++|++||+++|.||++.++...|.... ...++..+.++   +++|.+ ..| +++|.+++++     
T Consensus       601 i~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa-~e~~gv~PDIi---~~gKgL-tgG~~Plaa~l~~~-----  670 (817)
T PLN02974        601 LLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESA-WELLGCKPDIA---CYAKLL-TGGLVPLAATLATE-----  670 (817)
T ss_pred             ccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhh-HHhcCCCCCEE---eecccc-cCCCCccEEEEEcH-----
Confidence            6 5788899999999999999999999999887765432 22233333334   568994 567 6999999976     


Q ss_pred             ChHHHHHHHHh------h-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHH----hhcCCCCcCCCC
Q 014936          267 RKPKVVERMKK------Y-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNK----IKEIPCISCPHK  334 (415)
Q Consensus       267 ~~~~~~~~~~~------~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~----l~~~~~~~~~~~  334 (415)
                         ++.+.+..      + ...+++.++++.+++.+.|+...+ +..++..+..++..+++.+.    +.++|.+.-  .
T Consensus       671 ---~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~--V  745 (817)
T PLN02974        671 ---EVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVER--V  745 (817)
T ss_pred             ---HHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeE--E
Confidence               67777642      1 234678899999999888765332 22333444444444444433    444554431  3


Q ss_pred             CCCceEEEEecCcccc-CCC--CCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLL-DDI--IDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~-~~~--~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~  405 (415)
                      ..-|.++-+.+..... .+.  .....+...++.++||.++|..     +.||+..  .+++++++++++.|.+.+
T Consensus       746 Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-----nvi~l~pP~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        746 VSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-----NVVYLMCGPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             EeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            3456777777743211 011  0123444444327899998842     5788765  468999999999988765

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.63  E-value=7.3e-13  Score=121.26  Aligned_cols=335  Identities=14%  Similarity=0.080  Sum_probs=201.7

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-----CCC-CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-----NGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .++|+.|-      ...+++|.+++++.+.+-..     ... .-..-..++-+.+.+.+++.++++-+-+-+++..|+|
T Consensus         5 ~~nF~aGP------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT   78 (364)
T PRK12462          5 QLNFSGGP------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSS   78 (364)
T ss_pred             cceecCCC------cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHH
Confidence            56888884      44578888888876643110     001 1112234455555555555555432333446666799


Q ss_pred             HHHHHHHHHhcCCCCEEE-EcCCCCcc--hHHHHHhCCCeEEEeeccCCCC--CCCChhHHHhhcCCCceEEEecCCCCc
Q 014936          111 QAIDVAMALLSRPGANIL-LPRPGFPI--YELSAAFRHIEVRHFDLLPDKG--WEVDLDDIESLADQNTVALVIINPGNP  185 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi-~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p~np  185 (415)
                      .++.++...++.+||+++ +...++.+  +.+.++.+| ++..+......+  ..++++.+  .++++.+.|.+++-...
T Consensus        79 ~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETs  155 (364)
T PRK12462         79 LQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETV  155 (364)
T ss_pred             HHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCC
Confidence            999999999999999654 44444433  445666676 544443211111  23455555  23345677778887789


Q ss_pred             cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC-
Q 014936          186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG-  264 (415)
Q Consensus       186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~-  264 (415)
                      ||+.++        ++.+.++.++|+|.+...+.    .+..+..++     ++..+..|.++.||  ++.++.+++.. 
T Consensus       156 tGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~d-----vi~agsQKnlgP~G--ltvvivs~~al~  216 (364)
T PRK12462        156 EGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAYG-----MVYAHAQKNLGPAG--VTVAIIRRALLE  216 (364)
T ss_pred             ceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHcc-----EEEeeccccCCCCc--eEEEEECHHHHh
Confidence            999986        22223589999999988733    333444442     56667799999888  67777754210 


Q ss_pred             CC--ChHHHHHHHHh--hccccCCchhHHHHHHHHhhCCCcHH--HHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCC-
Q 014936          265 MF--RKPKVVERMKK--YFDILGDPATFIQAAVPSILQQPDEV--FFKKTLNLLKQSVDICYNKIKEIPCISCP-HKPE-  336 (415)
Q Consensus       265 ~~--~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~-  336 (415)
                      ..  .-|.+.+....  ......+++....+++...|+...++  .++.+.++.++..+.+++.+++++++... ..+. 
T Consensus       217 ~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~  296 (364)
T PRK12462        217 RVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAA  296 (364)
T ss_pred             hccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhh
Confidence            00  00112111111  11123467777778887777654445  78899999999999999999988655421 1221 


Q ss_pred             -CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          337 -GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       337 -~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                       .-.-+.++++..     ..+.+|+.. +++.|+.-.-|.  ...+.+|+|+  +.+.|.++.+++-++++-++
T Consensus       297 RS~mnv~f~~~~~-----~l~~~f~~~-a~~~gl~~lkGh--r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~  362 (364)
T PRK12462        297 RSTMNVAFRFRQP-----RLDTLFKEQ-STEAGFCGLSGH--RSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR  362 (364)
T ss_pred             cCcceEEEEcCCH-----HHHHHHHHH-HHHCCCccccCC--cccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence             223344455432     124555555 477898865554  3357799999  68888888888888777654

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.61  E-value=1.1e-13  Score=128.80  Aligned_cols=274  Identities=15%  Similarity=0.160  Sum_probs=174.2

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCChHHHHHHHHHHhcC-------
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR-------  122 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~i~~g~~~al~~~~~~l~~-------  122 (415)
                      .-+-+.+...++.. ...|...+...++++.+.+|+.+.+|.+..     ...-++|+|+|+++..++.+..+       
T Consensus        54 ~i~~~~l~~~~n~n-~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~  132 (373)
T PF00282_consen   54 SILADLLASALNQN-GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSK  132 (373)
T ss_dssp             HHHHHHHHHHHT-B-TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhccc-ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhh
Confidence            33444445555443 335554456789999999999998887621     24578999999999888766531       


Q ss_pred             -CC------CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---C--ce-EEEecCCCCccccC
Q 014936          123 -PG------ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---N--TV-ALVIINPGNPCGNV  189 (415)
Q Consensus       123 -~g------d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~--~~-~v~i~~p~nptG~~  189 (415)
                       .|      -.|++++-+|+++...+...|+.++.+++++  ++.+|+++|+++++.   +  +. .|+.+-++..+|.+
T Consensus       133 ~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~  210 (373)
T PF00282_consen  133 AKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI  210 (373)
T ss_dssp             HHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB
T ss_pred             hcccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc
Confidence             12      2577778899999999999999999999875  457999999988753   2  23 45566667889999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                         +++.+|+++|+++|+|+++|.+|++..+-...... ...+... .-|. .+++|. +.....+|+++.+++.     
T Consensus       211 ---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~a-dSit-~d~HK~-l~~P~~~~~~l~r~~~-----  279 (373)
T PF00282_consen  211 ---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERA-DSIT-IDPHKW-LGVPYGCGVLLVRDKS-----  279 (373)
T ss_dssp             ----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGE-SEEE-EETTTT-TS-SSS-EEEEESSGG-----
T ss_pred             ---cCHHHHhhhccccceeeeecccccccccccccccccccccccc-cccc-cchhhh-hcCCccceeEEeeccc-----
Confidence               99999999999999999999999984432111111 1112111 1243 478998 4566789999987743     


Q ss_pred             HHHHHHHHh-----------------hccccCCchh-HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936          269 PKVVERMKK-----------------YFDILGDPAT-FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS  330 (415)
Q Consensus       269 ~~~~~~~~~-----------------~~~~~~~~~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  330 (415)
                       .+...+..                 ....+...+. .....+...|+....+.++++.++..+.++++.+.|++.+.++
T Consensus       280 -~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~e  358 (373)
T PF00282_consen  280 -DLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFE  358 (373)
T ss_dssp             -GHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred             -chHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence             12221100                 0011112222 1222222334333457889999999999999999999998888


Q ss_pred             CCCCCCCceEEEEe
Q 014936          331 CPHKPEGSMAVMLK  344 (415)
Q Consensus       331 ~~~~p~~g~~~~~~  344 (415)
                      ++..|.-+ .+.++
T Consensus       359 l~~~~~~~-~vcFr  371 (373)
T PF00282_consen  359 LVNEPDLN-IVCFR  371 (373)
T ss_dssp             ESSTTSSS-EEEEE
T ss_pred             EEcCCCce-EEEEE
Confidence            55444444 44333

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.61  E-value=2.9e-13  Score=132.86  Aligned_cols=167  Identities=13%  Similarity=0.148  Sum_probs=118.6

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HHhCCCeEEEeeccCCC
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRHFDLLPDK  157 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-~~~~g~~~~~~~~~~~~  157 (415)
                      +.+..+..|+.++       ..+..++++|+|.++.+++.+++.+||.|+++..||-+.... +...|+.++++.... +
T Consensus       176 i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n  247 (720)
T PRK13578        176 AKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-N  247 (720)
T ss_pred             HHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-c
Confidence            5566677777663       346778999999999999999999999999999999998885 889999999886432 2


Q ss_pred             CC----CCCh-----hHHHhhcCCC----------ceEEEecCCCCccccCCCHHHHHHHHHH-HhhcCcEEEEccccCC
Q 014936          158 GW----EVDL-----DDIESLADQN----------TVALVIINPGNPCGNVYSYQHLQKLAET-ANKLKTLVIADEVYGH  217 (415)
Q Consensus       158 ~~----~~~~-----~~l~~~~~~~----------~~~v~i~~p~nptG~~~~~~~l~~i~~~-~~~~~~~li~De~~~~  217 (415)
                      .+    .++.     +.+++++++.          .+++++++|+. -|++++   +++|+++ ++.++ +|++||+|+.
T Consensus       248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhga  322 (720)
T PRK13578        248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVG  322 (720)
T ss_pred             ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchh
Confidence            22    2354     4477777543          47889999875 688855   5667776 56777 9999999976


Q ss_pred             cc-cCCC--Ccccc-cccCC-CCCeEEEccCccccCCCCceE-EEEEee
Q 014936          218 LV-FGDK--PFVPM-GVFGS-TVPILTLGSLSKRWIVPGWRL-GWFVTT  260 (415)
Q Consensus       218 ~~-~~~~--~~~~~-~~~~~-~~~~i~~~s~sK~~~~~G~r~-G~~~~~  260 (415)
                      .. |...  ...+. ...+. +..++++.|.+|.  ++++-. +++...
T Consensus       323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~LHvk  369 (720)
T PRK13578        323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQIHKK  369 (720)
T ss_pred             hhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhhhcC
Confidence            54 4431  11111 12233 3457999999999  455544 445553

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.57  E-value=3.2e-12  Score=130.99  Aligned_cols=271  Identities=14%  Similarity=0.090  Sum_probs=175.6

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CC--CCEEEEcCCCCcchHHH----HHhCCCeEEEe
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RP--GANILLPRPGFPIYELS----AAFRHIEVRHF  151 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~--gd~vi~~~p~y~~~~~~----~~~~g~~~~~~  151 (415)
                      +.++++.++++.      ++++.++-+..++|++.+.++.++. .+  +++|++++..|+.....    ++..|++++.+
T Consensus       123 l~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~  196 (954)
T PRK05367        123 LLNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVG  196 (954)
T ss_pred             HHHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEe
Confidence            445666777776      6788999999999999998887763 34  48999999999986654    46689999988


Q ss_pred             eccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936          152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF  231 (415)
Q Consensus       152 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  231 (415)
                      +...      +++      .+++..+++.+| |-+|.+   .++++|+++|+++|+++++|..+..+...    .+...+
T Consensus       197 ~~~~------d~~------~~~~~~vlvq~p-~~~G~i---~d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~  256 (954)
T PRK05367        197 DAAK------ALD------HDDVFGVLLQYP-GTSGEV---RDYTALIAAAHARGALVAVAADLLALTLL----TPPGEM  256 (954)
T ss_pred             cCcc------CCC------cccEEEEEEecC-CCCeee---ccHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhc
Confidence            7632      111      224445556666 459999   56999999999999999999866332211    123455


Q ss_pred             CCCCCeEEEccCccc-----cCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-------------------------ccc
Q 014936          232 GSTVPILTLGSLSKR-----WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------------------------FDI  281 (415)
Q Consensus       232 ~~~~~~i~~~s~sK~-----~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~  281 (415)
                      +.+   +++++..|+     ||.||  .|++.+++        ++.+.+.-.                         ..-
T Consensus       257 GaD---i~vgs~qkfg~P~g~GGP~--aGflavr~--------~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRre  323 (954)
T PRK05367        257 GAD---IAVGSAQRFGVPMGFGGPH--AAYFAVRD--------AYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRRE  323 (954)
T ss_pred             CCC---EEEeeCcccCCCCCCCCCC--EEEEEECH--------HHHhhCCCCeeeeecccCCCccccccccccccccccc
Confidence            555   888899997     55555  89988865        222222100                         000


Q ss_pred             cCCchhH---HHHHHHH--hhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCH
Q 014936          282 LGDPATF---IQAAVPS--ILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDD  356 (415)
Q Consensus       282 ~~~~~~~---~~~a~~~--~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~  356 (415)
                      ..+.|.-   ...++.+  ++..+....+++..++...+..++.+.|+.. |++.. .+.-...+.++++       .+.
T Consensus       324 kaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~-~~~~f~~~~~~~~-------~~~  394 (954)
T PRK05367        324 KATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVV-HDSFFDTLTVEVG-------GDA  394 (954)
T ss_pred             ccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccC-CCCCCCeEEEeCC-------CCH
Confidence            0111111   1111111  1222334678888899999999999999874 77732 2211112223332       145


Q ss_pred             HHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936          357 IDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK  402 (415)
Q Consensus       357 ~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~  402 (415)
                      .++.+++ .++||.+..-    ..+.+|+|+  .+++++|+.+++.|.
T Consensus       395 ~~i~~~l-~~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~~l~  437 (954)
T PRK05367        395 AAVLARA-LAAGINLRRV----DDDHVGISLDETTTREDLAALLAVFG  437 (954)
T ss_pred             HHHHHHH-HHCCceeccc----cCCEEEEEecccCCHHHHHHHHHHHc
Confidence            6666666 5669987322    146899999  468899999999997

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.57  E-value=3.4e-12  Score=117.36  Aligned_cols=341  Identities=16%  Similarity=0.134  Sum_probs=210.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.=+|||-+..-+    -.+.++.++++..    ++ -.|........|++.+++.+        ..+.++.|+.++.+-
T Consensus        40 ~dV~IDLrSDTgT----~apS~~m~aAM~~----GD-D~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRgaE  102 (467)
T TIGR02617        40 EDVFIDLLTDSGT----GAVTQSMQAAMMR----GD-EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAE  102 (467)
T ss_pred             CCeEEECccCCCC----CCCCHHHHHHHHc----CC-cccccCchHHHHHHHHHHHh--------CCceEEECCCCchHH
Confidence            3345777776522    1357778887775    23 25776677899999999998        456788999999999


Q ss_pred             HHHHHHhcC-CCCEEEEcCC-------CCcc-hHHHHHhCCCeEEEeecc--------CCCCCCCChhHHHhhcCCC---
Q 014936          114 DVAMALLSR-PGANILLPRP-------GFPI-YELSAAFRHIEVRHFDLL--------PDKGWEVDLDDIESLADQN---  173 (415)
Q Consensus       114 ~~~~~~l~~-~gd~vi~~~p-------~y~~-~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~---  173 (415)
                      .++++.+++ +|+.+++..+       .|+. ....+...|+.+..++.+        ......+|+++|++++++.   
T Consensus       103 ~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~  182 (467)
T TIGR02617       103 QIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN  182 (467)
T ss_pred             HHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence            999999988 7887776554       2222 234566778877665321        1223468999999998742   


Q ss_pred             -ceEEEecCCCC-ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-c---------cCCCCccccc-ccCCCCCeEEE
Q 014936          174 -TVALVIINPGN-PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-V---------FGDKPFVPMG-VFGSTVPILTL  240 (415)
Q Consensus       174 -~~~v~i~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~---------~~~~~~~~~~-~~~~~~~~i~~  240 (415)
                       ...+...-.+| -.|+++|.+.++++.++|++||+.++.|.+--+- .         +.+.....+. .+...-. .+.
T Consensus       183 ~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD-svt  261 (467)
T TIGR02617       183 NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD-MLA  261 (467)
T ss_pred             CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC-EEE
Confidence             11221111123 4689999999999999999999999999976441 1         2222222111 0011111 344


Q ss_pred             ccCccccCCC-CceEEEEEeeCCCCCCChHHHHHHHHhhc------cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHH
Q 014936          241 GSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYF------DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLL  312 (415)
Q Consensus       241 ~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~  312 (415)
                      .|+||.+++| |   |+++++++. +.   ++.++.+...      .+.++.+.-.+.|++.-|.+.. ++++..+..  
T Consensus       262 ~slsKglgApvG---g~Lag~d~~-~~---~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~--  332 (467)
T TIGR02617       262 MSAKKDAMVPMG---GLLCFKDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIN--  332 (467)
T ss_pred             EEcCCCCCCccc---ceEEecchh-HH---HHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHH--
Confidence            5899998766 3   555554421 11   3444444421      1234556566667766666532 355555544  


Q ss_pred             HHHHHHHHHHhhcCCCCcCCCCCCCceEEEEec----CccccCCCCCHHHHHHHHHhhcCeEE-EcCCCC-CC-------
Q 014936          313 KQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL----NLSLLDDIIDDIDFCFKLAKEESVII-LPGTAV-GL-------  379 (415)
Q Consensus       313 ~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l----~~~~~~~~~~~~~~~~~ll~~~gi~v-~~g~~~-~~-------  379 (415)
                        ..++|.+.|.+. |+.++ . .+|.-++++-    |.-+.... ....+..+|-.+.||-. .-|+.. +.       
T Consensus       333 --qv~yl~~~L~~~-Gvpi~-~-~Gghav~iDa~~~lphip~~~f-pa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~  406 (467)
T TIGR02617       333 --QVQYLVNGLEEI-GVVCQ-Q-AGGHAAFVDAGKLLPHIPADQF-PAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQ  406 (467)
T ss_pred             --HHHHHHHHHHhC-CCcEE-e-cCccEEEEehhhhCCCCChhhC-cHHHHHHHHHHHcCcceEeecceecccCCCCCcc
Confidence              445666666666 77743 5 7777776642    11111111 36677777777888863 334431 11       


Q ss_pred             ----CCeEEEEee---CChhhHHHHHHHHHHHHHH
Q 014936          380 ----KNWLRVTFA---VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       380 ----~~~iRi~~~---~~~~~l~~~l~~l~~~~~~  407 (415)
                          -.-+|+++.   .+.+.++...++|..+.++
T Consensus       407 ~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~  441 (467)
T TIGR02617       407 LPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_pred             CCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence                146999993   5889999999999988775

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.57  E-value=1.1e-12  Score=128.61  Aligned_cols=297  Identities=13%  Similarity=0.082  Sum_probs=175.4

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  158 (415)
                      +.+..+.+|+.++       .....++++|+|.++.+++.+++.+||.|+++..||-+...++...|+.++++.... +.
T Consensus       197 i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n~  268 (714)
T PRK15400        197 HKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-NA  268 (714)
T ss_pred             HHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cc
Confidence            4566777777663       345778999999999999999999999999999999999999999999999986432 22


Q ss_pred             C----CCC-----hhHHHhhcCCCc--e---EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCC
Q 014936          159 W----EVD-----LDDIESLADQNT--V---ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDK  223 (415)
Q Consensus       159 ~----~~~-----~~~l~~~~~~~~--~---~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~  223 (415)
                      +    .++     .+.+++++...+  +   .+++++|+ --|.+++   +++|++.|+.++  +++||||+... |...
T Consensus       269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~  342 (714)
T PRK15400        269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPI  342 (714)
T ss_pred             cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence            2    234     788888876432  2   68888885 4788865   566677777776  78999997654 4432


Q ss_pred             C--ccccccc-CCCCCeEEEccCccccCCCCceEEE-EEeeCCCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHH---
Q 014936          224 P--FVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGW-FVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVP---  294 (415)
Q Consensus       224 ~--~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~---  294 (415)
                      -  ..++... +.++.++++.|.+|.  ++|+.-+. +...+  . .+    .++++....  .+.+++.+..+.+.   
T Consensus       343 ~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~LHvkg--~-vd----~~~~n~a~~m~~STSPsY~l~ASLD~a~  413 (714)
T PRK15400        343 YEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMIHVKG--D-VN----EETFNEAYMMHTTTSPHYGIVASTETAA  413 (714)
T ss_pred             cCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHHHHcC--C-CC----HHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence            1  1222211 112456999999999  45554443 43322  1 11    133433322  12344444333222   


Q ss_pred             HhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC------CcCCCCCC-------------Cce----------E-----
Q 014936          295 SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC------ISCPHKPE-------------GSM----------A-----  340 (415)
Q Consensus       295 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~p~-------------~g~----------~-----  340 (415)
                      +.++.   ..-++..+...+....+++.|.++++      +.++ .|.             ..+          +     
T Consensus       414 ~~m~~---~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~-~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~  489 (714)
T PRK15400        414 AMMKG---NAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPI  489 (714)
T ss_pred             HHHHh---hhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEec-ChhhcccchhcccCccccccCcccccccccccCCc
Confidence            23331   12334444555555555666655544      3322 111             000          0     


Q ss_pred             -EEEecCcccc------CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          341 -VMLKLNLSLL------DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       341 -~~~~l~~~~~------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                       +.+..+.-..      .|. .+.. +...|+++||.+.-.+.+.  --+-++++.++++++.+++.|.++-+
T Consensus       490 Klti~tpgi~~~g~~~~~Gi-pg~~-v~~~L~e~gI~~E~~d~~~--iLfl~s~g~t~~~~~~L~~aL~~f~~  558 (714)
T PRK15400        490 KVTLLTPGMKKDGTMSDFGI-PASI-VAKYLDEHGIVVEKTGPYN--LLFLFSIGIDKTKALSLLRALTDFKR  558 (714)
T ss_pred             eEEEEeCCCCCCccccccCC-CHHH-HHHHHHHcCCEEEecCCCe--EEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence             1111111000      011 2334 4445588899987654311  12344446788999988888887644

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.55  E-value=9.1e-12  Score=122.37  Aligned_cols=165  Identities=15%  Similarity=0.082  Sum_probs=115.1

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  158 (415)
                      +.+..+.+|+.++       .....++++|+|.++.+++.+++.+||.|+++..||-+...++...|+.++++.... +.
T Consensus       197 i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~  268 (713)
T PRK15399        197 HLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NA  268 (713)
T ss_pred             HHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cc
Confidence            4566677777663       345778999999999999999999999999999999999999999999999986322 22


Q ss_pred             C----CCCh-----hHHHhhcCCC-----ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEE-EEccccCCcc-cCC
Q 014936          159 W----EVDL-----DDIESLADQN-----TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV-IADEVYGHLV-FGD  222 (415)
Q Consensus       159 ~----~~~~-----~~l~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~De~~~~~~-~~~  222 (415)
                      +    .++.     +.+++++++.     ++++++++|+ --|.+++.+   +|++.|   |+.+ ++||+|+... |..
T Consensus       269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~---~I~~~~---g~~~ilvDEAhgah~~F~p  341 (713)
T PRK15399        269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTD---WIKQTL---DVPSIHFDSAWVPYTHFHP  341 (713)
T ss_pred             cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHH---HHHHHh---CCCEEEEeccchhhhhcCc
Confidence            2    2344     8888877542     3578899985 478997654   455555   4555 6999997654 433


Q ss_pred             CC--ccccccc-CCCCCeEEEccCccccCCCCceE-EEEEee
Q 014936          223 KP--FVPMGVF-GSTVPILTLGSLSKRWIVPGWRL-GWFVTT  260 (415)
Q Consensus       223 ~~--~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~  260 (415)
                      .-  ..++... +.+..++++.|.+|.  ++|+.- +++..+
T Consensus       342 ~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iHvk  381 (713)
T PRK15399        342 IYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIHIK  381 (713)
T ss_pred             ccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeeeec
Confidence            11  1222221 223345678999999  455544 455553

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.54  E-value=1.8e-13  Score=126.42  Aligned_cols=283  Identities=19%  Similarity=0.199  Sum_probs=171.0

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++||..+.-...  ++ .+|.+.+++++++......  .......+....+++.+.+..+  -..++++++++++
T Consensus        13 ~dG~~~lD~~~~~~~~~--lGh~~p~i~~ai~~~~~~~~~~--~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGs   86 (339)
T PF00202_consen   13 VDGREYLDFMSGYGSVN--LGHNHPEIAEAIAEQANKLNYV--SFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGS   86 (339)
T ss_dssp             TTSEEEEESSHHHHTTT--T-BT-HHHHHHHHHHHHHCSSC--STTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHH
T ss_pred             CCCCEEEECCCCcccee--cCCCccccchhHHHHhhhcccc--cccceeccchhhhhhhhhhccc--cccceeeeccCch
Confidence            45889999987642211  22 4689999999988754321  1122334556666666665443  2457999999999


Q ss_pred             HHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCC-------------CeEEEeeccCCCCCCCChhH----
Q 014936          111 QAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRH-------------IEVRHFDLLPDKGWEVDLDD----  165 (415)
Q Consensus       111 ~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~----  165 (415)
                      +|++.+++...       .++ .+|+....+|++....+...+             ..+..+|.+       ++..    
T Consensus        87 eAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~  159 (339)
T PF00202_consen   87 EAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-------DPAADEEE  159 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-------CHHHHHHH
T ss_pred             HHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-------ccchhhhH
Confidence            99999999876       122 689999999987554333211             122334431       2222    


Q ss_pred             ------HHhh---cCCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936          166 ------IESL---ADQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (415)
Q Consensus       166 ------l~~~---~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  234 (415)
                            +++.   ......+.+|..| +...|.. ++.+.+++|.++|++||+++|.||++.++...|... ....++..
T Consensus       160 ~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~  238 (339)
T PF00202_consen  160 QACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVD  238 (339)
T ss_dssp             HHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSS
T ss_pred             HHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceeccccc
Confidence                  2222   2234456677777 4445554 678899999999999999999999999987666533 22333333


Q ss_pred             CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK  313 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  313 (415)
                      +.++   +++|.+ ..|+.+|.+++++        ++.+.+... ...++..++++..++.+.|+...++   +..++.+
T Consensus       239 PDiv---~~gK~l-~gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~---~~~~~~~  303 (339)
T PF00202_consen  239 PDIV---TFGKGL-GGGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEE---DLLERVR  303 (339)
T ss_dssp             SSEE---EEEGGG-GTTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHT---THHHHHH
T ss_pred             Cccc---ccccch-hhhhhcccccccc--------hhhccccccccccccccchHhhhhhhhHHHhhccH---HHHHHHH
Confidence            3344   457995 4569999999976        566655433 2345667889998888888653221   2334444


Q ss_pred             HHHHHHHHHhhc----CCCCcCCCCCCCceEEEEec
Q 014936          314 QSVDICYNKIKE----IPCISCPHKPEGSMAVMLKL  345 (415)
Q Consensus       314 ~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l  345 (415)
                      +.-+++.+.|++    .+.+. . ...-|+++-+++
T Consensus       304 ~~g~~l~~~L~~l~~~~~~i~-~-vrg~Gl~~~ie~  337 (339)
T PF00202_consen  304 ELGERLREGLRELAARYPLIG-E-VRGIGLMIGIEL  337 (339)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEE-E-EEEETTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCeE-E-EeeeCeEEEEEE
Confidence            444444444443    23332 1 334466665555

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.51  E-value=2e-11  Score=124.73  Aligned_cols=299  Identities=13%  Similarity=0.079  Sum_probs=185.7

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCC-----C----cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-
Q 014936           52 HTTHVATEAVAEALLSEKFNGYAPTA-----G----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-  121 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y~~~~-----g----~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-  121 (415)
                      ..++.+.+++.+...  .+..|+|..     |    +.+++..|++++      +++++++-++.++|++.++++.++. 
T Consensus       116 ~~P~~v~~~i~~~~~--~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~  187 (993)
T PLN02414        116 HVPPVILRNILENPG--WYTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNI  187 (993)
T ss_pred             cCCHHHHHHHHhChH--HHhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhc
Confidence            456666677766443  223444321     2    456777788887      6889999999999999998887763 


Q ss_pred             CC--CCEEEEcCCCCcchHHHH----HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936          122 RP--GANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (415)
Q Consensus       122 ~~--gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  195 (415)
                      .+  +++|++++..|+.+....    +..|++++.++....     +      ...+....+++..|+ .+|.+   .++
T Consensus       188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vlvq~P~-~~G~v---~dv  252 (993)
T PLN02414        188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVLVQYPA-TDGEV---LDY  252 (993)
T ss_pred             ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEEEecCC-CCeEE---cCH
Confidence            43  478999999999876544    456899888875321     1      111123344444444 49999   568


Q ss_pred             HHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc---CCCCceEEEEEeeCCCCCCChHHHH
Q 014936          196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW---IVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~---~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++|+++|+++|+++++ .++.....   ...+...++.+   +++++..|+.   +..|.+.|++.+++.        +.
T Consensus       253 ~~I~~~ah~~GaL~iV-aad~lal~---~l~~pge~GAD---i~vgsgqKwg~P~G~GGP~aGflavr~~--------~~  317 (993)
T PLN02414        253 AEFVKNAHANGVKVVM-ATDLLALT---MLKPPGEWGAD---IVVGSAQRFGVPMGYGGPHAAFLATSQE--------YK  317 (993)
T ss_pred             HHHHHHHHHcCCEEEE-EECHHHhc---CCCCHhhccCc---EEEECCCccccCCCCCCCCeeEEEECHH--------HH
Confidence            8999999999999999 55443111   11134455555   8889999984   124566999998652        21


Q ss_pred             HHHH-------------------------hhccccCCchhHHHHHHHHhh-----CCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936          273 ERMK-------------------------KYFDILGDPATFIQAAVPSIL-----QQPDEVFFKKTLNLLKQSVDICYNK  322 (415)
Q Consensus       273 ~~~~-------------------------~~~~~~~~~~~~~~~a~~~~l-----~~~~~~~~~~~~~~~~~~~~~l~~~  322 (415)
                      +.+-                         ..+.-.++.|.-+..++.+.+     ..+....+++..++..++..++.+.
T Consensus       318 r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~  397 (993)
T PLN02414        318 RLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAG  397 (993)
T ss_pred             hhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence            1110                         000001222322222222222     1222355788888899999999999


Q ss_pred             hhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHH
Q 014936          323 IKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDR  400 (415)
Q Consensus       323 l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~  400 (415)
                      |+.. |+++...|..+ .+.++++        +..++.+.+ .++||.+....    .+.+|+|+.  ++++||+.+++.
T Consensus       398 L~~~-G~~~~~~~~f~-~vt~~~~--------~~~~v~~~L-~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~  462 (993)
T PLN02414        398 LKKL-GFQVQSLPFFD-TVKVKCS--------DADAIADAA-AKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKV  462 (993)
T ss_pred             Hhhc-CCccCCCCCcC-eEEEecC--------CHHHHHHHH-HHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHH
Confidence            9876 67743222212 2333332        345666665 56799775432    467999994  689999999999


Q ss_pred             HHH
Q 014936          401 IKS  403 (415)
Q Consensus       401 l~~  403 (415)
                      |..
T Consensus       463 l~~  465 (993)
T PLN02414        463 FAG  465 (993)
T ss_pred             Hcc
Confidence            963

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.51  E-value=3.3e-13  Score=108.20  Aligned_cols=115  Identities=18%  Similarity=0.310  Sum_probs=89.9

Q ss_pred             hHHHHHHHhhh-cccccccCcceeEecccCCCC-------------CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 014936           16 TIKGMLSLLMQ-SVDDEKNEKKVISLAMGDPTV-------------HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (415)
Q Consensus        16 ~~~~~~~~~~~-~~~~~~~~~~~i~l~~g~~~~-------------~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~   81 (415)
                      +.-+.+..+.+ .+++..|+..+|+|+.+.+..             .+++.+++.+++++.+.      ..|++..|.++
T Consensus        23 ~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~   96 (153)
T PLN02994         23 PYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLAN   96 (153)
T ss_pred             hHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHH
Confidence            44455555555 367778999999999987521             12233344444444442      24888899999


Q ss_pred             HHHHHHHHHhhhCC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 014936           82 TRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI  136 (415)
Q Consensus        82 lr~~ia~~~~~~~~--~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~  136 (415)
                      ||+++|+|+++++|  ..+++++|++|+|+++++.+++.+++++||.|++++|+|+.
T Consensus        97 lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~  153 (153)
T PLN02994         97 FRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA  153 (153)
T ss_pred             HHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence            99999999999888  56889999999999999999999999999999999999974

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=99.45  E-value=5.2e-11  Score=107.98  Aligned_cols=314  Identities=14%  Similarity=0.101  Sum_probs=201.3

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc----C-CC---CEEEEcCCCCcchHHHHHhCCCeE
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS----R-PG---ANILLPRPGFPIYELSAAFRHIEV  148 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~----~-~g---d~vi~~~p~y~~~~~~~~~~g~~~  148 (415)
                      ++..++..++-+++...++.+ ....=..|+|+|+++.++.+...    . +|   ..++++...+.++...++.++.++
T Consensus       116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l  194 (491)
T KOG1383|consen  116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL  194 (491)
T ss_pred             chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence            456788888888888777755 22344678899999666655532    1 23   368888889999999999999999


Q ss_pred             EEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh-cCcEEEEccccCCcccC-CCCcc
Q 014936          149 RHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFG-DKPFV  226 (415)
Q Consensus       149 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~-~~~~~  226 (415)
                      ..+++++ +++.+|+..+.+.+++++..++..-|+.|+|.+   +++++|.++..+ +++.+++|.+-+.|... +....
T Consensus       195 ~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~  270 (491)
T KOG1383|consen  195 REVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE  270 (491)
T ss_pred             Eeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence            9999976 678999999999999999999999999999999   999999999999 99999999999998863 21111


Q ss_pred             cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC----hHHHHHHHHhhccccC---CchhHHHHHHHHhhCC
Q 014936          227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----KPKVVERMKKYFDILG---DPATFIQAAVPSILQQ  299 (415)
Q Consensus       227 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~  299 (415)
                      .-..+....-+=.-.+.+|. |+.--..||++-++...+..    +.+....+.......+   +.....|++.  ++ .
T Consensus       271 ~~fdFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~--~~-~  346 (491)
T KOG1383|consen  271 EEFDFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAA--LM-S  346 (491)
T ss_pred             cccccCCCCceeEeecccee-eeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHH--HH-H
Confidence            11112111111122244674 66444489998876542210    0000000111100111   1222333333  23 2


Q ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC
Q 014936          300 PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL  379 (415)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~  379 (415)
                      ..++.+.+..+.+.+....+.+.+++.+++.++..|.-++..   +....    -+.-+ +..+|++.|-.+..-..   
T Consensus       347 lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~---~~s~~----~~i~e-lsd~l~~~GW~lnalq~---  415 (491)
T KOG1383|consen  347 LGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFIL---FGSND----VNIFE-LSDLLRKKGWILNALQF---  415 (491)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEE---ccCCc----cchhh-hhHHHHhcCcCccccCC---
Confidence            334667778888999999999999998888865444433222   22211    12333 45566777877654333   


Q ss_pred             CCeEEEEe--e-CChhhHHHHHHHHHHHHHHHHH
Q 014936          380 KNWLRVTF--A-VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       380 ~~~iRi~~--~-~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      +..+-+++  - ..++--++++..|.++++++..
T Consensus       416 P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~  449 (491)
T KOG1383|consen  416 PAAIHICVTRVHAREDVADRFVADIRKVVEELKS  449 (491)
T ss_pred             CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence            23455555  2 3344457777888887777654

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.45  E-value=3.3e-10  Score=110.64  Aligned_cols=256  Identities=13%  Similarity=0.118  Sum_probs=161.8

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC----------
Q 014936           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP----------  123 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~----------  123 (415)
                      .+.+...+...+-+.....|...++...+++.+.+++.+..|++-  ..=.+|+|||.|+..++....+.          
T Consensus        96 ~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~  173 (608)
T TIGR03811        96 MPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKEV  173 (608)
T ss_pred             HHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhhc
Confidence            344444443433333333444445678999999999999888753  33458899999888766554310          


Q ss_pred             ------------------------------------------C------CEEEEcCCCCcchHHHHHhCCCe---EEEee
Q 014936          124 ------------------------------------------G------ANILLPRPGFPIYELSAAFRHIE---VRHFD  152 (415)
Q Consensus       124 ------------------------------------------g------d~vi~~~p~y~~~~~~~~~~g~~---~~~~~  152 (415)
                                                                |      .+++++.-.|+++...+...|+.   ++.+|
T Consensus       174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vp  253 (608)
T TIGR03811       174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVP  253 (608)
T ss_pred             cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEee
Confidence                                                      0      05888888899999999999984   78888


Q ss_pred             ccCCCCCCCChhHHHhhcCC----C--ceEEEecCCCCccccCCCHHHHHHHHHHH---hhcCc--EEEEccccCCcc--
Q 014936          153 LLPDKGWEVDLDDIESLADQ----N--TVALVIINPGNPCGNVYSYQHLQKLAETA---NKLKT--LVIADEVYGHLV--  219 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~----~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~---~~~~~--~li~De~~~~~~--  219 (415)
                      ++  .++.+|++.|++.+++    .  +-+|+.+-.+..+|.+   +++.+|+++|   +++|+  ++++|.+|+++.  
T Consensus       254 vD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~  328 (608)
T TIGR03811       254 VD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRA  328 (608)
T ss_pred             cC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccchhhh
Confidence            75  4567999999988753    1  3345666778889999   6777777776   67887  699999999853  


Q ss_pred             -cCCCC--cc----------------------------cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          220 -FGDKP--FV----------------------------PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       220 -~~~~~--~~----------------------------~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                       +-...  ..                            .+..+... ..|.+ .+||. +......|.++.++..     
T Consensus       329 l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~A-DSItv-DpHK~-g~~Py~~G~ll~Rd~~-----  400 (608)
T TIGR03811       329 IFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEA-ESVTI-DPHKM-GYIPYSAGGIVIQDIR-----  400 (608)
T ss_pred             hhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCc-eEEEe-Ccccc-cccCCCeEEEEEeCHH-----
Confidence             11100  00                            01111111 12433 78998 6666778999987632     


Q ss_pred             HHHHHHHHhh---cc------------ccCCchhHHH--HHHHHhhCCC--cHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          269 PKVVERMKKY---FD------------ILGDPATFIQ--AAVPSILQQP--DEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       269 ~~~~~~~~~~---~~------------~~~~~~~~~~--~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                        +.+.+...   ..            .....+....  .++...++..  ..+.+.++.++..+.++++.+.|+.+
T Consensus       401 --~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~  475 (608)
T TIGR03811       401 --MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL  475 (608)
T ss_pred             --HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              33322211   00            0112222222  2222222222  35678888899999999999999874

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.39  E-value=5e-10  Score=105.90  Aligned_cols=235  Identities=14%  Similarity=0.093  Sum_probs=152.2

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~  157 (415)
                      -+.+..+..|+.++       .....++++|+|.++.+++.+++.+||.|+++.+||-+....+...|+..+++......
T Consensus        71 ~i~eAqe~aA~~fg-------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np  143 (557)
T COG1982          71 PIKEAQELAARVFG-------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP  143 (557)
T ss_pred             cHHHHHHHHHHHhC-------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence            35677788888773       34578999999999999999999999999999999999999999999998887643222


Q ss_pred             ----CCCCChhHHHhhcCC--Cc-eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc
Q 014936          158 ----GWEVDLDDIESLADQ--NT-VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (415)
Q Consensus       158 ----~~~~~~~~l~~~~~~--~~-~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  230 (415)
                          -.+++.+.+++.+..  .. +++++++|+. -|++++   +++|.++++..++++.+|+++....-..... +- +
T Consensus       144 ~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l-~~-~  217 (557)
T COG1982         144 LYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPML-PE-S  217 (557)
T ss_pred             cccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccC-cc-h
Confidence                145789999886643  34 7788988865 578855   6677777779999999999997644211111 11 1


Q ss_pred             cCCCCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhcc-c-cCCchhHHHHHHH---HhhCCCcHHH
Q 014936          231 FGSTVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFD-I-LGDPATFIQAAVP---SILQQPDEVF  304 (415)
Q Consensus       231 ~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~a~~---~~l~~~~~~~  304 (415)
                      -.....+++..|.+|.  .+++. .+.+...+.. ..    -.++++.... + +.+++.+..+.+.   ..........
T Consensus       218 ~~~~~~~~~tqS~HK~--l~alSQaS~iHv~~~~-~~----~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l  290 (557)
T COG1982         218 ALNGGADFVTQSTHKL--LAALSQASMIHVKDGR-AV----NHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGREL  290 (557)
T ss_pred             hhhcCceEEEechhhh--hhhhhhhHHHhhCCCc-cC----CHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHH
Confidence            1113456899999998  34444 4445554311 11    1234443322 1 2333333322222   2222222344


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          305 FKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      +++..+..-+.++.+.+.+++++++.++
T Consensus       291 ~~~~~~~~i~~r~~~~~~~~~~~~~~~~  318 (557)
T COG1982         291 WQEVIDEAIDFRKALRRLINEIGFFPVL  318 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCeeec
Confidence            4445666667777777777777666644

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.36  E-value=1.3e-09  Score=95.77  Aligned_cols=336  Identities=15%  Similarity=0.111  Sum_probs=197.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhh--CCCCCCCC----cEEEeCChHHHHHHHHHHhcCC
Q 014936           52 HTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRD--LPYKLTPN----DVFVTSGCTQAIDVAMALLSRP  123 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~--~~~~~~~~----~i~i~~g~~~al~~~~~~l~~~  123 (415)
                      -.+.++.+|+-..+.+....+|+-  ..|-.+....+.....++  --++++|+    +|.-. +++.|+..+..++++|
T Consensus        51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~-SGSPANfavYtall~P  129 (477)
T KOG2467|consen   51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPY-SGSPANFAVYTALLKP  129 (477)
T ss_pred             chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccC-CCCchhhHHHhhhcCC
Confidence            346888899888887644444442  222234443333322211  01234443    33333 4567778899999999


Q ss_pred             CCEEEEcCCCCcc-hHHHHHhCCCeE---------EEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCH
Q 014936          124 GANILLPRPGFPI-YELSAAFRHIEV---------RHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       124 gd~vi~~~p~y~~-~~~~~~~~g~~~---------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~  192 (415)
                      +++|.--+.-+.+ .......-+-++         ..+.+++..+ -+|-+.|++.... +++++ ++..+. --..++.
T Consensus       130 h~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~frPk~i-iaG~Sa-Y~R~~DY  206 (477)
T KOG2467|consen  130 HERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDKLEKTATLFRPKLI-IAGTSA-YSRLIDY  206 (477)
T ss_pred             CCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHHHHHHHHhcCCcEE-Eecccc-chhhccH
Confidence            9999744322221 111111111222         2233455444 5899999875443 45544 443211 1122344


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC----
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----  267 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----  267 (415)
                      .   ++.++|.+.|.+++.|-+|.- ++-.+.-+.|+..-+     |+..+.+|+  +-|.|.|.+.-++--.-.+    
T Consensus       207 a---R~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~D-----iVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~g  276 (477)
T KOG2467|consen  207 A---RFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCD-----IVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQG  276 (477)
T ss_pred             H---HHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccc-----eeecccccc--ccCCcceeEEEeccCCcCCCCCC
Confidence            4   444555588999999999954 333344444443322     778899998  6788888877643110000    


Q ss_pred             ---hHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936          268 ---KPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM  342 (415)
Q Consensus       268 ---~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~  342 (415)
                         --++-++++....  +.+++......+++.+|++-....+....+++.++.+.+.+.|.++ |...+........++
T Consensus       277 ~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvL  355 (477)
T KOG2467|consen  277 KEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVL  355 (477)
T ss_pred             CcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEE
Confidence               0134445544322  3356666677778888887655677888899999999999999988 777554445556677


Q ss_pred             EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----CCeEEEEe-e-----CChhhHHHHHHHHHHHHHH
Q 014936          343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-----KNWLRVTF-A-----VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~-~-----~~~~~l~~~l~~l~~~~~~  407 (415)
                      +++.....     +...++..|+.-+|.++--..++.     ++.||+.. +     ..++|+++..+-|.++++-
T Consensus       356 vDLr~~G~-----dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~i  426 (477)
T KOG2467|consen  356 VDLRPKGV-----DGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVKI  426 (477)
T ss_pred             EeccccCC-----chHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHHH
Confidence            77765322     334456777777888765555553     78999987 3     3468888888877777653

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.35  E-value=1.4e-09  Score=97.97  Aligned_cols=315  Identities=16%  Similarity=0.129  Sum_probs=195.4

Q ss_pred             CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh-HH----HHHHHHHHh-cCCC----CEEEEcCCCCcchHHHHHhCC
Q 014936           76 TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC-TQ----AIDVAMALL-SRPG----ANILLPRPGFPIYELSAAFRH  145 (415)
Q Consensus        76 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~-~~----al~~~~~~l-~~~g----d~vi~~~p~y~~~~~~~~~~g  145 (415)
                      ..|+.++...+.+|+.+--    .-|.|-+.+.+ .+    ++. +++.. -..|    +.+++++..|......+...|
T Consensus       104 vqG~l~li~~Lq~~L~~IT----G~DavsLQP~AGAqGE~aGll-~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G  178 (496)
T COG1003         104 VQGYLELIYELQEWLKEIT----GMDAVSLQPNAGAQGEYAGLL-AIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAG  178 (496)
T ss_pred             HHHHHHHHHHHHHHHHHhc----CCceeeccCCCCcchhhHHHH-HHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcC
Confidence            3677888888888887522    34566554442 22    333 23332 2333    589999999999999999999


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCc
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~  225 (415)
                      .+|+.|+.+.+  ..+|+++|+++..+++.++.+++|+. .|..  .+.+.+|+++.+++|..+..|.+.-....+-..+
T Consensus       179 ~~VV~V~~~~~--G~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP  253 (496)
T COG1003         179 FKVVVVKCDEN--GNVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIVGLARP  253 (496)
T ss_pred             ceEEEEecCCC--CCccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhhccccc
Confidence            99999998654  45999999999999999999999985 3443  2779999999999999999999976655443333


Q ss_pred             ccccccCCCCCeEEEccCccccCC----CCceEEEEEeeCCCC-CCChH----HHHH-HHH--hh----ccccCCchhHH
Q 014936          226 VPMGVFGSTVPILTLGSLSKRWIV----PGWRLGWFVTTDPCG-MFRKP----KVVE-RMK--KY----FDILGDPATFI  289 (415)
Q Consensus       226 ~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~-~~~~~----~~~~-~~~--~~----~~~~~~~~~~~  289 (415)
                      ..   ++.+   |+=.-++|+|..    +|..+|=+.+...-. ....|    +..+ .+.  ..    .......|...
T Consensus       254 Gd---~G~D---V~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~i  327 (496)
T COG1003         254 GD---MGFD---VVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASI  327 (496)
T ss_pred             cc---cccc---eEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchH
Confidence            22   3332   333358888853    345566666532100 00000    0000 000  00    00011122222


Q ss_pred             HHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936          290 QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE  367 (415)
Q Consensus       290 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~  367 (415)
                      ...+.+++.....+.+++..+..--+++++.++|+..=.+. + .+.  ...-+.+.....+-+...+..++.++|+ .+
T Consensus       328 l~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~-y-~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLl-D~  404 (496)
T COG1003         328 LPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVP-Y-TGENRVAHECILDARPLKKETGVRALDVAKRLL-DY  404 (496)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccc-c-CCCCcceeEEEeechHhHhhcCCcHHHHHHHHH-hc
Confidence            33333344444457788888888889999999998621222 1 333  2333444443211112225678888875 57


Q ss_pred             CeEEEcCCCCC--CCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936          368 SVIILPGTAVG--LKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       368 gi~v~~g~~~~--~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      |+.- |--+|-  ..+.+-|=.  +-++++||..++++.++.++..+
T Consensus       405 GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~  450 (496)
T COG1003         405 GFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA  450 (496)
T ss_pred             CCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8874 444454  467777777  45779999999999988877544

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.35  E-value=1.6e-09  Score=93.97  Aligned_cols=298  Identities=16%  Similarity=0.118  Sum_probs=189.7

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCCcc-----hHHHHHhCCCeEEEe
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPI-----YELSAAFRHIEVRHF  151 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~--~gd~vi~~~p~y~~-----~~~~~~~~g~~~~~~  151 (415)
                      .-++-+.+.+.+....  +..+.+++++.+++-.++.++.+..+  +|++||+++-.-++     ....+...+..   +
T Consensus        74 W~~lp~~lgdklApLi--GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~  148 (407)
T COG3844          74 WFDLPERLGDKLAPLI--GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---Y  148 (407)
T ss_pred             hhhchhHHHHHhhhhh--cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---c
Confidence            3455555555554333  45788999999999988888877653  58888888644332     22233333433   1


Q ss_pred             eccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936          152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF  231 (415)
Q Consensus       152 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  231 (415)
                      ++    ...+.+++++++++..+..|++++.+.-||+.+   ++.+|-++++++|++++-|-+|+.+.    -+..+...
T Consensus       149 ~~----~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsaGa----vp~~Lh~~  217 (407)
T COG3844         149 DL----EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSAGA----VPVDLHAA  217 (407)
T ss_pred             cc----eeeeChHHHHHhhccceEEEEecccccccccee---eHHHHHHHHHhcCceEEeehhcccCC----cceeeccc
Confidence            11    112467789999988888889999999999995   58888888999999999999998743    33334444


Q ss_pred             CCCCCeEEEccCccccCC-CCceEEEEEeeCCC--------CCCChH---HHHHHHHhh----ccccCCchhHHHHHHHH
Q 014936          232 GSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPC--------GMFRKP---KVVERMKKY----FDILGDPATFIQAAVPS  295 (415)
Q Consensus       232 ~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~--------~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~a~~~  295 (415)
                      +.+   +-|++..|.+.. ||-..|..+.++..        .+++..   ++.+.+...    ....++++..+..++..
T Consensus       218 gaD---faigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~  294 (407)
T COG3844         218 GAD---FAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEG  294 (407)
T ss_pred             CCC---eeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhh
Confidence            443   778888898743 55444444443211        111000   001000000    00123445555566666


Q ss_pred             hhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC-C--CCcCCCCCCC----ceEEEEecCccccCCCCCHHHHHHHHHhhcC
Q 014936          296 ILQQPDEVFFKKTLNLLKQSVDICYNKIKEI-P--CISCPHKPEG----SMAVMLKLNLSLLDDIIDDIDFCFKLAKEES  368 (415)
Q Consensus       296 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~~~~p~~----g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~g  368 (415)
                      .|+...+-.+.+.+++--...+++.+.++.. +  ++. +..|..    |-.+.+..+        ...++.+.| .+.|
T Consensus       295 aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~-l~tPr~~~~rGsqvS~~hp--------~~~~V~qaL-i~rG  364 (407)
T COG3844         295 ALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLT-LVTPRAHEERGSQVSLYHP--------HGYQVMQAL-IDRG  364 (407)
T ss_pred             hhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcE-EeccchhhhccceeeEecC--------cHHHHHHHH-HHcC
Confidence            6654434447888888888999999998853 2  455 334432    455665565        456666665 6679


Q ss_pred             eEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHHHHHH
Q 014936          369 VIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       369 i~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      |..    .|..++.+|+.++   .+-+|+-.+++.|.++++...
T Consensus       365 Vig----D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a  404 (407)
T COG3844         365 VIG----DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA  404 (407)
T ss_pred             ccc----cccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence            862    3555789999995   578999999999999987643

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=99.34  E-value=2.1e-10  Score=98.16  Aligned_cols=348  Identities=12%  Similarity=0.099  Sum_probs=200.2

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      ++..++|.-.+..-   .--.+|++.+|....+..... .++-.    .+|-+-....... +.   .-+-+++++++++
T Consensus        45 ~g~~yLDCInNVaH---vghchp~VV~A~~kQmat~~tN~RFlh----d~lv~cA~~l~st-lP---eLsvc~F~NSGSE  113 (452)
T KOG1403|consen   45 EGTRYLDCINNVAH---VGHCHPEVVRAGAKQMATISTNNRFLH----DELVQCARTLTST-LP---ELSVCFFVNSGSE  113 (452)
T ss_pred             CcccHHHHhhhhhh---cccCCHHHHHHHHHHHhHhcccchhhH----HHHHHHHHHHhhc-CC---CceEEEEecCCch
Confidence            35555554333221   123578898888777664221 12211    2333322222211 11   2346789999999


Q ss_pred             HHHHHHHHhc---CCCCEEEEcCCCCcchHHHHH-------hCCC---eEEEeeccCC-CC----C----C-------CC
Q 014936          112 AIDVAMALLS---RPGANILLPRPGFPIYELSAA-------FRHI---EVRHFDLLPD-KG----W----E-------VD  162 (415)
Q Consensus       112 al~~~~~~l~---~~gd~vi~~~p~y~~~~~~~~-------~~g~---~~~~~~~~~~-~~----~----~-------~~  162 (415)
                      |+.++++...   +..|. |+.+..|++......       ..|.   ++.++.+-|. +-    +    .       .-
T Consensus       114 ANDLALRLAR~ftkhqDv-ItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Y  192 (452)
T KOG1403|consen  114 ANDLALRLARNFTKHQDV-ITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALY  192 (452)
T ss_pred             hhHHHHHHHHhhcccCce-EEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhh
Confidence            9999998864   34454 445555654433211       0111   1122222110 00    0    0       01


Q ss_pred             hhHHHhhcC----C-CceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          163 LDDIESLAD----Q-NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       163 ~~~l~~~~~----~-~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                      .+.+++.+.    . +..+.++... ++-.|+++ |..-.+++++..+.+|-..|.||++-+|..-|...+.++.++.-+
T Consensus       193 ad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiP  272 (452)
T KOG1403|consen  193 ADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIP  272 (452)
T ss_pred             hhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhcccc
Confidence            122333221    1 1222233333 55567765 455588999999999999999999999888788877776665433


Q ss_pred             CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL  312 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  312 (415)
                      .++   ++.|. ...|.+++.+++.+        ++.+.+...   ...+++.+|++.++..+.++..+++.+..+.+++
T Consensus       273 DIV---tmgKp-mGNGhPVa~Vattk--------eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~v  340 (452)
T KOG1403|consen  273 DIV---TMGKP-MGNGHPVAAVATTK--------EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQV  340 (452)
T ss_pred             chh---eeccc-CCCCCeeeEEeccH--------HHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHH
Confidence            333   66798 67899999999865        788888763   2345788999999988888765556666666666


Q ss_pred             HHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-
Q 014936          313 KQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-  387 (415)
Q Consensus       313 ~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-  387 (415)
                      -+..+.+...++. .+.+- . ...-|+|+-+++-+...   ++.......+.++-+.++|.++.-..  ..+.+.|-. 
T Consensus       341 G~~L~~lL~~~k~kh~~IG-D-vRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPP  416 (452)
T KOG1403|consen  341 GEKLEVLLRRLKQKHECIG-D-VRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPP  416 (452)
T ss_pred             HHHHHHHHHHHhhhcccee-c-cccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCC
Confidence            6666555555553 33333 2 34557777776632111   11112345556666668898865322  135566655 


Q ss_pred             -eCChhhHHHHHHHHHHHHHHH
Q 014936          388 -AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       388 -~~~~~~l~~~l~~l~~~~~~~  408 (415)
                       +.++++.++.+..|.+++.-.
T Consensus       417 mCFneena~e~v~~ld~iLT~m  438 (452)
T KOG1403|consen  417 MCFNEENADEFVLGLDEILTVM  438 (452)
T ss_pred             cccChhhHHHHHHHHHHHHHHH
Confidence             467777777777777776543

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.32  E-value=3.8e-09  Score=107.03  Aligned_cols=280  Identities=14%  Similarity=0.147  Sum_probs=170.2

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS---RPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (415)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~---~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~  152 (415)
                      -++...+++..      +.+..+.-+..++|++-++++.+..   +++++|++++-.|+.+....    +..|.+++.+ 
T Consensus       112 ~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~-  184 (939)
T TIGR00461       112 LNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV-  184 (939)
T ss_pred             HHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE-
Confidence            44556666665      5677788888888888787776642   23479999999998877544    4678888775 


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                               |+++|+..+  ++.++++.+|+. .|.+   +++++|+++++++|.+++++.-...+.    ...+...++
T Consensus       185 ---------~~~~l~~~~--~~~~v~~q~Pn~-~G~i---ed~~~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~G  245 (939)
T TIGR00461       185 ---------DCSDIKKAV--DVFGCLLQYPAT-DGSI---LDYKQLIDALHSHKSLVSVAADLMALT----LLTPPGHYG  245 (939)
T ss_pred             ---------cHHHHhhcC--CEEEEEEECCCC-CeEE---ecHHHHHHHHHHcCCEEEEEechHHhC----CcCCHHHcC
Confidence                     345566555  466777888875 8888   689999999999999999854433222    122223344


Q ss_pred             CCCCeEEEccCccccCC----CCceEEEEEeeCCC---------CCCCh----HHHH-------HHHHhhccccC-Cch-
Q 014936          233 STVPILTLGSLSKRWIV----PGWRLGWFVTTDPC---------GMFRK----PKVV-------ERMKKYFDILG-DPA-  286 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~---------~~~~~----~~~~-------~~~~~~~~~~~-~~~-  286 (415)
                      .+   |++++ +|.|+.    +|.-.|++.+++.-         .+..|    +.+.       +.++..+.++. +.+ 
T Consensus       246 aD---i~vg~-~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~q  321 (939)
T TIGR00461       246 AD---IVLGS-SQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQ  321 (939)
T ss_pred             Cc---EEeeC-CCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHH
Confidence            43   55554 444454    24447777764420         00000    0000       11111111111 122 


Q ss_pred             hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhh
Q 014936          287 TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE  366 (415)
Q Consensus       287 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~  366 (415)
                      .+...++..++..+..+.+++..++...++.++.+.|++. |++.. .+  .+|--+.+...   . .+..++.+.+ .+
T Consensus       322 aL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~-~~--~fF~~~~v~~~---~-~~~~~i~~~~-~~  392 (939)
T TIGR00461       322 VLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-PHELI-NK--TWFDTLTVKVG---N-GISSELLKAA-EE  392 (939)
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CC--CccceEEEEeC---C-CCHHHHHHHH-HH
Confidence            2222222223443456889999999999999999999985 88833 33  33422222210   0 1355666665 56


Q ss_pred             cCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936          367 ESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK  402 (415)
Q Consensus       367 ~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~  402 (415)
                      .||.+....    .+.+++|+  .+++++++.+++.+.
T Consensus       393 ~gi~l~~~~----~~~i~~s~~E~~t~~di~~l~~~~~  426 (939)
T TIGR00461       393 FNINLRAVD----TTTVGIALDETTTKADVENLLKVFD  426 (939)
T ss_pred             CCCeeeecC----CCEEEEEeecCCCHHHHHHHHHHhc
Confidence            699976532    46899999  478899999999985

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.19  E-value=1.1e-08  Score=95.14  Aligned_cols=281  Identities=15%  Similarity=0.174  Sum_probs=145.1

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (415)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l---~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~  152 (415)
                      -++...+++..      +.+.-+.-+..+++++-+.++.+.   .++.++|+++...|+.+....    ...|++++.++
T Consensus       113 fe~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~  186 (429)
T PF02347_consen  113 FEYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVP  186 (429)
T ss_dssp             HHHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-
T ss_pred             HHHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEec
Confidence            34555555555      344445556667666655554443   344569999999999887744    45788888888


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      .+...  ..|        ++++.+|++.+|+. .|.+   +++++|+++++++|..+++ .+.-. ....  ..+...++
T Consensus       187 ~~~~~--~~d--------~~~~a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad~~-aL~~--l~~Pge~G  248 (429)
T PF02347_consen  187 LDEDG--TTD--------DDDTAAVMVQNPNT-FGVF---EDIKEIADIAHAAGALVIV-GADPN-ALGG--LKSPGEYG  248 (429)
T ss_dssp             BBTTC--SB---------STTEEEEEEESS-T-TSB-----THHHHHHHHHHTT-EEEE-CGGCC-GCCT--C--GGGGT
T ss_pred             ccccC--Ccc--------ccCeEEEEeecCCC-CceE---eeHHHHHHHHHHcCCEEEE-ecCHH-HHhC--cCChhhcC
Confidence            65432  223        56788999999986 7888   7799999999999998887 33322 2221  12233455


Q ss_pred             CCCCeEEEccCccccCCC----CceEEEEEeeCCCCCC--------------ChHH-------HHHHHHhhcccc-CCch
Q 014936          233 STVPILTLGSLSKRWIVP----GWRLGWFVTTDPCGMF--------------RKPK-------VVERMKKYFDIL-GDPA  286 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~--------------~~~~-------~~~~~~~~~~~~-~~~~  286 (415)
                      .|   |++++ +|.||.|    |.-.|++.+++.- ..              ++..       --+.+++.+.++ .+.+
T Consensus       249 AD---I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l-~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctn  323 (429)
T PF02347_consen  249 AD---IVVGE-HQTFGIPMGFGGPGAGFFAVREDL-VRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTN  323 (429)
T ss_dssp             -S---EEEEC-CTTTT---CCC-S--EEEEE-GGG-GGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS
T ss_pred             cc---EEeeC-CCCCcccCCCCCCCeeeEEEhhhh-hhhCCCceecccccccccceeeeccccccccccccchhhhhhhh
Confidence            54   66765 8887653    5668888886521 00              0000       001222222212 2222


Q ss_pred             -hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHh
Q 014936          287 -TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAK  365 (415)
Q Consensus       287 -~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~  365 (415)
                       .+...++..++..+..+.+++..++...++.++.+.|++..+.. +  ....+|=++....       .. ....++++
T Consensus       324 qaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~--~~~~f~e~v~~~~-------~~-~~~~~l~~  392 (429)
T PF02347_consen  324 QALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-F--DNPFFFEFVVVFS-------KD-KEVEELLK  392 (429)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-S--SSSSBSSEEEEES-------S--HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c--CCCCceeeeeecC-------Cc-HHHHHHHH
Confidence             22223344445445578999999999999999999999873443 2  2333322221211       11 22223332


Q ss_pred             hcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHH
Q 014936          366 EESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRI  401 (415)
Q Consensus       366 ~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l  401 (415)
                      + ++.-.-+..+...+++-+++.  .++++|+.+++.|
T Consensus       393 ~-~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f  429 (429)
T PF02347_consen  393 R-GIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF  429 (429)
T ss_dssp             T-T----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred             H-HHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence            2 333211111222458888884  6789999988764

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.18  E-value=3.3e-09  Score=96.06  Aligned_cols=225  Identities=19%  Similarity=0.122  Sum_probs=152.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHH-HHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRR-AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL  129 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~-~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~  129 (415)
                      ....+++++++........-..|.-..|...-|- .+++.+.   + ....+.++++++.+.++..++.++.. +.+|++
T Consensus        37 s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~---~-~~~aea~~ivnnn~aAVll~~~al~~-~~EvVi  111 (395)
T COG1921          37 SLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLC---G-LTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVV  111 (395)
T ss_pred             ccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHh---c-ccchhheeeECCcHHHHHHHHhhhcc-CCeEEE
Confidence            3456889999988877542224433233222222 3333332   2 23467899999999999999999876 444443


Q ss_pred             c-----CCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          130 P-----RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       130 ~-----~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      .     +++++++.+..+..|++++.+...    ......+++.++.+++.+++-++-+|- |+.-. =.+++++++|++
T Consensus       112 s~g~lV~gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ta~llkV~s~~~-~f~~~-l~~~~l~~ia~~  185 (395)
T COG1921         112 SRGELVEGGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINENTALLLKVHSSNY-GFTGM-LSEEELVEIAHE  185 (395)
T ss_pred             EccccccCCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccCCeeEEEEeeccc-ccccc-ccHHHHHHHHHH
Confidence            2     268888999999999999988642    235789999999999999887776653 33311 135668888889


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccC
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILG  283 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  283 (415)
                      +|+++++|.+.+...-...........+.+   ++++|-.|.  +.|.+.|.+++.+        +++++++.. .....
T Consensus       186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaD---LV~~SgdKl--lgGPqaGii~GkK--------elI~~lq~~~l~Ral  252 (395)
T COG1921         186 KGLPVIVDLASGALVDKEPDLREALALGAD---LVSFSGDKL--LGGPQAGIIVGKK--------ELIEKLQSHPLKRAL  252 (395)
T ss_pred             cCCCEEEecCCccccccccchhHHHhcCCC---EEEEecchh--cCCCccceEechH--------HHHHHHHhhhhhhhh
Confidence            999999999987765322222233334444   778899998  4577789998866        788888776 33345


Q ss_pred             CchhHHHHHHHHhhCC
Q 014936          284 DPATFIQAAVPSILQQ  299 (415)
Q Consensus       284 ~~~~~~~~a~~~~l~~  299 (415)
                      .......+++.++|+.
T Consensus       253 rv~K~tla~l~~aLe~  268 (395)
T COG1921         253 RVDKETLAALEAALEL  268 (395)
T ss_pred             hcCcHhHHHHHHHHHH
Confidence            5666777777777664

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.17  E-value=2e-09  Score=95.47  Aligned_cols=197  Identities=22%  Similarity=0.248  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCC
Q 014936           55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA  125 (415)
Q Consensus        55 ~~~~~a~~~~~~~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i---~~g~~~al~~~~~~l~~~gd  125 (415)
                      ..|.+|+++.-..      .+.+.|.+ .|-..|.+-.|+.+        ..+..++   .-++|+|+.+++..+++|||
T Consensus        27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D-~GRd~le~iyA~vf--------gaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD   97 (403)
T PF06838_consen   27 LKVLKAFQENRVSDSHFAGTTGYGYDD-IGRDKLERIYADVF--------GAEDALVRPQFVSGTHAIALALFGVLRPGD   97 (403)
T ss_dssp             HHHHHHHHHTT--GGGCS---TT-TT--HHHHHHHHHHHHHC--------T-SEEEEETTS-SHHHHHHHHHHHH--TT-
T ss_pred             HHHHHHHHHcCCChhhcCCCCcCCCCC-ccHHHHHHHHHHHh--------CchhhhhcccccchHHHHHHHHHhcCCCCC
Confidence            4566666654221      12234444 35556666666665        2444444   34679999999999999999


Q ss_pred             EEEEc-CCCCcchHHH----------HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC-CCccccCCCHH
Q 014936          126 NILLP-RPGFPIYELS----------AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP-GNPCGNVYSYQ  193 (415)
Q Consensus       126 ~vi~~-~p~y~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~  193 (415)
                      +.+.. -.-|......          ++.+|+....+++.+  +..+|.+.+++++++++++++|... ...+-..++.+
T Consensus        98 ~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~--dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~  175 (403)
T PF06838_consen   98 ELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTE--DGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIE  175 (403)
T ss_dssp             EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-T--TSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HH
T ss_pred             eEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecC--CCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHH
Confidence            99854 3444444433          345677888888754  3469999999999999999988754 33344458889


Q ss_pred             HHHHHHHHHhhc--CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc--eEEEEEeeCCCCCCChH
Q 014936          194 HLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW--RLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       194 ~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~~~~~~~~~~~~~~  269 (415)
                      +++++++++++.  ++++++|.+|+.|.-.  ..+  ...+.+   ++.+|+=|.-| .|+  --||++++.        
T Consensus       176 ~I~~~i~~vk~~~p~~iifVDNCYGEFvE~--~EP--~~vGAD---l~aGSLIKNpG-GgiAptGGYIaGr~--------  239 (403)
T PF06838_consen  176 EIKEIIKFVKEINPDVIIFVDNCYGEFVET--QEP--TEVGAD---LMAGSLIKNPG-GGIAPTGGYIAGRK--------  239 (403)
T ss_dssp             HHHHHHHHHHHH-TTSEEEEE-TTTTTTSS--S-G--GGGT-S---EEEEETTSGGG-TTT-SS-EEEEESH--------
T ss_pred             HHHHHHHHHHhhCCCeEEEEeCCcceeccc--cCc--cccchh---heeccceeCCC-CCccCcCCEEechH--------
Confidence            999999999875  7899999999997733  221  234444   89999999843 332  258998865        


Q ss_pred             HHHHHHHhh
Q 014936          270 KVVERMKKY  278 (415)
Q Consensus       270 ~~~~~~~~~  278 (415)
                      ++++.....
T Consensus       240 ~lVe~~a~R  248 (403)
T PF06838_consen  240 DLVERAAYR  248 (403)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            677766554

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=99.09  E-value=3.7e-07  Score=83.24  Aligned_cols=323  Identities=10%  Similarity=0.045  Sum_probs=189.7

Q ss_pred             CCCCcHHHHHHHHHHHhhhCCCC-------CCCCcEEEeCChHHHHHHHHHHhc-------CCC-----------C-EEE
Q 014936           75 PTAGLPLTRRAIAEYLSRDLPYK-------LTPNDVFVTSGCTQAIDVAMALLS-------RPG-----------A-NIL  128 (415)
Q Consensus        75 ~~~g~~~lr~~ia~~~~~~~~~~-------~~~~~i~i~~g~~~al~~~~~~l~-------~~g-----------d-~vi  128 (415)
                      ..+...||+.-+-+|+.+..+.+       ..+..=++..+++++..+++.+..       +.+           + .+.
T Consensus       107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y  186 (511)
T KOG0628|consen  107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY  186 (511)
T ss_pred             cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence            33467899999999999876643       123344566666677666665532       112           1 456


Q ss_pred             EcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc-----eEEEecCCCCccccCCCHHHHHHHHHHHh
Q 014936          129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT-----VALVIINPGNPCGNVYSYQHLQKLAETAN  203 (415)
Q Consensus       129 ~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~v~i~~p~nptG~~~~~~~l~~i~~~~~  203 (415)
                      ..+.+|.+....+...|++.+.++.+.  +++++.+.|+++++++.     ..++..+- .-||.+ ..+++.+|..+|+
T Consensus       187 ~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~c-a~D~l~elg~Vc~  262 (511)
T KOG0628|consen  187 CSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSSC-AFDELEELGPVCR  262 (511)
T ss_pred             ecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCcccc-ccccHHHhcchhh
Confidence            778999999999999999999998753  78899999999987532     22222222 123332 3378999999999


Q ss_pred             hcCcEEEEccccCCcccCCCCcccc-cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC----CChHHHHHHHHhh
Q 014936          204 KLKTLVIADEVYGHLVFGDKPFVPM-GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM----FRKPKVVERMKKY  278 (415)
Q Consensus       204 ~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~----~~~~~~~~~~~~~  278 (415)
                      ++|+|+++|.+|++..+.-.....+ ..+...+  -+....||+ ++--+-+..+...+...+    .=+|.+.+.-...
T Consensus       263 ~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~  339 (511)
T KOG0628|consen  263 EEGLWLHVDAAYAGSAFICPEFRYLMRGIEYAD--SFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQG  339 (511)
T ss_pred             hcCEEEEeehhhccccccCHHHHHHhhcchhhc--cccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcchhhc
Confidence            9999999999999766554332221 1111111  112234555 333333333333332100    0001111111000


Q ss_pred             cc--ccCCchhHH--HHHHHHh--hCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          279 FD--ILGDPATFI--QAAVPSI--LQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       279 ~~--~~~~~~~~~--~~a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      ..  .....-|++  ..++..+  ++...-+.+++++++..+..+.+.+.+.+-+.++++..+.=|+ +.+++...+   
T Consensus       340 ~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgL-vcFRlk~~N---  415 (511)
T KOG0628|consen  340 SAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGL-VCFRLKGDN---  415 (511)
T ss_pred             cCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccce-eEEeecCCc---
Confidence            00  000001111  1122211  2222235667777777778888887777767788543333344 444665421   


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                       ...+.++.++-...+|.+.|.+.-+ .-.+|++++   ++.++++.+.+.|.+....+..
T Consensus       416 -~~ne~Ll~~in~~g~i~l~~~~l~g-k~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~  474 (511)
T KOG0628|consen  416 -EINEALLNRLNSSGRIHLVPASLHG-KFVLRFAVCSPLTNESDIDEAWKIIFEAADELFE  474 (511)
T ss_pred             -HHHHHHHHHHHhcCcEEEEEeeecc-eEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence             2466778888777889998876533 346899993   5679999999999998887544

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=99.04  E-value=6.5e-08  Score=85.27  Aligned_cols=312  Identities=14%  Similarity=0.115  Sum_probs=192.9

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-----CEEEEcCCCCcchH-HHHHhCC
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG-----ANILLPRPGFPIYE-LSAAFRH  145 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~g-----d~vi~~~p~y~~~~-~~~~~~g  145 (415)
                      .|.-..++..|++++.+.+        .-+.++-|.-|..|=++++..+.++|     .+.++++..|.... ...+..|
T Consensus        74 AYagsrs~~~L~~avkdif--------Gfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng  145 (471)
T COG3033          74 AYAGSRSYYALADAVKDIF--------GFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING  145 (471)
T ss_pred             hhcccccHHHHHHHHHHhc--------CceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence            6776778889999999987        34788889988888888888877544     45556666666443 3456677


Q ss_pred             CeEEEeeccCCC--------CCCCChhHHHhhcCC----CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936          146 IEVRHFDLLPDK--------GWEVDLDDIESLADQ----NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (415)
Q Consensus       146 ~~~~~~~~~~~~--------~~~~~~~~l~~~~~~----~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D  212 (415)
                      ..++.++++...        ...+|++.|++.+++    +...|+++.. |...|+..|.+-+++..++|++|++.++.|
T Consensus       146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D  225 (471)
T COG3033         146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD  225 (471)
T ss_pred             CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence            777666653211        135789999998865    3344554444 457899999999999999999999999999


Q ss_pred             cccC-CcccC-CCC-----ccccccc-----CCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhc
Q 014936          213 EVYG-HLVFG-DKP-----FVPMGVF-----GSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF  279 (415)
Q Consensus       213 e~~~-~~~~~-~~~-----~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~  279 (415)
                      .+.. .-++- ...     ..++..+     .-.+  -+..|.-|- ++.-  + |+++.++ ...+   ++....+...
T Consensus       226 a~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD--~~~mS~KKD-~lvn--mGGfl~~~D-~~~f---Dvy~~~~~~~  296 (471)
T COG3033         226 AARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD--GCTMSAKKD-GLVN--MGGFLCFKD-DSFF---DVYEECRTLV  296 (471)
T ss_pred             hhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh--hheeecccc-ceec--cccEEEecC-ccHH---HHHHHHHhhe
Confidence            8742 11111 111     1111111     0011  234466677 4322  3 4455444 2222   3444444332


Q ss_pred             c------ccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc----c
Q 014936          280 D------ILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL----S  348 (415)
Q Consensus       280 ~------~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~----~  348 (415)
                      .      ..++.+.-.+.+++.-|.+.. .+|+..+..+.    ++|.+.|++. |+. +..|.+|.-++++..+    -
T Consensus       297 V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv----~YL~~~l~~~-GVp-i~~paGGHavfvda~~~lphi  370 (471)
T COG3033         297 VVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQV----QYLADGLEEA-GVP-IVQPAGGHAVFVDAGKFLPHI  370 (471)
T ss_pred             EeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHH----HHHHHHHHhc-CCe-eEecCCCceEEeehhhhcCCC
Confidence            1      123334445556655565432 46666665554    5667777776 787 4488888888876422    1


Q ss_pred             ccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--C-----------CCeEEEEee---CChhhHHHHHHHHHHHHHH
Q 014936          349 LLDDIIDDIDFCFKLAKEESVIILPGTAVG--L-----------KNWLRVTFA---VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       349 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~-----------~~~iRi~~~---~~~~~l~~~l~~l~~~~~~  407 (415)
                      +-+.. ....+..+|-++.||-..--..|.  .           -.-+|+++.   .+.+.++-.++.++++.+.
T Consensus       371 p~eqF-paqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~  444 (471)
T COG3033         371 PAEQF-PAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN  444 (471)
T ss_pred             ChhhC-cHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence            11111 466788888888999765433322  1           146999992   4788899998888877664

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.96  E-value=2.3e-08  Score=89.89  Aligned_cols=332  Identities=13%  Similarity=0.138  Sum_probs=186.2

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-----
Q 014936           57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-------PG-----  124 (415)
Q Consensus        57 ~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~-------~g-----  124 (415)
                      ..+-+.+.++.+. ..|...+...-.++.+-....+-.|+....|.|+--.|+.+.+++..-+--+       .|     
T Consensus       118 ag~wlT~t~Ntn~-~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p  196 (510)
T KOG0629|consen  118 AGEWLTSTANTNM-FTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALP  196 (510)
T ss_pred             HHHHHHhccCCCC-ceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCC
Confidence            3344444444433 4777666665666666666655566666656666666666666655544211       12     


Q ss_pred             C-EEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCCC-ce-EE-EecCC---CCccccCCCHHH
Q 014936          125 A-NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN-TV-AL-VIINP---GNPCGNVYSYQH  194 (415)
Q Consensus       125 d-~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~v-~i~~p---~nptG~~~~~~~  194 (415)
                      + ...+++.+|+++..++..+|+   .+..++.+  ...++.+++||+.+-+. .+ .+ ++++.   ...-|..   ++
T Consensus       197 ~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---Dd  271 (510)
T KOG0629|consen  197 PLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DD  271 (510)
T ss_pred             cEEEEecccchhhHHHHHHHhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---Cc
Confidence            2 345668899999999999984   45556554  33568999999877442 11 11 33333   4455676   89


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      +..|+++|++|++|+++|.+.++...-..... -+......+  -+.++.+|. ....+.++..+.+.+.       +.+
T Consensus       272 L~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~-~gaplqCsa~l~r~~g-------ll~  341 (510)
T KOG0629|consen  272 LNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKL-MGAPLQCSAFLTREEG-------LLQ  341 (510)
T ss_pred             HHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccC--ceeecHHHh-hcCcchhhHHHHHHHH-------HHH
Confidence            99999999999999999999987443222211 122221111  345678998 4566777776654322       222


Q ss_pred             HHHhhcc-----------cc-CCchhHHHH-------HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          274 RMKKYFD-----------IL-GDPATFIQA-------AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       274 ~~~~~~~-----------~~-~~~~~~~~~-------a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      +-+....           .+ -+..-..|-       -+--.++......+++..+++-++++++.+.|++.+++..+..
T Consensus       342 ~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~  421 (510)
T KOG0629|consen  342 RCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFE  421 (510)
T ss_pred             hhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhc
Confidence            2111100           00 011111110       0111222223466888999999999999999998767553433


Q ss_pred             --CCCceEEEEecCccccCCCCCHHH-----------HHHHHHhhcCeEEEcCCCCC-CCCeEEEEee---CChhhHHHH
Q 014936          335 --PEGSMAVMLKLNLSLLDDIIDDID-----------FCFKLAKEESVIILPGTAVG-LKNWLRVTFA---VDPYSLEEC  397 (415)
Q Consensus       335 --p~~g~~~~~~l~~~~~~~~~~~~~-----------~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~---~~~~~l~~~  397 (415)
                        |+..++.+-..|.. ..+++.+.+           +-..++ +.|-....-...+ .++++|+.++   .+.++++-+
T Consensus       422 ~~pe~~nv~fw~vp~~-lR~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dfl  499 (510)
T KOG0629|consen  422 LEPEHVNVCFWYVPPS-LRGWQENPERDSRLVKVAPKIKERMM-KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFL  499 (510)
T ss_pred             CCCceEEEeeccCchH-hccCcccchhhhHHHhhCcHHHHHHH-hccceeeEecccccccchhheecccchhhhhhHHHH
Confidence              55444433223321 112222111           112222 2344433222222 2578999884   467899999


Q ss_pred             HHHHHHHHH
Q 014936          398 LDRIKSFYQ  406 (415)
Q Consensus       398 l~~l~~~~~  406 (415)
                      ++.|..+-+
T Consensus       500 ldEIerlgq  508 (510)
T KOG0629|consen  500 LDEIERLGQ  508 (510)
T ss_pred             HHHHHHhcc
Confidence            998887643

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=98.88  E-value=2.8e-07  Score=81.12  Aligned_cols=215  Identities=17%  Similarity=0.108  Sum_probs=123.1

Q ss_pred             hhHHHhhcCC-----CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC-cccccccCCC
Q 014936          163 LDDIESLADQ-----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGST  234 (415)
Q Consensus       163 ~~~l~~~~~~-----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~  234 (415)
                      +++++.++.+     .+.+.+|+.| +...|- ..|++..++|.++|++|++.+|+||++.+..-+|.- ......++..
T Consensus       255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P  334 (484)
T KOG1405|consen  255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP  334 (484)
T ss_pred             HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence            5556655532     4677788899 555554 478899999999999999999999999886655431 0111222222


Q ss_pred             CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ  314 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  314 (415)
                         .-+-+|||-| ..|   ||..-.+  ...     -+..+.+.  ++...|.-...+..+++...   -+.+....+.
T Consensus       335 ---pD~vTFSKK~-q~g---Gffh~~~--frp-----n~pYrifN--TWmGdP~k~lll~~vv~~I~---~~~Ll~n~~~  395 (484)
T KOG1405|consen  335 ---PDVVTFSKKF-QTG---GFFHDEE--FRP-----NEPYRIFN--TWMGDPSKNLLLEEVVQEIK---REDLLNNVAH  395 (484)
T ss_pred             ---ccceehhhhh-hcC---ccccCcc--cCC-----CchHHHhh--hhcCChHHHHHHHHHHHHHh---HHHHHHHHHH
Confidence               2233799986 444   5654321  111     11222222  34444444444444544322   2233444444


Q ss_pred             HHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--
Q 014936          315 SVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--  388 (415)
Q Consensus       315 ~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--  388 (415)
                      .-+.+.+.|.+    .|+.- -.....|-|+..+++..      ...+.+...++-+||.+..   |+ ...||+..+  
T Consensus       396 vG~~l~~gL~~Lq~~~p~~~-~~~RGrGTF~a~d~ps~------~~Rdk~i~~~~~nGv~~GG---Cg-~~siRfRPsLv  464 (484)
T KOG1405|consen  396 VGKALLKGLLELQAKYPGKI-NNLRGRGTFIAWDCPSG------SIRDKLILIARLNGVNLGG---CG-DKSIRFRPSLV  464 (484)
T ss_pred             HHHHHHHHHHHHHHhCchhh-hcccccceEEEEeCCCh------HHHHHHHHHHHHcCceecc---cc-cceeeecccee
Confidence            44555555543    45533 22344566777778753      2334444556778988743   23 355676664  


Q ss_pred             CChhhHHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~~  407 (415)
                      ..+...+-.++++.+.++.
T Consensus       465 f~~~Ha~i~l~~~~k~l~~  483 (484)
T KOG1405|consen  465 FRKHHADIFLDIFDKILAG  483 (484)
T ss_pred             ehhhhHHHHHHHHHHHhcc
Confidence            5677778888888877653

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.87  E-value=1.2e-05  Score=73.24  Aligned_cols=276  Identities=15%  Similarity=0.144  Sum_probs=157.1

Q ss_pred             CCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936           97 KLTPNDVFVTSGCTQAIDVAMALL---SRPGANILLPRPGFPIYELSAA----FRHIEVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus        97 ~~~~~~i~i~~g~~~al~~~~~~l---~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      +.+..+-=+.-++|.+=+++..+.   .++..+++++.-+|+.+.+.++    ..|.++..++.+       |++.+++.
T Consensus       134 Gm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~  206 (450)
T COG0403         134 GLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA  206 (450)
T ss_pred             CCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc
Confidence            344444444455555545444443   3446899999999998877764    345666665542       67888887


Q ss_pred             cCCCceEEEecCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEc-cccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936          170 ADQNTVALVIINPGNPCG-NVYSYQHLQKLAETANKLKTLVIAD-EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW  247 (415)
Q Consensus       170 ~~~~~~~v~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (415)
                      .+..+.++++..|+. .| ..   +++++|.+.++++|.++++= +.-+...     ..+...++.+   |++++.... 
T Consensus       207 ~~~~~~gv~vQyP~~-~G~~~---~d~~~l~~~~h~~~al~~v~aDplaL~L-----L~pPGe~GAD---IvvG~~Qrf-  273 (450)
T COG0403         207 DDGDVFGVLVQYPNT-FGIVE---EDLRALIEAAHSAGALVIVAADPLALGL-----LKPPGEFGAD---IVVGSAQRF-  273 (450)
T ss_pred             cccCeEEEEEecCCC-CCccc---hhHHHHHHHHhhcCCEEEEEechhHhhc-----cCCccccCCc---eEEecCccc-
Confidence            334678889999984 56 44   77999999999999876642 1111111     1223344544   788876654 


Q ss_pred             CC----CCceEEEEEeeCCC-------------CCCChHHHH-------HHHHhhcccc-CCchh-HHHHHHHHhhCCCc
Q 014936          248 IV----PGWRLGWFVTTDPC-------------GMFRKPKVV-------ERMKKYFDIL-GDPAT-FIQAAVPSILQQPD  301 (415)
Q Consensus       248 ~~----~G~r~G~~~~~~~~-------------~~~~~~~~~-------~~~~~~~~~~-~~~~~-~~~~a~~~~l~~~~  301 (415)
                      |.    +|.-+||+.+.++-             ...+++.+.       +.+++.+.++ -+.+. +...++..++..+.
T Consensus       274 GvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hG  353 (450)
T COG0403         274 GVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHG  353 (450)
T ss_pred             CCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhC
Confidence            54    36778888875421             000111111       1222222222 22222 22223333333355


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKEIP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK  380 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~  380 (415)
                      .+.+++...+..+...++.+.|++.. +++ + ... .+|--+.+..+.    .....+..+. ...|+-+..-.    .
T Consensus       354 p~GLk~iA~r~~~~a~~la~~L~~~~~g~~-~-~~~-~fFdt~~v~~~~----~~~~~l~~~~-~~~G~~L~~~~----~  421 (450)
T COG0403         354 PQGLKEIAERIHRLAAYLAAGLKEIGAGVE-L-VFD-HFFDTFTVRVPE----EVAEALLAAA-IAGGINLRRVD----A  421 (450)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcCCceE-e-ccc-cceeeEEEecch----hHHHHHHHHH-HhcCCceeeec----C
Confidence            78899999999999999999999652 455 2 112 444333332110    0122222222 34466654322    2


Q ss_pred             CeEEEEe--eCChhhHHHHHHHHHHH
Q 014936          381 NWLRVTF--AVDPYSLEECLDRIKSF  404 (415)
Q Consensus       381 ~~iRi~~--~~~~~~l~~~l~~l~~~  404 (415)
                      ..+-+++  .+++++++.+++.+...
T Consensus       422 ~~~~ia~tEt~t~~~i~~l~~~~~~~  447 (450)
T COG0403         422 DTVLIALTETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             CceEEEeecccCHHHHHHHHHHHhhh
Confidence            4566666  35788999988887654

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.84  E-value=3.5e-09  Score=95.15  Aligned_cols=250  Identities=20%  Similarity=0.151  Sum_probs=50.4

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCc-----HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCE
Q 014936           52 HTTHVATEAVAEALLSEKFNGYAPTAGL-----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN  126 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~  126 (415)
                      +.++++.+++.+......-..|.-..|.     ..+.+.++...        ..+..+++++..+|+.+++.++. +|.+
T Consensus        17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt--------gAeaA~VvNnnaAAv~L~l~~la-~~~E   87 (367)
T PF03841_consen   17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT--------GAEAALVVNNNAAAVLLALNTLA-KGKE   87 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccccccccccccc-cccc
Confidence            3457777777766543221233222121     22333333332        46788888998999999988886 5677


Q ss_pred             EEEcCCCC------cchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc--cccCCCHHHHHHH
Q 014936          127 ILLPRPGF------PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP--CGNVYSYQHLQKL  198 (415)
Q Consensus       127 vi~~~p~y------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np--tG~~~~~~~l~~i  198 (415)
                      |++..-.-      +.+.+..+..|++++.+-...    .-.+++.++++.++|.+++.++++|-  .|..-+ -.++++
T Consensus        88 vIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el  162 (367)
T PF03841_consen   88 VIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEEL  162 (367)
T ss_dssp             ------------------------------------------------------------------------------HH
T ss_pred             ccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccc-ccHHHH
Confidence            77664322      224566777888888876421    34688999999999999999999774  343322 358889


Q ss_pred             HHHHhhcCcEEEEccccCCcc----cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          199 AETANKLKTLVIADEVYGHLV----FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       199 ~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      ++++++||+++++|-..+.+.    ++-...+.+...-...-.++++|-.|.++  |...|.+++.+        +++++
T Consensus       163 ~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gkk--------~lI~~  232 (367)
T PF03841_consen  163 AELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGKK--------ELIEK  232 (367)
T ss_dssp             HHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEEH--------HHHHH
T ss_pred             HHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeCH--------HHHHH
Confidence            999999999999998874432    11111222333322222377888899855  55689999876        78998


Q ss_pred             HHhhc-cccCCchhHHHHHHHHhhCCCcH-----------HHHHHHHHHHHHHHHHHHHHhhc
Q 014936          275 MKKYF-DILGDPATFIQAAVPSILQQPDE-----------VFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       275 ~~~~~-~~~~~~~~~~~~a~~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                      ++... ....-.......++.+.|+...+           ..+....+.++++.+.+...|+.
T Consensus       233 lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~  295 (367)
T PF03841_consen  233 LKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA  295 (367)
T ss_dssp             HHHHHHTTT-B--HHHHHHHHHHHHH-------------------------------------
T ss_pred             HhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence            87652 22344556666666655543211           22333445566666666666654

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.84  E-value=4.9e-07  Score=82.19  Aligned_cols=289  Identities=13%  Similarity=0.138  Sum_probs=152.0

Q ss_pred             CcEEEeCChH-HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC-CCCChhHHHhhcCC---C
Q 014936          101 NDVFVTSGCT-QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIESLADQ---N  173 (415)
Q Consensus       101 ~~i~i~~g~~-~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~~---~  173 (415)
                      ...++++-+| -++.+.+.++.  ..++.|+.+.-.+.+...++...|.+++.++...+.+ ...|++.+++.+++   .
T Consensus        75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~  154 (389)
T PF05889_consen   75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGAD  154 (389)
T ss_dssp             CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGG
T ss_pred             cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCC
Confidence            4455555543 34444455553  4678999999888888888999999999988543333 23456777766643   4


Q ss_pred             ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC-CCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      ..+.++++++.--+...  +++++|+++|+++|++.|+..+|+.-...- +........+--  .+++.|+-|.|..|- 
T Consensus       155 ~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRv--da~vqS~dkNF~VPv-  229 (389)
T PF05889_consen  155 NILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRV--DAFVQSTDKNFMVPV-  229 (389)
T ss_dssp             GEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTC--SEEEEEHHHHHCEES-
T ss_pred             CeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCc--ceeeeecCCCEEecC-
Confidence            56777877653333331  459999999999999999999998511000 000000011111  167888999986542 


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----CCC
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----IPC  328 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~  328 (415)
                       .|.+++..      +|..+..+...+.--...++ .......+|.-+ ...+........+...++.+.|++    . +
T Consensus       230 -Ggai~As~------~~~~i~~vs~~YpGRas~sp-~ld~~itLl~LG-~~g~~~ll~~r~~~f~~l~erl~~~aee~-~  299 (389)
T PF05889_consen  230 -GGAIMASF------DPSGILAVSKEYPGRASASP-SLDLFITLLSLG-CTGYGALLKERKASFPYLKERLKKWAEEV-G  299 (389)
T ss_dssp             -SHEEEEES------SHHHHHHHHHTSHSHBTSHH-HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             -CCcEEEec------CHHHHHHHHHHhhhhhhccc-chHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence             14444433      34677777665431122222 223333333322 223334444444444444444432    3 2


Q ss_pred             CcCCCCCCCceEEEEecCccccCCCC-CHHHHHHHHHhhcCeE----EEcCCCCC-------CCCeEEEEe--eCChhhH
Q 014936          329 ISCPHKPEGSMAVMLKLNLSLLDDII-DDIDFCFKLAKEESVI----ILPGTAVG-------LKNWLRVTF--AVDPYSL  394 (415)
Q Consensus       329 ~~~~~~p~~g~~~~~~l~~~~~~~~~-~~~~~~~~ll~~~gi~----v~~g~~~~-------~~~~iRi~~--~~~~~~l  394 (415)
                      -.....|....-+.+.++..  .... ...-++-..|...||.    +.|+....       ...++-++.  +.++||+
T Consensus       300 e~ll~~p~N~is~a~tl~~l--~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eev  377 (389)
T PF05889_consen  300 ERLLETPRNHISMAFTLDTL--YEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEV  377 (389)
T ss_dssp             EEBSSSTT-SSEEEEE-TTC--CTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHH
T ss_pred             hhhcCCCCCCeeEEEECccc--hhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHH
Confidence            22122455554455555421  1111 2344556666776764    23322211       136888855  6899999


Q ss_pred             HHHHHHHHHHHH
Q 014936          395 EECLDRIKSFYQ  406 (415)
Q Consensus       395 ~~~l~~l~~~~~  406 (415)
                      +.++++|++.++
T Consensus       378 d~~v~rL~k~i~  389 (389)
T PF05889_consen  378 DYFVKRLDKIIK  389 (389)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC
Confidence            999999998874

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.76  E-value=5.9e-07  Score=77.41  Aligned_cols=174  Identities=21%  Similarity=0.256  Sum_probs=114.6

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCC-CCcchHH----------H
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP-GFPIYEL----------S  140 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p-~y~~~~~----------~  140 (415)
                      +|.+ -|-.-|.+..|+-++.    ....-+.-+.+ +|.|+..++..+++|||+.+...- -|....+          .
T Consensus        61 GydD-~GRdtLe~vyA~vf~a----E~a~VRpq~is-GTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gS  134 (416)
T COG4100          61 GYDD-LGRDTLERVYAQVFGA----EAALVRPQIIS-GTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGS  134 (416)
T ss_pred             Cccc-cchhHHHHHHHHHhcc----ccceeeeeeec-chhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCccc
Confidence            3444 5767777777777632    11112334444 589999999999999999875432 2333332          2


Q ss_pred             HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC-CCccccCCCHHHHHHHHHHHhhc--CcEEEEccccCC
Q 014936          141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGH  217 (415)
Q Consensus       141 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~  217 (415)
                      ++.+|+....+++.+  +.++|.+.++..+++++|++.|... ....--.++.+++++++++.++.  |+++++|.+|+.
T Consensus       135 L~dfgi~Y~~v~Lt~--~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE  212 (416)
T COG4100         135 LKDFGIKYKAVPLTA--DGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE  212 (416)
T ss_pred             HHHhCcceeeccccc--CCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh
Confidence            445667777777754  3469999999999999999887644 22222237779999999999875  689999999999


Q ss_pred             cccCCCCcccccccCCCCCeEEEccCccccCCCCc--eEEEEEeeC
Q 014936          218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW--RLGWFVTTD  261 (415)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~~~~~~  261 (415)
                      |+-... +.   ..+.+   +..+|+-|. ...|+  -.||+.++.
T Consensus       213 FvE~~E-Pt---~vGaD---liAGSLIKN-pGGgiaktGGYiaGk~  250 (416)
T COG4100         213 FVEEKE-PT---HVGAD---LIAGSLIKN-PGGGIAKTGGYIAGKA  250 (416)
T ss_pred             hhhccC-cc---ccchh---hhccceeeC-CCCceeeccceeechH
Confidence            874322 11   22332   677888887 34443  236777644

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=98.75  E-value=4.1e-06  Score=74.84  Aligned_cols=331  Identities=15%  Similarity=0.104  Sum_probs=175.8

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      +.+.||+.|-      ...++++.+..++.+.+-...+++      ...-...+-+...+.+++.++++-+-+-+++-.|
T Consensus         4 ~~~~nFsaGP------a~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG   77 (365)
T COG1932           4 PRVYNFSAGP------AALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG   77 (365)
T ss_pred             CCCCCCCCCc------ccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence            4468899884      344566666666654431110111      1111233333333444444454433334455666


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHHhCCCeEEEeecc-CCCC--CCCChhHHHhhcCCCceEEEecCCCC
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAFRHIEVRHFDLL-PDKG--WEVDLDDIESLADQNTVALVIINPGN  184 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~-~~~~~~~g~~~~~~~~~-~~~~--~~~~~~~l~~~~~~~~~~v~i~~p~n  184 (415)
                      +|....++...|..+...-.+..-.|... ...++..+..+...... ...+  .-++++.+.  +..+..-|.+|+-..
T Consensus        78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeT  155 (365)
T COG1932          78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNET  155 (365)
T ss_pred             cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCc
Confidence            79999999999886543212333334321 23344445322211111 1121  122333322  222322255555455


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  264 (415)
                      -+|+.++.  ...+.     .+.++|.|-....+.    ....+..++     ++-.+.-|.+|..|  ++.++.++   
T Consensus       156 i~Gv~v~~--~p~~~-----~~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr~---  214 (365)
T COG1932         156 ISGVEVPE--LPDIG-----SDGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVRP---  214 (365)
T ss_pred             ccceEccC--CCCCC-----CCceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEcH---
Confidence            67877652  11111     127889998876643    233343443     55567899999999  88888765   


Q ss_pred             CCChHHHHHHHHhh--------------ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936          265 MFRKPKVVERMKKY--------------FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCI  329 (415)
Q Consensus       265 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~  329 (415)
                           ++.++.+..              ..+..+++....+.+...++-.. ...++...++-+++.+.+.+.+++.+-.
T Consensus       215 -----~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy  289 (365)
T COG1932         215 -----DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFY  289 (365)
T ss_pred             -----HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence                 444444321              11234555555555554443211 2446777788888889999999876322


Q ss_pred             cCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936          330 SCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       330 ~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~  405 (415)
                      .....+.  .-+-+.+++...     .-+..++..+ +++|+..--|  ....+.+|+++  +.+.++++.+++-++.+.
T Consensus       290 ~~~v~~~~RS~mnV~f~~~~~-----~ld~~fv~ea-e~~gl~~lkG--hr~vgGmRasiynA~~~e~veaL~~fm~~f~  361 (365)
T COG1932         290 RNLVAKANRSRMNVTFTLVDA-----ELDKGFVAEA-EAAGLIYLKG--HRSVGGLRASIYNAVPLEDVEALTDFMDWFE  361 (365)
T ss_pred             ccccchhhccceeEEEEcCcH-----HHHHHHHHHH-HHcCCceecc--ccCCCceeeeeecCCCHHHHHHHHHHHHHHH
Confidence            2111221  223344445432     1245666665 4557766556  23356699999  568899999999888877


Q ss_pred             HH
Q 014936          406 QR  407 (415)
Q Consensus       406 ~~  407 (415)
                      ++
T Consensus       362 ~~  363 (365)
T COG1932         362 ET  363 (365)
T ss_pred             Hh
Confidence            65

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.60  E-value=5.1e-05  Score=77.31  Aligned_cols=269  Identities=13%  Similarity=0.116  Sum_probs=153.3

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHH---HHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeec
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ---AIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL  153 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~---al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~  153 (415)
                      ++...|++..      +.+..+--+.-++|+   |+.++.+.-.++..+|+++.-.|+.+...++    ..|++++.   
T Consensus       128 e~Qtmi~~Lt------Gm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~---  198 (954)
T PRK12566        128 NFQQMTIDLT------GLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV---  198 (954)
T ss_pred             HHHHHHHHHh------CchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE---
Confidence            3444455544      334334334445444   4444443322234689999999988776543    44566553   


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                                +++++.++.++.++++.+|+. .|.+   +++++|.++++++|.+++ +.+.- +...  ...+...++.
T Consensus       199 ----------~~~~~~~~~~~~~v~vq~P~~-~G~i---~d~~~i~~~~h~~gal~~-~~~d~-laL~--ll~~Pge~GA  260 (954)
T PRK12566        199 ----------DAVDNLAAHAVFGALLQYPDT-HGEI---RDLRPLIDQLHGQQALAC-VAADL-LSLL--VLTPPGELGA  260 (954)
T ss_pred             ----------cchhhcCCCCEEEEEEECCCC-ceEE---ccHHHHHHHHHHcCCEEE-EEeCH-HHHh--CCCChhhcCC
Confidence                      223334445677888889975 7888   789999999999998765 32221 1111  1112234444


Q ss_pred             CCCeEEEccCccccCC----CCceEEEEEeeCCCCCCChHHHHHH----------------------------HHhhccc
Q 014936          234 TVPILTLGSLSKRWIV----PGWRLGWFVTTDPCGMFRKPKVVER----------------------------MKKYFDI  281 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~  281 (415)
                      +   |++++ ++.||.    +|.-.|++.+.+        ++.+.                            +++.+..
T Consensus       261 D---I~vG~-~Q~fGvp~~~GGP~ag~~a~~~--------~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAt  328 (954)
T PRK12566        261 D---VVLGS-TQRFGVPMGYGGPHAAYFACRD--------DYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKAN  328 (954)
T ss_pred             c---EEeeC-CCcCCCCCCCCCCCeeeeeehH--------HHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhcccc
Confidence            4   66664 343443    355688888754        22222                            2222222


Q ss_pred             cC-CchhH-HHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHH
Q 014936          282 LG-DPATF-IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDF  359 (415)
Q Consensus       282 ~~-~~~~~-~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~  359 (415)
                      +. +.+.. ...++..++..+..+.+++..++..+++.++.+.|.+. |++ +  ....+|--+.+...     ....++
T Consensus       329 SNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~-~--~~~~fF~~~~v~~~-----~~~~~~  399 (954)
T PRK12566        329 SNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-GIK-R--LNRHFFDTLTLEVG-----GAQAAI  399 (954)
T ss_pred             chhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCc-c--ccCCccceEEEEcc-----CCHHHH
Confidence            22 22222 22222223333456788999999999999999999984 887 3  22344543333321     023444


Q ss_pred             HHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936          360 CFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK  402 (415)
Q Consensus       360 ~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~  402 (415)
                      .... .+.||-++--.    ++.+.||+  .++.++++.++..+.
T Consensus       400 ~~~a-~~~~~n~r~~~----~~~~~~s~de~~~~~~~~~~~~~f~  439 (954)
T PRK12566        400 IESA-EAARINLRILG----RGRLGVSLDETCDEATVARLFDIFL  439 (954)
T ss_pred             HHHH-HHCCCeeEEeC----CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence            4444 45688776432    36788888  467899999998884

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=97.95  E-value=0.0057  Score=53.61  Aligned_cols=327  Identities=13%  Similarity=0.064  Sum_probs=174.1

Q ss_pred             CcHHHHHHHHHHHhc-CCCCCC-------CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCC
Q 014936           53 TTHVATEAVAEALLS-EKFNGY-------APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG  124 (415)
Q Consensus        53 ~~~~~~~a~~~~~~~-~~~~~y-------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~g  124 (415)
                      .++..++.+++-++. .....|       |-..+....-..++...      +...++|.++++-|..+..++.++.+|-
T Consensus        79 mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~EvavmNsLTvNlh~Ll~sFyKPT  152 (465)
T KOG3846|consen   79 MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAVMNSLTVNLHSLLISFYKPT  152 (465)
T ss_pred             CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhhHhhhhhHHHHHHHHhcCCc
Confidence            356666667666553 011122       22233445555666665      4577899999999999999999998765


Q ss_pred             C---EEEEcCCCCcc----hHHHHHhCCCeEEE--eeccC-CCCCCCChhHHHhhcCCC--c-eEEEecCCCCccccCCC
Q 014936          125 A---NILLPRPGFPI----YELSAAFRHIEVRH--FDLLP-DKGWEVDLDDIESLADQN--T-VALVIINPGNPCGNVYS  191 (415)
Q Consensus       125 d---~vi~~~p~y~~----~~~~~~~~g~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~--~-~~v~i~~p~nptG~~~~  191 (415)
                      .   +|+++.-.|++    +...++..|..+..  +...| ++...+..+++.+.++.+  . .+|.++..+.-||+.++
T Consensus       153 ekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fd  232 (465)
T KOG3846|consen  153 EKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFD  232 (465)
T ss_pred             chhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccc
Confidence            3   68877666654    55566777876532  22222 233345677776666543  2 33455666889999976


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                         +.+|-..-...|+++=.|-+|+.    |.-+..+..++.+   ..++.--|....+.-.+|.+.+.........|.+
T Consensus       233 ---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHdWgVD---FACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl  302 (465)
T KOG3846|consen  233 ---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHDWGVD---FACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRL  302 (465)
T ss_pred             ---hhhhhhcccCCCcEechhhhhhh----cCCceEEeecCCc---eEEEeeecccccCCCccceeeeehhhhcchhhHH
Confidence               45555444567888889999987    4444444444443   5666666764322222444444332211111222


Q ss_pred             HHHHHhh----------cc--------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC-----
Q 014936          272 VERMKKY----------FD--------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC-----  328 (415)
Q Consensus       272 ~~~~~~~----------~~--------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----  328 (415)
                      ...+..-          ..        ..++++.....++...|+.-.+..+++.+++---...++...++...+     
T Consensus       303 ~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~  382 (465)
T KOG3846|consen  303 AGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPL  382 (465)
T ss_pred             hhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchh
Confidence            2222110          00        012333333344444443211111233332222223333333332111     


Q ss_pred             ------CcCCCCC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHH
Q 014936          329 ------ISCPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLE  395 (415)
Q Consensus       329 ------~~~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~  395 (415)
                            +. +..|    +.|.-+.+.+..       +...++.+| .+.|+.+--    ..++.||+...   .+-.++.
T Consensus       383 rt~Kl~~~-IiTP~~~~erGcQLsl~Fss-------p~~~vfqeL-~krGv~~Dk----R~PNvIRvAPvpLYN~f~Dvy  449 (465)
T KOG3846|consen  383 RTEKLFFT-IITPTSTDERGCQLSLYFSS-------PTPKVFQEL-HKRGVIGDK----RRPNVIRVAPVPLYNTFSDVY  449 (465)
T ss_pred             hhcceeEE-EeCCcccccccceEEEEeCC-------CchHHHHHH-HHcCeeccc----cCCCceEeecchhhccHHHHH
Confidence                  22 1122    234445555542       223445555 667987532    22688999984   4668899


Q ss_pred             HHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRH  408 (415)
Q Consensus       396 ~~l~~l~~~~~~~  408 (415)
                      .+++.|.+++...
T Consensus       450 ~f~n~L~e~~d~~  462 (465)
T KOG3846|consen  450 IFVNALNEAMDKL  462 (465)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999988887654

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=97.89  E-value=0.0031  Score=60.68  Aligned_cols=309  Identities=14%  Similarity=0.099  Sum_probs=172.8

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh-----HHHHHHHHHHh-cCCC----CEEEEcCCCCcchHHHHHhCCC
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC-----TQAIDVAMALL-SRPG----ANILLPRPGFPIYELSAAFRHI  146 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~-----~~al~~~~~~l-~~~g----d~vi~~~p~y~~~~~~~~~~g~  146 (415)
                      .|+.++-+.+.+++..-    ..-|.+.+.+++     ..++. ++++. ..+|    ...+++...|......++..|.
T Consensus       578 qGY~~lf~~Le~~Lc~i----TG~D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm  652 (1001)
T KOG2040|consen  578 QGYQQLFTELEKDLCEI----TGFDSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM  652 (1001)
T ss_pred             hhHHHHHHHHHHHhhee----ecccceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence            56777777777776431    234666664442     23333 34443 3334    2457788888888889999999


Q ss_pred             eEEEeeccCCCCCCCChhHHHhhcCCC---ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC
Q 014936          147 EVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK  223 (415)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~  223 (415)
                      +++.+..+.  +..+|..+|+...+.+   -.++.++-|+. .|+.  .+.+.+++++.++||--+..|.+.-....+-.
T Consensus       653 kvvpV~~~~--~G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMNAqVGlc  727 (1001)
T KOG2040|consen  653 KVVPVGCDA--NGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMNAQVGLC  727 (1001)
T ss_pred             EEEEeeccC--CCCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCccceeccc
Confidence            999988754  3458999998766543   35677777764 2333  25689999999999999999988644322211


Q ss_pred             CcccccccCCCCCeEEEccCccccCC----CCceEEEEEeeCCC--CCCChHHHHHHHHhh--ccc---c--CCchh---
Q 014936          224 PFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLGWFVTTDPC--GMFRKPKVVERMKKY--FDI---L--GDPAT---  287 (415)
Q Consensus       224 ~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~--~~~---~--~~~~~---  287 (415)
                      .+   ..++.+   |.=-.++|+|..    +|..+|-+.+.+.-  ++- ...++...+..  ...   +  ...+.   
T Consensus       728 ~p---Gd~GaD---V~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP-~HpVvs~~~~~~~~~~gsVsaaP~Gsa~IL  800 (1001)
T KOG2040|consen  728 RP---GDIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSPGRPEDTSPVGSVSAAPWGSALIL  800 (1001)
T ss_pred             CC---cccccc---ceeecccceeeecCCCCCCCCCccchhhhccccCC-CCCccCCCCCCCCCCccceeccCCCcceee
Confidence            11   222322   333356777743    34446666553210  000 00011100000  000   0  00011   


Q ss_pred             HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC--ceEEEEecCcccc-CCCCCHHHHHHHHH
Q 014936          288 FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG--SMAVMLKLNLSLL-DDIIDDIDFCFKLA  364 (415)
Q Consensus       288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~l~~~~~-~~~~~~~~~~~~ll  364 (415)
                      +..++..+++..   ..+.+..+...-+.+++.++|+..=.+- +..+.+  +.-+.+++..-+- .++ ...++.++| 
T Consensus       801 pISwaYikmMG~---~GL~~as~~AiLNaNYMakRLe~hYkil-~~~~~~~vaHEFIlD~r~fK~~agi-eavDvAKRL-  874 (1001)
T KOG2040|consen  801 PISWAYIKMMGS---GGLKDASKIAILNANYMAKRLESHYKIL-FRGENGLVAHEFILDLRPFKKTAGI-EAVDVAKRL-  874 (1001)
T ss_pred             hhHHHHHHHhcc---cccchhhHHHhhhhHHHHHHHhhcccee-EecCCcceeeeeeeechhhccccCC-cHHHHHHHH-
Confidence            122333334332   4455666666678889999998631222 212222  2223444433222 223 466777766 


Q ss_pred             hhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHH
Q 014936          365 KEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       365 ~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      ..+|... |--.+...+.+-|-.  +-+.++++++++++-.+-++.+
T Consensus       875 ~DYgFHa-PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~  920 (1001)
T KOG2040|consen  875 MDYGFHA-PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIA  920 (1001)
T ss_pred             HhccCCC-CccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence            6788874 333444567888877  4567899999999887766644

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=97.78  E-value=0.0037  Score=54.13  Aligned_cols=333  Identities=14%  Similarity=0.120  Sum_probs=173.6

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++.++||+.|-..     .+.+-+.++-++.++-... +-+      .......+.+.-...+.+.+.++-+-+-+++..
T Consensus         5 ~~~vvnFaaGPAk-----lp~~VL~e~qkdl~n~~g~-GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QG   78 (370)
T KOG2790|consen    5 PERVVNFAAGPAK-----LPESVLLEAQKDLLNFNGS-GISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQG   78 (370)
T ss_pred             ccceeecCCCccc-----CCHHHHHHHHHHhhccCCC-cceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeC
Confidence            5678999999532     2345455544444432110 000      011122333333333333344443334455666


Q ss_pred             ChHHHHHHHHHHhc--CCC---CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC-CCCCChhHHHhhcCCCceEEEecC
Q 014936          108 GCTQAIDVAMALLS--RPG---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLADQNTVALVIIN  181 (415)
Q Consensus       108 g~~~al~~~~~~l~--~~g---d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~i~~  181 (415)
                      |+|..+.++...|.  +.|   |-|++-.++--.+.++.+......+..+..... +--+|.+.++.  +++.+.+.+|.
T Consensus        79 GGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCa  156 (370)
T KOG2790|consen   79 GGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCA  156 (370)
T ss_pred             CCcccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEec
Confidence            77877777776665  344   566665555545444444333334443332221 01134444443  34455677776


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      -....|+-++.-.      +-..++.++|.|-+.-++.    .+..+..+     -+++.+..|.+|.+|  +-.++.++
T Consensus       157 NETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvsk~-----gvi~aGAQKN~G~aG--~Tvvivr~  219 (370)
T KOG2790|consen  157 NETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVSKF-----GVIFAGAQKNVGPAG--VTVVIVRK  219 (370)
T ss_pred             CceeeceecCCCC------CCCCCCceEEEecccchhc----CCccchhc-----ceEEeccccccCccc--cEEEEEeh
Confidence            5555676654322      2235688888887765533    22223223     367778899988888  44555544


Q ss_pred             CCCCCChHHHHHHHHhh-------------ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          262 PCGMFRKPKVVERMKKY-------------FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                              +++......             .....+++..+.++..-.++... ...+....+.-.+..+.+.+.+.+..
T Consensus       220 --------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~  291 (370)
T KOG2790|consen  220 --------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSN  291 (370)
T ss_pred             --------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence                    233222110             11123444444443333332211 13456666666778888999998765


Q ss_pred             CCcC-CCCCCC--ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936          328 CISC-PHKPEG--SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK  402 (415)
Q Consensus       328 ~~~~-~~~p~~--g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~  402 (415)
                      |+.. ...|..  -+-+.+++.+.     +-+.+|+....+++=|.+. |.  ..-+.+|-|+  +.+-++.+.+++-++
T Consensus       292 gfy~cpVe~~~RS~MNV~Fri~~d-----~Le~eFLkeA~~~~mv~LK-Gh--RSVGGiRASlYNAisv~~~q~L~~~m~  363 (370)
T KOG2790|consen  292 GFYRCPVEPSVRSRMNVPFRIEKD-----ELEAEFLKEAAKEHMVQLK-GH--RSVGGIRASLYNAISVEEVQKLAAFMK  363 (370)
T ss_pred             CeEEcccchhhhhhcccceeecch-----HHHHHHHHHHHHhhhhccc-cc--cccccchhhhhccccHHHHHHHHHHHH
Confidence            6542 222322  23344555432     2356777776665444443 22  2357899999  678889898888888


Q ss_pred             HHHHH
Q 014936          403 SFYQR  407 (415)
Q Consensus       403 ~~~~~  407 (415)
                      ++.+.
T Consensus       364 ~F~k~  368 (370)
T KOG2790|consen  364 EFQKK  368 (370)
T ss_pred             HHHHh
Confidence            77764

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=97.60  E-value=0.0006  Score=58.20  Aligned_cols=302  Identities=15%  Similarity=0.167  Sum_probs=145.9

Q ss_pred             CCCCCCCcEEEeCChHHHHHHHHHHhc--CCCC-EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC-CCCChhHHHhhc
Q 014936           95 PYKLTPNDVFVTSGCTQAIDVAMALLS--RPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIESLA  170 (415)
Q Consensus        95 ~~~~~~~~i~i~~g~~~al~~~~~~l~--~~gd-~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~  170 (415)
                      |...-..++++.-.+...+.+.+..+.  +|-. .|+-..-.--+.....-..|.+++.+.-..+.+ -.-|++.++..+
T Consensus        71 glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~i  150 (432)
T KOG3843|consen   71 GLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAII  150 (432)
T ss_pred             hhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHH
Confidence            333334455544334344455555554  3333 333332222233344455688776665433322 334777777776


Q ss_pred             CCCceEEEec-CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCe-EEEccCccccC
Q 014936          171 DQNTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-LTLGSLSKRWI  248 (415)
Q Consensus       171 ~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~-i~~~s~sK~~~  248 (415)
                      ++...-.++| +.....=..-+++.+++|+.+|..|+++-++..+|+.-.-.  -...++.-..-.++ .++.|+-|.|.
T Consensus       151 ee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee--~i~~iaa~~~~grida~vqsldknf~  228 (432)
T KOG3843|consen  151 EELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE--CIHKIAAAAECGRIDAFVQSLDKNFM  228 (432)
T ss_pred             HHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHH--HHHHHHHHhhhccHHHHHHHhhhcce
Confidence            5532221222 21111111224578999999999999999999999752210  00001111111111 45678999987


Q ss_pred             CCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcH---HHHHHHHHHHHHHHHHHHHHhhc
Q 014936          249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDE---VFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                      .|=  .|.+++.-      +..+++.+.+... ....+.++...+..+|..+..   +.+.+..+.....++.+.+.-+.
T Consensus       229 vpv--ggaiia~f------k~n~iq~iak~yp-grasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~  299 (432)
T KOG3843|consen  229 VPV--GGAIIAAF------KDNFIQEIAKMYP-GRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEA  299 (432)
T ss_pred             eec--chhHhhHh------HHHHHHHHHHhCC-CccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            652  13444311      1135566655432 112223344444445544332   22334444444444444444433


Q ss_pred             CCCCcCCCCCCCceEEEEec---CccccCCCCCHHHHHHHHHhhcCeE---EEcCCCC------------CC------CC
Q 014936          326 IPCISCPHKPEGSMAVMLKL---NLSLLDDIIDDIDFCFKLAKEESVI---ILPGTAV------------GL------KN  381 (415)
Q Consensus       326 ~~~~~~~~~p~~g~~~~~~l---~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~------------~~------~~  381 (415)
                      +.. ..+..|+...-....+   ++.+.    ....++-.+|..+||.   |+|.+..            +.      .+
T Consensus       300 ~~e-~l~~~p~n~is~amtl~ti~~~k~----kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~  374 (432)
T KOG3843|consen  300 IGE-CLLETPENEISLAMTLKTIDEAKD----KAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCA  374 (432)
T ss_pred             hhh-hhhcCCCchhhhhhhhccCChHHh----hHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCchh
Confidence            321 1133455543332223   22111    1233445555555653   4443221            11      12


Q ss_pred             eEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          382 WLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       382 ~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      ++-+.+  +.++.++++.+++|...++++++++
T Consensus       375 yln~a~aigm~~hdld~~~~rl~~~~a~~~ke~  407 (432)
T KOG3843|consen  375 YLNAACAIGMKDHDLDEFFNRLDRCLAAFRKEL  407 (432)
T ss_pred             HhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHHH
Confidence            444444  4678899999999999999988875

>PLN02672 methionine S-methyltransferase

Probab=97.12  E-value=0.021  Score=60.14  Aligned_cols=218  Identities=15%  Similarity=0.108  Sum_probs=129.8

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc------CCCCEEEEc
Q 014936           57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS------RPGANILLP  130 (415)
Q Consensus        57 ~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~------~~gd~vi~~  130 (415)
                      ....+...+....+..|.++.|...+|..||.|++.+.++++++++|++.++-..|++.+++.+.      +.+.+-.++
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (1082)
T PLN02672        406 FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP  485 (1082)
T ss_pred             HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC
Confidence            34456667777777899999999999999999999999999999999999999999988887753      333221111


Q ss_pred             CCCCcchHHHHHhCC--------CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936          131 RPGFPIYELSAAFRH--------IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA  202 (415)
Q Consensus       131 ~p~y~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~  202 (415)
                          ..|...+...|        ..+..+......+   -+-+|.+.+  +++.|+..-...   -..+-...+.|.+.+
T Consensus       486 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~  553 (1082)
T PLN02672        486 ----KKWLTSLAIENATSDSKSDDVITVIEAPRQSD---LVIELIKKL--KPQVVVTGMADF---EMRTSTAFEHLLNVT  553 (1082)
T ss_pred             ----HHHHhHhhhhcccccCccCCeEEEEeCCCcch---HHHHHHHhC--CCeEEEEeccch---hhhhHHHHHHHHHHH
Confidence                11222222222        2222222111111   122333333  344444333322   223336789999999


Q ss_pred             hhcCcEEEEccccCCcccC-CCCccccccc---CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh
Q 014936          203 NKLKTLVIADEVYGHLVFG-DKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (415)
Q Consensus       203 ~~~~~~li~De~~~~~~~~-~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~  278 (415)
                      ++-|.+++.|..-.+-.-. ......+..+   ....+..++.++-|.-..+.+-+.+++.-++       .+...+...
T Consensus       554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  626 (1082)
T PLN02672        554 AEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENE-------AVLKALSKT  626 (1082)
T ss_pred             HhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcH-------HHHHHHHHH
Confidence            9999999999875432211 1111112222   2223445666788886779999999997542       355666554


Q ss_pred             cc-ccCCchhHHHHHH
Q 014936          279 FD-ILGDPATFIQAAV  293 (415)
Q Consensus       279 ~~-~~~~~~~~~~~a~  293 (415)
                      .. ..+..+..+|.-.
T Consensus       627 ~~~~~~~~~~~~~~~~  642 (1082)
T PLN02672        627 GEVLEGRTAIISQFYY  642 (1082)
T ss_pred             HHhhccchHHHHHHHH
Confidence            32 2344555555433

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=95.45  E-value=3  Score=41.17  Aligned_cols=88  Identities=11%  Similarity=0.024  Sum_probs=57.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936          301 DEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK  380 (415)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~  380 (415)
                      ..+.+++..+++......+...|++. +-++.   .-.+|-.+++...     .+.+++..+.++ .+|-++--.    +
T Consensus       389 Gp~gL~~IArrvh~~T~~l~~~l~~a-ghel~---~k~fFDTLkI~~~-----~s~~~~l~rA~~-~~iNlr~~e----d  454 (1001)
T KOG2040|consen  389 GPHGLKEIARRVHNLTLILAEGLKNA-GHELQ---HKPFFDTLKIRCG-----CSAEEVLDRAAK-RQINLRLVE----D  454 (1001)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhc-chhhc---cccccceEEEEec-----CcHHHHHHHHHh-hcCceEEee----c
Confidence            35778899999999999999999876 55522   2236655555442     135555555544 456544322    5


Q ss_pred             CeEEEEe--eCChhhHHHHHHHHH
Q 014936          381 NWLRVTF--AVDPYSLEECLDRIK  402 (415)
Q Consensus       381 ~~iRi~~--~~~~~~l~~~l~~l~  402 (415)
                      +.|-+++  ..+++|++.++..+.
T Consensus       455 ~tigvslDETv~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  455 GTIGVSLDETVTEKDVDDLLWVFN  478 (1001)
T ss_pred             CceEEeecccccHHHHHHHHHHHc
Confidence            6788888  467889999888775

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=80.06  E-value=23  Score=30.25  Aligned_cols=98  Identities=17%  Similarity=0.230  Sum_probs=62.8

Q ss_pred             cEEEeCChHHHHHHHHHHhcCCCCEEE-----Ec-CC--------CCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936          102 DVFVTSGCTQAIDVAMALLSRPGANIL-----LP-RP--------GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE  167 (415)
Q Consensus       102 ~i~i~~g~~~al~~~~~~l~~~gd~vi-----~~-~p--------~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  167 (415)
                      -+.+.|||-.++.++..++. .|-.|.     .+ ++        ........++..|+.+......-  ...-.+++|.
T Consensus         3 ~~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve~L~   79 (223)
T COG2102           3 VIALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVEELK   79 (223)
T ss_pred             EEEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHHHHH
Confidence            36788898888887777663 443321     11 11        11122345677888888776532  1223567777


Q ss_pred             hhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEE
Q 014936          168 SLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV  209 (415)
Q Consensus       168 ~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l  209 (415)
                      ++++. +-..|+       +|.+.+..++..+-++|++.|+..
T Consensus        80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~  115 (223)
T COG2102          80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKV  115 (223)
T ss_pred             HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEE
Confidence            77654 222333       799999999999999999998763

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	415
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		1e-75
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		7e-74
1bw0_A	416	Crystal Structure Of Tyrosine Aminotransferase From		5e-50
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		1e-36
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		8e-25
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		3e-24
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		1e-22
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		1e-21
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		7e-21
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		7e-21
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		7e-21
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		1e-20
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		2e-20
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		2e-20
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		1e-19
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		3e-19
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		1e-17
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		8e-17
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		2e-16
3ihj_A	498	Human Alanine Aminotransferase 2 In Complex With Pl		2e-15
3tcm_A	500	Crystal Structure Of Alanine Aminotransferase From		7e-15
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		8e-15
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		1e-14
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		6e-14
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		6e-14
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		7e-14
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		1e-13
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		1e-13
1wst_A	417	Crystal Structure Of Multiple Substrate Aminotransf		2e-13
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		3e-13
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		5e-13
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		6e-13
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		6e-13
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		9e-13
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		1e-12
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		1e-12
3fdb_A	377	Crystal Structure Of A Putative Plp-Dependent Beta-		1e-11
3f6t_A	533	Crystal Structure Of Aspartate Aminotransferase (E.		5e-11
3h14_A	391	Crystal Structure Of A Putative Aminotransferase Fr		9e-11
3b1c_A	392	Crystal Structure Of Betac-S Lyase From Streptococc		3e-10
3piu_A	410	High-Resolution Structure Of Native Malus Domestica		7e-10
1m7y_A	435	Crystal Structure Of Apple Acc Synthase In Complex		7e-10
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		8e-10
1b8g_A	429	1-aminocyclopropane-1-carboxylate Synthase Length =		8e-10
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		1e-09
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		2e-09
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		3e-09
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		4e-09
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		6e-09
3dzz_A	391	Crystal Structure Of A Putative Plp-Dependent Amino		8e-09
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		1e-08
3ei8_A	432	Crystal Structure Of K270n Variant Of Ll-Diaminopim		2e-08
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		2e-08
4dgt_A	391	Crystal Structure Of Plp-Bound Putative Aminotransf		3e-08
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		7e-08
3l8a_A	421	Crystal Structure Of Metc From Streptococcus Mutans		8e-08
3ftb_A	361	The Crystal Structure Of The Histidinol-Phosphate A		8e-08
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		2e-07
3t32_B	383	Crystal Structure Of A Putative C-S Lyase From Baci		3e-07
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		6e-07
1c7n_A	399	Crystal Structure Of Cystalysin From Treponema Dent		7e-07
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		2e-06
1d2f_A	390	X-Ray Structure Of Maly From Escherichia Coli: A Py		2e-06
1vp4_A	425	Crystal Structure Of A Putative Aminotransferase (T		3e-06
4ge7_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		1e-05
3euc_A	367	Crystal Structure Of Histidinol-Phosphate Aminotran		1e-05
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		2e-05
4gdy_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		2e-05
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		2e-05
2o1b_A	404	Structure Of Aminotransferase From Staphylococcus A		2e-05
3ue8_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		3e-05
2r2n_A	425	The Crystal Structure Of Human Kynurenine Aminotran		3e-05
2xh1_A	425	Crystal Structure Of Human Kat Ii-Inhibitor Complex		3e-05
2qlr_A	425	Crystal Structure Of Human Kynurenine Aminotransfer		5e-05
2vgz_A	427	Crystal Structure Of Human Kynurenine Aminotransfer		6e-05
2dou_A	376	Probable N-Succinyldiaminopimelate Aminotransferase		6e-05
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		8e-05
3qgu_A	449	L,L-Diaminopimelate Aminotransferase From Chalmydom		9e-05
2zy2_A	544	Dodecameric L-Aspartate Beta-Decarboxylase Length =		1e-04
3nra_A	407	Crystal Structure Of An Aspartate Aminotransferase		4e-04

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score =  280 bits (716), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/375 (39%), Positives = 214/375 (57%), Gaps = 5/375 (1%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
           K VISL++GDPTV                   S K+NGYAP+ G   +R  +A Y    +
Sbjct: 31  KTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPE 90
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
            P  L   DV +TSGC+QAI++ +A+L+ PG NIL+PRPGF +Y   A    IEV+ ++L
Sbjct: 91  AP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNL 148
Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DL  +ESL D+ T  LV+ NP NPCG+V+S +HLQK+   A +    ++ADE
Sbjct: 149 LPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADE 208
Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           +YG +VF D  + PM    + VPIL+ G L+ RW+VPGWRLGW +  D   +F       
Sbjct: 209 IYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIRDG 268
Query: 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333
            +K    ILG P T +Q A+ SILQ+  + F++ TL+ LK + D+CY  +  IP +  P 
Sbjct: 269 LVKLSQRILG-PCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQ-PV 326
Query: 334 KPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS 393
           +P G+M +M+ + +           F  +L  E+SV  LP T     N+ RV   V    
Sbjct: 327 RPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATCFEYPNFFRVVITVPEVM 386
Query: 394 LEECLDRIKSFYQRH 408
           + E   RI+ F ++H
Sbjct: 387 MLEACSRIQEFCEQH 401

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score =  274 bits (700), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 147/375 (39%), Positives = 213/375 (56%), Gaps = 5/375 (1%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
           K +ISL++GDPTV                   S K+NGYAP+ G   +R  IA Y    +
Sbjct: 54  KTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPE 113
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
            P  L   DV +TSGC+QAID+ +A+L+ PG NIL+PRPGF +Y+  A    IEV+ ++L
Sbjct: 114 AP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNL 171
Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DL  +E L D+ T  L++ NP NPCG+V+S +HLQK+   A +    ++ADE
Sbjct: 172 LPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADE 231
Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           +YG +VF D  + P+    + VPIL+ G L+KRW+VPGWRLGW +  D   +F       
Sbjct: 232 IYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 291
Query: 274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH 333
            +K    ILG P T +Q A+ SIL +    F+  TL+ LK + D+CY  +  IP +  P 
Sbjct: 292 LVKLSQRILG-PCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR-PV 349
Query: 334 KPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYS 393
           +P G+M +M+ + +           F  +L  E+SV  LP T     N++RV   V    
Sbjct: 350 RPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVM 409
Query: 394 LEECLDRIKSFYQRH 408
           + E   RI+ F ++H
Sbjct: 410 MLEACSRIQEFCEQH 424

>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From Trypanosoma Cruzi Length = 416

Iteration: 1
 Score =  195 bits (495), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 193/386 (50%), Gaps = 15/386 (3%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K +I L++GDPT+                   S++ NGY PT G P  R A+A +     
Sbjct: 33  KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSF 92
Query: 95  PYK------LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
            +K      +  ++V + SG +  I +A+  +   G   L+P+PGFP YE       I +
Sbjct: 93  VHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGM 152
Query: 149 RHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
             ++  P+  WE DLD+I  L D  T  L++ NP NPCG+ +S +H++ +   A +L+  
Sbjct: 153 HFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLP 212
Query: 209 VIADEVYGHLVF-GDKP---FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264
           + +DE+Y  +VF G  P   F  +  F +TVP + LG  +   +VPGWRLGW +  DP G
Sbjct: 213 LFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHG 272
Query: 265 MFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324
               P  +E +K+   ++  P T +QAA+   L    +    + +  +++S    YN I 
Sbjct: 273 --NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIG 330
Query: 325 EIPCIS-CPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGLKNWL 383
           E  CI   P  P G+M +M +++L           F  KL +EE+V +LPGT      + 
Sbjct: 331 E--CIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFT 388
Query: 384 RVTFAVDPYSLEECLDRIKSFYQRHA 409
           R+T         E ++RIK+F QRHA
Sbjct: 389 RLTTTRPVEVYREAVERIKAFCQRHA 414

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 182/410 (44%), Gaps = 21/410 (5%)
Query: 12  GSIITIKGMLSL-------LMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXX 64
           GSI   K  LS+       ++ + + EK   KVI L +GDP                   
Sbjct: 8   GSIRASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDF--QPPEHMKEAYCK 65
Query: 65  XXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG 124
              E  N Y  + GLP  R+AI E   R     +TP+DV VT+  T+A+ +    L  PG
Sbjct: 66  AIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPG 125
Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
             IL+P P +P Y     F   +   +  + ++ W+ D+DDI       T A+ +INP N
Sbjct: 126 DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNN 185
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
           P G +Y  + L+++   A + +  VI+DE+Y  + +  +   P G     VP++ +  LS
Sbjct: 186 PTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISP-GSLTKDVPVIVMNGLS 244
Query: 245 KRWIVPGWRLGWFVTTDPCGMFRKPK-VVERMKKYFDILGDPATFIQAAVPSILQQPDEV 303
           K +   GWRLG+    DP     + +  ++R+ +       PA F  AA+  +    D  
Sbjct: 245 KVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQF--AAIAGLTGPMD-- 300
Query: 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKL 363
           + K+ +  LK+  D  Y ++ EIP IS   KP+G+  +  K+ +           F   +
Sbjct: 301 YLKEYMKKLKERRDYIYKRLNEIPGIST-TKPQGAFYIFPKIEVG---PWKNDKEFVLDV 356
Query: 364 AKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
                V+ + G+  G       R  F      LEE +DR + F +   K+
Sbjct: 357 LHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKERLKE 406

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 178/383 (46%), Gaps = 43/383 (11%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K VISL +G+P   +                  +    Y P  GL   R AIAE L +  
Sbjct: 26  KDVISLGIGEPDFDT-----PQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 80
Query: 95  PYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRH 150
             +  P  ++ V  G  QA  + ++   + G  +L+P P F  Y    + A  + +EV  
Sbjct: 81  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 140
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           ++   +  + +++D+++      T AL+I +P NP G V + + L+++A+   +   +VI
Sbjct: 141 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197
Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           +DEVY H ++ D     +    G+F  T+   T+   SK + + GWRLG FV        
Sbjct: 198 SDEVYEHFIYDDARHYSIASLDGMFERTI---TVNGFSKTFAMTGWRLG-FVAAPSW--- 250
Query: 267 RKPKVVERMKKYFDILGD--PATFIQAAVPSILQQPDEVFFKKTLNLLKQ---SVDICYN 321
               ++ERM K F +     P TFIQ A    L+  DE  +K    + K+      + + 
Sbjct: 251 ----IIERMVK-FQMYNATCPVTFIQYAAAKALK--DERSWKAVEEMRKEYDRRRKLVWK 303
Query: 322 KIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGL-- 379
           ++ E+   +   KP+G+  +  ++  + L        F   + KE  V ++PG+A G   
Sbjct: 304 RLNEMGLPTV--KPKGAFYIFPRIRDTGL----TSKKFSELMLKEARVAVVPGSAFGKAG 357
Query: 380 KNWLRVTFAVDPYSLEECLDRIK 402
           + ++R+++A     LEE +DR++
Sbjct: 358 EGYVRISYATAYEKLEEAMDRME 380

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 43/383 (11%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K VISL +G+P   +                  +    Y P  GL   R AIAE L +  
Sbjct: 25  KDVISLGIGEPDFDT-----PQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 79
Query: 95  PYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRH 150
             +  P  ++ V  G  QA  + ++   + G  +L+P P F  Y    + A  + +EV  
Sbjct: 80  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           ++   +  + +++D+++      T AL+I +P NP G V + + L+++A+   +   +VI
Sbjct: 140 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196
Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           +DEVY H ++ D     +    G+F  T+   T+   SK + + GWRLG FV        
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERTI---TVNGFSKTFAMTGWRLG-FVAAPSW--- 249
Query: 267 RKPKVVERMKKYFDILGD--PATFIQAAVPSILQQPDEVFFKKTLNLLKQ---SVDICYN 321
               ++ERM K F +     P TFIQ A    L+  DE  +K    + K+      + + 
Sbjct: 250 ----IIERMVK-FQMYNATCPVTFIQYAAAKALK--DERSWKAVEEMRKEYDRRRKLVWK 302
Query: 322 KIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGL-- 379
           ++ E+   +   KP+G+  +  ++  + L        F   + KE  V ++PG+A G   
Sbjct: 303 RLNEMGLPTV--KPKGAFYIFPRIRDTGL----TSKKFSELMLKEARVAVVPGSAFGKAG 356
Query: 380 KNWLRVTFAVDPYSLEECLDRIK 402
           + ++R+++A     LEE ++R++
Sbjct: 357 EGYVRISYATAYEKLEEAMERME 379

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 151/341 (44%), Gaps = 45/341 (13%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           YAP AGLP  R A+AE       + + P  V VTSG T+A+ V +  L  PG  +++  P
Sbjct: 57  YAPPAGLPALREALAEE------FAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEP 110
Query: 133 GFPIYELSAAFRHIEVR--HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190
            F +Y   A     + R    DL P+ G+ +DL  +E      T AL++  P NP G V+
Sbjct: 111 FFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTPRTRALLLNTPMNPTGLVF 169
Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-----FVPMGVFGSTVPILTLGSLSK 245
             + L+ +A  A      +I+DEVY  L +G++P     F P   F       T+GS  K
Sbjct: 170 GERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTF-------TVGSAGK 222
Query: 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ-QPDEVF 304
           R    G+R+GW V          P++   M+++        T +QA V   L+    E F
Sbjct: 223 RLEATGYRVGWIVGPKEF----MPRLAG-MRQWTSF--SAPTPLQAGVAEALKLARREGF 275
Query: 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLA 364
           ++      ++  D+    ++ +      + PEG+  +M +L               F+L 
Sbjct: 276 YEALREGYRRRRDLLAGGLRAMGLRV--YVPEGTYFLMAELP----------GWDAFRLV 323
Query: 365 KEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRI 401
           +E  V ++P +A  L    K+  R  F      L   L+R+
Sbjct: 324 EEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERL 364

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 20/332 (6%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y    G+   R  IA+ +       ++P+ V VT+G  QA+  A   L  PG  +++  P
Sbjct: 74  YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
            +  Y          V   +    K ++  L+++E L    T A++I +P NP G VY  
Sbjct: 134 VWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252
           + L+ L   A K    +I+DEVY  LV+ D+    + V      I+ +   SK   + GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 253 RLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL 312
           R+G+ ++++        KV   + K   I     + I         +  EV     +   
Sbjct: 254 RVGYLISSE--------KVATAVSK---IQSHTTSCINTVAQYAALKALEVDNSYMVQTF 302
Query: 313 KQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIIL 372
           K+  +    ++K++       +PEG+  +  K+             FC +L +E+ V ++
Sbjct: 303 KERKNFVVERLKKMGVKFV--EPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALV 353
Query: 373 PGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404
           PG+A     ++R++FA     L E LDRI+ F
Sbjct: 354 PGSAFLKPGFVRLSFATSIERLTEALDRIEDF 385

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           YAP AG+P  R A+AE   R+    +TP +  VT G +QA+      +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
            +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
           + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSIL--QQPDEVFFKKT 308
           GWR+G+      CG     K +  + +       P T  Q A    L  Q+    F +  
Sbjct: 240 GWRIGY-----ACGPKEVIKAMASVSRQSTT--SPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 309 LNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEES 368
               ++  D+    +  +   +   +P G+  V++  +                   E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----EAG 345
Query: 369 VIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
           V ++PGT       +R+++A    +L + L+R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           YAP AG+P  R A+AE   R+    +TP +  VT G +QA+      +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
            +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
           + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSIL--QQPDEVFFKKT 308
           GWR+G+      CG     K +  + +       P T  Q A    L  Q+    F +  
Sbjct: 240 GWRIGY-----ACGPKEVIKAMASVSRQSTT--SPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 309 LNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEES 368
               ++  D+    +  +   +   +P G+  V++  +                   E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----EAG 345
Query: 369 VIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
           V ++PGT       +R+++A    +L + L+R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           YAP AG+P  R A+AE   R+    +TP +  VT G +QA+      +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
            +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
           + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSIL--QQPDEVFFKKT 308
           GWR+G+      CG     K +  + +       P T  Q A    L  Q+    F +  
Sbjct: 240 GWRIGY-----ACGPKEVIKAMASVSRQSTT--SPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 309 LNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEES 368
               ++  D+    +  +   +   +P G+  V++  +                   E  
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----EAG 345
Query: 369 VIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
           V ++PGT       +R+++A    +L + L+R      R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 150/342 (43%), Gaps = 28/342 (8%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
           YAP AG+P  R A+AE   R+    +TP +  VT G +QA+ ++  A+L  PG  +++  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           P +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY 
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
            + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGWFVTTDPCGMFRKPK-VVERMKKY-FDILGDPATFIQAAVPSIL--QQPDEVFF 305
            GWR+G+      CG    PK V++ M          P T  Q A    L  Q+    F 
Sbjct: 239 TGWRIGY-----ACG----PKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFV 289
Query: 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAK 365
           +      ++  D+    +  +   +   +P G+  V++  +                   
Sbjct: 290 EMAREAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL----- 342
Query: 366 EESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
           E  V ++PGT       +R+++A    +L + L+R      R
Sbjct: 343 EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 159/362 (43%), Gaps = 47/362 (12%)
Query: 67  SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGA 125
           S   +GY    G   TR AIAE+L+         ++++ T G   ++ +   AL S    
Sbjct: 66  SVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYD 125
Query: 126 NILLPRPGFPIYEL---SAAFRHIEV----RHFDLLPDKGWEVDLDDIESLADQNTVALV 178
             +   P FP Y++   +A  R +EV     HF        ++D D +E   + +T  ++
Sbjct: 126 EFITIAPYFPEYKVFVNAAGARLVEVPADTEHF--------QIDFDALEERINAHTRGVI 177
Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLKT------LVIADEVYGHLVF-GDK-PFVPMGV 230
           I +P NP G VYS + ++KL++   K          +IADE Y  +V+ G K PFV    
Sbjct: 178 INSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTK-Y 236
Query: 231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ 290
           + +T   L   S SK   +PG R+G+ +  D        +V ++ + Y  + G       
Sbjct: 237 YDNT---LVCYSYSKSLSLPGERIGYVLVPD--------EVYDKAELYAAVCGAGRALGY 285
Query: 291 AAVPSILQQPDEVFFKKT--LNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS 348
              PS+ Q+        T  +N  K++ D+ Y  +  I    C  KP+G+    +K    
Sbjct: 286 VCAPSLFQKXIVKCQGATGDINAYKENRDLLYEGLTRIG-YHC-FKPDGAFYXFVK---- 339
Query: 349 LLXXXXXXXXFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRH 408
                     FC K AKEE V+I+     G   W+R+++ VD   ++      +  Y+++
Sbjct: 340 --ALEDDSNAFCEK-AKEEDVLIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKIYKKY 396
Query: 409 AK 410
            K
Sbjct: 397 NK 398

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 145/341 (42%), Gaps = 26/341 (7%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           YAP AG+P  R A+AE   R+    +TP +  VT G  QA+      +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
            +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
           + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPK-VVERMKKY-FDILGDPATFIQAAVPSIL--QQPDEVFFK 306
           GWR+G+      CG    PK V++ M          P T  Q A    L  Q+    F +
Sbjct: 240 GWRIGY-----ACG----PKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVE 290
Query: 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKE 366
                 ++  D+    +  +   +   +P G+  V++  +                   E
Sbjct: 291 MAREAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----E 343
Query: 367 ESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR 407
             V ++PGT       +R+++A    +L + L+R      R
Sbjct: 344 AGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 26/334 (7%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           YAP AG+P  R A+AE   R+    +TP +  VT G  QA+      +  PG  +++  P
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
            +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY  
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVP 250
           + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +  + + 
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAMT 239
Query: 251 GWRLGWFVTTDPCGMFRKPK-VVERMKKY-FDILGDPATFIQAAVPSIL--QQPDEVFFK 306
           GWR+G+      CG    PK V++ M          P T  Q A    L  Q+    F +
Sbjct: 240 GWRIGY-----ACG----PKEVIKAMASVSSQSTTSPDTIAQWATLEALTNQEASRAFVE 290
Query: 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKE 366
                 ++  D+    +  +   +   +P G+  V++  +                   E
Sbjct: 291 MAREAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTSPIAPDEVRAAERLL-----E 343
Query: 367 ESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDR 400
             V ++PGT       +R+++A    +L + L+R
Sbjct: 344 AGVAVVPGTDFAAFGHVRLSYATSEENLRKALER 377

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 25/339 (7%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y P AG P  R AIA+ L RD       +++ VT+G  Q+I   M  +  PG  +++P P
Sbjct: 63  YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122
Query: 133 GFPIY-ELSAAFRHIEVRHFDLLP---DKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188
            +  Y E+        V    +LP   +  ++V  + I       T  LV   P NP G 
Sbjct: 123 FWVSYPEMVKLAEGTPV----ILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGM 178
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV--PILTLGSLSKR 246
           VY+   ++ +A+ A +    V++DE+Y  +++ D   + +G          +     +K 
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT 238
Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ-AAVPSILQQPDEVFF 305
           + + GWR+G+     P        V    K       +  TF Q  A+ +     D V  
Sbjct: 239 YAMTGWRVGFLAGPVPL-------VKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCV-- 289
Query: 306 KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAK 365
           ++ L    +      + +  +P + CP KP+G+  +      S+         FC +L  
Sbjct: 290 QEMLAAFAERRRYMLDALNAMPGLECP-KPDGAFYMF----PSIAKTGRSSLDFCSELLD 344
Query: 366 EESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404
           +  V  +PG A G  + +R+++A D  +++  ++R++ F
Sbjct: 345 QHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKF 383

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 155/340 (45%), Gaps = 25/340 (7%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y    G P  ++++++     L   + P  +  T+G T A  + +  L  PG +++   P
Sbjct: 59  YGWIEGSPAFKKSVSQ-----LYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 133 GFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
            +  +Y++  +    EV  + +  + GW  DL+ +  L    T  + I N  NP G V  
Sbjct: 114 TYQQLYDIPKSL-GAEVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXD 172
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251
             +L++L E A+++   +++DEVY      D P + + V+   + +    SLS  + +PG
Sbjct: 173 RTYLEELVEIASEVGAYILSDEVYRSFSELDVPSI-IEVYDKGIAV---NSLSXTYSLPG 228
Query: 252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNL 311
            R+GW             +V + ++ Y D     A      V  +     +   ++  ++
Sbjct: 229 IRIGWVAANH--------QVTDILRDYRDYTXICAGVFDDLVAQLALAHYQEILERNRHI 280
Query: 312 LKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVII 371
           L++++ I    I+E P +S   +P       +K+ +           FC +L +E  V++
Sbjct: 281 LEENLAILDQWIEEEPLVSYI-RPAVVSTSFVKIAVD-----XPXEDFCLQLLQEHGVLL 334
Query: 372 LPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
           +PG       ++R+ FA +  +L + L+++  F +R  K+
Sbjct: 335 VPGNRFERDGYVRLGFACEQETLIKGLEKLSQFLRRFDKE 374

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 22/278 (7%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y+ +AG+   R A A Y  R     + P +V VT+G ++AI  + A+++ PG  IL+  P
Sbjct: 75  YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
            +  Y   A    +++       ++G+ +   ++ES  ++ T  +V+ NP NP G VY  
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-----LTLGSLSKRW 247
              + L E A +    +I DEVY  +VF        G F S + I     + + S+S ++
Sbjct: 194 DEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXKF 246
Query: 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKK 307
              G R+G  +T       R  +++    K       P    Q     +L   D+ FF  
Sbjct: 247 SACGARVGCLIT-------RNEELISHAXKLAQGRLAPPLLEQIGSVGLLNL-DDSFFDF 298
Query: 308 TLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL 345
                ++ V+    K++E   +    KP G+  +  +L
Sbjct: 299 VRETYRERVETVLKKLEE-HGLKRFTKPSGAFYITAEL 335

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGW 159
            +V VT G T+AI  A+  L  PG+ +LL  P +  Y    A          L+PD +G+
Sbjct: 87  TEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGF 146
Query: 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219
            +D D +       T AL+I +P NP G V S   L  +AE A     +VI DEVY HLV
Sbjct: 147 ALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV 206
Query: 220 FGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
           F     +P+  F G     +T+ S +  +   GW++GW      CG       V   K+Y
Sbjct: 207 FDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW-----ACGPAELIAGVRAAKQY 261
Query: 279 FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326
              +G  A F Q AV   L   D  +     N L+   D     + EI
Sbjct: 262 LSYVGG-APF-QPAVALALDTED-AWVAALRNSLRARRDRLAAGLTEI 306

>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp Length = 498

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/383 (21%), Positives = 167/383 (43%), Gaps = 50/383 (13%)
Query: 73  YAPTAGLPLTRRAIAEYLSR-DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA----NI 127
           Y+ + G+   R  +A Y++R D      P+++++T+G +  I   + +L   G      +
Sbjct: 125 YSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGV 184
Query: 128 LLPRPGFPIYE-LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIIN 181
           ++P P +P+Y  + +    I+V ++ L  +  W ++++++     +     +   L IIN
Sbjct: 185 MIPIPQYPLYSAVISELDAIQVNYY-LDEENCWALNVNELRRAVQEAKDHCDPKVLCIIN 243
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--------DKPFVPMG-VFG 232
           PGNP G V S + ++ +   A + K  ++ADEVY   V+          K    MG  + 
Sbjct: 244 PGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS 303
Query: 233 STVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQA 291
           S V + +  S SK ++   G+R G+    +       P++  ++ K   +   P    QA
Sbjct: 304 SNVELASFHSTSKGYMGECGYRGGYMEVIN-----LHPEIKGQLVKLLSVRLCPPVSGQA 358
Query: 292 AVPSILQQP---DEVFFK------KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM 342
           A+  ++  P   +E F +        L  L +   +  +   ++P I C +  +G+M   
Sbjct: 359 AMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHC-NPLQGAMYAF 417
Query: 343 LKL-------NLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGLKN---WLRVTFAVDPY 392
            ++         +          +C KL +E  + ++PG+  G +      R+T      
Sbjct: 418 PRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVE 477
Query: 393 SLEECLDRIKSFYQRHAKQLQRY 415
            L+  L ++K F   H   L++Y
Sbjct: 478 KLKTVLQKVKDF---HINFLEKY 497

>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum Vulgare Length = 500

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 150/343 (43%), Gaps = 48/343 (13%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLPR 131
           Y+ + G+   R AIA  ++    +    +D+F+T G +  + + M LL R   + IL+P 
Sbjct: 130 YSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPI 189
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE-SLADQ-----NTVALVIINPGNP 185
           P +P+Y  S A     +  + L    GW ++  D++  L D      N  ALV+INPGNP
Sbjct: 190 PQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNP 249
Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--------KPFVPMGVFGSTVPI 237
            G V + ++   + +       +++ADEVY   ++ D        K    +G     +P+
Sbjct: 250 TGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPL 309
Query: 238 LTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--------------L 282
           ++  S+SK +    G R G+F  T     F  P V E++ K   +              +
Sbjct: 310 VSYQSVSKGYYGECGKRGGYFEITG----FSAP-VREQIYKIASVNLCSNITGQILASLV 364
Query: 283 GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM 342
            +P      +  S   + D +    +L    ++++  +NK++ I C    ++ EG+M V 
Sbjct: 365 MNPPKASDESYASYKAEKDGIL--ASLARRAKALEHAFNKLEGITC----NEAEGAMYVF 418
Query: 343 LKLNL-------SLLXXXXXXXXFCFKLAKEESVIILPGTAVG 378
            ++ L       +          +  +L +   ++++PG+  G
Sbjct: 419 PQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG 461

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
           N Y+PT G P    ++ +  S     +L   +V VT+G  + I   +  L   G  +++ 
Sbjct: 89  NQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVF 148
Query: 131 RPGFPIYELSAAFRHIEVRHFDLLPDKG----------WEVDLDDIESLADQNTVALVII 180
            P F  Y  +      +V +  + P K           W +D +  E      T A++I 
Sbjct: 149 EPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIIN 208
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
            P NP G V++ + L  L     K   ++I+DEVY HL F D  F  +      +  LTL
Sbjct: 209 TPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS-FTRIATLSPEIGQLTL 267
Query: 241 --GSLSKRWIVPGWRLGWFVTTD 261
             GS    +   GWR+GW ++ +
Sbjct: 268 TVGSAGXSFAATGWRIGWVLSLN 290

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/380 (21%), Positives = 154/380 (40%), Gaps = 37/380 (9%)
Query: 31  EKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL 90
           E   KKVI L +G+P  ++                  E    Y  + G+   R  I+E  
Sbjct: 25  ESEGKKVIHLEIGEPDFNT-----PKPIVDEGIKSLKEGKTHYTDSRGILELREKISELY 79
Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
                  + P+++ +T G +  +  A++ +   G  +L+  P +P Y+    F   +   
Sbjct: 80  KDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVF 139
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            D          ++ +E      T A++I +P NP G V      +++ E A +    +I
Sbjct: 140 CDFT--------VESLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYII 187
Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DE+Y  LV+  K +  +    +    + +   S  + + GWR+G+ ++ D        +
Sbjct: 188 SDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISND--------E 239
Query: 271 VVERMKKYFDILGDPA-TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCI 329
           ++E + K    L   A T  Q A     ++  E      +    +   +    +K+    
Sbjct: 240 IIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGW- 298
Query: 330 SCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGL--KNWLRVTF 387
              + P G+  V   +             F +KL KE+ V + PG   G   KN++R+++
Sbjct: 299 -EVNNPIGAYYVFPNIG-------EDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISY 350
Query: 388 AVDPYSLEECLDRIKSFYQR 407
           A    +++E L+RIK F  +
Sbjct: 351 ANSYENIKEGLERIKEFLNK 370

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 68  EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGAN 126
           +  N Y    G P   +A++    +    ++ PN+ + V  G   ++  ++  L  PG  
Sbjct: 52  DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDE 111
Query: 127 ILLPRPGFPIYE----LSAA---FRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVAL 177
           +++  P +  YE    ++ A   F  +  +  D +      W  D  ++ES     T A+
Sbjct: 112 VIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171
Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVP 236
           ++  P NP G VY+ Q LQ +A+   K  TL I+DEVY  LV+     V +    G    
Sbjct: 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAV 293
            +T+GS  K + V GW+LGW  +  P  + +  + V++   Y       AT +QAA+
Sbjct: 232 TITIGSAGKTFSVTGWKLGW--SIGPAHLIKHLQTVQQNSFY-----TCATPLQAAL 281

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 139/342 (40%), Gaps = 27/342 (7%)
Query: 68  EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGAN 126
           E  +GY+ + G+P  RRAI+ +       ++ P ++  VT G  + +   M      G  
Sbjct: 66  EDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDT 125
Query: 127 ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186
           IL+P P +PI+   A     +VR   L+P   +  +L+     +      +++  P NP 
Sbjct: 126 ILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPT 185
Query: 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSK 245
                    +++   A +   +V+ D  Y  +V+ G K    M V G+    +   +LSK
Sbjct: 186 AQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSK 245
Query: 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVE---RMKKYFDILGDPATFIQAAVPSILQ-QPD 301
            + + GWR+G+ V          P++V    R+K Y D      TF    V +I   + D
Sbjct: 246 SYNMAGWRIGFMVGN--------PELVSALARIKSYHDY----GTFTPLQVAAIAALEGD 293
Query: 302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCF 361
           +   +      +Q  D+    ++E   +     P+ SM V  K+             F  
Sbjct: 294 QQCVRDIARQYQQRRDVLVKGLREAGWMV--ENPKASMYVWAKIPEPY--AHLGSLEFAK 349
Query: 362 KLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKS 403
           KL ++  V + PG   G      V FA     L E  DR++ 
Sbjct: 350 KLLQDAKVSVSPGIGFGDYGDDHVRFA-----LIENRDRLRQ 386

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 28/311 (9%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILL 129
           N YAP  G+   R AIA+   R   Y+   + D+ VT+G T+A+  A+  L R G  ++ 
Sbjct: 61  NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
             P +  Y  + A     V+   L P   + VD  +  +L  + T  +++  P NP   V
Sbjct: 121 FDPSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEFAALLSERTRLVILNTPHNPSATV 179
Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWI 248
           +       L +     +  VI+DEVY H+ F  +    +          + + S  K + 
Sbjct: 180 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH 239
Query: 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQAAVPSILQQPDEVFFKK 307
           + GW++G+ V   P         + ++ +Y    +  PA   Q A+  +L+   E +   
Sbjct: 240 MTGWKVGYCVAPAPIS-----AEIRKVHQYLTFSVNTPA---QLALADMLRAEPEHYLAL 291
Query: 308 TLNLLKQSVDICYNKIKE-----IPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFK 362
             +  +Q  DI  N + E     +PC       EG+  +++  +            FC  
Sbjct: 292 P-DFYRQKRDILVNALNESRLEILPC-------EGTYFLLVDYS---AVSTLDDVEFCQW 340
Query: 363 LAKEESVIILP 373
           L +E  V  +P
Sbjct: 341 LTQEHGVAAIP 351

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y  T G P   + +A +    L  ++ P  +V VT G   A+  A   L   G  +++
Sbjct: 61  NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
             P F  YE   + A  R +        +++ +L     W++D  ++       T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
             P NP G V+S + L+ +A    +   + I DEVY  +V+     + +    G     L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
           T+GS  K +   GW++GW +  D
Sbjct: 241 TIGSAGKTFSATGWKVGWVLGPD 263

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y    G P   +A+++  S+ +   + P  +V VT G  +A+   +      G  +++
Sbjct: 71  NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIIN 181
             P F  YE          R   L P+K         W +D +++E+L ++ T  ++I  
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----- 236
           P NP G V     L+ +A    K   L ++DEVY H+VF  +PF  + +   T+P     
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVF--EPFEHIRI--CTLPGMWER 246
Query: 237 ILTLGSLSKRWIVPGWRLGW 256
            +T+GS  K + + GW++GW
Sbjct: 247 TITIGSAGKTFSLTGWKIGW 266

>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase (Msat) From Thermococcus Profundus Length = 417

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 164/393 (41%), Gaps = 35/393 (8%)
Query: 37  VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           VISLA G P   +                 ++K   Y  T G    R A+A ++ +    
Sbjct: 43  VISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDI 102
Query: 97  KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL- 153
            ++  ++   +G  QA+D+   +   PG  I++  P +    L+A  AF++ +     + 
Sbjct: 103 PMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTY----LAAIQAFKYYDPEFISIP 158
Query: 154 LPDKGWEVDLDDIESLADQNT-----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
           L DKG  VDL + +    +       +   +    NP G   S    +KL E AN+   L
Sbjct: 159 LDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFL 218
Query: 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           ++ D  Y  L +  +P  P+  F     ++ LG+ SK  + PG+R+GW V   P  + RK
Sbjct: 219 IVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFRIGW-VAAHPH-LIRK 275
Query: 269 PKVVERMKKYFDILGDPATFIQAAVPSILQQP--DEVFFKKTLNLLKQSVDICYNKIKE- 325
              +E  K+  D+  +  TF QA     ++    DE    K +   K   D     ++E 
Sbjct: 276 ---MEIAKQSIDLCTN--TFGQAIAWKYVENGYLDE-HIPKIIEFYKPRRDAMLEALEEY 329
Query: 326 IPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAVGL----KN 381
           +P      KPEG M V + L   +            + A  + V  +PG A  +    KN
Sbjct: 330 MPEGVEWTKPEGGMFVRVTLPEGI------DTKLMMERAVAKGVAYVPGEAFFVHRDKKN 383
Query: 382 WLRVTFAVDP-YSLEECLDRIKSFYQRHAKQLQ 413
            +R+ F   P  ++ E + R+    +   K+++
Sbjct: 384 TMRLNFTYVPEETIREGVRRLAETIKEEMKRVK 416

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 68  EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGAN 126
           +  N Y    G P   +A++    +    ++ PN+ + V  G   ++  ++  L  PG  
Sbjct: 52  DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDE 111
Query: 127 ILLPRPGFPIYE----LSAA---FRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVAL 177
           +++  P +  YE    ++ A   F  +  +  D +      W  D  ++ES     T A+
Sbjct: 112 VIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171
Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVP 236
           ++  P NP G VY+ Q LQ +A+   K  TL I+DEVY  LV+     V +    G    
Sbjct: 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAV 293
            +T+GS    + V GW+LGW  +  P  + +  + V++   Y       AT +QAA+
Sbjct: 232 TITIGSAGXTFSVTGWKLGW--SIGPAHLIKHLQTVQQNSFY-----TCATPLQAAL 281

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y  T G P   + +A +    L  ++ P  +V VT G   A+  A   L   G  +++
Sbjct: 61  NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
             P F  YE   + A  R +        +++ +L     W++D  ++       T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
             P NP G V+S + L+ +A    +   + I DEVY  +V+     + +    G     L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
           T+GS    +   GW++GW +  D
Sbjct: 241 TIGSAGXTFSATGWKVGWVLGPD 263

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y  T G P   + +A +    L  ++ P  +V VT G   A+  A   L   G  +++
Sbjct: 61  NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
             P F  YE   + A  R +        +++ +L     W++D  ++       T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
             P NP G V+S + L+ +A    +   + I DEVY  +V+     + +    G     L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
           T+GS    +   GW++GW +  D
Sbjct: 241 TIGSAGXTFSATGWKVGWVLGPD 263

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y    G P   +A+++  S+ +   + P  +V VT G  +A+   +      G  +++
Sbjct: 71  NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIIN 181
             P F  YE          R   L P+K         W +D +++E+L ++ T  ++I  
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----- 236
           P NP G V     L+ +A    K   L ++DEVY H+VF  +PF  + +   T+P     
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVF--EPFEHIRI--CTLPGMWER 246
Query: 237 ILTLGSLSKRWIVPGWRLGW 256
            +T+GS    + + GW++GW
Sbjct: 247 TITIGSAGXTFSLTGWKIGW 266

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 95/395 (24%), Positives = 158/395 (40%), Gaps = 48/395 (12%)
Query: 17  IKG--MLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYA 74
           IKG  +  ++ ++ + +K   K+ISLA GDP                       K   Y 
Sbjct: 14  IKGSALADVMKKASELQKKGVKLISLAAGDPD-PELIPRAVLGEIAKEVLEKEPKSVMYT 72
Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
           P  G+P  R  +A +L +    +++P ++ +T G T A+D+   +L  PG  ++   P +
Sbjct: 73  PANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSY 132
Query: 135 -----PIYELSAAFRHIEVRHFDLLPDKGWEVDL--DDIESL-ADQNTVALVIINPG--N 184
                   +L A    + V       + G  VDL  + I+ L A    V L+   P   N
Sbjct: 133 INTLLAFEQLGAKIEGVPVD------NDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQN 186
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
           P G   S +  + L E A+K   L+I D  Y  + +     VP+    +   ++  G+LS
Sbjct: 187 PMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLS 246
Query: 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPS--ILQQPDE 302
           K  +  G+R+GW +              E +KK   +   P  F   A+     L+    
Sbjct: 247 K-VLGTGFRIGWIIAEG-----------EILKKVL-MQKQPIDFCAPAISQYIALEYLKR 293
Query: 303 VFFKK-----TLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXX 357
            +F+K      L   K+  DI    ++     +   KP   M VM       L       
Sbjct: 294 GYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMF-----FLPEGADGI 348
Query: 358 XFCFKLAKEESVIILPG----TAVGLKNWLRVTFA 388
            F  +L + E V+++PG    T    KN +R+ F+
Sbjct: 349 SFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS 383

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/392 (22%), Positives = 169/392 (43%), Gaps = 58/392 (14%)
Query: 37  VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +ISLA G P   +                 ++K   Y  T G    R  + ++L +   Y
Sbjct: 78  IISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKR--Y 135
Query: 97  KLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL 153
            ++  ND+ +TSG  QA+D+   +   PG  +++  P +    L+A  AF   E ++  +
Sbjct: 136 GISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNFYEPQYIQI 191
Query: 154 -LPDKGWEVD-----LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
            L D+G +V+     L +++S   +  V   +    NP G   +    + L E A++   
Sbjct: 192 PLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDF 251
Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
           +V+ D+ YG L +   P   +    +   ++ LG+ SK  + PG+R+GW V  DP G+ R
Sbjct: 252 IVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIR 308
Query: 268 KPKVVERMK-------------KYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314
           K ++ ++               +Y D       +++  +P I +     F+K   + + +
Sbjct: 309 KMEIAKQSTDLCTNVFGQVVAWRYVD-----GGYLEKHIPEIRK-----FYKPRRDAMLE 358
Query: 315 SVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPG 374
           +++      + +P      KPEG M + + L   +            + A ++ V  +PG
Sbjct: 359 ALE------EFMPEGVKWTKPEGGMFIWVTLPDGI------DSKKMLERAIKKGVAYVPG 406
Query: 375 TAV----GLKNWLRVTFA-VDPYSLEECLDRI 401
            A      +KN +R+ F  VD   + E + R+
Sbjct: 407 EAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRL 438

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 37  VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +ISLA G P   +                 ++K   Y  T G    R  + ++L +   Y
Sbjct: 33  IISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKR--Y 90
Query: 97  KLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL 153
            ++  ND+ +TSG  QA+D+   +   PG  +++  P +    L+A  AF   E ++  +
Sbjct: 91  GISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNFYEPQYIQI 146
Query: 154 -LPDKGWEVD-----LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
            L D+G +V+     L +++S   +  V   +    NP G   +    + L E A++   
Sbjct: 147 PLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDF 206
Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
           +V+ D+ YG L +   P   +    +   ++ LG+ SK  + PG+R+GW V  DP G+ R
Sbjct: 207 IVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIR 263
Query: 268 KPKVVER 274
           K ++ ++
Sbjct: 264 KMEIAKQ 270

>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium Diphtheriae At 1.99 A Resolution Length = 377

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 112/260 (43%), Gaps = 19/260 (7%)
Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           GY P   L    +A AE+ +    Y+  P  +F      + + +A+   +   + +++P 
Sbjct: 55  GYQPDGSL--LSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPT 112
Query: 132 PGFP--IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           P +P   + LSA  R        +  D    ++L D+E        ++++ NP NP G V
Sbjct: 113 PAYPPFFHLLSATQRE------GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXV 166
Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-LTLGSLSKRWI 248
           ++ + L +L + A++    V+ DE++  LVF  +  V  GV  +   + +T+ + S  W 
Sbjct: 167 FAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSXAWN 226
Query: 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKT 308
           + G +    +       F  P   E  ++   ++ D A+ +         +    F  + 
Sbjct: 227 IAGLKCAQII-------FSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQE 279
Query: 309 LNLLKQSVDICYNKI-KEIP 327
           +  LK + D   ++I K IP
Sbjct: 280 VAYLKNNHDFLLHEIPKRIP 299

>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C. 2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus Ncfm At 2.15 A Resolution Length = 533

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 86  IAEYLSRDLPYK----LTPNDVFVTSGCTQAIDVAMALLS-----RPGANILLPRPGFPI 136
           I  Y  ++L YK        D+F T G T AI  A   L+     + G  I +  P F  
Sbjct: 146 IINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP 205
Query: 137 YELSAAFRHIEVRHFDL--LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
           Y      +  E+   DL       WE++ ++IE L D +  AL+++NP NP    +    
Sbjct: 206 YLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNA 265
Query: 195 LQKLAETANKL-KTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILT--LGSLSKRWIVP 250
           L  + +   K  K  +I+DEVYG        FVP      S VP  T  + S S  +   
Sbjct: 266 LNAIKQAVEKNPKLXIISDEVYG-------AFVPNFKSIYSVVPYNTXLVYSYSXLFGCT 318
Query: 251 GWRLGWF------VTTDPCGMFRKPKVVERMKKYFDILGDP 285
           GWRLG        V  D      K ++ +  K+Y  ++ DP
Sbjct: 319 GWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDP 359

>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From Silicibacter Pomeroyi Length = 391

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 132/351 (37%), Gaps = 41/351 (11%)
Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           GY    GLP  R+ IA          L P  V +T G +    +A   L   G  + +  
Sbjct: 63  GYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGA 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI---------ESLADQNTVALVIINP 182
           PG+P Y      R I +R   L+P     VDL               A  +   L + +P
Sbjct: 123 PGYPSY------RQI-LRALGLVP-----VDLPTAPENRLQPVPADFAGLDLAGLXVASP 170
Query: 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242
            NP G    +     L E A       I+DE+Y  + +  K    + +   T     + S
Sbjct: 171 ANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL---TDECYVINS 227
Query: 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDE 302
            SK +   GWR+GW V  +      + +VVER+ +   I    A+ + A           
Sbjct: 228 FSKYFSXTGWRVGWXVVPE-----DQVRVVERIAQNXFICAPHASQVAALAALDCDAE-- 280
Query: 303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFK 362
              +  L++ K +  +   ++ +         P+G+  V   ++            F  +
Sbjct: 281 --LQANLDVYKANRKLXLERLPKAGFTRI-APPDGAFYVYADVS----DLTDDSRAFAAE 333
Query: 363 LAKEESVIILPGTAVGLKNW---LRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           + ++  V + PG     +     LR ++A     +EE LDR+++F Q   +
Sbjct: 334 ILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFXQARGE 384

>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus Anginosus: Internal Aldimine Form Length = 392

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 84  RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
           +A+ ++   +  Y     D+    G   AI +A+   ++ G  +L+  P +P +  S   
Sbjct: 73  QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 144 RHIEVRHFDLLPDKG-WEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAET 201
            + ++    L  + G +++D + +E+   +N V L ++ NP NP G V+  + L+++   
Sbjct: 133 NNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHL 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGW 256
             K   ++++DE++  L       V    F +  P      L L S +K + + G +  +
Sbjct: 193 CQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNSY 249
Query: 257 FVTTDP--CGMFRKPKVV 272
            +  +P  C  F+  ++V
Sbjct: 250 AIIENPTLCAQFKHQQLV 267

>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L- Aminoethoxyvinylglycine Length = 435

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 148/349 (42%), Gaps = 29/349 (8%)
Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  ++A+ ++++     K+T  PN + +T+G T A +  +  L+ PG  +L+P P +P
Sbjct: 87  GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
            ++    +R  +E+         G+   E  L++    A++  +    +++ NP NP G 
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
             +   L  L          +I+DE+Y    F    F+  M V         S V   + 
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 266
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ 298
            + SLSK   +PG+R+G   + D   +    K+       F ++      + +A+ S  +
Sbjct: 267 VVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-----FGLVSSQTQHLLSAMLSD-K 320
Query: 299 QPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXX 358
           +  + +  +    LKQ      + +++   ISC +   G    +   +L           
Sbjct: 321 KLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAGLFCWVDMRHLLRSNTFEAEME 379
Query: 359 FCFKLAKEESVIILPGTAVGLKN--WLRVTFAVDP-YSLEECLDRIKSF 404
              K+  E  + I PG++       W RV FA  P  +L+  + R+K+F
Sbjct: 380 LWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 148/349 (42%), Gaps = 29/349 (8%)
Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  ++A+ ++++     K+T  PN + +T+G T A +  +  L+ PG  +L+P P +P
Sbjct: 87  GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
            ++    +R  +E+         G+   E  L++    A++  +    +++ NP NP G 
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
             +   L  L          +I+DE+Y    F    F+  M V         S V   + 
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 266
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ 298
            + SLSK   +PG+R+G   + D   +    K+       F ++      + +A+ S  +
Sbjct: 267 VVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-----FGLVSSQTQHLLSAMLSD-K 320
Query: 299 QPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXX 358
           +  + +  +    LKQ      + +++   ISC +   G    +   +L           
Sbjct: 321 KLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAGLFCWVDMRHLLRSNTFEAEME 379
Query: 359 FCFKLAKEESVIILPGTAVGLKN--WLRVTFAVDP-YSLEECLDRIKSF 404
              K+  E  + I PG++       W RV FA  P  +L+  + R+K+F
Sbjct: 380 LWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428

>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase Length = 429

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 148/349 (42%), Gaps = 29/349 (8%)
Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  ++A+ ++++     K+T  PN + +T+G T A +  +  L+ PG  +L+P P +P
Sbjct: 85  GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 144
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
            ++    +R  +E+         G+   E  L++    A++  +    +++ NP NP G 
Sbjct: 145 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 204
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
             +   L  L          +I+DE+Y    F    F+  M V         S V   + 
Sbjct: 205 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 264
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ 298
            + SLSK   +PG+R+G   + D   +    K+       F ++      + +A+ S  +
Sbjct: 265 VVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-----FGLVSSQTQHLLSAMLSD-K 318
Query: 299 QPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXX 358
           +  + +  +    LKQ      + +++   ISC +   G    +   +L           
Sbjct: 319 KLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAGLFCWVDMRHLLRSNTFEAEME 377
Query: 359 FCFKLAKEESVIILPGTAVGLKN--WLRVTFAVDP-YSLEECLDRIKSF 404
              K+  E  + I PG++       W RV FA  P  +L+  + R+K+F
Sbjct: 378 LWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 426

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 136/350 (38%), Gaps = 33/350 (9%)
Query: 78  GLPLTRRAIAEYL--SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  R+AIA+++  +R    +  P  V +  G T A +  +  L+ PG   L+P P +P
Sbjct: 84  GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 136 IYELSAAFR--------HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
            +     +R        H E  +   +  K  +   ++ +  ++     L++ NP NP G
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQK-SNIKVKGLILTNPSNPLG 202
Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG--------VFGSTVPILT 239
                  L+ +    N+    ++ DE+Y   VF    FV +          + +   +  
Sbjct: 203 TTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI 262
Query: 240 LGSLSKRWIVPGWRLG--WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSIL 297
           + SLSK   +PG+R+G  +    D     RK          F ++     +  AA+ S  
Sbjct: 263 VYSLSKDMGLPGFRVGIIYSFNDDVVNCARK-------MSSFGLVSTQTQYFLAAMLSDE 315
Query: 298 QQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXX 357
           +  D    +  + L K+     +    E+  I C     G    M    L          
Sbjct: 316 KFVDNFLRESAMRLGKRHKH--FTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEM 373
Query: 358 XFCFKLAKEESVIILPGTAVGLKN--WLRVTFA-VDPYSLEECLDRIKSF 404
                +  +  + + PG++   +   W RV FA +D  +++  L RI+ F
Sbjct: 374 SLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF 423

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 147/343 (42%), Gaps = 40/343 (11%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y+PT G    R  +AE++       + P +V +T+G  QA+D+   +    G+ +LL  P
Sbjct: 70  YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG--NPCGNVY 190
            +       AFR ++   F  +P      DLD +E +  +     + + P   NP G + 
Sbjct: 124 SY--MGAIQAFR-LQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV---PILTLGSLSKRW 247
                ++L +   +   +V+ D+ Y  L FG+     +           ++ LGS SK  
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 248 IVPGWRLGWFVTTDPCGMFRKPKVVERM---KKYFDILGDPATFIQAAVPSILQQPDEVF 304
           + PG R+ + V          P+ ++++   K+  D+        Q  V  +L++     
Sbjct: 240 LSPGLRVAFAVA--------HPEALQKLVQAKQGADL--HTPMLNQMLVHELLKEGFSER 289
Query: 305 FKKTLNLLKQSVDICYNKI-KEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKL 363
            ++   + ++      + + +E+P      +P+G M V ++L   L           F+ 
Sbjct: 290 LERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGL------SAEGLFRR 343
Query: 364 AKEESVIILPGTAV----GLKNWLRVTFA-VDPYSLEECLDRI 401
           A EE+V  +PG       G +N LR+++A +D   + E + R+
Sbjct: 344 ALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRL 386

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 17/229 (7%)
Query: 103 VFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161
           +   +G T++I  VA  L  R     ++  PGF  Y  + A    E+R + L    GW++
Sbjct: 79  ILAGNGETESIFTVASGLKPR---RAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL 135
Query: 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221
               +E+L   +   L +  P NP G +     LQ +A+    L   +I DE +   +  
Sbjct: 136 TDAILEALT-PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPH 194
Query: 222 DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI 281
           +  F+P         I  L SL+K + +PG RLG+ V +D   M R  +  ++M    + 
Sbjct: 195 ETGFIP--ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRR--QQMPWSVNA 250
Query: 282 LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330
           L        AA+   +   D  + + T + L++     Y  + ++P ++
Sbjct: 251 L--------AALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLT 291

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 89/238 (37%), Gaps = 20/238 (8%)
Query: 36  KVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95
           ++ISL  GD T                     E + GY    G    R+AIAE   RDL 
Sbjct: 71  QLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKTLRKAIAETFYRDLH 130
Query: 96  YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF------------ 143
            K   N+VFV+ G    I   + LL      I +  P FP Y  S+              
Sbjct: 131 VK--SNEVFVSDGAQSDIS-RLQLLLGSNVTIAVQDPTFPAYIDSSVIIGQTGHFHEKTK 187
Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
           ++  V +    P+  +  DL          T  +   +P NP G V S + L +L + A 
Sbjct: 188 KYQNVVYMPCGPNNSFFPDL-----AMTPRTDVIFFCSPNNPTGYVASRKQLHQLVDFAK 242
Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
              +++I D  Y   +    P     + G+    + + S SK     G RLGW +  D
Sbjct: 243 TNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWSIIPD 300

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 20/237 (8%)
Query: 34  EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + +VISL +GD T                     E ++GY    G    R AIA+     
Sbjct: 55  DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---------- 143
           L   +  +DVFV+ G    I   + ++      I +  P +P Y  S+            
Sbjct: 115 L--GIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTD 171
Query: 144 --RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             ++  + +    P+ G+  DL  +       T  +   +P NP G   + + L +L E 
Sbjct: 172 VQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEF 226
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           A K  ++++ D  Y   +  D P     + G+    +   S SK     G RLGW V
Sbjct: 227 AKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTV 283

>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent Aminotransferase (Lbul_1103) From Lactobacillus Delbrueckii Subsp. At 1.61 A Resolution Length = 391

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 84  RAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA 141
           +A+A++   ++ ++  P + +    SG   AI   +   + PG  IL+  P +  +    
Sbjct: 69  KAVADW--EEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVI 126
Query: 142 AFRHIEVRHFDLL-PDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
                 V   DL+  +  + V+  D+E  LA  +    V  NP NP G  +S + ++++A
Sbjct: 127 EGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIA 186
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLG 255
           E   K + L+I+DE++G LV  D+   P           T+   +K W+V    P     
Sbjct: 187 ELCAKHQVLLISDEIHGDLVLTDEDITPA---------FTVDWDAKNWVVSLISPSXTFN 237
Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDILG 283
                  C +   P +  R ++ F + G
Sbjct: 238 LAALHAACAIIPNPDLRARAEESFFLAG 265

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 90/237 (37%), Gaps = 20/237 (8%)
Query: 34  EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + +VISL +GD T                     E ++GY    G    R AIA+     
Sbjct: 55  DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---------- 143
           L   +  +DVFV+ G    I   + ++      I +  P +P Y  S+            
Sbjct: 115 L--GIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTD 171
Query: 144 --RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             ++  + +    P+ G+  DL  +       T  +   +P NP G   + + L +L E 
Sbjct: 172 VQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEF 226
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           A K  ++++ D  Y   +  D P     + G+    +   S S+     G RLGW V
Sbjct: 227 AKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTV 283

>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With Ll-Dap: External Aldimine Form Length = 432

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 89/237 (37%), Gaps = 20/237 (8%)
Query: 34  EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + +VISL +GD T                     E ++GY    G    R AIA+     
Sbjct: 55  DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---------- 143
           L   +  +DVFV+ G    I   + ++      I +  P +P Y  S+            
Sbjct: 115 L--GIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTD 171
Query: 144 --RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             ++  + +    P+ G+  DL  +       T  +   +P NP G   + + L +L E 
Sbjct: 172 VQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLVEF 226
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           A K  ++++ D  Y   +  D P     + G+    +   S S      G RLGW V
Sbjct: 227 AKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTV 283

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 73  YAPTAGLPLTRRAIAEYLSR--DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN---- 126
           Y  TAGLP  R+A A +L R  D       N++    G  +A+   +  +  P ++    
Sbjct: 62  YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 127 -ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185
            I+ P P + IYE +      E+ HF   P   +  D   I     + T  + + +P NP
Sbjct: 122 AIVSPNPFYQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNP 180
Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPF----VPMGVFGSTVPILTL 240
            G+V      +++ +  +K   ++ +DE Y  + F G+KP         +  S   +L  
Sbjct: 181 SGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLXF 240
Query: 241 GSLSKRWIVPGWRLGWFVTTD 261
            SLS R  VPG R G FV  D
Sbjct: 241 TSLSXRSNVPGLRSG-FVAGD 260

>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase From Clostridium Difficile 630 Crystallized With Magnesium Formate Length = 391

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/328 (20%), Positives = 137/328 (41%), Gaps = 19/328 (5%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--LS 140
             +I  +L R   +K+    +  + G   AI + +  L++    I++  P +  +   + 
Sbjct: 73  NESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVK 132
Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
              R + +     L +  + +D +DIE+   ++    ++ NP NP G V++   L+KL +
Sbjct: 133 NNNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGD 191
Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFV 258
              K    +I+DE++  ++      +PM          T+  +  +K + + G +  + V
Sbjct: 192 ICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVV 251
Query: 259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318
             D     +  K+++      DI  +    + A   S      E + +  L  L+ ++D 
Sbjct: 252 LPDE----KDYKLLDDAFTRIDIKRNNCFSLVATEASY--NNGESWLESFLEYLESNIDF 305
Query: 319 CYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVIILPGTAV 377
               I E +P +    KPEG+   +L ++ S L            L ++  V +  G + 
Sbjct: 306 AIKYINENMPKLKV-RKPEGTY--LLWVDFSALGLSDEELESI--LVQKGKVALNQGNSF 360
Query: 378 GL--KNWLRVTFAVDPYSLEECLDRIKS 403
           G+    + R+  A     LEE L RIK+
Sbjct: 361 GIGGSGYQRINLACPRSMLEEALIRIKN 388

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 89/239 (37%), Gaps = 24/239 (10%)
Query: 34  EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + +VISL +GD T                     E ++GY    G    R AIA+     
Sbjct: 55  DAQVISLGIGDTTEPIPEVITSAXAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
           L   +  +DVFV+ G    I          G+N  I +  P +P Y  S+          
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVXF---GSNVTIAVQDPSYPAYVDSSVIXGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
               ++  + +    P+ G+  DL  +       T  +   +P NP G   + + L +L 
Sbjct: 170 TDVQKYGNIEYXRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           E A K  ++++ D  Y      D P     + G+        S SK     G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWTV 283

>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans Length = 421

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 67/338 (19%), Positives = 134/338 (39%), Gaps = 33/338 (9%)
Query: 84  RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
           +A+ ++  ++  Y +   D+    G   AI +A+   S  G  +L+  P +  Y  +   
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVY--YPFARTI 160
Query: 144 R---HIEVRHFDLLPDKGWEVDLDDIE-SLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
           R   H  V +   + +  +E+D + +E  + D N    ++ +P NP G V+    L K+A
Sbjct: 161 RLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIA 220
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT--LGSLSKRWIVPGWRLGWF 257
           E   K   ++++DE++  L         +    ++    T  L S +K + + G +  + 
Sbjct: 221 ELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFA 280
Query: 258 VTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317
           +  +          + R  +Y  +  +     Q  VP++     +  F+     L++   
Sbjct: 281 IIQNES--------LRRKFQYRQLANN-----QHEVPTVGMIATQAAFQYGKPWLEELKT 327
Query: 318 ICYNKIK------EIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKEESVII 371
           +    IK      E        +PEG+  V L  +   +           KL  E  V++
Sbjct: 328 VIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAI----AQPQLSEKLQNEAKVVL 383
Query: 372 LPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407
             G   G   K + R+  A    +++E L RI S + +
Sbjct: 384 NDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFGK 421

>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate Aminotransferase From Clostridium Acetobutylicum Length = 361

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 20/193 (10%)
Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           G  P        ++I  YL      KL    + + +G ++ I+++++L  +    IL+  
Sbjct: 56  GVYPDVNYRRLNKSIENYL------KLKDIGIVLGNGASEIIELSISLFEK----ILIIV 105
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG---N 188
           P +  YE++A    + V  F  L D+   +D +DI S  D +  +++I NP NP G   N
Sbjct: 106 PSYAEYEINAKKHGVSVV-FSYL-DENMCIDYEDIISKID-DVDSVIIGNPNNPNGGLIN 162
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248
              + H+ KLAE   K KT++I DE +     GD     +G   +   +  + +++K + 
Sbjct: 163 KEKFIHVLKLAEE--KKKTIII-DEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFA 218
Query: 249 VPGWRLGWFVTTD 261
           +PG R G+ +T +
Sbjct: 219 MPGIRFGYGITNN 231

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 139/358 (38%), Gaps = 45/358 (12%)
Query: 67  SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV--AMALLSRPG 124
           +   N Y  +A     R A   +  R    +L  N++  T G  + +    +  L     
Sbjct: 49  THSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQN 108
Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PG 183
             I  P P + IYE +A F    ++   LL     E D     +  +   V LVI+N P 
Sbjct: 109 PTIAYPNPFYQIYEGAAKF----IKAKSLLXPLTKENDFTPSLNEKELQEVDLVILNSPN 164
Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP---FVPMGVFGSTV--PIL 238
           NP G   S + L    + A K   ++I DE Y  +     P        + G+     +L
Sbjct: 165 NPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVL 224
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQAAVPSI- 296
            + SLSKR   PG R G F+  D        +++E+ K +   LG   A  IQ A  +  
Sbjct: 225 VIHSLSKRSSAPGLRSG-FIAGD-------SRLLEKYKAFRAYLGYTSANAIQKASEAAW 276
Query: 297 LQQPDEVFFKKTL-NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLXXXXX 355
           L      FF+    N LK +  I  N       +  P+    S  V L +          
Sbjct: 277 LDDRHAEFFRNIYANNLKLARKIFKN------TLIYPY----SFYVYLPVQ--------N 318
Query: 356 XXXFCFKLAKEESVIILPGTAVGLK----NWLRVTFAVDPYSLEECLDRIKSFYQRHA 409
              F   L + E +I LP   +G      +++R+    D   LE+ L+ I+++ + HA
Sbjct: 319 GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENHA 376

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/295 (20%), Positives = 118/295 (40%), Gaps = 20/295 (6%)
Query: 31  EKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL 90
           E  +  VI+L++GD T                         GY P  GLP  R+ ++E  
Sbjct: 29  ENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDF 88
Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAFRHIEVR 149
            R     +   ++F++ G    +   ++    P   + +  P +P Y +++      E+ 
Sbjct: 89  YRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDPSYPAYLDIARLTGAKEII 144
Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
               L +  +  +  +     D +   L + +P NP G V +   L+ +   A + + L+
Sbjct: 145 ALPCLQENAFFPEFPE-----DTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILI 199
Query: 210 IADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           + D  Y    F   P +P  +F    +    + + S SK     G RLGW V        
Sbjct: 200 LFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYA 257
Query: 267 RKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSV 316
               V++  +++    F+    PA     A  SIL Q + + ++++  +LL++++
Sbjct: 258 DGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKAL 312

>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola Contains A Pyridoxal 5'-Phosphate Cofactor Length = 399

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           ++ + +++     + +  + +  T+G   A+  A+   ++PG  +++  P +  + ++  
Sbjct: 72  KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK 131
Query: 143 FRHIEVRHFDLLPDKGW-EVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
            +  ++   +LL   G+  +D   +E L+ D+N  AL+  +P NP G V+    LQK+ +
Sbjct: 132 NQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKD 191
Query: 201 TANKLKTLVIADEVYGHLV 219
              K   ++ +DE++  L+
Sbjct: 192 IVLKSDLMLWSDEIHFDLI 210

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R+ +A++      Y+L   ++  T+G  + I++   +L     N +   P F  Y  +A 
Sbjct: 73  RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
               EVR   LL D   E DL+   +  D+ T  + I NP NP GN      +Q   +  
Sbjct: 127 IEGAEVREIPLLQD--GEHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184
Query: 203 NKLKTLVIADEVY 215
                LV+ DE Y
Sbjct: 185 PS-DVLVVLDEAY 196

>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A Modulator In Mal Gene Expression Length = 390

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           AIA + S      +    V         +   +   S  G  +++  P +      A ++
Sbjct: 72  AIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAY-----DAFYK 126
Query: 145 HIEVRHFDLLP------DKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQK 197
            IE     ++P        GW  D+  +E+ LA      +++ +P NP G V++   L+ 
Sbjct: 127 AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI 186
Query: 198 LAETANKLKTLVIADEVYGHLVFGDKPFVPM-GVFGSTVPILTLGSLS 244
           +A+   +    VI+DE++  +V+G++P +P   V      +LT GS S
Sbjct: 187 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKS 234

>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131) From Thermotoga Maritima Msb8 At 1.82 A Resolution Length = 425

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           Y+ T G P+ ++ I + L R      L  +++  T G  QA+D+   L     +  +L  
Sbjct: 81  YSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140
Query: 132 PGFPIYELSA--AFRHIEVRHFDLLPDKGWEVDLDDIE---SLADQN------TVALVII 180
           P +    L A  AFR   + +F ++P +    DL+ +E   S  D+N          V+ 
Sbjct: 141 PAY----LGAINAFRQY-LANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVS 195
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           N  NP G   S +  + L E A K    ++ D+ YG L +  +   P+   G    ++ L
Sbjct: 196 NFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLL 255
Query: 241 GSLSKRWIVPGWRLG 255
            + SK  + PG R+G
Sbjct: 256 NTFSK-VLAPGLRIG 269

>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 43/259 (16%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F  G  P F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
           TF Q  +  +L +  E  F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315

>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase (Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A Resolution Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 29/173 (16%)
Query: 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV----RHFDLLPDK 157
           +V + +G  + I       +RPGA +  P PGF  Y  SA F  +E        D   D+
Sbjct: 87  EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRADFTLDR 146
Query: 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVY 215
           G       + + A+     + +  P NP GN++     + +   A     ++LV+ DE Y
Sbjct: 147 GAX-----LAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAY 201
Query: 216 GHLVFGDKPFVP------MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
                  +PF        +  FG+ +   T+  L     + G RLG +V  DP
Sbjct: 202 -------QPFAQESWXSRLTDFGNLLVXRTVSKLG----LAGIRLG-YVAGDP 242

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R  +A Y+++     +T ++++  +G  + +   +     PG   L  +P + ++ + A 
Sbjct: 75  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             H E        D  + +D+D  +E +  +    + +  P NP G+V S   ++++   
Sbjct: 135 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           A     +VI DE Y    F   P     +      ++   ++SK +   G RLG+FV
Sbjct: 193 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFV 244

>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 43/259 (16%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F  G  P F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
           TF Q  +  +L +  E  F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R  +A Y+++     +T ++++  +G  + +   +     PG   L  +P + ++ + A 
Sbjct: 72  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 131
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             H E        D  + +D+D  +E +  +    + +  P NP G+V S   ++++   
Sbjct: 132 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 189
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           A     +VI DE Y    F   P     +      ++   ++SK +   G RLG+FV
Sbjct: 190 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFV 241

>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus Length = 404

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 129/337 (38%), Gaps = 29/337 (8%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPR 131
           Y    G    ++AI ++  R     L   D V +  G    +      +  PG  +LLP 
Sbjct: 81  YGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPD 140
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           PG+  Y         +    +L P   +  D   ++S     T  + +  P NP G+  +
Sbjct: 141 PGYTDYLAGVLLADGKPVPLNLEPPH-YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTAT 199
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFGSTVPILTLGSLSKRWIVP 250
            +   +         T ++ D  YG   F  K P +     G  V I  + SLSK +   
Sbjct: 200 KEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAI-EIYSLSKGYNXS 258
Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATF--IQAAVPSILQQPDEVFFKKT 308
           G+R+G+ V             ++ +KKY     +   F  +Q A    L   D+ F ++ 
Sbjct: 259 GFRVGFAVGNK--------DXIQALKKY-QTHTNAGXFGALQDAAIYALNHYDD-FLEEQ 308
Query: 309 LNLLKQSVDICYNKI--KEIPCISCPHKPEGSMAVMLKLNLSLLXXXXXXXXFCFKLAKE 366
            N+ K   D     +   ++P +      +G + V L+              F   L +E
Sbjct: 309 SNVFKTRRDRFEAXLAKADLPFVHA----KGGIYVWLE-----TPPGYDSEQFEQFLVQE 359
Query: 367 ESVIILPGTAVGLKN--WLRVTFAVDPYSLEECLDRI 401
           +S+++ PG   G     ++R++ A+D   L+E   R+
Sbjct: 360 KSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRL 396

>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 43/259 (16%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
           TF Q  +  +L +  E  F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315

>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase Ii In Complex With Kynurenine Length = 425

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 43/259 (16%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
           TF Q  +  +L +  E  F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315

>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex Length = 425

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 107/259 (41%), Gaps = 43/259 (16%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
           TF Q  +  +L +  E  F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315

>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 425

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 43/259 (16%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G  +   +   +    I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQAAVPSILQQPDEVFF 305
           TF Q  +  +L +  E  F
Sbjct: 297 TFNQLMISQLLHEWGEEGF 315

>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 427

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 43/259 (16%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 76  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 135
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 136 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDS-----LRDILSRWKPEDAKNPQK 190
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ 
Sbjct: 191 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 250
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G  +   +   +    I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 251 MDVDGRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 298
Query: 287 TFIQAAVPSILQQPDEVFF 305
           TF Q  +  +L +  E  F
Sbjct: 299 TFNQLMISQLLHEWGEEGF 317

>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase (Ttha0342) From Thermus Thermophilus Hb8 Length = 376

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160
            +     G  + +   +  L+ P   +LLP   +P Y    A R   +R F L+P +  E
Sbjct: 88  REALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSY--FGAARVASLRTF-LIPLR--E 142
Query: 161 VDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217
             L D++++ +   +    L++  P NP G V  + + ++    A K    +I D  Y  
Sbjct: 143 DGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVD 202
Query: 218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
            V+  +   P+ + G+   ++ L SLSK + + G+RLG+ + ++
Sbjct: 203 QVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE 246

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 8/177 (4%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R  +A Y+++     +T ++++  +G  + +   +     PG   L  +P + ++ + A 
Sbjct: 75  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             H E        D  + +D+D  +E +  +    + +  P NP G+V S   ++++   
Sbjct: 135 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           A     +VI DE Y    F   P     +      ++   ++S  +   G RLG+FV
Sbjct: 193 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFV 244

>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas Reinhardtii Length = 449

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 26/248 (10%)
Query: 26  QSVDDEKN-EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRR 84
           +    EKN + K+ISL +GD T                     E ++GY    G    R 
Sbjct: 59  RKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALRE 118
Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAF 143
           A+A             +++F++ G    I  + M   S+P   + +  P +P+Y  ++  
Sbjct: 119 AVASTFYGHA--GRAADEIFISDGSKCDIARIQMMFGSKP--TVAVQDPSYPVYVDTSVM 174
Query: 144 RHIEVRH----FDLL------PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193
             +   H    FD +      PD  +  DL        + T  +   +P NP G   +  
Sbjct: 175 MGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRA 229
Query: 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVP 250
            L +L   A K  ++++ D  Y   +    P  P  ++   G+    +   S SK     
Sbjct: 230 QLTELVNFARKNGSILVYDAAYALYI--SNPDCPKTIYEIPGADEVAIETCSFSKYAGFT 287
Query: 251 GWRLGWFV 258
           G RLGW V
Sbjct: 288 GVRLGWTV 295

>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase Length = 544

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 32/201 (15%)
Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVTSGCTQAI-----DVAMALLSRPGAN 126
           P   L ++ + + +Y+ R++     P    D+F   G T A+      + ++ L + G  
Sbjct: 136 PPRMLTVSEQIVRQYIVREMAGGAVPPESVDLFAVEGGTAAMAYIFESLRISGLLKAGDK 195
Query: 127 ILLPRPGF-PIYELSAAFRHIEVRHFDLL-------PDKGWEVDLDDIESLADQNTVALV 178
           + +  P F P  E+       E+  +DL        PD GW+    +++ L D +     
Sbjct: 196 VAIGMPVFTPYIEIP------ELAQYDLKEVPIHADPDNGWQYSDAELDKLKDPDVKIFF 249
Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLK--TLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
            +NP NP       + L ++     + +   L++ D+VYG   F D+         S  P
Sbjct: 250 CVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYG--TFADE----FQSLFSVCP 303
Query: 237 ILTL--GSLSKRWIVPGWRLG 255
             TL   S SK +   GWRLG
Sbjct: 304 RNTLLVYSFSKYFGATGWRLG 324

>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase (Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15 A Resolution Length = 407

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220
           +DL  +E          +  NP NP G VYS + + ++A  A +    VIAD++Y  L +
Sbjct: 167 LDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRY 226
Query: 221 GDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLG 255
               +  +    +     ++T+   S    + G+RLG
Sbjct: 227 AGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	415
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	1e-169
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	1e-161
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	8e-72
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	5e-71
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	2e-70
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	2e-69
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	3e-59
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	2e-58
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	4e-58
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	6e-58
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	1e-57
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	5e-57
3ele_A	398	Amino transferase; RER070207001803, structural gen	6e-56
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	2e-54
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	1e-52
3nra_A	407	Aspartate aminotransferase; structural genomics, j	2e-52
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	2e-52
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	2e-52
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	4e-52
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	4e-51
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	1e-50
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	1e-49
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	3e-49
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	5e-49
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	6e-48
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	2e-47
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	6e-47
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	8e-47
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	2e-46
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	1e-45
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	3e-45
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	5e-45
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	2e-44
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	2e-43
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	7e-43
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	2e-41
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	3e-40
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	5e-39
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	8e-38
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	1e-36
1vp4_A	425	Aminotransferase, putative; structural genomics, j	3e-36
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	4e-36
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	2e-35
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	4e-34
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	4e-33
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	2e-29
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	2e-26
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	4e-25
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	9e-25
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	1e-24
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	3e-23
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	3e-22
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	3e-22
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	5e-22
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	6e-22
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	1e-21
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	1e-21
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	1e-21
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	2e-21
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	5e-21
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	9e-21
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	3e-20
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	3e-20
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	3e-19
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	8e-19
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	1e-17
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	3e-17
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	5e-16
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-08
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	2e-04

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  479 bits (1236), Expect = e-169
 Identities = 148/380 (38%), Positives = 224/380 (58%), Gaps = 3/380 (0%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
               K +ISL++GDPTV     T    T+A+ +AL S K+NGYAP+ G   +R  IA Y 
Sbjct: 50  PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYY 109

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
                  L   DV +TSGC+QAID+ +A+L+ PG NIL+PRPGF +Y+  A    IEV+ 
Sbjct: 110 HCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKL 168

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           ++LLP+K WE+DL  +E L D+ T  L++ NP NPCG+V+S +HLQK+   A +    ++
Sbjct: 169 YNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPIL 228

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           ADE+YG +VF D  + P+    + VPIL+ G L+KRW+VPGWRLGW +  D   +F   +
Sbjct: 229 ADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIF-GNE 287

Query: 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330
           + + + K    +  P T +Q A+ SIL +    F+  TL+ LK + D+CY  +  IP + 
Sbjct: 288 IRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR 347

Query: 331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVD 390
              +P G+M +M+ + +    +  +D++F  +L  E+SV  LP T     N++RV   V 
Sbjct: 348 PV-RPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVP 406

Query: 391 PYSLEECLDRIKSFYQRHAK 410
              + E   RI+ F ++H  
Sbjct: 407 EVMMLEACSRIQEFCEQHYH 426

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  459 bits (1183), Expect = e-161
 Identities = 126/397 (31%), Positives = 207/397 (52%), Gaps = 13/397 (3%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83
           +  +     + K +I L++GDPT+     T+    + + EA+ S++ NGY PT G P  R
Sbjct: 22  VSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAR 81

Query: 84  RAIAEYLSR------DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY 137
            A+A +         +L   +  ++V + SG +  I +A+  +   G   L+P+PGFP Y
Sbjct: 82  EAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHY 141

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197
           E       I +  ++  P+  WE DLD+I  L D  T  L++ NP NPCG+ +S +H++ 
Sbjct: 142 ETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVED 201

Query: 198 LAETANKLKTLVIADEVYGHLVFGDK----PFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253
           +   A +L+  + +DE+Y  +VF  K     F  +  F +TVP + LG  +K  +VPGWR
Sbjct: 202 IVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWR 261

Query: 254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK 313
           LGW +  DP G    P  +E +K+   ++  P T +QAA+   L    +    + +  ++
Sbjct: 262 LGWLLYVDPHG--NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIE 319

Query: 314 QSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP 373
           +S    YN I E   ++    P G+M +M +++L    DI  D++F  KL +EE+V +LP
Sbjct: 320 ESAMYLYNHIGECIGLAP-TMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLP 378

Query: 374 GTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           GT      + R+T         E ++RIK+F QRHA 
Sbjct: 379 GTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHAA 415

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  230 bits (588), Expect = 8e-72
 Identities = 112/387 (28%), Positives = 179/387 (46%), Gaps = 20/387 (5%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           EK   KVI L +GDP     F       EA  +A+  E  N Y  + GLP  R+AI E  
Sbjct: 34  EKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAI-KEGHNYYGDSEGLPELRKAIVERE 91

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     +TP+DV VT+  T+A+ +    L  PG  IL+P P +P Y     F   +   
Sbjct: 92  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVE 151

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           +  + ++ W+ D+DDI       T A+ +INP NP G +Y  + L+++   A + +  VI
Sbjct: 152 YRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVI 211

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DE+Y  + +  +  +  G     VP++ +  LSK +   GWRLG+    DP        
Sbjct: 212 SDEIYDLMTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDP------EN 264

Query: 271 VVERMKKYFDILGD----PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI 326
            +  +++  D L      P T  Q A  + L  P + + K+ +  LK+  D  Y ++ EI
Sbjct: 265 KLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMD-YLKEYMKKLKERRDYIYKRLNEI 323

Query: 327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK--NWLR 384
           P IS   KP+G+  +  K+ +       +D +F   +     V+ + G+  G       R
Sbjct: 324 PGISTT-KPQGAFYIFPKIEVGP---WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFR 379

Query: 385 VTFAVDPYSLEECLDRIKSFYQRHAKQ 411
             F      LEE +DR + F +   K+
Sbjct: 380 AVFLPPIEILEEAMDRFEKFMKERLKE 406

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score =  230 bits (589), Expect = 5e-71
 Identities = 84/422 (19%), Positives = 172/422 (40%), Gaps = 50/422 (11%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVA--EALLSEKFNGYAPTAGLPLTRRAIAEYLS- 91
           ++V++L      + S          A    +A        Y+ + G+   R  +A Y++ 
Sbjct: 85  RQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITR 144

Query: 92  RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG----ANILLPRPGFPIYELSAAFRHIE 147
           RD      P+++++T+G +  I   + +L   G      +++P P +P+Y    +     
Sbjct: 145 RDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAI 204

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTV-----ALVIINPGNPCGNVYSYQHLQKLAETA 202
             ++ L  +  W ++++++     +         L IINPGNP G V S + ++ +   A
Sbjct: 205 QVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFA 264

Query: 203 NKLKTLVIADEVYGHLVF-GDKPFVPM--------GVFGSTVPILTLGSLSKRWIVP-GW 252
            + K  ++ADEVY   V+  D  F             + S V + +  S SK ++   G+
Sbjct: 265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGY 324

Query: 253 RLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV--------- 303
           R G+    +       P++  ++ K   +   P    QAA+  ++  P            
Sbjct: 325 RGGYMEVINL-----HPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSR 379

Query: 304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD-------DIIDD 356
             +  L  L +   +  +   ++P I C +  +G+M    ++ +            +  D
Sbjct: 380 EKESVLGNLAKKAKLTEDLFNQVPGIHC-NPLQGAMYAFPRIFIPAKAVEAAQAHQMAPD 438

Query: 357 IDFCFKLAKEESVIILPGTAVGLKNW---LRVTFAVDPYSLEECLDRIKSFYQRHAKQLQ 413
           + +C KL +E  + ++PG+  G +      R+T       L+  L ++K F   H   L+
Sbjct: 439 MFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDF---HINFLE 495

Query: 414 RY 415
           +Y
Sbjct: 496 KY 497

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score =  229 bits (585), Expect = 2e-70
 Identities = 80/410 (19%), Positives = 155/410 (37%), Gaps = 45/410 (10%)

Query: 42  MGDPTVHSCFHT-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP 100
           +    + + F   +    + +   +       Y+ + G+   R AIA  ++    +    
Sbjct: 98  LQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANA 157

Query: 101 NDVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159
           +D+F+T G +  + + M  L+      IL+P P +P+Y  S A     +  + L    GW
Sbjct: 158 DDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGW 217

Query: 160 EVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
            ++  D++   +       N  ALV+INPGNP G V + ++   + +       +++ADE
Sbjct: 218 GLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADE 277

Query: 214 VYGHLVFGD-KPFV-------PMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCG 264
           VY   ++ D K F         +G     +P+++  S+SK +    G R G+F  T    
Sbjct: 278 VYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGF-- 335

Query: 265 MFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV---------FFKKTLNLLKQS 315
                 V E++ K   +        Q     ++  P                 L  L + 
Sbjct: 336 ---SAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARR 392

Query: 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD-------DIIDDIDFCFKLAKEES 368
                +   ++  I+C  + EG+M V  ++ L           +   D  +  +L +   
Sbjct: 393 AKALEHAFNKLEGITCN-EAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTG 451

Query: 369 VIILPGTAVGLKNW---LRVTFAVDPYSLEECLDRIKSFYQRHAKQLQRY 415
           ++++PG+  G        R T       +   + R   F   H   +  Y
Sbjct: 452 IVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVF---HEAFMSEY 498

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  223 bits (570), Expect = 2e-69
 Identities = 81/379 (21%), Positives = 160/379 (42%), Gaps = 31/379 (8%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
              + SL + +      F  +    E   + L       Y    G P  ++++++  +  
Sbjct: 26  GVSISSLTLEEL-----FALSGTNPEDFYKKLQ-GTKLNYGWIEGSPAFKKSVSQLYTG- 78

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
               + P  +  T+G T A  + +  L  PG +++   P +            EV  + +
Sbjct: 79  ----VKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQI 134

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
             + GW  DL+ +  L    T  + I N  NP G V    +L++L E A+++   +++DE
Sbjct: 135 EEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDE 194

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           VY      D P +   V+   +    + SLSK + +PG R+GW             +V +
Sbjct: 195 VYRSFSELDVPSII-EVYDKGI---AVNSLSKTYSLPGIRIGWVAA--------NHQVTD 242

Query: 274 RMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332
            ++ Y D  +     F        L    E   ++  ++L++++ I    I+E P +S  
Sbjct: 243 ILRDYRDYTMICAGVFDDLVAQLALAHYQE-ILERNRHILEENLAILDQWIEEEPLVSY- 300

Query: 333 HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPY 392
            +P       +K+ +      +   DFC +L +E  V+++PG       ++R+ FA +  
Sbjct: 301 IRPAVVSTSFVKIAV-----DMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQE 355

Query: 393 SLEECLDRIKSFYQRHAKQ 411
           +L + L+++  F +R  K+
Sbjct: 356 TLIKGLEKLSQFLRRFDKE 374

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  198 bits (505), Expect = 3e-59
 Identities = 60/403 (14%), Positives = 123/403 (30%), Gaps = 40/403 (9%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
            K   + MG P          +  E   + L     + Y    GLP  ++  + +    +
Sbjct: 44  TKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFV 99

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSR----PGANILLPRPGFPIYELSAAFRHIEVRH 150
              +       T G  Q   V+  + +R         L   PGF + +L       +   
Sbjct: 100 NIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFES 159

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           FDL   +G ++       L      +++  NP NP     + + L+ + E A K   +VI
Sbjct: 160 FDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVI 219

Query: 211 ADEVYGHLVFGDKPFVPMG-VFGSTVP-----ILTLGSLSKRWIVPGWRLGWFV------ 258
            D  Y  + F      P   ++  +V       +   S SK +   G R+G  +      
Sbjct: 220 EDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLY 279

Query: 259 ---TTDPCGMFRKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDE--VFFKKTLNL 311
                D    F + +  E +     + +        Q  + ++L+  ++    F+ ++  
Sbjct: 280 EREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIE 339

Query: 312 LKQSVDICYNKIKE-----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE 366
             +   I      +     +      ++P            ++    +D      K  + 
Sbjct: 340 YGRKARIMKKMFLDNGFNIVYDKDG-NEPLADGFYF-----TVGYKGMDSSKLIEKFVRY 393

Query: 367 ESVIILPGTAVGLK--NWLRVTFAVDPYSLEECLDRIKSFYQR 407
               I   T    +       T  +      +   R++     
Sbjct: 394 GMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  195 bits (498), Expect = 2e-58
 Identities = 102/405 (25%), Positives = 156/405 (38%), Gaps = 48/405 (11%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
                ++L  G P             +A  +A+ +   N Y P  G    RRAIA    R
Sbjct: 23  TRIGAVNLGQGFPD----EDGPPKMLQAAQDAI-AGGVNQYPPGPGSAPLRRAIAAQRRR 77

Query: 93  DLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151
                  P  +V VT G T+AI  A+  L  PG+ +LL  P +  Y    A         
Sbjct: 78  HFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTV 137

Query: 152 DL-LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            L    +G+ +D D +       T AL+I +P NP G V S   L  +AE A     +VI
Sbjct: 138 PLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVI 197

Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
            DEVY HLVF     +P+    G+   T+   T+ S +K +   GW++GW     P    
Sbjct: 198 TDEVYEHLVFDHARHLPLAGFDGMAERTI---TISSAAKMFNCTGWKIGWACG--P---- 248

Query: 267 RKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK 324
              +++  ++    +      A F Q AV   L   D  +     N L+   D     + 
Sbjct: 249 --AELIAGVRAAKQYLSYVGGAPF-QPAVALALDTEDA-WVAALRNSLRARRDRLAAGLT 304

Query: 325 EI--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA------ 376
           EI        H   G+  +    +   L    D  +FC  L ++  V  +P +A      
Sbjct: 305 EIGFAV----HDSYGTYFLC--ADPRPLGY-DDSTEFCAALPEKVGVAAIPMSAFCDPAA 357

Query: 377 -------VGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQR 414
                      + +R TF     +L+E + R+    +R A  + R
Sbjct: 358 GQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERPATGVPR 402

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  193 bits (494), Expect = 4e-58
 Identities = 84/386 (21%), Positives = 149/386 (38%), Gaps = 34/386 (8%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E+  +++I + +G P           A EA+A++L      GY    GLP  R+ IA   
Sbjct: 27  EEAGRRIIHMEVGQPG----TGAPRGAVEALAKSL-ETDALGYTVALGLPALRQRIARLY 81

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
                  L P  V +T G +    +A   L   G  + +  PG+P Y        +    
Sbjct: 82  GEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVD 141

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
               P+   +    D   L   +   L++ +P NP G +  +  +  L E A       I
Sbjct: 142 LPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFI 198

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DE+Y  + +  K    + +         + S SK + + GWR+GW V   P        
Sbjct: 199 SDEIYHGIEYEAKAVTALELTDECY---VINSFSKYFSMTGWRVGWMVV--P------ED 247

Query: 271 VVERMKK---YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP 327
            V  +++      I        Q A  + L    E+  +  L++ K +  +   ++ +  
Sbjct: 248 QVRVVERIAQNMFI--CAPHASQVAALAALDCDAEL--QANLDVYKANRKLMLERLPKAG 303

Query: 328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLR 384
                  P+G+  V    ++S L D  D   F  ++ ++  V + PG           LR
Sbjct: 304 FTRIA-PPDGAFYVY--ADVSDLTD--DSRAFAAEILEKAGVAVTPGLDFDPERGAGTLR 358

Query: 385 VTFAVDPYSLEECLDRIKSFYQRHAK 410
            ++A     +EE LDR+++F Q   +
Sbjct: 359 FSYARATADIEEGLDRLEAFMQARGE 384

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  193 bits (493), Expect = 6e-58
 Identities = 85/383 (22%), Positives = 158/383 (41%), Gaps = 35/383 (9%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
            + + I+L+ G P     F       E +A  + ++  N YAP  G+   R AIA+   R
Sbjct: 28  QQHQAINLSQGFPD----FDGPRYLQERLAHHV-AQGANQYAPMTGVQALREAIAQKTER 82

Query: 93  DLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151
              Y+    +D+ VT+G T+A+  A+  L R G  ++   P +  Y  + A     V+  
Sbjct: 83  LYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRM 142

Query: 152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
            L P   + VD  +  +L  + T  +++  P NP   V+       L +     +  VI+
Sbjct: 143 ALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVIS 201

Query: 212 DEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
           DEVY H+ F  +    +     +    V    + S  K + + GW++G+ V   P     
Sbjct: 202 DEVYEHINFSQQGHASVLAHPQLRERAV---AVSSFGKTYHMTGWKVGYCVA--P----- 251

Query: 268 KPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325
              +   ++K   +          Q A+  +L+   E  +    +  +Q  DI  N + E
Sbjct: 252 -APISAEIRKVHQYLTFSVNTPA-QLALADMLRAEPE-HYLALPDFYRQKRDILVNALNE 308

Query: 326 IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KN 381
              +      EG+  ++  ++ S +   +DD++FC  L +E  V  +P +          
Sbjct: 309 SR-LEI-LPCEGTYFLL--VDYSAVST-LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHK 363

Query: 382 WLRVTFAVDPYSLEECLDRIKSF 404
            +R+ FA    +L    +R++  
Sbjct: 364 LIRLCFAKKESTLLAAAERLRQL 386

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  194 bits (494), Expect = 1e-57
 Identities = 74/413 (17%), Positives = 156/413 (37%), Gaps = 45/413 (10%)

Query: 29  DDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG------YAPTAGLPLT 82
            +  N   +I + + +  +      + +A    A A      +       +    GLP  
Sbjct: 32  HEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAF 91

Query: 83  RRAIAEYLS--RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS 140
           ++A+ ++++  R       PN + +T+G T A +  +  L+ PG  +L+P P +P ++  
Sbjct: 92  KKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRD 151

Query: 141 AAFRH-IEVRHFDLLPDKGWEVDLDDIES------LADQNTVALVIINPGNPCGNVYSYQ 193
             +R  +E+         G+++    +E         +     +++ NP NP G   +  
Sbjct: 152 LKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRN 211

Query: 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----------ILTLGSL 243
            L  L          +I+DE+Y    F    F+ +                  +  + SL
Sbjct: 212 ELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL 271

Query: 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--YFDILGDPATFIQAAVPSILQQPD 301
           SK   +PG+R+G   +           VV    K   F ++      + +A+ S  +   
Sbjct: 272 SKDLGLPGFRVGAIYS-------NDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTK 324

Query: 302 EVFFKKTLNLLKQSVDICYNKIKE--IPCISCPHKPEGSMAVMLKL-NLSLLDDIIDDID 358
             +  +    LKQ      + +++  I C          +   + + +L   +    +++
Sbjct: 325 N-YIAENHKRLKQRQKKLVSGLQKSGISC----LNGNAGLFCWVDMRHLLRSNTFEAEME 379

Query: 359 FCFKLAKEESVIILPGTAVGLK--NWLRVTFA-VDPYSLEECLDRIKSFYQRH 408
              K+  E  + I PG++       W RV FA +   +L+  + R+K+F   +
Sbjct: 380 LWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEY 432

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  192 bits (489), Expect = 5e-57
 Identities = 75/410 (18%), Positives = 149/410 (36%), Gaps = 42/410 (10%)

Query: 29  DDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEAL-----LSEKFNGYAPTAGLPLTR 83
              KN   VI + + +  +        +                +    +    GLP  R
Sbjct: 30  HPLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFR 89

Query: 84  RAIAEYLSR--DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA 141
           +AIA+++ +      +  P  V +  G T A +  +  L+ PG   L+P P +P +    
Sbjct: 90  KAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDL 149

Query: 142 AFRH-IEVRHFDLLPDKGWEVDLDDIES------LADQNTVALVIINPGNPCGNVYSYQH 194
            +R  +++          +++    ++        ++     L++ NP NP G       
Sbjct: 150 RWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDT 209

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--------ILTLGSLSKR 246
           L+ +    N+    ++ DE+Y   VF    FV +                +  + SLSK 
Sbjct: 210 LKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD 269

Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--YFDILGDPATFIQAAVPSILQQPDEVF 304
             +PG+R+G   + +         VV   +K   F ++     +  AA+ S  +  D  F
Sbjct: 270 MGLPGFRVGIIYSFN-------DDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDN-F 321

Query: 305 FKKTLNLLKQSVDICYNKIKE--IPCISCPHKPEGSMAVMLKL-NLSLLDDIIDDIDFCF 361
            +++   L +      N ++   I C     K    +   + L  L        ++    
Sbjct: 322 LRESAMRLGKRHKHFTNGLEVVGIKC----LKNNAGLFCWMDLRPLLRESTFDSEMSLWR 377

Query: 362 KLAKEESVIILPGTAVGLK--NWLRVTFAV-DPYSLEECLDRIKSFYQRH 408
            +  +  + + PG++   +   W RV FA  D  +++  L RI+ F    
Sbjct: 378 VIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  188 bits (480), Expect = 6e-56
 Identities = 89/401 (22%), Positives = 167/401 (41%), Gaps = 54/401 (13%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEAL---LSEKFNGYAPTAGLPLTRRAIA 87
              ++ V   ++G+P+         +  + + E +    S   +GY    G   TR AIA
Sbjct: 31  IVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIA 86

Query: 88  EYLSRDLPYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHI 146
           E+L+         +++++T G   ++ +   AL S      +   P FP Y++       
Sbjct: 87  EFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGA 146

Query: 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-- 204
            +       +  +++D D +E   + +T  ++I +P NP G VYS + ++KL++   K  
Sbjct: 147 RLVEVPADTE-HFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKS 205

Query: 205 ----LKTLVIADEVYGHLVFGDK--PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
                   +IADE Y  +V+     PFV    + +T+      S SK   +PG R+G+ +
Sbjct: 206 KEIGRPIFIIADEPYREIVYDGIKVPFVT-KYYDNTL---VCYSYSKSLSLPGERIGYVL 261

Query: 259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ---------QPDEVFFKKTL 309
                      +V ++ + Y  + G          PS+ Q           D   +K+  
Sbjct: 262 V--------PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATGDINAYKENR 313

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
           +LL       Y  +  I    C  KP+G+  + +K          D   FC + AKEE V
Sbjct: 314 DLL-------YEGLTRIG-YHC-FKPDGAFYMFVKAL------EDDSNAFC-EKAKEEDV 357

Query: 370 IILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
           +I+     G   W+R+++ VD   ++  +   +  Y+++ K
Sbjct: 358 LIVAADGFGCPGWVRISYCVDREMIKHSMPAFEKIYKKYNK 398

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  184 bits (470), Expect = 2e-54
 Identities = 85/387 (21%), Positives = 159/387 (41%), Gaps = 34/387 (8%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +K   ++  L +G P       T  V  E + E     +   Y+ +AG+   R A A Y 
Sbjct: 39  KKRGVRIHHLNIGQPD----LKTPEVFFERIYEN--KPEVVYYSHSAGIWELREAFASYY 92

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     + P +V VT+G ++AI  + A+++ PG  IL+  P +  Y   A    +++  
Sbjct: 93  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIP 152

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
                ++G+ +   ++ES  ++ T  +V+ NP NP G VY    ++ L E A +    +I
Sbjct: 153 VTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLI 211

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
            DEVY  +VF  +    + +    V  + + S+SK++   G R+G  +T       R  +
Sbjct: 212 VDEVYSEIVFRGEFASALSIESDKV--VVIDSVSKKFSACGARVGCLIT-------RNEE 262

Query: 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330
           ++    K       P    Q     +L   D  FF       ++ V+    K++E     
Sbjct: 263 LISHAMKLAQGRLAPPLLEQIGSVGLLNLDDS-FFDFVRETYRERVETVLKKLEEHGLKR 321

Query: 331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE-----ESVIILPGTAVGL-----K 380
              KP G+  +  +L       + D  +F   +  +     E+ ++ P     L     K
Sbjct: 322 FT-KPSGAFYITAELP------VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGK 374

Query: 381 NWLRVTFAVDPYSLEECLDRIKSFYQR 407
             +R+   ++   L   +D +    + 
Sbjct: 375 KEIRIACVLEKDLLSRAIDVLMEGLKM 401

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  180 bits (459), Expect = 1e-52
 Identities = 84/408 (20%), Positives = 154/408 (37%), Gaps = 55/408 (13%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
            +  V++L  G P             E +++A   +  N Y    G P   +A++    +
Sbjct: 21  ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGK 76

Query: 93  DLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151
               ++ PN ++ V  G   ++  ++  L  PG  +++  P +  YE             
Sbjct: 77  IYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFI 136

Query: 152 DLLPDK---------GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
            L              W  D  ++ES     T A+++  P NP G VY+ Q LQ +A+  
Sbjct: 137 PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLC 196

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
            K  TL I+DEVY  LV+     V +    G++  T+   T+GS  K + V GW+LGW +
Sbjct: 197 VKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTI---TIGSAGKTFSVTGWKLGWSI 253

Query: 259 TTDPCGMFRKPKVVERMKKY--FDILGDPATFIQAAV-------PSILQQPDEVFFKKTL 309
              P        +++ ++               QAA+          +  P+  +F    
Sbjct: 254 G--P------AHLIKHLQTVQQNSFYTCATPL-QAALAEAFWIDIKRMDDPEC-YFNSLP 303

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGS---MAVMLKLNLSLLD---DIIDDIDFCFKL 363
             L+   D     +  +  +     P+G    +A +  L   L D   D   D  F   +
Sbjct: 304 KELEVKRDRMVRLLNSVG-LKP-IVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWM 361

Query: 364 AKEESVIILPGTA-------VGLKNWLRVTFAVDPYSLEECLDRIKSF 404
            K + +  +P +A          +  +R  F     +L+   +  +++
Sbjct: 362 TKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAW 409

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  179 bits (457), Expect = 2e-52
 Identities = 71/390 (18%), Positives = 139/390 (35%), Gaps = 33/390 (8%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
             E + +  + GD   H    T        A    S     Y    G    R  +A  L+
Sbjct: 36  PIEGRPVDFSHGDVDAHE--PTPGAFDLFSAGVQ-SGGVQAYTEYRGDLGIRDLLAPRLA 92

Query: 92  RD--LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-----R 144
                P     + + +T G   A+ +A+A     G  + + +P +        F      
Sbjct: 93  AFTGAPVD-ARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMV 151

Query: 145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204
            +++ +     +    +DL  +E          +  NP NP G VYS + + ++A  A +
Sbjct: 152 PVQLDYVSA-DETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAAR 210

Query: 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTTDP 262
               VIAD++Y  L +    +  +    +     ++T+   SK   + G+RLG       
Sbjct: 211 YGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGV------ 264

Query: 263 CGMFRKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320
              F    ++ RM+K      L   A + QA +     +    + +  +   +   D   
Sbjct: 265 --AFGSRAIIARMEKLQAIVSLR-AAGYSQAVLRGWFDEAPG-WMEDRIARHQAIRDELL 320

Query: 321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL- 379
           + ++    +     P+    +     L  L   +   +F   L  +  V++ PGT     
Sbjct: 321 HVLRGCEGVFAR-TPQAGSYLF--PRLPKL--AVAPAEFVKILRLQAGVVVTPGTEFSPH 375

Query: 380 -KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408
             + +R+ F+ D  +      RI +  +R+
Sbjct: 376 TADSVRLNFSQDHEAAVAAARRIVTLVERY 405

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  178 bits (455), Expect = 2e-52
 Identities = 98/392 (25%), Positives = 162/392 (41%), Gaps = 55/392 (14%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
                ++L  G P+            EAV  AL   + + YAP AGLP  R A+AE  + 
Sbjct: 23  QRLGAVNLGQGFPS----NPPPPFLLEAVRRAL--GRQDQYAPPAGLPALREALAEEFAV 76

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-----RHIE 147
           +      P  V VTSG T+A+ V +  L  PG  +++  P F +Y   A       R + 
Sbjct: 77  E------PESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVR 130

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           +     L  +G+ +DL  +E      T AL++  P NP G V+  + L+ +A  A     
Sbjct: 131 LD----LTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDL 186

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265
            +I+DEVY  L +G++P           P    T+GS  KR    G+R+GW V   P   
Sbjct: 187 FLISDEVYDELYYGERPRRLR----EFAPERTFTVGSAGKRLEATGYRVGWIVG--P--- 237

Query: 266 FRKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNK 322
               + + R+     +     P T +QA V   L+      F++      ++  D+    
Sbjct: 238 ---KEFMPRLAGMRQWTSFSAP-TPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGG 293

Query: 323 IKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--- 379
           ++ +  +   + PEG+  +M         ++       F+L +E  V ++P +A  L   
Sbjct: 294 LRAMG-LRV-YVPEGTYFLMA--------ELPG--WDAFRLVEEARVALIPASAFYLEDP 341

Query: 380 -KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
            K+  R  F      L   L+R+        +
Sbjct: 342 PKDLFRFAFCKTEEELHLALERLGRVVNSPRE 373

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score =  179 bits (457), Expect = 2e-52
 Identities = 77/411 (18%), Positives = 141/411 (34%), Gaps = 63/411 (15%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN----GYAPTAGLPLTRRAIAEYLSR 92
            I L  G+P  H      +     + + + S K       Y    G      A+A  L  
Sbjct: 33  AIMLGGGNP-AHIPAMQDYFQ-TLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRE 90

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN---ILLPRPGFPIY-------ELSAA 142
            L + + P ++ +T+G   A      L +   A+     +  P  P Y            
Sbjct: 91  TLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDL 150

Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
           F        +LLP+  ++  +D       + T  + +  P NP GNV + + L KL   A
Sbjct: 151 FVSARPN-IELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLA 209

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
           N+    ++ D  YG    G   F       +   IL   SLSK   +PG R G  +    
Sbjct: 210 NQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIIL-CMSLSK-LGLPGSRCGIIIA--- 263

Query: 263 CGMFRKPKVVERM---KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319
                  K +  +        +   P     A +  ++++ D       L L +  +   
Sbjct: 264 -----NDKTITAIANMNGIISL--APGGMGPAMMCEMIKRNDL------LRLSETVIKPF 310

Query: 320 YNK---------IKEIPCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
           Y +          + +    C  HKPEG++ + L        D+    +  ++  K   V
Sbjct: 311 YYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLW-----FKDLPITTELLYQRLKARGV 365

Query: 370 IILPGTA---------VGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
           +++PG                 +R+ +  +P  +E  +  +    +R  ++
Sbjct: 366 LMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIERAWRE 416

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  179 bits (455), Expect = 4e-52
 Identities = 84/409 (20%), Positives = 162/409 (39%), Gaps = 55/409 (13%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYL 90
            + K ++L  G P     +H    A  A+A A  S     N Y    G P   +A+++  
Sbjct: 35  AQYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLY 90

Query: 91  SRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149
           S+ +   + P  +V VT G  +A+   +      G  +++  P F  YE          R
Sbjct: 91  SQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPR 150

Query: 150 HFDLLPDKG--------WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
              L P+K         W +D +++E+L ++ T  ++I  P NP G V     L+ +A  
Sbjct: 151 FIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANL 210

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWF 257
             K   L ++DEVY H+VF     + +    G++  T+   T+GS  K + + GW++GW 
Sbjct: 211 CKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTI---TIGSAGKTFSLTGWKIGWA 267

Query: 258 VTTDPCGMFRKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEV------FFKKTL 309
               P        +++ ++      +        Q A+    +   +       +F    
Sbjct: 268 YG--P------EALLKNLQMVHQNCVYTCATPI-QEAIAVGFETELKRLKSPECYFNSIS 318

Query: 310 NLLKQSVDICYNKIKEIPCISCPHKPEGS-------MAVMLKLNLSLLDDIIDDIDFCFK 362
             L    D   + + E+     P  P+G         ++  K++L+   D   D  F   
Sbjct: 319 GELMAKRDYMASFLAEVGMN--PTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKW 376

Query: 363 LAKEESVIILPGTA-------VGLKNWLRVTFAVDPYSLEECLDRIKSF 404
           + K   +  +P +A          ++++R  F     +L++  + ++ +
Sbjct: 377 MTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKW 425

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score =  177 bits (450), Expect = 4e-51
 Identities = 83/404 (20%), Positives = 148/404 (36%), Gaps = 47/404 (11%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
             +++I+L  G  +    +     A +   +AL     N Y+PT G P    ++ +  S 
Sbjct: 55  QGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSP 110

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---RHIEVR 149
               +L   +V VT+G  + I   +  L   G  +++  P F  Y  +      + + V 
Sbjct: 111 IYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVP 170

Query: 150 -------HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
                         + W +D +  E      T A++I  P NP G V++ + L  L    
Sbjct: 171 INPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNIC 230

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
            K   ++I+DEVY HL F D           +   T+   T+GS  K +   GWR+GW +
Sbjct: 231 VKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTL---TVGSAGKSFAATGWRIGWVL 287

Query: 259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVD 317
           + +   +        +      I     + +Q A  + +    ++ +F+K          
Sbjct: 288 SLNAELL----SYAAKAHTR--ICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFK 341

Query: 318 ICYNKIKEIPCISCPHKPEGSMAVML----------KLNLSLLDDIIDDIDFCFKLAKEE 367
           I  +   E+        PEG+  V++                + +   D      L  E 
Sbjct: 342 IFTSIFDELGL--PYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINEL 399

Query: 368 SVIILPGTA-------VGLKNWLRVTFAVDPYSLEECLDRIKSF 404
            V+ +P T           +N LR     D   LE  ++R+K  
Sbjct: 400 GVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLKLL 443

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  175 bits (445), Expect = 1e-50
 Identities = 84/411 (20%), Positives = 159/411 (38%), Gaps = 57/411 (13%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EKFNGYAPTAGLPLTRRAIAEYLS 91
           +E  V++L  G P     F     A EA   A+      N Y  T G P   + +A +  
Sbjct: 26  SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFG 81

Query: 92  RDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
             L  ++ P  +V VT G   A+  A   L   G  +++  P F  YE            
Sbjct: 82  ELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVF 141

Query: 151 FDLLPDK----------GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
             L P             W++D  ++       T ALV+  P NP G V+S + L+ +A 
Sbjct: 142 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201

Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGW 256
              +   + I DEVY  +V+     + +    G++  T+   T+GS  K +   GW++GW
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL---TIGSAGKTFSATGWKVGW 258

Query: 257 FVTTDPCGMFRKPKVVERMKKY--FDILGDPATFIQAAVPSILQQPDEV------FFKKT 308
            +   P        +++ ++      +   P    QAAV    ++   +      +F + 
Sbjct: 259 VLG--P------DHIMKHLRTVHQNSVFHCPTQS-QAAVAESFEREQLLFRQPSSYFVQF 309

Query: 309 LNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM-----LKLNLSLLDDII---DDIDFC 360
              +++  D     ++ +     P  P+GS  ++      K  +  L   +    D  F 
Sbjct: 310 PQAMQRCRDHMIRSLQSVGLK--PIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFV 367

Query: 361 FKLAKEESVIILPGTA-------VGLKNWLRVTFAVDPYSLEECLDRIKSF 404
             + K + ++ +P +            +++R  F  D  +L+   ++++ +
Sbjct: 368 KWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKW 418

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  171 bits (435), Expect = 1e-49
 Identities = 83/382 (21%), Positives = 158/382 (41%), Gaps = 41/382 (10%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E   KKVI L +G+P     F+T     +   ++L  E    Y  + G+   R  I+E  
Sbjct: 25  ESEGKKVIHLEIGEPD----FNTPKPIVDEGIKSL-KEGKTHYTDSRGILELREKISELY 79

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
                  + P+++ +T G +  +  A++ +   G  +L+  P +P Y+    F   +   
Sbjct: 80  KDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVF 139

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            D           + +E      T A++I +P NP G V      +++ E A +    +I
Sbjct: 140 CDFTV--------ESLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYII 187

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DE+Y  LV+  K +  +    +    + +   SK + + GWR+G+ ++          +
Sbjct: 188 SDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVIS--N------DE 239

Query: 271 VVERMKK---YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP 327
           ++E + K      I     T  Q A     ++  E      +    +   +    +K+  
Sbjct: 240 IIEAILKLQQNLFI--SAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFG 297

Query: 328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRV 385
                  P G+  V   +         D  +F +KL KE+ V + PG   G   KN++R+
Sbjct: 298 -WEVN-NPIGAYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRI 348

Query: 386 TFAVDPYSLEECLDRIKSFYQR 407
           ++A    +++E L+RIK F  +
Sbjct: 349 SYANSYENIKEGLERIKEFLNK 370

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score =  171 bits (436), Expect = 3e-49
 Identities = 76/426 (17%), Positives = 138/426 (32%), Gaps = 71/426 (16%)

Query: 35  KKVISLAMGDP----TVHSCFH--TTHVATEAVAEALLSEKFNG---YAPTAGLPLTRRA 85
           + V  L  G+P     V+  F      +  +       S        Y+   G      A
Sbjct: 32  QPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDA 91

Query: 86  IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN---------------ILLP 130
           +  + +R   + LT  ++ +T+G   A      L      N               +L  
Sbjct: 92  LVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPL 151

Query: 131 RPGF----PIYELSAAF-----RHIEVRHFDLLPDKGWEVDLDDIESLA---DQNTVALV 178
            P +     ++     F        EV H        + VD + +E+L    +    A+ 
Sbjct: 152 TPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAIC 211

Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238
              P NP GNV + + +  LAE A +    +I D  YG              + +    +
Sbjct: 212 CSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNT--I 269

Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK---YFDILGDPATFIQAAVPS 295
              SLSK   +PG R G  V           KV+E +       ++   P  F  A    
Sbjct: 270 LCFSLSK-IGLPGMRTGIIVA--------DAKVIEAVSAMNAVVNL--APTRFGAAIATP 318

Query: 296 ILQQ--PDEVFFKKTLNLLKQSVDICYNKIKEI-PCISCP-HKPEGSMAVMLKLNLSLLD 351
           ++      ++   +     ++   +    +K+         HKPEG++ + L       D
Sbjct: 319 LVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFK----D 374

Query: 352 DIIDDIDFCFKLAKEESVIILPGTAVGL----------KNWLRVTFAVDPYSLEECLDRI 401
             I  +D   +  K +  +I+P                   +R++ A D  +L + +  I
Sbjct: 375 LPISTLDLY-ERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVI 433

Query: 402 KSFYQR 407
               + 
Sbjct: 434 GEVVRE 439

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  170 bits (434), Expect = 5e-49
 Identities = 85/395 (21%), Positives = 159/395 (40%), Gaps = 33/395 (8%)

Query: 28  VDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
             + K   +     +I L+MG+P       T     E +      E  +GY+ + G+P  
Sbjct: 25  TAELKMAARRRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRL 80

Query: 83  RRAIAEYLSRDLPYKLTPND-VFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELS 140
           RRAI+ +       ++ P     VT G  + +  + +A L   G  IL+P P +PI+   
Sbjct: 81  RRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLD-HGDTILVPNPSYPIHIYG 139

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
           A     +VR   L+P   +  +L+     +      +++  P NP          +++  
Sbjct: 140 AVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVA 199

Query: 201 TANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259
            A +   +V+ D  Y  +V+ G K    M V G+    +   +LSK + + GWR+G+   
Sbjct: 200 LAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFM-- 257

Query: 260 TDPCGMFRKPKVVERMKK---YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316
               G    P++V  + +   Y D  G   T +Q A  + L+   +   +      +Q  
Sbjct: 258 ---VG---NPELVSALARIKSYHD-YGTF-TPLQVAAIAALEGDQQ-CVRDIARQYQQRR 308

Query: 317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA 376
           D+    ++E         P+ SM V  K+        +  ++F  KL ++  V + PG  
Sbjct: 309 DVLVKGLREAGW-MVE-NPKASMYVWAKIPEPYAH--LGSLEFAKKLLQDAKVSVSPGIG 364

Query: 377 VGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409
            G    + +R     +   L + +  IK+ ++   
Sbjct: 365 FGDYGDDHVRFALIENRDRLRQAVRGIKAMFRADG 399

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  167 bits (425), Expect = 6e-48
 Identities = 93/387 (24%), Positives = 174/387 (44%), Gaps = 39/387 (10%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD- 93
           K VISL +G+P     F T     E   EAL  +    Y P  GL   R AIAE L +  
Sbjct: 26  KDVISLGIGEPD----FDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEKLKKQN 80

Query: 94  -LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
            +       ++ V  G  QA  + ++   + G  +L+P P F  Y  +      +     
Sbjct: 81  GIEAD-PKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVP 139

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
              +  + +++D+++      T AL+I +P NP G V + + L+++A+   +   +VI+D
Sbjct: 140 TYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISD 199

Query: 213 EVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
           EVY H ++ D     +     ++       +T+   SK + + GWRLG+           
Sbjct: 200 EVYEHFIYDDARHYSIA----SLDGMFERTITVNGFSKTFAMTGWRLGFV-----AA--- 247

Query: 268 KPK-VVERMKKY--FDILGDPATFIQ-AAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI 323
            P  ++ERM K+  ++    P TFIQ AA  ++  +      ++      +   + + ++
Sbjct: 248 -PSWIIERMVKFQMYNATC-PVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRL 305

Query: 324 KEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KN 381
            E+  +    KP+G+  +  ++     D  +    F   + KE  V ++PG+A G   + 
Sbjct: 306 NEMG-LPT-VKPKGAFYIFPRIR----DTGLTSKKFSELMLKEARVAVVPGSAFGKAGEG 359

Query: 382 WLRVTFAVDPYSLEECLDRIKSFYQRH 408
           ++R+++A     LEE +DR++   +  
Sbjct: 360 YVRISYATAYEKLEEAMDRMERVLKER 386

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  165 bits (421), Expect = 2e-47
 Identities = 84/388 (21%), Positives = 145/388 (37%), Gaps = 47/388 (12%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K+ + L +G+P       T     +A+         N Y  +A     R A   +  R  
Sbjct: 23  KRGLDLGIGEP-QFE---TPKFIQDALKNHT--HSLNIYPKSAFEESLRAAQRGFFKRRF 76

Query: 95  PYKLTPNDVFVTSGCTQAI-DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
             +L  N++  T G  + + +    +L       I  P P + IYE +A F   +     
Sbjct: 77  KIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMP 136

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
           L  +  +   L++     +   V LVI+N P NP G   S + L    + A K   ++I 
Sbjct: 137 LTKENDFTPSLNE----KELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILIN 192

Query: 212 DEVYGHLVFGDKP-----FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           DE Y  +     P        +    +   +L + SLSKR   PG R G F+  D     
Sbjct: 193 DECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSG-FIAGD----- 246

Query: 267 RKPKVVERMKKYFDILGDPA-TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE 325
              +++E+ K +   LG  +   IQ A  +          +   N+   ++ +     K 
Sbjct: 247 --SRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHA--EFFRNIYANNLKLARKIFKN 302

Query: 326 IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKN---- 381
                       S  V L         + +  +F   L + E +I LP   +G       
Sbjct: 303 TL------IYPYSFYVYLP--------VQNGENFAKTLYQNEGIITLPALYLGRNRIGAD 348

Query: 382 WLRVTFAVDPYSLEECLDRIKSFYQRHA 409
           ++R+    D   LE+ L+ I+++ + HA
Sbjct: 349 YVRLALVYDTPLLEKPLEIIETYRENHA 376

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score =  164 bits (418), Expect = 6e-47
 Identities = 87/391 (22%), Positives = 166/391 (42%), Gaps = 58/391 (14%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
             V S + G+P     F+T     EA   AL  +    Y P AG P  R AIA+ L RD 
Sbjct: 30  IDVCSFSAGEPD----FNTPKHIVEAAKAAL-EQGKTRYGPAAGEPRLREAIAQKLQRDN 84

Query: 95  PYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRP-------------GFPIYELS 140
                 +++ VT+G  Q+I ++ +A++  PG  +++P P             G P+    
Sbjct: 85  GLCYGADNILVTNGGKQSIFNLMLAMIE-PGDEVIIPAPFWVSYPEMVKLAEGTPVI--- 140

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
                +         +  ++V  + I       T  LV   P NP G VY+   ++ +A+
Sbjct: 141 -----LPTT-----VETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQ 190

Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFV 258
            A +    V++DE+Y  +++ D   + +G          +     +K + + GWR+G+  
Sbjct: 191 VAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA 250

Query: 259 TTDPCGMFRKPK-VVERMKKYFDILG----DPATFIQAAVPSILQQPDEVFFKKTLNLLK 313
                     P  +V+   K   I G    +  TF Q    +  +   +   ++ L    
Sbjct: 251 G---------PVPLVKAATK---IQGHSTSNVCTFAQYGAIAAYENSQD-CVQEMLAAFA 297

Query: 314 QSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP 373
           +      + +  +P + CP KP+G+  +    +++        +DFC +L  +  V  +P
Sbjct: 298 ERRRYMLDALNAMPGLECP-KPDGAFYMF--PSIAKT--GRSSLDFCSELLDQHQVATVP 352

Query: 374 GTAVGLKNWLRVTFAVDPYSLEECLDRIKSF 404
           G A G  + +R+++A D  +++  ++R++ F
Sbjct: 353 GAAFGADDCIRLSYATDLDTIKRGMERLEKF 383

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  163 bits (416), Expect = 8e-47
 Identities = 79/389 (20%), Positives = 143/389 (36%), Gaps = 39/389 (10%)

Query: 28  VDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
           VD+ K + +     +I L++G               +A+AEAL      GY   +     
Sbjct: 13  VDEAKRKARERGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPF 68

Query: 83  RRAIAEYLSRDLPYKLTPND-VFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELS 140
               A +        L P        G  + +  + +AL   P   +LLP   +P Y  +
Sbjct: 69  LEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTE-PEDLLLLPEVAYPSYFGA 127

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
           A    +      L  D     DL  +     +    L++  P NP G V  + + ++   
Sbjct: 128 ARVASLRTFLIPLRED--GLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALG 185

Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260
            A K    +I D  Y   V+  +   P+ + G+   ++ L SLSK + + G+RLG+    
Sbjct: 186 LARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFA--- 242

Query: 261 DPCGMFRKPKVVERMKK---YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD 317
              G     + + R+++     D        +       L+ P E   +    + ++   
Sbjct: 243 --LG---SEEALARLERVKGVID-FNQY-AGVLRMGVEALKTPKE-VVRGYARVYRERAL 294

Query: 318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV 377
                +K +  +S    P  +M +  +L   +     DD++F  +L  E  V + PG   
Sbjct: 295 GMAEALKGV--LSLL-PPRATMYLWGRLPEGV-----DDLEFGLRLV-ERGVALAPGRGF 345

Query: 378 GL--KNWLRVTFAVDPYSLEECLDRIKSF 404
           G   K ++R+        L E   RI+  
Sbjct: 346 GPGGKGFVRIALVRPLEELLEAAKRIREA 374

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  163 bits (416), Expect = 2e-46
 Identities = 78/395 (19%), Positives = 145/395 (36%), Gaps = 42/395 (10%)

Query: 28  VDDEKNEKK---VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRR 84
               K E     +I++A+G P       T     +   +AL   +   Y    G    ++
Sbjct: 37  TMGRKIEHGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQ 92

Query: 85  AIAEYLSRDLPYKLTPND-VFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELSAA 142
           AI ++  R     L   D V +  G    +  V   +++ PG  +LLP PG+  Y     
Sbjct: 93  AIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVIN-PGDYVLLPDPGYTDYLAGVL 151

Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
               +    +L P   +  D   ++S     T  + +  P NP G+  + +   +     
Sbjct: 152 LADGKPVPLNLEPP-HYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKF 210

Query: 203 NKLKTLVIADEVYGHLVFGDKPF----VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
               T ++ D  YG   F  K               +    + SLSK + + G+R+G+  
Sbjct: 211 KGTDTKIVHDFAYGAFGFDAKNPSILASE-NGKDVAI---EIYSLSKGYNMSGFRVGFA- 265

Query: 259 TTDPCGMFRKPKVVERMKK---YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS 315
                G      +++ +KK   + +  G     +Q A    L   D+ F ++  N+ K  
Sbjct: 266 ----VG---NKDMIQALKKYQTHTN-AGMF-GALQDAAIYALNHYDD-FLEEQSNVFKTR 315

Query: 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT 375
            D     + +          +G + V L+          D   F   L +E+S+++ PG 
Sbjct: 316 RDRFEAMLAKADL-PFV-HAKGGIYVWLETPPGY-----DSEQFEQFLVQEKSILVAPGK 368

Query: 376 AVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH 408
             G     ++R++ A+D   L+E   R+      +
Sbjct: 369 PFGENGNRYVRISLALDDQKLDEAAIRLTELAYLY 403

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score =  164 bits (416), Expect = 1e-45
 Identities = 92/482 (19%), Positives = 158/482 (32%), Gaps = 98/482 (20%)

Query: 9   DNTGSIITIKGMLSLLMQSVDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAE 63
                 I   G+   L   +D +KN++       ++    +       +   V  E V  
Sbjct: 72  GIMAGYINTDGIRERLFAFLDPDKNDEDKFLIDAVNYCHTELG----LNRDKVVAEWVNG 127

Query: 64  ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL---TPNDVFVTSGCTQAIDVA-MAL 119
           A+     N   P   L  T + I  +L              D+F T G T AI  A  +L
Sbjct: 128 AV---ANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSL 184

Query: 120 LSR----PGANILLPRPGFPIY----ELS-AAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170
                   G  I +  P F  Y    EL       +++  +       WE++ ++IE L 
Sbjct: 185 AENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSY---EKNDWEIEPNEIEKLK 241

Query: 171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL-VIADEVYGHLVFGDKPFVPMG 229
           D +  AL+++NP NP    +    L  + +   K   L +I+DEVYG  V   K    + 
Sbjct: 242 DPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV- 300

Query: 230 VFGSTVP--ILTLGSLSKRWIVPGWRLGW-----------------------------FV 258
                VP   + + S SK +   GWRLG                               V
Sbjct: 301 -----VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSV 355

Query: 259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQ----------AAVPSILQQPDEVFFKKT 308
             DP  M    ++    +          +  Q            + S     D+ +    
Sbjct: 356 VLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIA 415

Query: 309 LNLLKQSVDICYNKIKEIPCISCPHKPEG-----------SMAVMLKLNLSLLDDIIDDI 357
             L+ +  D  ++ + + P                     +  +  K     L +  + +
Sbjct: 416 RKLVSERYDQLHDAM-QAPKDETD--TNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQV 472

Query: 358 DFCFKLAKEESVIILPGTAVGLKNW-LRVTFAVDPYSLEECLDRI----KSFYQRHAKQL 412
           DF  KLA++  V+++ G   G K   LRV+ A       E    I        + + ++ 
Sbjct: 473 DFLLKLAEKNGVVLVDGVGFGAKPGELRVSQA---NLPTEDYALIGKQVLELLKEYYEEF 529

Query: 413 QR 414
           ++
Sbjct: 530 KQ 531

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score =  160 bits (408), Expect = 3e-45
 Identities = 79/409 (19%), Positives = 138/409 (33%), Gaps = 59/409 (14%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +  + +VISL +GD T       T    +   E    E ++GY    G    R AIA+  
Sbjct: 52  KYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTF 111

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF------- 143
                  +  +DVFV+ G    I   + ++      I +  P +P Y  S+         
Sbjct: 112 YGG--LGIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQF 168

Query: 144 -----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQK 197
                ++  + +    P+ G+  DL  +          ++    P NP G   + + L +
Sbjct: 169 NTDVQKYGNIEYMRCTPENGFFPDLSTVG------RTDIIFFCSPNNPTGAAATREQLTQ 222

Query: 198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT----------LGSLSKRW 247
           L E A K  ++++ D  Y   +  D P            I              S S   
Sbjct: 223 LVEFAKKNGSIIVYDSAYAMYMSDDNP----------RSIFEIPGAEEVAMETASFSNYA 272

Query: 248 IVPGWRLGWFVTTDPC---GMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVF 304
              G RLGW V          F   K   R+       G      QA   + L       
Sbjct: 273 GFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCF-NGAS-NISQAGALACLTPEGLEA 330

Query: 305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL-NLSLLDDIIDDIDFCFKL 363
             K +   K++ +I  +    +      +  + +  V +   N S         D   ++
Sbjct: 331 MHKVIGFYKENTNIIIDTFTSLGY-DV-YGGKNAPYVWVHFPNQS-------SWDVFAEI 381

Query: 364 AKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
            ++  V+  PG+  G   + ++RV+      ++ E   R K  Y+ H  
Sbjct: 382 LEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYKHHHH 430

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  160 bits (406), Expect = 5e-45
 Identities = 47/404 (11%), Positives = 109/404 (26%), Gaps = 64/404 (15%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT----RRAIAEYLSR 92
              +A GD      +   H    AV  +        Y              + I E    
Sbjct: 58  SADVASGDGLFLEEYWKQHKEASAVLVS--PWHRMSYFFNPVSNFISFELEKTIKELHEV 115

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLS--------RPGANILLPRPGFPIYELSAAFR 144
                     +    G TQ I   +  LS         P + ++   P +P++       
Sbjct: 116 VGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFR------ 169

Query: 145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204
             + ++FD      W  +  +  ++++      ++ +P NP G +               
Sbjct: 170 -EQTKYFDK-KGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH------------- 214

Query: 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264
              +     +Y  + +    + P  +       + L ++SK     G R GW +  D   
Sbjct: 215 -AVIKGCKSIYDMVYYWPH-YTP--IKYKADEDILLFTMSKFTGHSGSRFGWALIKD--- 267

Query: 265 MFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEV----------FFKKTLNLLK 313
                 V   +  Y            Q     +L++   +                  L+
Sbjct: 268 ----ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLR 323

Query: 314 QSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS------LLDDIIDDIDFCFKLAKEE 367
           +        + +    S    P+       +           +    ++   C++  +  
Sbjct: 324 ERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNG 383

Query: 368 SVIILPGTAVGL-KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK 410
            +    G        ++R++        ++ +  +K   +   K
Sbjct: 384 RINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKDMVKAKRK 427

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score =  158 bits (401), Expect = 2e-44
 Identities = 66/392 (16%), Positives = 127/392 (32%), Gaps = 49/392 (12%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E  +  VI+L++GD T             ++A         GY P  GLP  R+ ++E  
Sbjct: 29  ENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDF 88

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHIEVR 149
            R     +   ++F++ G    +   ++    P   + +  P +P Y   A      E+ 
Sbjct: 89  YRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDPSYPAYLDIARLTGAKEII 144

Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTL 208
               L +  +  +  +         + ++ +  P NP G V +   L+ +   A + + L
Sbjct: 145 ALPCLQENAFFPEFPEDTH------IDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEIL 198

Query: 209 VIADEVYGHLVF-GDKPFVPMGVFGSTVPIL----------TLGSLSKRWIVPGWRLGWF 257
           ++ D  Y   +     P            I            + S SK     G RLGW 
Sbjct: 199 ILFDAAYSTFISDPSLP----------KSIFEIPDARFCAIEINSFSKPLGFAGIRLGWT 248

Query: 258 V---TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ 314
           V              +  ER        G      Q A  + L    +    + ++  ++
Sbjct: 249 VIPQELTYADGHFVIQDWERFLSTTF-NGAS-IPAQEAGVAGLSILPQ---LEAIHYYRE 303

Query: 315 SVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG 374
           + D+    +            E +  + +K         I D D      +E  + I PG
Sbjct: 304 NSDLLRKALLATGF-EVF-GGEHAPYLWVKPT----QANISDRDLFDFFLREYHIAITPG 357

Query: 375 TAVGL--KNWLRVTFAVDPYSLEECLDRIKSF 404
              G     ++R +       +    +R++  
Sbjct: 358 IGFGRSGSGFVRFSSLGKREDILAACERLQMA 389

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score =  154 bits (393), Expect = 2e-43
 Identities = 98/387 (25%), Positives = 164/387 (42%), Gaps = 59/387 (15%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           + VI+L  G+P     F T     E     L  +    Y    G+   R  IA+ +    
Sbjct: 41  EDVINLTAGEPD----FPTPEPVVEEAVRFL-QKGEVKYTDPRGIYELREGIAKRIGERY 95

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF----PIYELSAAFRHIEVRH 150
              ++P+ V VT+G  QA+  A   L  PG  +++  P +    P   L+       V  
Sbjct: 96  KKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGG-TVNVV-- 152

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            +    K ++  L+++E L    T A++I +P NP G VY  + L+ L   A K    +I
Sbjct: 153 -ETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYII 211

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265
           +DEVY  LV+ D+ F  +      V      I+ +   SK   + GWR+G+ ++      
Sbjct: 212 SDEVYDSLVYTDE-FTSIL----DVSEGFDRIVYINGFSKSHSMTGWRVGYLIS------ 260

Query: 266 FRKPKVVERMKKYFDILG----DPATFIQAAVPSILQQPDEVF---FKKTLNLLKQSVDI 318
               KV   + K   I         T  Q A    L+  +      FK+  N +      
Sbjct: 261 --SEKVATAVSK---IQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFV------ 309

Query: 319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII-DDIDFCFKLAKEESVIILPGTAV 377
              ++K++  +    +PEG+  +           +  DD+ FC +L +E+ V ++PG+A 
Sbjct: 310 -VERLKKMG-VKFV-EPEGAFYLFF--------KVRGDDVKFCERLLEEKKVALVPGSAF 358

Query: 378 GLKNWLRVTFAVDPYSLEECLDRIKSF 404
               ++R++FA     L E LDRI+ F
Sbjct: 359 LKPGFVRLSFATSIERLTEALDRIEDF 385

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score =  153 bits (389), Expect = 7e-43
 Identities = 97/380 (25%), Positives = 170/380 (44%), Gaps = 39/380 (10%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
             +++L  G+P     F T     EA   AL ++    YAP AG+P  R A+AE   R+ 
Sbjct: 31  VDLVALTAGEPD----FDTPEHVKEAARRAL-AQGKTKYAPPAGIPELREALAEKFRREN 85

Query: 95  PYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
              +TP +  VT G +QA+ ++  A+L  PG  +++  P +  Y     F    V   + 
Sbjct: 86  GLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLSPYWVSYPEMVRFAGGVVVEVET 144

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP++G+  D + +       T ALV+ +P NP G VY  + L+ LA  A +    +++DE
Sbjct: 145 LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDE 204

Query: 214 VYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK- 270
           +Y HL++  + F P    G   P   LT+   +K + + GWR+G+            PK 
Sbjct: 205 IYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMTGWRIGYAC---------GPKE 251

Query: 271 VVERMKKYFDILG----DPATFIQAAVPSIL--QQPDEVFFKKTLNLLKQSVDICYNKIK 324
           V++ M     +       P T  Q A    L  Q+    F +      ++  D+    + 
Sbjct: 252 VIKAMAS---VSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLT 308

Query: 325 EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR 384
            +  +    +P G+  V+  ++ S +    D++    +L  E  V ++PGT       +R
Sbjct: 309 ALG-LKAV-RPSGAFYVL--MDTSPI--APDEVRAAERL-LEAGVAVVPGTDFAAFGHVR 361

Query: 385 VTFAVDPYSLEECLDRIKSF 404
           +++A    +L + L+R    
Sbjct: 362 LSYATSEENLRKALERFARV 381

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score =  150 bits (382), Expect = 2e-41
 Identities = 70/403 (17%), Positives = 133/403 (33%), Gaps = 48/403 (11%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + K+ISL +GD T     +      +A A     E ++GY    G    R A+A      
Sbjct: 68  DAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGH 127

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---------- 143
                  +++F++ G    I   + ++      + +  P +P+Y  ++            
Sbjct: 128 --AGRAADEIFISDGSKCDI-ARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGT 184

Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETA 202
               + +    PD  +  DL   +         ++    P NP G   +   L +L   A
Sbjct: 185 GFDGIEYMVCNPDNHFFPDLSKAK------RTDIIFFCSPNNPTGAAATRAQLTELVNFA 238

Query: 203 NKLKTLVIADEVYGHLVF-GDKPF----VPMGVFGS-TVPILTLGSLSKRWIVPGWRLGW 256
            K  ++++ D  Y   +   D P     +P    G+  V I    S SK     G RLGW
Sbjct: 239 RKNGSILVYDAAYALYISNPDCPKTIYEIP----GADEVAIE-TCSFSKYAGFTGVRLGW 293

Query: 257 FV---TTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK 313
            V                  R+       G     +QA   + LQ          +   K
Sbjct: 294 TVVPKALKYANGEPVHADWNRVMTTCF-NGAS-NIVQAGGLACLQPEGLKEMNAMIKFYK 351

Query: 314 QSVDICYNKIKEIPCISCPHKPEGSMAVMLKL-NLSLLDDIIDDIDFCFKLAKEESVIIL 372
           ++  I      E+   S     + +  + +               D   ++ +  +++  
Sbjct: 352 ENAQILKTTFTEMGF-SVY-GGDDAPYIWVGFPGK-------PSWDVFAEILERCNIVTT 402

Query: 373 PGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQ 413
           PG+  G   + ++R +      ++ E + R K  Y +      
Sbjct: 403 PGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAYGKRNASHH 445

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score =  149 bits (378), Expect = 3e-40
 Identities = 70/441 (15%), Positives = 132/441 (29%), Gaps = 81/441 (18%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA-EYLSRD 93
            K +S                   E V   L       Y     +      I  +Y+ R+
Sbjct: 104 GKSLSYVRDQLG----LDPAAFLHEMVDGILG----CNYPVPPRMLNISEKIVRQYIIRE 155

Query: 94  LPYKLTPN---DVFVTSGCTQAI-----DVAMALLSRPGANILLPRPGF----PIYELS- 140
           +     P+   ++F   G T A+      + +  L + G  + +  P F     I EL+ 
Sbjct: 156 MGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQ 215

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
            A   + +      P   W+    +++ L D        +NP NP       + L+++  
Sbjct: 216 YALEEVAIN---ADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRN 272

Query: 201 TANKLKT--LVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGW 256
              + +   +++ D+VYG        F       +  P   L + S SK +   GWRLG 
Sbjct: 273 IVAEHRPDLMILTDDVYGTFADD---FQS---LFAICPENTLLVYSFSKYFGATGWRLGV 326

Query: 257 -----------------------------FVTTDPCGMFRKPKVVERMKKY----FDILG 283
                                         +  D   +    ++V   +         L 
Sbjct: 327 VAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLS 386

Query: 284 DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-------- 335
            P     A         +   +K TL  L +  +    +   +P +   +          
Sbjct: 387 TPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELGMPPLRDENAVDYYTLIDL 446

Query: 336 -EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNW-LRVTFAVDPYS 393
            + +  +  +             D  F++A E  +++LPG   G      R + A     
Sbjct: 447 QDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA---NL 503

Query: 394 LEECLDRIKSFYQRHAKQLQR 414
            E     I    ++ A +L  
Sbjct: 504 NEYEYAAIGRALRKMADELYA 524

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score =  143 bits (364), Expect = 5e-39
 Identities = 88/401 (21%), Positives = 166/401 (41%), Gaps = 47/401 (11%)

Query: 23  LLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GYAPTAGLPL 81
           ++ ++ + +K   K+ISLA GDP          +  E   E L  E  +  Y P  G+P 
Sbjct: 22  VMKKASELQKKGVKLISLAAGDPDPEL-IPRAVLG-EIAKEVLEKEPKSVMYTPANGIPE 79

Query: 82  TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA 141
            R  +A +L +    +++P ++ +T G T A+D+   +L  PG  ++   P +    ++ 
Sbjct: 80  LREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSY----INT 135

Query: 142 --AFRHIEVRHFDLLP--DKGWEVDLDDIESL-----ADQNTVALVIINP--GNPCGNVY 190
             AF  +  +  + +P  + G  + +D +E       A    V L+   P   NP G   
Sbjct: 136 LLAFEQLGAK-IEGVPVDNDG--MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTM 192

Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250
           S +  + L E A+K   L+I D  Y  + +     VP+    +   ++  G+LSK  +  
Sbjct: 193 SMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKV-LGT 251

Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMK--KYFDILGDPATFIQAAVPSILQQP--DEVFFK 306
           G+R+GW +           ++++++   K            Q      L++   ++   +
Sbjct: 252 GFRIGWIIAE--------GEILKKVLMQKQPIDFC-APAISQYIALEYLKRGYFEKYHLE 302

Query: 307 KTLNLLKQSVDICYNKI-KEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAK 365
             L   K+  DI    +   +P      KP   M VM  L      +  D I F  +L +
Sbjct: 303 GALLGYKEKRDIMLKALENHLPNAEF-TKPIAGMFVMFFLP-----EGADGISFANELME 356

Query: 366 EESVIILPGTA----VGLKNWLRVTFA-VDPYSLEECLDRI 401
            E V+++PG         KN +R+ F+      +   + ++
Sbjct: 357 REGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKL 397

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  140 bits (355), Expect = 8e-38
 Identities = 87/395 (22%), Positives = 159/395 (40%), Gaps = 51/395 (12%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR-- 92
            + + L +G+P  H    T  V T+A+  +L   +   Y  TAGLP  R+A A +L R  
Sbjct: 30  MEAVPLHIGEP-KHP---TPKVITDALTASL--HELEKYPLTAGLPELRQACANWLKRRY 83

Query: 93  DLPYKLTPND-VFVTSGCTQAI-DVAMALLSR----PGANILLPRPGFPIYELSAAFRHI 146
           D    +  ++ +    G  +A+      +L+         I+ P P + IYE +      
Sbjct: 84  DGL-TVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGG 142

Query: 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206
           E+ HF   P   +  D   I     + T  + + +P NP G+V      +++ +  +K  
Sbjct: 143 EI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYG 201

Query: 207 TLVIADEVYGHLVF-GDKPF----VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
            ++ +DE Y  + F G+KP         +  S   +L   SLSKR  VPG R G FV  D
Sbjct: 202 FIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSG-FVAGD 260

Query: 262 PCGMFRKPKVVERMKKYFDILGDPATF--IQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319
                   ++++    Y       A    +Q A  +       V       L ++  +  
Sbjct: 261 -------AELLKNFLLYRTYH-GSAMSIPVQRASIAAWDDEQHV--IDNRRLYQEKFERV 310

Query: 320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL 379
              ++++  +     P+ S  + LK+         DD+ F   L ++ ++ +LPG  +  
Sbjct: 311 IPILQQVFDVK---LPDASFYIWLKV------PDGDDLAFARNLWQKAAIQVLPGRFLAR 361

Query: 380 --------KNWLRVTFAVDPYSLEECLDRIKSFYQ 406
                   + ++R+    D  +  +  + I S Y+
Sbjct: 362 DTEQGNPGEGYVRIALVADVATCVKAAEDIVSLYR 396

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  136 bits (344), Expect = 1e-36
 Identities = 62/400 (15%), Positives = 117/400 (29%), Gaps = 56/400 (14%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT-----RRAIAEYLS 91
           V++L  GDPT +  +         V      +  + ++    L          AI +   
Sbjct: 24  VVNLDHGDPTAYEEYWRKMGDRCTVTIRGC-DLMSYFSDMTNLCWFLEPELEDAIKDLHG 82

Query: 92  RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIE 147
                      + V +G TQ    A+  LS        +++   P +  Y     +    
Sbjct: 83  VVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSG 142

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           +  ++            D      +     ++ +P NP G +      + +    +  + 
Sbjct: 143 MYKWEG-----------DAWGFDKKGPYIELVTSPNNPDGTI-----RETVVNRPDDDEA 186

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
            VI D  Y    +                  + L + SK     G R+GW        + 
Sbjct: 187 KVIHDFAYYWPHYTPIT--------RRQDHDIMLFTFSKITGHAGSRIGW-------ALV 231

Query: 267 RKPKVVERMKKYFDI-LGDPATFIQAAVPSILQ---------QPDEVFFKKTLNLLKQSV 316
           +  +V ++M +Y  +     +   Q     IL             E FFK    ++K   
Sbjct: 232 KDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRW 291

Query: 317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI---IDDIDFCFKLAKEESVIILP 373
           +     +KE    + P  PE       K   S          +        +   V+   
Sbjct: 292 EKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRA 351

Query: 374 GTAVGL-KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL 412
           G   G  K  +RV+           L+R+ +     +  L
Sbjct: 352 GERCGSDKKHVRVSMLSREDVFNVFLERLANMKLIKSIDL 391

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score =  136 bits (344), Expect = 3e-36
 Identities = 82/407 (20%), Positives = 149/407 (36%), Gaps = 58/407 (14%)

Query: 35  KKVISLAMGDPTVHSCF-------HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA 87
           K  IS   G P   + F           +  +     L       Y+ T G P+ ++ I 
Sbjct: 43  KDAISFGGGVPDPET-FPRKELAEIAKEIIEKEYHYTL------QYSTTEGDPVLKQQIL 95

Query: 88  EYLSRDL-PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFR 144
           + L R      L  +++  T G  QA+D+   L     +  +L  P +    L A  AFR
Sbjct: 96  KLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAY----LGAINAFR 151

Query: 145 HIEVRHFDL-LPDKGWEVD-----LDDIESLADQNTVALVIINP--GNPCGNVYSYQHLQ 196
                   + L D G +++     L + +       V  + +     NP G   S +  +
Sbjct: 152 QYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRK 211

Query: 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
            L E A K    ++ D+ YG L +  +   P+   G    ++ L + SK  + PG R+G 
Sbjct: 212 ALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSK-VLAPGLRIGM 270

Query: 257 FVTTDPCGMFRKPKVVERMK--KYFDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLK 313
              +         + + ++   K    L              L++ D     K T+ L +
Sbjct: 271 VAGS--------KEFIRKIVQAKQSADLC-SPAITHRLAARYLERYDLLEQLKPTIELYR 321

Query: 314 QSVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV 369
           +   +  N ++E    IP +    K EG + + L L      +  D  +  F+ AK + V
Sbjct: 322 RKRTVMLNALEEYFSDIPGVKW-VKSEGGLFIWLTLP-----EGFDTWEM-FEYAKRKKV 374

Query: 370 IILPGTA----VGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRHAKQ 411
             +PG            +R++F       + E + R++     + K+
Sbjct: 375 FYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGKE 421

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score =  135 bits (342), Expect = 4e-36
 Identities = 86/391 (21%), Positives = 160/391 (40%), Gaps = 60/391 (15%)

Query: 35  KKVISLAMGDPTVHSCF-------HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA 87
             ++S A G P     F           +  E    AL       Y+PT G    R  +A
Sbjct: 32  PGILSFAGGLPAPEL-FPKEEAAEAAARILREKGEVAL------QYSPTEGYAPLRAFVA 84

Query: 88  EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRH 145
           E++       + P +V +T+G  QA+D+   +    G+ +LL  P +    + A  AFR 
Sbjct: 85  EWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSY----MGAIQAFRL 134

Query: 146 IEVRHFDLLP--DKGWEVDLDDIESLADQNTVALVIINP--GNPCGNVYSYQHLQKLAET 201
              R F  +P  ++G   DLD +E +  +     + + P   NP G +      ++L + 
Sbjct: 135 QGPR-FLTVPAGEEG--PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQM 191

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFV 258
             +   +V+ D+ Y  L FG+     +           ++ LGS SK  + PG R+ + V
Sbjct: 192 VMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-VLSPGLRVAFAV 250

Query: 259 TTDPCGMFRKPKVVERMK--KYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV 316
                     P+ ++++   K    L       Q  V  +L++      ++   + ++  
Sbjct: 251 AH--------PEALQKLVQAKQGADLH-TPMLNQMLVHELLKEGFSERLERVRRVYREKA 301

Query: 317 DICYNKI-KEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT 375
               + + +E+P      +P+G M V ++L        +      F+ A EE+V  +PG 
Sbjct: 302 QAMLHALDREVPKEVRYTRPKGGMFVWMELP-----KGLSAEGL-FRRALEENVAFVPGG 355

Query: 376 A----VGLKNWLRVTFA-VDPYSLEECLDRI 401
                 G +N LR+++A +D   + E + R+
Sbjct: 356 PFFANGGGENTLRLSYATLDREGIAEGVRRL 386

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  134 bits (339), Expect = 2e-35
 Identities = 63/399 (15%), Positives = 135/399 (33%), Gaps = 49/399 (12%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD- 93
               +  +G  T            +A+   L  ++   YAP  G+   R    + + RD 
Sbjct: 47  STTYNATIGMATNKDGKMFASSL-DAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN 105

Query: 94  --LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRH-IEVRH 150
             L      +   VT+  T  + +   L       ILLP   +  Y+L    R+   ++ 
Sbjct: 106 PELSID-NMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQT 164

Query: 151 FDLLPDKGWEVDLDDIE---SLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           + +  DK      D +       +++ V +++  P NP G   +++ +  + E    L  
Sbjct: 165 YPIF-DKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALAN 223

Query: 208 -----LVIADEVYGHLVFGDKPFVPM-----GVFGSTVPILTLGSLSKRWIVPGWRLGWF 257
                + + D+ Y  L + D     +      +  + +  + L   +K +   G+R+G+ 
Sbjct: 224 KGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFM 283

Query: 258 VTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVF---------FK 306
             T         +V+E   K      +       Q+AV  +L+   +            K
Sbjct: 284 --TFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLK 341

Query: 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE 366
           +   + K+ V       +        +       + +K++       +D       L  +
Sbjct: 342 ERYEVTKEVV----YADQYHSHWQA-YDFNSGYFMAIKVH------DVDPEALRKHLIDK 390

Query: 367 ESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSF 404
            S+ ++   A      +R+ F+ V+   +    D I   
Sbjct: 391 YSIGVIALNATD----IRIAFSCVEKDDIPHVFDSIAKA 425

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score =  131 bits (331), Expect = 4e-34
 Identities = 91/394 (23%), Positives = 157/394 (39%), Gaps = 58/394 (14%)

Query: 35  KKVISLAMGDPTVHSCF-------HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA 87
             +ISLA G P   + F           +  +   +AL       Y  T G    R  + 
Sbjct: 76  SDIISLAGGLPNPKT-FPKEIIRDILVEIMEKYADKAL------QYGTTKGFTPLRETLM 128

Query: 88  EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRH 145
           ++L +        ND+ +TSG  QA+D+   +   PG  +++  P +    L+A  AF  
Sbjct: 129 KWLGKRYG-ISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNF 183

Query: 146 IEVRHFDLLP--DKGWEVDLDDIESL-----ADQNTVALVIINP--GNPCGNVYSYQHLQ 196
            E + +  +P  D+G  + ++ +E       +    V +V   P   NP G   +    +
Sbjct: 184 YEPQ-YIQIPLDDEG--MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRK 240

Query: 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
            L E A++   +V+ D+ YG L +   P   +    +   ++ LG+ SK  + PG+R+GW
Sbjct: 241 YLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGW 299

Query: 257 FVTTDPCGMFRKPKVVERMK--KYFDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLK 313
            V          P ++ +M+  K    L     F Q      +     E    +     K
Sbjct: 300 MVGD--------PGIIRKMEIAKQSTDLC-TNVFGQVVAWRYVDGGYLEKHIPEIRKFYK 350

Query: 314 QSVDICYNKI-KEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL 372
              D     + + +P      KPEG M + + L      D ID      + A ++ V  +
Sbjct: 351 PRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLP-----DGIDSKKM-LERAIKKGVAYV 404

Query: 373 PGTA----VGLKNWLRVTFA-VDPYSLEECLDRI 401
           PG A      +KN +R+ F  VD   + E + R+
Sbjct: 405 PGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRL 438

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score =  127 bits (322), Expect = 4e-33
 Identities = 84/434 (19%), Positives = 146/434 (33%), Gaps = 82/434 (18%)

Query: 16  TIKGMLSLLMQSVDDEKNEKKVISLAMGDP-----------TVHSCFHTTHVATEAVAEA 64
            I+ M  +L +          +ISLA G P                  T     E +  A
Sbjct: 18  PIRTMTDILSRGPKS------MISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRA 71

Query: 65  LLSEKFNGYAPTAGLPLTRRAIAEYLSR-------DLPYKLTPNDVFVTSGCTQAIDVAM 117
           L       Y+P+AG+P     + +   +         P      D+ VTSG  Q +    
Sbjct: 72  L------QYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVF 125

Query: 118 ALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDLLPDK-GWEVDLDDIESL----- 169
            ++  PG N+LL  P +         +   +     ++  D+ G  +  D +  +     
Sbjct: 126 EMIINPGDNVLLDEPAY----SGTLQSLHPLGCNIINVASDESG--IVPDSLRDILSRWK 179

Query: 170 ------ADQNTVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221
                   +NT   +   P   NP GN  + +  +++ E A K   L+I D+ Y  L F 
Sbjct: 180 PEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFN 239

Query: 222 DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK--KYF 279
                          ++   S SK  I  G R+G+              ++ER+      
Sbjct: 240 KFRVPTFLSMDVDGRVIRADSFSKI-ISSGLRIGFLTGP--------KPLIERVILHIQV 290

Query: 280 DILGDPATFIQAAVPSILQQPDEVFFKKTL----NLLKQSVDICYNKIKEI--PCISCPH 333
             L  P+TF Q  +  +L +  E  F   +    +      D       +         H
Sbjct: 291 STLH-PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEW-H 348

Query: 334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA-----VGLKNWLRVTFA 388
            P   M + +K     +  I D  +   + A +  V++LPG A          +LR +F+
Sbjct: 349 VPAAGMFLWIK-----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403

Query: 389 -VDPYSLEECLDRI 401
              P  ++     +
Sbjct: 404 SASPEQMDVAFQVL 417

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score =  117 bits (295), Expect = 2e-29
 Identities = 67/428 (15%), Positives = 125/428 (29%), Gaps = 69/428 (16%)

Query: 17  IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK----FNG 72
            +  L L  Q+ +  K     +++  G P     F  ++     +    +        N 
Sbjct: 7   SRPALDLARQAYEAFKARGLNLNMQRGQPADAD-FDLSNGLLTVLGAEDVRMDGLDLRNY 65

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPY-------KLTPNDVFVTSGCTQAIDVAMALLSRPGA 125
               AGLP  R   A YL              L    + +T      +  +         
Sbjct: 66  PGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTP 125

Query: 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLP----DKGWEVDLDDIES-LADQNTVALVII 180
            +++  PG+        F  ++   F+LL       G   D+D +E       +V  ++ 
Sbjct: 126 KMIVTVPGYD-----RHFLLLQTLGFELLTVDMQSDG--PDVDAVERLAGTDPSVKGILF 178

Query: 181 NP--GNPCGNVYSYQHLQKLAE-TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP- 236
            P   NP G   S +  ++LA   A      + AD+ Y      ++       F      
Sbjct: 179 VPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARD 238

Query: 237 ------ILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMK--KYFDILGDPAT 287
                      S SK  I   G  LG+  +            +  +        +G P  
Sbjct: 239 AGYPDRAFVFASTSK--ITFAGAGLGFVAS--------SEDNIRWLSKYLGAQSIG-PNK 287

Query: 288 FIQAAVPSILQQPD---EVFFKKTLNLLKQS----VDICYNKIKEIPCISCPHKPEGSMA 340
             QA     L +     E   +    ++        ++   ++ E    +    P+G   
Sbjct: 288 VEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYF 347

Query: 341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA------VGLKNWLRVTFA-VDPYS 393
           + L       + + D +    KLA+   V + P  A            LR+         
Sbjct: 348 ISLD----TAEPVADRV---VKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEE 400

Query: 394 LEECLDRI 401
           +   +  +
Sbjct: 401 VRTAMQVV 408

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score =  108 bits (271), Expect = 2e-26
 Identities = 60/317 (18%), Positives = 119/317 (37%), Gaps = 56/317 (17%)

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
            ++I  Y       KL    + + +G ++ I+    L       IL+  P +  YE++A 
Sbjct: 67  NKSIENY------LKLKDIGIVLGNGASEIIE----LSISLFEKILIIVPSYAEYEINAK 116

Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAET 201
              + V    L  D+   +D +DI S  D      VII NP NP G + + +    + + 
Sbjct: 117 KHGVSVVFSYL--DENMCIDYEDIISKIDDVD--SVIIGNPNNPNGGLINKEKFIHVLKL 172

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT-------LGSLSKRWIVPGWRL 254
           A + K  +I DE +                 S V  +        + +++K + +PG R 
Sbjct: 173 AEEKKKTIIIDEAFIEFTGDPSS--------SFVGEIKNYSCLFIIRAMTKFFAMPGIRF 224

Query: 255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDP---ATFIQAAVPSILQQPDEVFFKKTLNL 311
           G+       G+    ++  ++K       +P     F + A  + L+  D  + +++L  
Sbjct: 225 GY-------GITNNKEIAAKIKAK----QNPWNINCFAEMAAINCLK--DTNYIEESLLW 271

Query: 312 LKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVII 371
           +K+       ++ +I  I     P          N  L        +  +    +E ++I
Sbjct: 272 IKKERKRFIEELNKIGFIKRVFSPHA--------NFVLCRLENISGEKLYDSLLKEDIVI 323

Query: 372 LP-GTAVGL-KNWLRVT 386
                 +GL  +++R  
Sbjct: 324 RRCCNFIGLDDSFVRFA 340

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score =  104 bits (261), Expect = 4e-25
 Identities = 71/339 (20%), Positives = 132/339 (38%), Gaps = 50/339 (14%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
              A+ + L  +    Y P A      +A+A +      +++  + +   +G T++I   
Sbjct: 42  VKRALIDNL--DCIERY-PDADYFHLHQALARH------HQVPASWILAGNGETESIFTV 92

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
            + L       ++  PGF  Y  + A    E+R + L    GW++    +E+L     + 
Sbjct: 93  ASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPD--LD 148

Query: 177 LVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235
            + +  P NP G +     LQ +A+    L   +I DE +   +  +  F+P        
Sbjct: 149 CLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP---ALKDN 205

Query: 236 P-ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDP---ATFIQA 291
           P I  L SL+K + +PG RLG+ V +D          + RM++       P         
Sbjct: 206 PHIWVLRSLTKFYAIPGLRLGYLVNSD-------DAAMARMRRQ----QMPWSVNALAAL 254

Query: 292 AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLNLSL 349
           A    LQ  D  + + T + L++     Y  + ++P +          A  ++L+     
Sbjct: 255 AGEVALQ--DSAWQQATWHWLREEGARFYQALCQLPLL----TVYPGRANYLLLRCE--- 305

Query: 350 LDDIIDDIDFCFKLAKEESVIILPGTA-VGL-KNWLRVT 386
                +DID   +L   + ++I       GL   + RV 
Sbjct: 306 ----REDIDLQRRLLT-QRILIRSCANYPGLDSRYYRVA 339

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score =  104 bits (261), Expect = 9e-25
 Identities = 61/432 (14%), Positives = 114/432 (26%), Gaps = 81/432 (18%)

Query: 17  IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GY 73
           +  +   +     + K +   + L  G P+       ++           ++       Y
Sbjct: 14  LAQVREEVTAKYAELKAKNLSLDLTRGKPSA-EQLDLSNDLLSLPGGDFRTKDGVDCRNY 72

Query: 74  APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID---VAMALLSR-------- 122
               G+   R   AE L          + V    G +  I    ++ +            
Sbjct: 73  GGLLGIADIRELWAEALGLP------ADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPW 126

Query: 123 ---PGANILLPRPGFPIYELSA--AFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTV 175
                   L P PG+            H        +P  D+G   D+  +  L     V
Sbjct: 127 SAEEKVKWLCPVPGY----DRHFTITEHFGFE-MINVPMTDEG--PDMGVVRELVKDPQV 179

Query: 176 ALVIINP--GNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKPFVPMGVFG 232
             +   P  GNP G  +S Q  ++LAE +       ++ D  Y      D+  +   V  
Sbjct: 180 KGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIE 239

Query: 233 STVP------ILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMK--KYFDILG 283
                        + S SK  I   G  + +F ++         + +E          +G
Sbjct: 240 FAQAAGNPNRFWFMSSTSK--ITHAGSGVSFFASS--------KENIEWYASHANVRGIG 289

Query: 284 DPATFIQAAVPSILQQPDEVF--FKKTLNLLKQSVDICYNKIKE----IPCISCPHKPEG 337
            P    Q A          +     K    L    +     +               P G
Sbjct: 290 -PNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKW-TSPTG 347

Query: 338 SMAVMLKLNLSLLDDIIDDID-FCFKLAKEESVIILPGTAV------GLKNWLRVTFA-V 389
              + + +                 +LAKE  + +    +            +R+  +  
Sbjct: 348 GYFISVDVV--------PGTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLP 399

Query: 390 DPYSLEECLDRI 401
               LE  +D  
Sbjct: 400 PVAELEVAMDGF 411

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score =  104 bits (261), Expect = 1e-24
 Identities = 60/428 (14%), Positives = 111/428 (25%), Gaps = 72/428 (16%)

Query: 17  IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GY 73
           I      + +  D+ K++   + L  G P+         +          +        Y
Sbjct: 15  IGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNY 74

Query: 74  APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI--------------DVAMAL 119
               G+   R+  A+ L            V      +  I              D     
Sbjct: 75  GGLDGIVDIRQIWADLLGVP------VEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPW 128

Query: 120 LSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTV 175
                   + P PG+                     +P  + G   D+D +E L     V
Sbjct: 129 SKEETVKWICPVPGY----DRHFSITERFGFE-MISVPMNEDG--PDMDAVEELVKNPQV 181

Query: 176 ALVIINP--GNPCGNVYSYQHLQKLAETANKLKT-LVIADEVYGHLVFGDKPFVPMGVF- 231
             + + P   NP G   +    ++L+          V+ D  Y      D+    + +  
Sbjct: 182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVG 241

Query: 232 -----GSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDP 285
                G+        S SK  I   G  + +F+T       +             I   P
Sbjct: 242 LGEAAGNPNRFWAFTSTSK--ITLAGAGVSFFLT--SAENRKW---YTGHAGIRGI--GP 292

Query: 286 ATFIQAAVPSILQQPDEV--FFKKTLNLLKQSVDICYNKI-KEIPCISCP--HKPEGSMA 340
               Q A        + V    +K    L    +     +   +          P G   
Sbjct: 293 NKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYF 352

Query: 341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA------VGLKNWLRVTFA-VDPYS 393
           + L     ++      +    +LAKE  + +    +            LR+  +      
Sbjct: 353 ISLD----VVPGTASRV---AELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEE 405

Query: 394 LEECLDRI 401
           LE  +D +
Sbjct: 406 LEVAMDGV 413

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score = 98.8 bits (247), Expect = 3e-23
 Identities = 51/311 (16%), Positives = 102/311 (32%), Gaps = 52/311 (16%)

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R+ +A+         +  N + VT+G T A           G+  L+  P F  YE +  
Sbjct: 56  RQMLAKR------NSVDNNAILVTNGPTAAFYQIAQAF--RGSRSLIAIPSFAEYEDACR 107

Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
               EV  +            +DI      N     + NP NP G +     + +L    
Sbjct: 108 MYEHEVCFYPS---------NEDIGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDH 158

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
               T  + D+ Y    F  +  +          ++ + S S  + +PG R+G+ V    
Sbjct: 159 P--DTTFVLDQSYVS--FTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVA--- 211

Query: 263 CGMFRKPKVVERMKKYFDILGDP---ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319
                    ++R+  +      P         A   IL       F   +   +++    
Sbjct: 212 -----NKDFMKRVAAF----STPWAVNALAIEAAKFILI--HPAQFTLPIRKWQRNTVDF 260

Query: 320 YNKIKEIPCISCPHKPEGSMA--VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-GTA 376
              +  +  +    +   S     +L+L            +    + +E +++I      
Sbjct: 261 ITALNRLDGV----EVHPSGTTFFLLRL------KKGTAAELKKYMLEEYNMLIRDASNF 310

Query: 377 VGL-KNWLRVT 386
            GL ++++R+T
Sbjct: 311 RGLDESYVRIT 321

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score = 96.1 bits (240), Expect = 3e-22
 Identities = 69/339 (20%), Positives = 122/339 (35%), Gaps = 61/339 (17%)

Query: 63  EALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR 122
             L  +  N Y P           A+Y        + P  V V+ G  + I++ +     
Sbjct: 45  FQLTQQTLNRY-PECQPKAVIENYAQY------AGVKPEQVLVSRGADEGIELLIRAFCE 97

Query: 123 PGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII- 180
           PG   IL   P + +Y +SA    +E R    L +  W++DL  I    D   V +V + 
Sbjct: 98  PGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDN--WQLDLQGISDKLDG--VKVVYVC 153

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT- 239
           +P NP G + + Q  + L E     K +V+ADE Y    F  +         S    L  
Sbjct: 154 SPNNPTGQLINPQDFRTLLELTRG-KAIVVADEAYIE--FCPQA--------SLAGWLAE 202

Query: 240 ------LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE---RMKKYFDILGDPATFIQ 290
                 L +LSK + + G R G+ +           +V+    ++   + +    +T + 
Sbjct: 203 YPHLAILRTLSKAFALAGLRCGFTLAN--------EEVINLLMKVIAPYPL----STPVA 250

Query: 291 AAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLNLS 348
                 L     V  ++ +  +    +     +KEIPC+    +   S    ++ +    
Sbjct: 251 DIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVE---QVFDSETNYILAR---- 303

Query: 349 LLDDIIDDIDFCFKLAKEESVIILP-GTAVGLKNWLRVT 386
                       FK   ++ +I+        L   LR+T
Sbjct: 304 -----FKASSAVFKSLWDQGIILRDQNKQPSLSGCLRIT 337

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score = 95.7 bits (239), Expect = 5e-22
 Identities = 63/334 (18%), Positives = 118/334 (35%), Gaps = 42/334 (12%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
                A +    +   Y       L R+ +A++      Y+L   ++  T+G  + I++ 
Sbjct: 50  VAAIQANSS--VETEIYPDGWASSL-RKEVADF------YQLEEEELIFTAGVDELIELL 100

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
             +L     N ++  P F  Y  +A     EVR   LL D   E DL+ + +  D+ T  
Sbjct: 101 TRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQD--GEHDLEGMLNAIDEKTTI 158

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
           + I NP NP GN      +Q   +       LV+ DE Y   V   +P     +  +   
Sbjct: 159 VWICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYV-TPQPEKHEKLVRTYKN 216

Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP--KVVERMKKYFDILGDPATFIQAAVP 294
           ++   + SK + +   R+G+       G+  K   + +  ++  F+         Q    
Sbjct: 217 LIITRTFSKIYGLASARVGY-------GIADKEIIRQLNIVRPPFNT-TSIG---QKLAI 265

Query: 295 SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLNLSLLDD 352
             ++  D+ F  +        +       K    +        +    V++ L +     
Sbjct: 266 EAIK--DQAFIGECRTSNANGIKQYEAFAKRFEKVKLYP----ANGNFVLIDLGI----- 314

Query: 353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386
             +       L K    I   G A+G    +R+T
Sbjct: 315 --EAGTIFSYLEK-NGYITRSGAALGFPTAVRIT 345

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 96.1 bits (240), Expect = 6e-22
 Identities = 62/329 (18%), Positives = 134/329 (40%), Gaps = 17/329 (5%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           A+ ++  ++  Y +   D+    G   AI +A+   S  G  +L+  P +  +  +    
Sbjct: 104 AVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLN 163

Query: 145 HIEVRHFDLLPDKG-WEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
              +    L    G +E+D + +E  + D N    ++ +P NP G V+    L K+AE  
Sbjct: 164 DHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELC 223

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K   ++++DE++  L         +    ++     + L S +K + + G +  + +  
Sbjct: 224 KKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQ 283

Query: 261 DPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320
           +     R+ K   R     +   +  T    A  +  Q     + ++   +++ ++ +  
Sbjct: 284 NE--SLRR-KFQYRQLA--NNQHEVPTVGMIATQAAFQYGKP-WLEELKTVIEGNIKLVI 337

Query: 321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL- 379
            +++    I    +PEG+   ++ L+ S     I       KL  E  V++  G   G  
Sbjct: 338 KELEAKTKIK-VMEPEGT--YLVWLDFSAYA--IAQPQLSEKLQNEAKVVLNDGAHFGKE 392

Query: 380 -KNWLRVTFAVDPYSLEECLDRIKSFYQR 407
            K + R+  A    +++E L RI S + +
Sbjct: 393 GKYFARLNVATPKNTVQEALSRIISVFGK 421

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score = 94.9 bits (237), Expect = 1e-21
 Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
               +A  L     N Y P       R  + E +           +V + +G  + I + 
Sbjct: 48  LRSELAARLGEVALNRY-PVPSSEALRAKLKEVMQVP-----AGMEVLLGNGSDEIISML 101

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
               +RPGA ++ P PGF +Y +SA F  +E     L  D  + +D   + +   ++  A
Sbjct: 102 ALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRAD--FTLDRGAMLAAMAEHQPA 159

Query: 177 LVII-NPGNPCGNVYSYQHLQKLAETA--NKLKTLVIADEVYGHLVFGDKPFVP 227
           +V +  P NP GN++    ++ +   A  +  ++LV+ DE Y    F  + ++ 
Sbjct: 160 IVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP--FAQESWMS 211

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 64/340 (18%), Positives = 121/340 (35%), Gaps = 52/340 (15%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
           A  A  +A+   K N YA    L L    +A +      +++    + +T+G ++ I  A
Sbjct: 34  AQAAARDAV--VKANRYAKNEILML-GNKLAAH------HQVEAPSILLTAGSSEGIRAA 84

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
           +   +   A +++P   +   E  A    ++V    +L +  W  D++ +++     +  
Sbjct: 85  IEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDN--WAFDIEGLKAAVAAYSGP 142

Query: 177 -LVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FG 232
            +V + NP NP G +     ++    +     T+ I DE Y    F + P          
Sbjct: 143 SIVYLVNPNNPTGTITPADVIEPWIASKPA-NTMFIVDEAYAE--FVNDPRFRSISPMIT 199

Query: 233 STVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATF 288
                I+ L + SK   + G R+G+ V          P V+  M +Y     I       
Sbjct: 200 QGAENIILLKTFSKIHAMAGMRVGYAVAH--------PTVIALMGRYVAGEKI-NFSG-- 248

Query: 289 IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLN 346
           + AA+ S+    D  F   +      S  I    ++++     P     S    V  +L 
Sbjct: 249 VDAALASMN---DSAFITYSKKSNDVSRQILLKALEDLKLPYLP-----SEGNFVFHQLV 300

Query: 347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386
                     +        +  V+I         NW R++
Sbjct: 301 --------VPLKDYQTHMADAGVLIGRAFP-PADNWCRIS 331

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 94.9 bits (237), Expect = 1e-21
 Identities = 55/332 (16%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           A+ ++   +  Y     D+    G   AI +A+   ++ G  +L+  P +P +  S    
Sbjct: 74  AVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLN 133

Query: 145 HIEVRHFDLLPDKG-WEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
           + ++    L  + G +++D + +E+ + + +    ++ NP NP G V+  + L+++    
Sbjct: 134 NRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLC 193

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K   ++++DE++  L       V             L L S +K + + G +  + +  
Sbjct: 194 QKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIE 253

Query: 261 DPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318
           +       P +  + K     +   + ++    A  +  +     +      +L++++  
Sbjct: 254 N-------PTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKP-WLVALKAVLEENIQF 305

Query: 319 CYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV 377
                 +  P +    KP+G+   ++ L+ S     + D      L  +  VI+  G+  
Sbjct: 306 AVEYFAQEAPRLK-VMKPQGT--YLIWLDFSDYG--LTDDALFTLLHDQAKVILNRGSDY 360

Query: 378 GL--KNWLRVTFAVDPYSLEECLDRIKSFYQR 407
           G   +   R+  A     +EE   RI     +
Sbjct: 361 GSEGELHARLNIAAPKSLVEEICKRIVCCLPK 392

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score = 94.2 bits (235), Expect = 2e-21
 Identities = 62/336 (18%), Positives = 121/336 (36%), Gaps = 42/336 (12%)

Query: 57  ATEAVAEAL--LSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114
               +   +  ++ + N Y     + L R  +A Y+++     +T ++++  +G  + + 
Sbjct: 48  LVADLVATVDKIATELNRYPERDAVEL-RDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174
             +     PG   L  +P + ++ + A   H E        D  + +D+D          
Sbjct: 107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGAD--FRIDMDVALEEIRAKQ 164

Query: 175 VALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233
             +V +  P NP G+V S   ++++   A     +VI DE Y    F   P     +   
Sbjct: 165 PDIVFVTTPNNPTGDVTSLDDVERIINVAP---GIVIVDEAYAE--FSPSPSATTLLEKY 219

Query: 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDP---ATFIQ 290
              ++   ++SK +   G RLG+FV          P  ++ +      +  P   +   Q
Sbjct: 220 PTKLVVSRTMSKAFDFAGGRLGYFVAN--------PAFIDAVML----VRLPYHLSALSQ 267

Query: 291 AAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL 350
           AA    L+         T+  L         +++E+     P     S +     N    
Sbjct: 268 AAAIVALR--HSADTLGTVEKLSVERVRVAARLEELGYAVVP-----SES-----NFVFF 315

Query: 351 DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386
            D  D     ++   +  V+I     VG+   LR T
Sbjct: 316 GDFSDQHAA-WQAFLDRGVLIRD---VGIAGHLRTT 347

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 92.9 bits (232), Expect = 5e-21
 Identities = 64/327 (19%), Positives = 137/327 (41%), Gaps = 22/327 (6%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           A+A++   +   +   +     SG   AI   +   + PG  IL+  P + ++       
Sbjct: 70  AVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGN 129

Query: 145 HIEVRHFDLLPDKG-WEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
              V   DL+ +   + V+  D+E  LA  +   +V  NP NP G  +S + ++++AE  
Sbjct: 130 GRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELC 189

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K + L+I+DE++G LV  D+   P           +++L S SK + +        +  
Sbjct: 190 AKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIP 249

Query: 261 DPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318
           +       P +  R ++ F    +G+P      A  +  ++  + + ++   +L+ +   
Sbjct: 250 N-------PDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHD-WLRELKQVLRDNFAY 301

Query: 319 CYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV 377
               + + +P +        S   +  +++S L   ++  DFC  L ++  +II  G   
Sbjct: 302 AREFLAKEVPEVK-VLDSNAS--YLAWVDISALG--MNAEDFCKYLREKTGLIISAGNGY 356

Query: 378 GL--KNWLRVTFAVDPYSLEECLDRIK 402
                 ++R+  A     + + + R+K
Sbjct: 357 RGNGHEFVRINLACPKELVIDGMQRLK 383

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 92.6 bits (231), Expect = 9e-21
 Identities = 53/336 (15%), Positives = 128/336 (38%), Gaps = 22/336 (6%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
            + +++     + +  + +  T+G   A+  A+   ++PG  +++  P +  + ++   +
Sbjct: 74  TVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQ 133

Query: 145 HIEVRHFDLLPDKG-WEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
             ++   +LL   G + +D   +E    D+N  AL+  +P NP G V+    LQK+ +  
Sbjct: 134 ERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIV 193

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K   ++ +DE++  L+               +    +T  + SK + + G  +   +  
Sbjct: 194 LKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIK 253

Query: 261 DPCGMFRKPKVVERMKKYFDILG--DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318
           +       P + ER  K  D        T    A     ++  + +    + ++ ++  I
Sbjct: 254 N-------PDIRERFTKSRDATSGMPFTTLGYKACEICYKECGK-WLDGCIKVIDKNQRI 305

Query: 319 CYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV 377
             +  +   P I      EG+   +  ++   L   +D       +  +  +    G   
Sbjct: 306 VKDFFEVNHPEIK-APLIEGT--YLQWIDFRALK--MDHKAMEEFMIHKAQIFFDEGYIF 360

Query: 378 GL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQ 411
           G     + R+  A     ++E L+R+    +    +
Sbjct: 361 GDGGIGFERINLAAPSSVIQESLERLNKALKDLKNR 396

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 90.7 bits (226), Expect = 3e-20
 Identities = 71/356 (19%), Positives = 134/356 (37%), Gaps = 26/356 (7%)

Query: 59  EAVAEAL---LSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115
             + EAL   L     GY+          AIA + S      +    V         +  
Sbjct: 44  PCIIEALNQRLMHGVFGYSRWKNDEF-LAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE 102

Query: 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIES-LADQN 173
            +   S  G  +++  P +  +  +       V    L      W  D+  +E+ LA   
Sbjct: 103 LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPE 162

Query: 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233
              +++ +P NP G V++   L+ +A+   +    VI+DE++  +V+G++P +P     S
Sbjct: 163 CKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPW----S 218

Query: 234 TVP---ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ 290
            V       L S SK + +P     + +  +               K  D L  P+    
Sbjct: 219 NVARGDWALLTSGSKSFNIPALTGAYGIIENS-SSRDA---YLSALKGRDGLSSPSVLAL 274

Query: 291 AAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSL 349
            A  +  QQ    +       LK ++    +K+    P ++    P+ +   +  L+L  
Sbjct: 275 TAHIAAYQQGAP-WLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQST--YLAWLDLRP 330

Query: 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKS 403
           L+  IDD      L ++E V I+PG   G   + ++R+        LE+ +  + +
Sbjct: 331 LN--IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLIN 384

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 90.7 bits (226), Expect = 3e-20
 Identities = 67/328 (20%), Positives = 135/328 (41%), Gaps = 23/328 (7%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           +I  +L R   +K+    +  + G   AI + +  L++    I++  P +  +       
Sbjct: 75  SIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNN 134

Query: 145 HIEVRHFDLLPDKG--WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
           + E+    L   +   + +D +DIE+      +  ++ NP NP G V++   L+KL +  
Sbjct: 135 NRELIISPLQKLENGNYIMDYEDIENKIKDVKL-FILCNPHNPVGRVWTKDELKKLGDIC 193

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K    +I+DE++  ++      +PM           +T  + +K + + G +  + V  
Sbjct: 194 LKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLP 253

Query: 261 DPCGMFRKPKVVERMKKYFDILG--DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI 318
           D        K  + +   F  +       F   A  +     +  + +  L  L+ ++D 
Sbjct: 254 D-------EKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGES-WLESFLEYLESNIDF 305

Query: 319 CYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV 377
               I E +P +    KPEG+   +L ++ S L   + D +    L ++  V +  G + 
Sbjct: 306 AIKYINENMPKLK-VRKPEGT--YLLWVDFSALG--LSDEELESILVQKGKVALNQGNSF 360

Query: 378 GL--KNWLRVTFAVDPYSLEECLDRIKS 403
           G+    + R+  A     LEE L RIK+
Sbjct: 361 GIGGSGYQRINLACPRSMLEEALIRIKN 388

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 87.6 bits (218), Expect = 3e-19
 Identities = 69/357 (19%), Positives = 143/357 (40%), Gaps = 38/357 (10%)

Query: 59  EAVAEAL---LSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114
            AV +A+   +  +  GY    + L    +A AE+ +    Y+  P  +F      + + 
Sbjct: 39  PAVLQAITDAVQREAFGYQPDGSLL---SQATAEFYADRYGYQARPEWIFPIPDVVRGLY 95

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD---LLPDKGWEVDLDDIESLAD 171
           +A+   +   + +++P P +P       F H+ +       +  D    ++L D+E    
Sbjct: 96  IAIDHFTPAQSKVIVPTPAYP------PFFHL-LSATQREGIFIDATGGINLHDVEKGFQ 148

Query: 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231
               ++++ NP NP G V++ + L +L + A++    V+ DE++  LVF  +        
Sbjct: 149 AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQ-HTVAAGV 207

Query: 232 GSTVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATF 288
             T     +T+ + SK W + G +    + ++P          E  ++    I    +T 
Sbjct: 208 SDTAASVCITITAPSKAWNIAGLKCAQIIFSNP-------SDAEHWQQLSPVIKDGASTL 260

Query: 289 IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNL 347
              A  +  +   + F  + +  LK + D   ++I + IP        + +   ++ ++ 
Sbjct: 261 GLIAAEAAYRYGTD-FLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQAT--YLMWIDF 316

Query: 348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIK 402
                     +F  + AK   V +  G   G     + R+ FA     LEE +DR+ 
Sbjct: 317 RDTTIEGSPSEFFIEKAK---VAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMA 370

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score = 86.0 bits (214), Expect = 8e-19
 Identities = 51/336 (15%), Positives = 110/336 (32%), Gaps = 59/336 (17%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID-V 115
              A+A A    + N Y   A   +  R +AE+      +    +++ +  G  +  D +
Sbjct: 34  VQAAIAAAA--ARINRYPFDAEPRV-MRKLAEH------FSCPEDNLMLVRGIDECFDRI 84

Query: 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175
           +           +   PGF  Y    A   +      L  D    +D +D+         
Sbjct: 85  SAEF---SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD--LLLDPNDL--AQVSRDD 137

Query: 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235
            +V+ NP NP G   S   L +L + A      ++ DE Y    +       +       
Sbjct: 138 CVVLANPSNPTGQALSAGELDQLRQRA----GKLLIDETYVD--YSSFRARGLAYGE--- 188

Query: 236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE---RMKKYFDILGDPATFIQAA 292
             L   S SK + + G RLG         +F   +++    R + + ++       + A 
Sbjct: 189 NELVFRSFSKSYGLAGLRLGA--------LFGPSELIAAMKRKQWFCNV--GTLD-LHAL 237

Query: 293 VPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLNLSLL 350
             ++    ++   +  +           + ++ +           S A  V+++      
Sbjct: 238 EAALD---NDRAREAHIAKTLAQRRRVADALRGLGYRVAS-----SEANFVLVEN----- 284

Query: 351 DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386
                  +   +  +E  + +      GL + +R++
Sbjct: 285 ----AAGERTLRFLRERGIQVKDAGQFGLHHHIRIS 316

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 82.6 bits (205), Expect = 1e-17
 Identities = 52/338 (15%), Positives = 117/338 (34%), Gaps = 55/338 (16%)

Query: 57  ATEAVAEAL--LSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114
             +A+ E L         Y   +   L R    E       Y   P+ + + +G  + ++
Sbjct: 44  VVKAILEELGPDGAALRIYPSASSQKL-REVAGEL------YGFDPSWIIMANGSDEVLN 96

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174
             +   +  G  I    P +  Y   A  +   VR F L  D  + +             
Sbjct: 97  NLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGD--FRIAGFPERYEGK--- 151

Query: 175 VALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233
             +  +  P  P G  +  +++ +LA    +   +++ DE Y    F +   + +     
Sbjct: 152 --VFFLTTPNAPLGPSFPLEYIDELAR---RCAGMLVLDETYAE--FAESNALEL--VRR 202

Query: 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE---RMKKYF--DILGDPATF 288
              ++   +LSK + + G R+G  +          P+V+    +++ ++  D L      
Sbjct: 203 HENVVVTRTLSKSYSLAGMRIGLAIAR--------PEVIAALDKIRDHYNLDRLA----- 249

Query: 289 IQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS 348
            QAA  + L+  D+ +  +    ++++ +    +++ I     P     S       N  
Sbjct: 250 -QAACVAALR--DQAYLSECCRRIRETREWFTTELRSIGYDVIP-----SQG-----NYL 296

Query: 349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386
                  D    +       V++   +   L + +R++
Sbjct: 297 FATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRIS 334

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score = 81.8 bits (203), Expect = 3e-17
 Identities = 61/338 (18%), Positives = 117/338 (34%), Gaps = 47/338 (13%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
           A E + +     K + Y   + + L +  +A+       YK+   ++ + +G  Q I+ A
Sbjct: 48  AIECLRQNA--NKAHLYPDDSMIEL-KSTLAQK------YKVQNENIIIGAGSDQVIEFA 98

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
           +          L     F +YE+ A     +      +       +   +          
Sbjct: 99  IHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHN--LDEFKKLYETHKDEIKL 156

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGV--FGS 233
           + +  P NP G         +  +  N+   LV+ D  Y     F D             
Sbjct: 157 IFLCLPNNPLGECLDASEATEFIKGVNE-DCLVVIDAAYNEFASFKDSKKHLEPCELIKE 215

Query: 234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQ 290
              +L LG+ SK + + G R+G+ +            ++    K    F++  + A  ++
Sbjct: 216 FDNVLYLGTFSKLYGLGGLRIGYGIAN--------ANIISAFYKLRAPFNV-SNLA--LK 264

Query: 291 AAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLNLS 348
           AAV ++    D+ F +KTL      +++     K+            S    +       
Sbjct: 265 AAVAAMD---DDEFTEKTLENNFSQMELYKEFAKKHNIKIID-----SYTNFITYFF--- 313

Query: 349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386
              D  +  D   KL K + +II    + GL N +R+T
Sbjct: 314 ---DEKNSTDLSEKLLK-KGIIIRNLKSYGL-NAIRIT 346

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score = 77.6 bits (192), Expect = 5e-16
 Identities = 51/337 (15%), Positives = 114/337 (33%), Gaps = 63/337 (18%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
             + V   L S+    Y  +    L    I  YL  D    L+ N+V V +G  + I   
Sbjct: 37  LVDEVFRRLNSDALRIYYDSPDEEL-IEKILSYLDTD---FLSKNNVSVGNGADEIIY-- 90

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
             ++       +   P +  Y + A     +     L  D    +   ++          
Sbjct: 91  --VMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVNVG-----EGDV 141

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
           + I NP NP G+V+  + ++++ +T       V  DE Y    F  + +V        + 
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKTG----AFVALDEAYYE--FHGESYVDF------LK 189

Query: 237 ----ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE---RMKKYFDILGDPATFI 289
               +  + + SK + +   R+G+ V           K ++   R++  F++     +  
Sbjct: 190 KYENLAVIRTFSKAFSLAAQRVGYVVA--------SEKFIDAYNRVRLPFNV--SYVS-- 237

Query: 290 QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL 349
           Q      L       F++    + +  +   + ++E+           S       N   
Sbjct: 238 QMFAKVALD--HREIFEERTKFIVEERERMKSALREMGYRITD-----SRG-----NFVF 285

Query: 350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT 386
           +    ++ +   +  + ++V +        +  +R+T
Sbjct: 286 VFMEKEEKERLLEHLRTKNVAVRS-----FREGVRIT 317

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 3e-08
 Identities = 59/457 (12%), Positives = 127/457 (27%), Gaps = 119/457 (26%)

Query: 9   DNTGSIITIKGMLSLLMQSVDDEK----------NEKKVISLAMGD------PTVHSCFH 52
           D   SI++ + +  ++M                  +++++   + +        + S   
Sbjct: 40  DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK 99

Query: 53  TTHVATEAVAEALLSEK---FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFV--T 106
           T       +    + ++   +N     A   ++R      L + L  +L P   V +   
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL-LELRPAKNVLIDGV 158

Query: 107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI 166
            G  +        LS      +  +  F I+ L+    +              E  L+ +
Sbjct: 159 LGSGKTWVALDVCLSYK----VQCKMDFKIFWLNLKNCNSP------------ETVLEML 202

Query: 167 ESL---ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK 223
           + L    D N  +    +             L++L ++      L++   V       + 
Sbjct: 203 QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ------NA 256

Query: 224 PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG 283
                  F  +  IL                   +TT             R K+  D L 
Sbjct: 257 KAW--NAFNLSCKIL-------------------LTT-------------RFKQVTDFLS 282

Query: 284 DPATFIQAAVPSILQQPDEVFFK-KTLNLLKQSVDICYNKIKEIPCISCPHKPEG-SM-A 340
              T         L          +  +LL + +D    + +++P       P   S+ A
Sbjct: 283 AATT-----THISLDHHSMTLTPDEVKSLLLKYLDC---RPQDLPREVLTTNPRRLSIIA 334

Query: 341 VMLK-----------LNLSLLDDIID-DIDF--------CFK-LAK-EESVIILPGTAVG 378
             ++           +N   L  II+  ++          F  L+    S  I       
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394

Query: 379 LKNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQLQRY 415
           +  W  V  +     + +      S  ++  K+    
Sbjct: 395 I--WFDVIKSDVMVVVNKLHK--YSLVEKQPKESTIS 427

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.1 bits (129), Expect = 7e-08
 Identities = 81/509 (15%), Positives = 141/509 (27%), Gaps = 175/509 (34%)

Query: 12  GSIITIKGML-----SLLMQSVDDEKNEKKVISLAMGDP----TVHSCFHTTHVATEAVA 62
              + I G+L      + +      K     +   M        + +C      + E V 
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYK-----VQCKMDFKIFWLNLKNCN-----SPETVL 199

Query: 63  EAL------LSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPN------DV------ 103
           E L      +   +   +  ++ + L   +I   L R L  K   N      +V      
Sbjct: 200 EMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW 259

Query: 104 --FVTSGC-----TQAIDVAMALLSRPGANILL--PRPGFPIYELSAAF-RHIEVRHFDL 153
             F    C     T+   V   L +    +I L          E+ +   ++++ R  DL
Sbjct: 260 NAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIIN---PGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            P             +   N   L II              ++H+       +KL T++ 
Sbjct: 319 -P-----------REVLTTNPRRLSIIAESIRDGLATWDN-WKHVNC-----DKLTTII- 359

Query: 211 ADEVYGHLVFGD--KPFVPMGVF--GSTVPILTLGSLSKRWIVPGWRLGWF--VTTDPCG 264
            +     L   +  K F  + VF   + +P + L  +            WF  + +D   
Sbjct: 360 -ESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI------------WFDVIKSDV-- 404

Query: 265 MFRKPKVVERMKKYFDILGDPATFIQAAVPSI----LQQPDEVFFKKTLNLLKQSVDICY 320
                 VV ++ KY  +   P      ++PSI      + +    +  L+  +  VD  Y
Sbjct: 405 ----MVVVNKLHKYSLVEKQPKES-TISIPSIYLELKVKLEN---EYALH--RSIVD-HY 453

Query: 321 NKIKEIPCISCP--------------HKPEGSMAVMLKLNLSLLDDIIDDI--DFCFKLA 364
           N  K                      H        +  +       +   +  DF F   
Sbjct: 454 NIPKTFDSDDLIPPYLDQYFYSHIGHH--------LKNIEHPERMTLFRMVFLDFRFLEQ 505

Query: 365 KEESVIILPGTAVG-----------LKNWLRVTFAVDPYSLEECLDRIKSFYQRH----- 408
           K    I    TA             LK +       DP   E  ++ I  F  +      
Sbjct: 506 K----IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPK-YERLVNAILDFLPKIEENLI 560

Query: 409 -----------------------AKQLQR 414
                                   KQ+QR
Sbjct: 561 CSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A* Length = 374

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 15/133 (11%)

Query: 102 DVFVTSGCTQAIDVAMALLSRPGANILLPR-PGFPIYELSAAFRHIEVRHFDLLPDKGWE 160
                +  + AI   +  L        LP  PG P  E S   + +  ++F+        
Sbjct: 78  KCVGFNRTSSAILATILALKPKKVIHYLPELPGHPSIERSC--KIVNAKYFES------- 128

Query: 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV- 219
             + +I +  D++T+ ++  +  +    V   ++ +K+  TA   + +V  D+  G  V 
Sbjct: 129 DKVGEILNKIDKDTLVIITGSTMDL--KVIELENFKKVINTAKNKEAIVFVDDASGARVR 186

Query: 220 --FGDKPFVPMGV 230
             F   P + +G 
Sbjct: 187 LLFNQPPALKLGA 199

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	415
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	100.0
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	100.0
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	100.0
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	100.0
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	100.0
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	100.0
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	100.0
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	100.0
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	100.0
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	100.0
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	100.0
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	100.0
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	100.0
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	100.0
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	100.0
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	100.0
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	100.0
1iug_A	352	Putative aspartate aminotransferase; wild type, py	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	100.0
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	100.0
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	100.0
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	100.0
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	100.0
1svv_A	359	Threonine aldolase; structural genomics, structura	100.0
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	100.0
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	100.0
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	100.0
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	100.0
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	100.0
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	100.0
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	100.0
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	100.0
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	100.0
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	100.0
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	100.0
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	100.0
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	100.0
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	100.0
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.98
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.98
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.98
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.98
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.98
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.98
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.98
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.98
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.98
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.97
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.97
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.97
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.97
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.97
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.97
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.97
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.97
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.97
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.97
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.97
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.97
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.97
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.97
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.97
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.97
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.97
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.97
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.97
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.97
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.97
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.97
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.97
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.97
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.97
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.97
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.97
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.97
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.96
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.96
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.96
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.96
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.96
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.96
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.96
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.96
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.96
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.96
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.96
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.96
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.96
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.96
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.96
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.96
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.96
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.96
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.96
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.96
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.96
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.96
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.96
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.95
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.95
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.95
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.95
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.95
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.95
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.95
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.95
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.95
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.94
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.94
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.94
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.94
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.94
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.89
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.94
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.93
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.93
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.93
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.93
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.93
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.92
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.92
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.92
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.91
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.91
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.9
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.9
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.9
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.9
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.89
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.85
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.84
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.84
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.83
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.77
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.76
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.73
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.72

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=7.7e-53  Score=403.27  Aligned_cols=388  Identities=39%  Similarity=0.730  Sum_probs=326.8

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCC
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~   95 (415)
                      +++.+...+..+.   ..++++|+|+.|+|+....+++++.+++++.+.+.......|++..|..++|+++++++.+. +
T Consensus        38 ~i~~~~~~~~~~~---~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~  113 (427)
T 3dyd_A           38 PIRAIVDNMKVKP---NPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-E  113 (427)
T ss_dssp             ---------CCCC---CTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-T
T ss_pred             hHHHHHHHHhhcc---cCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-C
Confidence            4666655444333   34678999999998754457889999999999988765668988889999999999999765 6


Q ss_pred             CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCce
Q 014936           96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV  175 (415)
Q Consensus        96 ~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  175 (415)
                      ..+++++|++|+|+++++.+++.++.++||+|+++.|+|..+...++..|.++..++.++++++.+|++.+++.++++++
T Consensus       114 ~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  193 (427)
T 3dyd_A          114 APLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTA  193 (427)
T ss_dssp             BCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEE
T ss_pred             CCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC
Confidence            66789999999999999999999999999999999999999999999999999999987767788999999999988899


Q ss_pred             EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (415)
Q Consensus       176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  255 (415)
                      ++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++....++..+..+.++++++|+||.|+++|+|+|
T Consensus       194 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG  273 (427)
T 3dyd_A          194 CLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLG  273 (427)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCE
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceE
Confidence            99999999999999999999999999999999999999999999887766677777777778999999999999999999


Q ss_pred             EEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      |++++++.... .+++.+.+......+++++++.|.++.++|+....+++++.+++++++++.+.+.|+++|++. +..|
T Consensus       274 ~~~~~~~~~~~-~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~p  351 (427)
T 3dyd_A          274 WILIHDRRDIF-GNEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR-PVRP  351 (427)
T ss_dssp             EEEEECSTTSS-HHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECC
T ss_pred             EEEecCcchhh-HHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCC
Confidence            99997642221 124666666554335788999999999999854568889999999999999999999988887 4479


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      .+|+|+|++++....++..+..+++..+++++||.+.||..|+.++++||+++.+++++++++++|.++++++.
T Consensus       352 ~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~~~  425 (427)
T 3dyd_A          352 SGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACSRIQEFCEQHY  425 (427)
T ss_dssp             SBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHHHHHHHHHHHHC
T ss_pred             CeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHHHHHHHHHHHhh
Confidence            99999999887543333335678888888788999999999988899999999999999999999999987653

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=2e-52  Score=395.20  Aligned_cols=379  Identities=24%  Similarity=0.394  Sum_probs=316.3

Q ss_pred             Cc-cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCc
Q 014936            1 ME-ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL   79 (415)
Q Consensus         1 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~   79 (415)
                      |+ ++++....+++  .+..+.....+..   ..++++++|+.|+|+    +++++.+.+++.+.+... ...|++..|.
T Consensus         1 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~   70 (385)
T 1b5p_A            1 MRGLSRRVQAMKPS--ATVAVNAKALELR---RQGVDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGI   70 (385)
T ss_dssp             CCCCCHHHHHCCCC--HHHHHHHHHHHHH---HTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCC
T ss_pred             CchhhhHHhhcCcc--hHHHHHHHHHHHH---hcCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCC
Confidence            44 56666666676  4555444333322   235678999999874    556789999998887654 3479888899


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (415)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  159 (415)
                      +++|+++++++++.+|..+++++|++|+|+++++.+++.+++++||+|+++.|+|..+...++..|.+++.+++++++++
T Consensus        71 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  150 (385)
T 1b5p_A           71 PELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGF  150 (385)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTT
T ss_pred             HHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCC
Confidence            99999999999988888888999999999999999999999999999999999999999999999999999998765567


Q ss_pred             CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (415)
Q Consensus       160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  239 (415)
                      .+|+++++++++++++++++++||||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..+.. +++++
T Consensus       151 ~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~  228 (385)
T 1b5p_A          151 VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLT  228 (385)
T ss_dssp             CCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEE
T ss_pred             CCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEE
Confidence            899999999998889999999999999999999999999999999999999999999988876 4445555544 68999


Q ss_pred             EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCC--cHHHHHHHHHHHHHHH
Q 014936          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQP--DEVFFKKTLNLLKQSV  316 (415)
Q Consensus       240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~  316 (415)
                      ++||||.|+++|+|+||+++++        ++++.+..... .+.+++.+.|.++.++|+..  ..+++++.++++++++
T Consensus       229 ~~s~SK~~~~~G~RiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  300 (385)
T 1b5p_A          229 VNGAAKAFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRR  300 (385)
T ss_dssp             EEESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEechhhcCCcccceEEEEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHH
Confidence            9999999999999999999864        67777766533 34577888999988888641  2467888999999999


Q ss_pred             HHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936          317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~  396 (415)
                      +.+.+.|+++ ++. +..|.+++|+|+.++..   + .+..++...++ ++||.+.||..|+.++++|||++.+++++++
T Consensus       301 ~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~---~-~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~  373 (385)
T 1b5p_A          301 DLLLEGLTAL-GLK-AVRPSGAFYVLMDTSPI---A-PDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRK  373 (385)
T ss_dssp             HHHHHHHHHH-TCC-BCCCSBTTEEEEECTTT---C-SSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHH
T ss_pred             HHHHHHHHHC-CCe-ecCCCeeEEEEEecCCC---C-CCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHH
Confidence            9999999988 777 44788899999888531   1 25677777776 7899999999988788999999999999999


Q ss_pred             HHHHHHHHHH
Q 014936          397 CLDRIKSFYQ  406 (415)
Q Consensus       397 ~l~~l~~~~~  406 (415)
                      ++++|+++++
T Consensus       374 ~l~~l~~~l~  383 (385)
T 1b5p_A          374 ALERFARVLG  383 (385)
T ss_dssp             HHHHGGGGC-
T ss_pred             HHHHHHHHHh
Confidence            9999987764

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=1.4e-50  Score=386.75  Aligned_cols=372  Identities=34%  Similarity=0.602  Sum_probs=311.6

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhh------hCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR------DLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~------~~~~~~~~~~i~i~~  107 (415)
                      ++++++|+.|+|...+.+++++.+++++.+.+.......|++..|..++|+++|+++++      ..|..+++++|++|+
T Consensus        32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~  111 (416)
T 1bw0_A           32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCS  111 (416)
T ss_dssp             CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEES
T ss_pred             CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeC
Confidence            46799999999865445788999999999998765556898878999999999999982      256667889999999


Q ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG  187 (415)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG  187 (415)
                      |+++++.+++.+++++||+|+++.|+|+++...++..|++++.+++++++++.+|+++|++.++++++++++++|+||||
T Consensus       112 g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG  191 (416)
T 1bw0_A          112 GGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCG  191 (416)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCC
Confidence            99999999999999999999999999999999999999999999886655677899999999988889999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC----CcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC-
Q 014936          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK----PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP-  262 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-  262 (415)
                      .++|.+++++|+++|+++|+++|+||+|.++.+++.    ...++..+....++++++|+||.|+++|+|+||++++++ 
T Consensus       192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~  271 (416)
T 1bw0_A          192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH  271 (416)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred             cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence            999999999999999999999999999999888765    445555555555789999999999999999999999764 


Q ss_pred             CCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936          263 CGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM  342 (415)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~  342 (415)
                      ....   .+...++......++++++.|.++.++|+...+.++++..++++++++.+.+.|+++|++. +..|.+|+|+|
T Consensus       272 ~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~~  347 (416)
T 1bw0_A          272 GNGP---SFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLA-PTMPRGAMYLM  347 (416)
T ss_dssp             CSCH---HHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEE-ECCCCBTTEEE
T ss_pred             hhHH---HHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEE
Confidence            2111   2333333332234678889999999999865568889999999999999999999988887 44678899999


Q ss_pred             EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      ++++...+++..+..++...+++++||.+.||..|+.++++||+++.+++++++++++|.+++++..
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~~e~l~~~l~~l~~~l~~~~  414 (416)
T 1bw0_A          348 SRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHA  414 (416)
T ss_dssp             EEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred             EeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence            8886432221125667778877778999999999887889999999889999999999999987643

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=1.8e-50  Score=382.37  Aligned_cols=384  Identities=22%  Similarity=0.364  Sum_probs=318.4

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |.+|++.....++  .+..+.....+..   ..++++++|+.|.+.    +++++.+.+++.+.+... ...|++..|..
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~   70 (388)
T 1j32_A            1 MKLAARVESVSPS--MTLIIDAKAKAMK---AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEP   70 (388)
T ss_dssp             CCCCHHHHTSCCC--SSTTTHHHHHHHH---TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred             CchhhHhHhCCcc--HHHHHHHHHHHHH---hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence            6677777666666  3333333222222   246789999999864    556789999999988654 35798888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      ++|+++++++.+.+|..+++++|++|+|+++++..+++++.++||+|+++.|+|+++...++..|.+++.++.++++++.
T Consensus        71 ~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~  150 (388)
T 1j32_A           71 RLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFK  150 (388)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTC
T ss_pred             HHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCC
Confidence            99999999999878877889999999999999999999999999999999999999999999999999999886545677


Q ss_pred             CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeE
Q 014936          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPIL  238 (415)
Q Consensus       161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i  238 (415)
                      +|+++|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+..  .++++
T Consensus       151 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (388)
T 1j32_A          151 VSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSV  230 (388)
T ss_dssp             CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEE
T ss_pred             CCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEE
Confidence            9999999999888999999999999999999999999999999999999999999999887665555555442  34689


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD  317 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  317 (415)
                      ++.|+||.|+++|+|+||+++++        ++++.+.... ..+.+++++.+.++..+|+.. .+++++.+++++++++
T Consensus       231 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~  301 (388)
T 1j32_A          231 VCSGFAKTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRR  301 (388)
T ss_dssp             EEEESTTTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHH
T ss_pred             EEeechhccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHH
Confidence            99999999988999999999865        6777776653 234567888898888888743 4778899999999999


Q ss_pred             HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHH
Q 014936          318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEEC  397 (415)
Q Consensus       318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~  397 (415)
                      ++.+.|+++|++. +..|.+++++|++++..   + .+..++...+++++||.+.||..|+.++++|++++.++++++++
T Consensus       302 ~l~~~L~~~~g~~-~~~~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~  376 (388)
T 1j32_A          302 YMLDALNAMPGLE-CPKPDGAFYMFPSIAKT---G-RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRG  376 (388)
T ss_dssp             HHHHHHHTCTTCB-CCCCCBTTEECCBCGGG---T-CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHH
T ss_pred             HHHHHHhhCCCCc-ccCCCeeEEEEEecCCC---C-CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHH
Confidence            9999999988888 44778888899877531   1 25677777776667999999998887899999999899999999


Q ss_pred             HHHHHHHHHHH
Q 014936          398 LDRIKSFYQRH  408 (415)
Q Consensus       398 l~~l~~~~~~~  408 (415)
                      +++|+++++++
T Consensus       377 ~~~l~~~l~~~  387 (388)
T 1j32_A          377 MERLEKFLHGI  387 (388)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999988753

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=6.9e-50  Score=378.80  Aligned_cols=378  Identities=21%  Similarity=0.342  Sum_probs=307.7

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |.++ +.....++  .+........+..   .++++++||+.|++.    +++++.+++++.+.+.... ..|++..|..
T Consensus         3 ~~~~-~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~   71 (391)
T 3h14_A            3 LKNS-SRSAVDPF--IVMDVMEAARRAE---EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLP   71 (391)
T ss_dssp             CCCC-STTCCCCC--TTHHHHHHHHHHH---HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCH
T ss_pred             chhh-hHhhcCcc--hHHHHHHHHHHHH---hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChH
Confidence            4566 66677776  4444443322221   347889999999865    6678999999999887643 5898888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      ++|+++++++++.+|.++++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.++..+++++++++.
T Consensus        72 ~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~  151 (391)
T 3h14_A           72 ALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQ  151 (391)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTS
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence            99999999999888888899999999999999999999999999999999999999999999999999999987766778


Q ss_pred             CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (415)
Q Consensus       161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (415)
                      +|++++++.   +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++... ++..+  .++++++
T Consensus       152 ~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~  225 (391)
T 3h14_A          152 PVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVI  225 (391)
T ss_dssp             CCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEE
T ss_pred             CCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEE
Confidence            899999887   78899999999999999999999999999999999999999999988876532 22222  4568999


Q ss_pred             ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  319 (415)
                      +|+||.++++|+|+||+++++        ++++.+.... ..+.+++++.+.++.++++  ..+++++.+++++++++.+
T Consensus       226 ~s~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l  295 (391)
T 3h14_A          226 NSFSKYFSMTGWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLM  295 (391)
T ss_dssp             EESSSTTCCTTSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred             EechhccCCccceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHH
Confidence            999999989999999999865        5667776653 3356788899999888887  4688999999999999999


Q ss_pred             HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEeeCChhhHHH
Q 014936          320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~l~~  396 (415)
                      .+.|+++ ++..+..|.+++++|+.++...    .+..++...+++++||.+.||..|+.   ++++||+++.+++++++
T Consensus       296 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~  370 (391)
T 3h14_A          296 LERLPKA-GFTRIAPPDGAFYVYADVSDLT----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEE  370 (391)
T ss_dssp             HHHHHHH-TCCCBCCCCBTTEEEEECTTTC----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHH
T ss_pred             HHHHHHc-CCCcccCCCeeEEEEEecCccC----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHH
Confidence            9999987 4432447888899999886421    25678888887777999999999876   57999999889999999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRHAK  410 (415)
Q Consensus       397 ~l~~l~~~~~~~~~  410 (415)
                      ++++|++++++...
T Consensus       371 ~l~~l~~~~~~~~~  384 (391)
T 3h14_A          371 GLDRLEAFMQARGE  384 (391)
T ss_dssp             HHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHhcc
Confidence            99999999987554

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.4e-49  Score=377.64  Aligned_cols=386  Identities=20%  Similarity=0.307  Sum_probs=300.9

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |.++++.....++  .+........ ++.  ..+++++||+.|.+.    +++++.+++++.+.+.......|++..|..
T Consensus         8 ~~~~~~~~~~~~~--~~~~~~~~~~-~~~--~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~   78 (412)
T 2x5d_A            8 ARRFARIDRLPPY--VFNITAELKM-AAR--RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIP   78 (412)
T ss_dssp             ---------------CHHHHHHHHH-HHH--HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCH
T ss_pred             cchhHHHhhcCch--HHHHHHHHHH-HHh--hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcH
Confidence            4455555555554  3333333222 121  347789999999864    557899999999887654345788778999


Q ss_pred             HHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  159 (415)
                      ++|+.+++++.+.+|..+++ ++|++|+|+++++.+++.++.++||+|+++.|+|+++...++..|.++..++.++++++
T Consensus        79 ~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  158 (412)
T 2x5d_A           79 RLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDF  158 (412)
T ss_dssp             HHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCC
Confidence            99999999998877877788 79999999999999999999999999999999999999999999999999998654456


Q ss_pred             CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (415)
Q Consensus       160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i  238 (415)
                      .+|++.+++++++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+++....++..+.. .++++
T Consensus       159 ~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i  238 (412)
T 2x5d_A          159 FNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAV  238 (412)
T ss_dssp             HHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEE
T ss_pred             CCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEE
Confidence            67899999999888899999999999999999999999999999999999999999999887655555555532 45789


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD  317 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  317 (415)
                      ++.|+||.|+++|+|+||+++++        ++++.+..... .+++.+++.+.++..+|+.. ++++++.+++++++++
T Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~  309 (412)
T 2x5d_A          239 EFFTLSKSYNMAGWRIGFMVGNP--------ELVSALARIKSYHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRD  309 (412)
T ss_dssp             EEEECC-CCSCTTSCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHH
T ss_pred             EEecCccccCCcccceEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHH
Confidence            99999999988999999999854        67777766532 35678899999999999754 3678899999999999


Q ss_pred             HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHH
Q 014936          318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLE  395 (415)
Q Consensus       318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~  395 (415)
                      .+.+.|+++ ++. +..|.+|+|+|++++... . ..+..++...+++++||.+.||..|+.  .+++||+++.++++++
T Consensus       310 ~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~  385 (412)
T 2x5d_A          310 VLVKGLREA-GWM-VENPKASMYVWAKIPEPY-A-HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLR  385 (412)
T ss_dssp             HHHHHHHHH-TCC-CCCCSBSSEEEEECCTTT-G-GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHH
T ss_pred             HHHHHHHHC-CCE-ecCCCeeeEEEEEcCCcc-C-CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHH
Confidence            999999987 777 446778899999886310 0 014667778877778999999988864  5799999988999999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRH  408 (415)
Q Consensus       396 ~~l~~l~~~~~~~  408 (415)
                      +++++|.++++++
T Consensus       386 ~~l~~l~~~l~~~  398 (412)
T 2x5d_A          386 QAVRGIKAMFRAD  398 (412)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999998763

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=5.8e-49  Score=372.25  Aligned_cols=379  Identities=25%  Similarity=0.447  Sum_probs=314.8

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |.+|++....+++  .+.++.....+       .+++++|+.|.++    +++++.+.+++.+.+.... ..|++..|..
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~   66 (389)
T 1gd9_A            1 MALSDRLELVSAS--EIRKLFDIAAG-------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKGL-THYGPNIGLL   66 (389)
T ss_dssp             -CHHHHHHHSCCC--HHHHHHHHHHT-------CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCH
T ss_pred             CchhhHhHhCChh--HHHHHHHHHhh-------hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCCcH
Confidence            6677777777777  56655553321       2468999999864    5568999999999887643 4788878999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~-i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  159 (415)
                      ++|+++++++.+.+|..+++++ +++|+|+++++..++.++.++||+|+++.|+|+++...++..|.++..++.++++++
T Consensus        67 ~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~  146 (389)
T 1gd9_A           67 ELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEF  146 (389)
T ss_dssp             HHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCC
Confidence            9999999999887787778899 999999999999999999999999999999999999999999999999998654567


Q ss_pred             CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeE
Q 014936          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (415)
Q Consensus       160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i  238 (415)
                      .+|+++|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++
T Consensus       147 ~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (389)
T 1gd9_A          147 RLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTI  226 (389)
T ss_dssp             CCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEE
T ss_pred             CCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEE
Confidence            78999999999888899999999999999999999999999999999999999999998887653444544432 45689


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSV  316 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~  316 (415)
                      +++|+||.|+++|+|+||+++++        ++++.+..... .+++.+++.+.++.++|+.... .++++.++++++++
T Consensus       227 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  298 (389)
T 1gd9_A          227 TVNGFSKTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRR  298 (389)
T ss_dssp             EEEESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred             EEecChhhcCCcccceEEEEECH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHH
Confidence            99999999988999999999864        67777776533 3467788999999999976321 27888999999999


Q ss_pred             HHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhH
Q 014936          317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSL  394 (415)
Q Consensus       317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l  394 (415)
                      +.+.+.|+++ ++. +..|.+|+++|++++..   + .+..++...+++++||.+.||..|+.  ++++||+++.+++++
T Consensus       299 ~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i  372 (389)
T 1gd9_A          299 KLVWKRLNEM-GLP-TVKPKGAFYIFPRIRDT---G-LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKL  372 (389)
T ss_dssp             HHHHHHHHHT-TCC-CCCCCBTTEECCBCGGG---T-CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHH
T ss_pred             HHHHHHHHHc-CCe-ecCCCeeeEEEEeccCC---C-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHH
Confidence            9999999988 787 44678888999888531   1 25667777776578999999988864  679999998899999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          395 EECLDRIKSFYQR  407 (415)
Q Consensus       395 ~~~l~~l~~~~~~  407 (415)
                      ++++++|.+++++
T Consensus       373 ~~~l~~l~~~~~~  385 (389)
T 1gd9_A          373 EEAMDRMERVLKE  385 (389)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998864

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=1.3e-49  Score=380.78  Aligned_cols=381  Identities=22%  Similarity=0.365  Sum_probs=319.2

Q ss_pred             ccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcH
Q 014936            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLP   80 (415)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~y~~~~g~~   80 (415)
                      .++++.....++  .+.++....        .+.++++|+.|+|+    +++++.+++++.+.+.... ...|++..|..
T Consensus         5 ~~~~~~~~~~~~--~~~~~~~~~--------~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~   70 (422)
T 3fvs_A            5 LQARRLDGIDYN--PWVEFVKLA--------SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYP   70 (422)
T ss_dssp             CSCGGGTTCCCC--HHHHHHHHH--------HTSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCH
T ss_pred             hHHHHhhccCcc--HHHHHHHHh--------hcCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCH
Confidence            456666666666  555554421        24678999999965    6788999999999987644 45899888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC----
Q 014936           81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP----  155 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~----  155 (415)
                      ++|+++++++++.+|..+++ ++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.++..+++++    
T Consensus        71 ~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  150 (422)
T 3fvs_A           71 PLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQ  150 (422)
T ss_dssp             HHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCC
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccc
Confidence            99999999999888888888 7999999999999999999999999999999999999999999999999999865    


Q ss_pred             ------CCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc
Q 014936          156 ------DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG  229 (415)
Q Consensus       156 ------~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  229 (415)
                            ..++.+|+++++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++.
T Consensus       151 ~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  230 (422)
T 3fvs_A          151 NGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIA  230 (422)
T ss_dssp             SSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred             ccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChh
Confidence                  23567899999999998999999999999999999999999999999999999999999999998877666666


Q ss_pred             ccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCC------Cc
Q 014936          230 VFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQ------PD  301 (415)
Q Consensus       230 ~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~------~~  301 (415)
                      .+.. .++++++.|+||.|+++|+|+||+++++        ++++.+..... ..++++++.+.++..+|+.      ..
T Consensus       231 ~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  302 (422)
T 3fvs_A          231 SLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQP  302 (422)
T ss_dssp             GSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCT
T ss_pred             hcccccCcEEEEecchhccCCccceEEEEEeCH--------HHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccch
Confidence            6543 3678999999999999999999999865        67777766532 3567788999998888863      12


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCC---------HHHHHHHHHhhcCeEEE
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIID---------DIDFCFKLAKEESVIIL  372 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~---------~~~~~~~ll~~~gi~v~  372 (415)
                      +.++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++..... ..+         ..+++..+++++||.+.
T Consensus       303 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gv~v~  379 (422)
T 3fvs_A          303 SSYFVQFPQAMQRCRDHMIRSLQSV-GLK-PIIPQGSYFLITDISDFKRK-MPDLPGAVDEPYDRRFVKWMIKNKGLVAI  379 (422)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECHHHHHH-CCCCCCCTTCCHHHHHHHHHHHHHCEECE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCCeeeEEEEechhhccc-ccccccccccccHHHHHHHHHHhcCEEEe
Confidence            4678899999999999999999998 787 44889999999988542110 001         45788888888899999


Q ss_pred             cCCCCCC-------CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          373 PGTAVGL-------KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       373 ~g~~~~~-------~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ||+.|+.       .+++||+++.+++++++++++|++++++
T Consensus       380 ~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          380 PVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             EGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred             CcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence            9998853       6899999988999999999999988753

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=2.7e-49  Score=375.61  Aligned_cols=381  Identities=21%  Similarity=0.370  Sum_probs=307.9

Q ss_pred             CccccCCccC--CcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCC
Q 014936            1 MEISNGGIDN--TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGYAP   75 (415)
Q Consensus         1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~y~~   75 (415)
                      |.+|.++.+.  .++  .++++..... ......++++++||+.|+|.    +++++.+.+++.+.+....   ...|++
T Consensus         2 ~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~   74 (398)
T 3ele_A            2 MVVNESMYQLGSVRS--AIRELFEYGK-KRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTS   74 (398)
T ss_dssp             CSSCHHHHHHHHCCC--HHHHHHHHHH-HHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCC
T ss_pred             cchhHHHhccccCch--hHHHHHHHHH-HHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCC
Confidence            6777777776  355  4555443222 11111245789999999765    5678999999999887532   457988


Q ss_pred             CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936           76 TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (415)
Q Consensus        76 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~  154 (415)
                      ..|..++|+++++++++.+|.++++++|++|+|+++++..++.+++++| |+|+++.|+|+.+...++..|.++..++++
T Consensus        75 ~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~  154 (398)
T 3ele_A           75 AQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPAD  154 (398)
T ss_dssp             TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC
Confidence            8899999999999999888888899999999999999999999999999 999999999999999999999999999986


Q ss_pred             CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh------cCcEEEEccccCCcccCCCCcccc
Q 014936          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK------LKTLVIADEVYGHLVFGDKPFVPM  228 (415)
Q Consensus       155 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~  228 (415)
                      + +++.+|+++|+++++++++++++++|+||||.+++.+++++|+++|++      +|+++|+||+|+.+.+++......
T Consensus       155 ~-~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~  233 (398)
T 3ele_A          155 T-EHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV  233 (398)
T ss_dssp             T-TTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG
T ss_pred             C-cCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCCh
Confidence            4 367899999999999899999999999999999999999999999999      999999999999998876543332


Q ss_pred             cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      .  ...+++++++|+||.|+++|+|+||+++++..  .....+.+.+.....  .+.+++.+.+.++..+++...     
T Consensus       234 ~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----  304 (398)
T 3ele_A          234 T--KYYDNTLVCYSYSKSLSLPGERIGYVLVPDEV--YDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-----  304 (398)
T ss_dssp             G--GTCSSEEEEEESTTTSSCTTTCCEEEECCTTS--TTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-----
T ss_pred             H--hhcCCeEEEEehhhcCCCccceeEEEEEcchh--hhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-----
Confidence            2  23357899999999998999999999997632  111124444443322  135667788888888887542     


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEE
Q 014936          307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT  386 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~  386 (415)
                       .+++++++++.+.+.|+++ ++. +..|.+++++|++++.      .+..++... +.++||.+.||..|+.++++||+
T Consensus       305 -~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~------~~~~~~~~~-l~~~gi~v~~g~~~~~~~~iRis  374 (398)
T 3ele_A          305 -DINAYKENRDLLYEGLTRI-GYH-CFKPDGAFYMFVKALE------DDSNAFCEK-AKEEDVLIVAADGFGCPGWVRIS  374 (398)
T ss_dssp             -CHHHHHHHHHHHHHHHHHH-TCC-EECCSBSSEEEEECSS------SCHHHHHHH-HHTTTEECEESGGGTCTTEEEEE
T ss_pred             -HHHHHHHHHHHHHHHHHHc-CCe-ecCCCeeEEEEEEcCC------CCHHHHHHH-HHHCCEEEeCccccCCCCeEEEE
Confidence             3567788888899999887 777 4478889999998864      145666665 46789999999999888999999


Q ss_pred             eeCChhhHHHHHHHHHHHHHHH
Q 014936          387 FAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       387 ~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ++.+++++++++++|.++++++
T Consensus       375 ~~~~~e~i~~~l~~l~~~l~~~  396 (398)
T 3ele_A          375 YCVDREMIKHSMPAFEKIYKKY  396 (398)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999998765

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=6.3e-49  Score=377.71  Aligned_cols=354  Identities=22%  Similarity=0.330  Sum_probs=299.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      ++++|+|+.|.|+..  +.+++.+.+++.+.+...  ....|+++.|.++||+++++++++.+|.. ++++|++|+|+++
T Consensus        75 ~~~~i~l~~g~p~~~--~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~  151 (448)
T 3aow_A           75 TSDIISLAGGLPNPK--TFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQ  151 (448)
T ss_dssp             TSSSEECCCCCCCGG--GSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHH
T ss_pred             CCCcEeCCCCCCCch--hCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHH
Confidence            456899999998632  446788999998887653  23479888899999999999997767766 7899999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----C--CceEE-EecCCCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----Q--NTVAL-VIINPGN  184 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~--~~~~v-~i~~p~n  184 (415)
                      ++..++++++++||+|+++.|+|+++...++..|++++.++.+++   ++|+++|+++++    +  ++++| ++++|+|
T Consensus       152 al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~N  228 (448)
T 3aow_A          152 ALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQN  228 (448)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred             HHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCC
Confidence            999999999999999999999999999999999999999988542   489999999886    5  67887 5789999


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  264 (415)
                      |||.++|.+++++|+++|+++|+++|+||+|..+.+++....++..++..++++++.||||.|+ +|+|+||+++++   
T Consensus       229 PtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~---  304 (448)
T 3aow_A          229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP---  304 (448)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEECH---
T ss_pred             CcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeCH---
Confidence            9999999999999999999999999999999999988766666777766678999999999988 999999999965   


Q ss_pred             CCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhc-CC-CCcCCCCCCCceE
Q 014936          265 MFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKE-IP-CISCPHKPEGSMA  340 (415)
Q Consensus       265 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~-~~~~~~~p~~g~~  340 (415)
                           ++++.+..... .+.+++++.|.++.++|+... ++++++.++.++++++.+.+.|++ +| ++. +..|.+|+|
T Consensus       305 -----~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~-~~~p~~g~~  378 (448)
T 3aow_A          305 -----GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVK-WTKPEGGMF  378 (448)
T ss_dssp             -----HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE-ECCCSBSSE
T ss_pred             -----HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE-EeCCCccEE
Confidence                 67777766532 345678899999999997642 477888899999999999999986 67 577 447889999


Q ss_pred             EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeC-ChhhHHHHHHHHHHHHHHHH
Q 014936          341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAV-DPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~-~~~~l~~~l~~l~~~~~~~~  409 (415)
                      +|++++..     .+..+++..++++ ||.+.||..|+.    ++++|++++. +++++++++++|.+++++..
T Consensus       379 ~~v~~~~~-----~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~~~  446 (448)
T 3aow_A          379 IWVTLPDG-----IDSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEEL  446 (448)
T ss_dssp             EEEECSTT-----CCHHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCC-----CCHHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999642     2567777777655 999999988853    5799999975 78999999999999987654

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.8e-49  Score=379.77  Aligned_cols=356  Identities=24%  Similarity=0.384  Sum_probs=299.9

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .++++|||+.|.|+    +++++.+.+++.+++.......|++..|.+++|+++++++.+.+|.++++++|++|+|++++
T Consensus        55 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~a  130 (447)
T 3b46_A           55 QGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG  130 (447)
T ss_dssp             TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred             cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            46789999999875    56789999999998875334589888899999999999999888888888999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC----------CCCCChhHHHhhcCCCceEEEecCC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK----------GWEVDLDDIESLADQNTVALVIINP  182 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~v~i~~p  182 (415)
                      +..++.+++++||+|+++.|+|+.+...++..|.+++.++.++++          +|.+|+++|+++++++++++++++|
T Consensus       131 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p  210 (447)
T 3b46_A          131 ILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTP  210 (447)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESS
T ss_pred             HHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCC
Confidence            999999999999999999999999999999999999999876543          5779999999999888999999999


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc--CCCCCeEEEccCccccCCCCceEEEEEe-
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--GSTVPILTLGSLSKRWIVPGWRLGWFVT-  259 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~-  259 (415)
                      +||||.++|.+++++|+++|++||+++|+||+|.++.+++ ...++..+  +..++++++.|+||.|+++|+|+||+++ 
T Consensus       211 ~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~  289 (447)
T 3b46_A          211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSL  289 (447)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECS
T ss_pred             CCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeC
Confidence            9999999999999999999999999999999999998876 33344444  1235789999999999999999999998 


Q ss_pred             eCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          260 TDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      ++        ++++.+.... ...++.+++.|.++.++|+... ++++++.+++++++++.+.+.|+++ ++. +..|.+
T Consensus       290 ~~--------~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~  359 (447)
T 3b46_A          290 NA--------ELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLP-YTAPEG  359 (447)
T ss_dssp             CH--------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCC-EECCSB
T ss_pred             CH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCe
Confidence            54        6777776653 3356778889999888887532 4568889999999999999999987 777 447889


Q ss_pred             ceEEEEecCccccCC----------CCCHHHHHHHHHhhcCeEEEcCCCCCC-------CCeEEEEeeCChhhHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDD----------IIDDIDFCFKLAKEESVIILPGTAVGL-------KNWLRVTFAVDPYSLEECLDR  400 (415)
Q Consensus       338 g~~~~~~l~~~~~~~----------~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~~~~~~~~l~~~l~~  400 (415)
                      |+|+|++++....+.          ..++.+++..+++++||.+.||+.|+.       .+++||+++.+++++++++++
T Consensus       360 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~  439 (447)
T 3b46_A          360 TYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVER  439 (447)
T ss_dssp             SSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHH
T ss_pred             eEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHH
Confidence            999999986421110          113557777787778999999988763       589999998899999999999


Q ss_pred             HHH
Q 014936          401 IKS  403 (415)
Q Consensus       401 l~~  403 (415)
                      |.+
T Consensus       440 l~~  442 (447)
T 3b46_A          440 LKL  442 (447)
T ss_dssp             GGG
T ss_pred             HHH
Confidence            976

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.8e-48  Score=367.40  Aligned_cols=347  Identities=27%  Similarity=0.439  Sum_probs=297.2

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .++++++|+.|.+.    +++++.+.+++.+.+.... ..|++..|..++|+++++++++.+|..++++++++|+|++++
T Consensus        39 ~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~a  113 (389)
T 1o4s_A           39 KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQA  113 (389)
T ss_dssp             TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHH
T ss_pred             cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHH
Confidence            36789999999864    5567999999999887543 478887899999999999998877877788999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.++.++||+|+++.|+|+++...++..|.++..++.++++++.+|+++|+++++++++++++++|+||||.++|.
T Consensus       114 l~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~  193 (389)
T 1o4s_A          114 LFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR  193 (389)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999998654567889999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++|+++|+||+|+.+.+++ ...++..+.. .+++++++|+||.|+++|+|+||+++++        ++
T Consensus       194 ~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~--------~~  264 (389)
T 1o4s_A          194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE--------KV  264 (389)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCH--------HH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCH--------HH
Confidence            999999999999999999999999988765 2334444432 4568999999999988999999999865        67


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+..... .+.+++++.+.++.++|+..    +++.+++++++++++.+.|+++ ++. +..|.+++++|++++    
T Consensus       265 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~----  334 (389)
T 1o4s_A          265 ATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERLKKM-GVK-FVEPEGAFYLFFKVR----  334 (389)
T ss_dssp             HHHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCSBSSEEEEECS----
T ss_pred             HHHHHHHhhhcccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhc-CCe-eecCCcceEEEEeCC----
Confidence            777766532 34567888999998898763    6788889999999999999988 777 446788899998885    


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                         .+..++...+++++||.+.||..|+.++++|++++.+++++++++++|.++++
T Consensus       335 ---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          335 ---GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN  387 (389)
T ss_dssp             ---SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             ---CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHHHHh
Confidence               14677778776578999999998887789999998899999999999998764

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=2.6e-48  Score=368.60  Aligned_cols=348  Identities=22%  Similarity=0.350  Sum_probs=297.6

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCC-cEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPN-DVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~-~i~i~~g~  109 (415)
                      ..++++|||+.|++.    +++++.+++++.+.+.  ....|++..|..++|+++++++++.+|.. ++++ +|++|+|+
T Consensus        27 ~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~  100 (396)
T 3jtx_A           27 PEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGS  100 (396)
T ss_dssp             CTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSH
T ss_pred             ccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCc
Confidence            357899999999964    6678999999998875  34589988899999999999999888876 7888 99999999


Q ss_pred             HHHHHHHHHHhcCCC-----CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCC
Q 014936          110 TQAIDVAMALLSRPG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN  184 (415)
Q Consensus       110 ~~al~~~~~~l~~~g-----d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~n  184 (415)
                      ++++.+++.++.++|     |+|+++.|+|+.+...++..|.++..++. .++++.+|+++|+++++++++++++++|+|
T Consensus       101 ~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~d~~~l~~~~~~~~~~v~l~~p~n  179 (396)
T 3jtx_A          101 REALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNPDWRSISEEVWKRTKLVFVCSPNN  179 (396)
T ss_dssp             HHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCCCGGGSCHHHHHTEEEEEEESSCT
T ss_pred             HHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCccCHHHHHHhhccCcEEEEEECCCC
Confidence            999999999999997     79999999999999999999999999998 445677899999998888899999999999


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc----cC-CCCCeEEEccCccccCCCCceEEEEEe
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV----FG-STVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~----~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      |||.+++.+++++|+++|+++|+++|+||+|+++.+++........    +. ..++++++.|+||.|+++|+|+||+++
T Consensus       180 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (396)
T 3jtx_A          180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG  259 (396)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE
T ss_pred             CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEe
Confidence            9999999999999999999999999999999998887632222211    11 246789999999999999999999988


Q ss_pred             eCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936          260 TDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS  338 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  338 (415)
                      ++        ++++.+.... ..+++++++.|.++..+|+.  .+++++.+++++++++.+.+.|+++  +. +..|.+|
T Consensus       260 ~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~~~~  326 (396)
T 3jtx_A          260 DA--------ELLKNFLLYRTYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVIPILQQV--FD-VKLPDAS  326 (396)
T ss_dssp             CH--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHTTT--SC-CCCCSSS
T ss_pred             CH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhc--CC-ccCCCee
Confidence            54        6778777653 33567889999999999875  4788999999999999999999876  33 3378889


Q ss_pred             eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--------CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--------KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                      +|+|++++.      .+..++...+++++||.+.||..|+.        .+++||+++.+++++++++++|++++
T Consensus       327 ~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l  395 (396)
T 3jtx_A          327 FYIWLKVPD------GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLY  395 (396)
T ss_dssp             SEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHHHC
T ss_pred             EEEEEECCC------CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            999999874      25678888887888999999998874        47999999889999999999998764

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=1.1e-48  Score=372.79  Aligned_cols=356  Identities=22%  Similarity=0.371  Sum_probs=304.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~  111 (415)
                      .+.++|+|+.|+|+    +++++.+++++.+.+.......|++..|..++|+++++++++.+|..+++ ++|++|+|+++
T Consensus        21 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~   96 (410)
T 3e2y_A           21 ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYG   96 (410)
T ss_dssp             TSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHH
T ss_pred             cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHH
Confidence            35789999999965    77889999999999876555689988899999999999999888888888 89999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC---------CCCCCCChhHHHhhcCCCceEEEecCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP---------DKGWEVDLDDIESLADQNTVALVIINP  182 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~v~i~~p  182 (415)
                      ++..++.+++++||+|+++.|+|+.+...++..|.++..+++++         ..++.+|++++++++++++++|++++|
T Consensus        97 a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p  176 (410)
T 3e2y_A           97 SLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTP  176 (410)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESS
T ss_pred             HHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCC
Confidence            99999999999999999999999999999999999999998763         234668999999999888999999999


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      +||||.+++.+++++|+++|+++|+++|+||+|+++.+++....++..+.. .++++++.|+||.|+++|+|+||+++++
T Consensus       177 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~  256 (410)
T 3e2y_A          177 HNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPA  256 (410)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCH
T ss_pred             CCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECH
Confidence            999999999999999999999999999999999999988766656655542 3678999999999999999999999865


Q ss_pred             CCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCC------CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          262 PCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQ------PDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                              ++++.+.... ..+++++++.+.++..+|+.      ....++++.+++++++++.+.+.|+++ ++. +..
T Consensus       257 --------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~  326 (410)
T 3e2y_A          257 --------HLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK-PIV  326 (410)
T ss_dssp             --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEB
T ss_pred             --------HHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecC
Confidence                    6777776653 33567788999999888862      224678899999999999999999998 787 458


Q ss_pred             CCCceEEEEecCccccCCC-------CCHHHHHHHHHhhcCeEEEcCCCCCC-------CCeEEEEeeCChhhHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLLDDI-------IDDIDFCFKLAKEESVIILPGTAVGL-------KNWLRVTFAVDPYSLEECLDR  400 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~~~~-------~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~~~~~~~~l~~~l~~  400 (415)
                      |.+|+|+|+++..... +.       .++.+++..+++++||.+.||+.|+.       .+++||+++.+++++++++++
T Consensus       327 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~l~~~l~~  405 (410)
T 3e2y_A          327 PDGGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEI  405 (410)
T ss_dssp             CSBSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCCCHHHHHHHHHH
T ss_pred             CCccEEEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcCCHHHHHHHHHH
Confidence            8999999998854211 01       11347778888888999999998863       489999999999999999999


Q ss_pred             HHH
Q 014936          401 IKS  403 (415)
Q Consensus       401 l~~  403 (415)
                      |++
T Consensus       406 l~~  408 (410)
T 3e2y_A          406 FRA  408 (410)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            875

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=7.9e-48  Score=364.06  Aligned_cols=349  Identities=23%  Similarity=0.391  Sum_probs=296.6

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI  113 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al  113 (415)
                      .++++|+.|.++    +++++.+.+++.+.+... ...|++..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus        30 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~  104 (386)
T 1u08_A           30 HQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL  104 (386)
T ss_dssp             TTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred             CCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence            468999999864    557899999999988753 35788878899999999999988778778898 999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.++.++||+|+++.|+|+.+...++..|.++..++.+++ ++.+|+++|+++++++++++++++|+||||.++|.+
T Consensus       105 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~  183 (386)
T 1u08_A          105 YAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA  183 (386)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHH
Confidence            9999999999999999999999999999999999999998543 467999999999988899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++++|+++|+++|+++|+||+|+.+.+++....++..+. ..++++++.|+||.|+++|+|+||+++++        +++
T Consensus       184 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~  255 (386)
T 1u08_A          184 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PIS  255 (386)
T ss_dssp             HHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HHH
T ss_pred             HHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH--------HHH
Confidence            999999999999999999999999988766555554442 23568999999999988999999999865        677


Q ss_pred             HHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          273 ERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       273 ~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      +.+..... ..++.+++.|.++..+|+.. ++++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++...  
T Consensus       256 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~--  330 (386)
T 1u08_A          256 AEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS--  330 (386)
T ss_dssp             HHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC--
T ss_pred             HHHHHHHHhhccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCceEEEEEecCCCC--
Confidence            77766532 34667888888888888754 5788899999999999999999988 777 446778899999886420  


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCC----CCCeEEEEeeCChhhHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVG----LKNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                       ..+..++...+++++||.+.||..|+    .++++||+++.+++++++++++|++
T Consensus       331 -~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~  385 (386)
T 1u08_A          331 -TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ  385 (386)
T ss_dssp             -CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred             -CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence             01466777778777899999998775    3679999998899999999999864

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=5.4e-49  Score=373.98  Aligned_cols=352  Identities=20%  Similarity=0.299  Sum_probs=297.5

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~a  112 (415)
                      +++++||+.|.+.    +++++.+++++.+.+.......|++..|..++|+++++++.+.+|..+++ ++|++|+|++++
T Consensus        46 g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~a  121 (404)
T 2o1b_A           46 PLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNG  121 (404)
T ss_dssp             SSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHH
T ss_pred             CCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHH
Confidence            5678999999874    55679999999998764334478887899999999999998877877776 799999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +.+++.++.++||+|+++.|+|+++...++..|.+++.++.++ +++.+|+++|+++++++++++++++|+||||.++|.
T Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  200 (404)
T 2o1b_A          122 LVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATK  200 (404)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCH
Confidence            9999999999999999999999999999999999999999865 456789999998887778999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++|+++|+||+|..+.+++ ...++..+. ..++++++.|+||.|+++|+|+||+++++        ++
T Consensus       201 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~  271 (404)
T 2o1b_A          201 EVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNK--------DM  271 (404)
T ss_dssp             HHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECH--------HH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCH--------HH
Confidence            999999999999999999999999988765 233333332 22467999999999988999999999854        67


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+..... .+.+++++.|.++.++|+.. +.++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++..  
T Consensus       272 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~--  346 (404)
T 2o1b_A          272 IQALKKYQTHTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKA-DLP-FVHAKGGIYVWLETPPG--  346 (404)
T ss_dssp             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EECCCBSSEEEEECCTT--
T ss_pred             HHHHHHHHhhccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhc-CCe-ecCCCcceEEEEeCCCC--
Confidence            777776532 34678889999999998754 5788999999999999999999988 777 44677888999988631  


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                         .+..++...+++++||.+.||..|+.  ++++||+++.+++++++++++|++++++
T Consensus       347 ---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~~l~~  402 (404)
T 2o1b_A          347 ---YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYL  402 (404)
T ss_dssp             ---CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGGGG
T ss_pred             ---CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence               24667788877778999999998874  6899999988889999999999887654

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=3.9e-48  Score=368.79  Aligned_cols=356  Identities=19%  Similarity=0.260  Sum_probs=305.7

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAID  114 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~  114 (415)
                      .++||+.|++.   .+++++.+++++.+.+.......|++..|..++++++++++.+.+|..+++ ++|++|+|+++++.
T Consensus        40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~  116 (407)
T 3nra_A           40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF  116 (407)
T ss_dssp             CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred             ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence            48999999865   367889999999998875444468888899999999999999888877766 79999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC----CCCCCCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP----DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY  190 (415)
Q Consensus       115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  190 (415)
                      .++.++.++||+|+++.|+|.++...++..|.++..+++++    ++++.+|+++|+++++++++++++++|+||||.++
T Consensus       117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~  196 (407)
T 3nra_A          117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY  196 (407)
T ss_dssp             HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence            99999999999999999999999999999999999999843    35677999999999988899999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC--CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG--STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                      |.+++++|+++|+++|+++|+||+|+.+.+++....++..++  ..++++++.|+||.|+++|+|+||+++++       
T Consensus       197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------  269 (407)
T 3nra_A          197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR-------  269 (407)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH-------
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH-------
Confidence            999999999999999999999999999998877666666653  34578999999999999999999999864       


Q ss_pred             HHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936          269 PKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL  347 (415)
Q Consensus       269 ~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~  347 (415)
                       ++++.+.... ..+.+++++.+.++..+|+.. ..++++.+++++++++.+.+.|+++|++. +..|.+++|+|+.++.
T Consensus       270 -~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~  346 (407)
T 3nra_A          270 -AIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA-PGWMEDRIARHQAIRDELLHVLRGCEGVF-ARTPQAGSYLFPRLPK  346 (407)
T ss_dssp             -HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC-TTHHHHHHHHHHHHHHHHHHHHHTSTTCB-CCCCSBSSEECCBCCC
T ss_pred             -HHHHHHHHHHhhhccCCChHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEeCCC
Confidence             6777777653 334566788888888888742 36788888999999999999999988888 4478888999998864


Q ss_pred             cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ..    .+..++...+++++||.+.||..|+.  .+++||+++.+++++++++++|+++++++
T Consensus       347 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~  405 (407)
T 3nra_A          347 LA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERY  405 (407)
T ss_dssp             BS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred             CC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence            21    25677778777778999999998874  68999999889999999999999998765

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.5e-48  Score=369.47  Aligned_cols=380  Identities=26%  Similarity=0.377  Sum_probs=310.5

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |.+|++.....++  .+..+..     .   ..+.++++|+.|.++    +++++.+.+++.+.+... ...|++..|..
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~-----~---~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~   65 (411)
T 2o0r_A            1 MATVSRLRPYATT--VFAEMSA-----L---ATRIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSA   65 (411)
T ss_dssp             -CCCGGGGGGSSC--HHHHHHH-----H---HHTTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred             CchhhHhHhcCcc--HHHHHHH-----H---hhcCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence            6778887777766  3333322     1   124468999999864    556899999999998753 45898888899


Q ss_pred             HHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC-CC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KG  158 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~  158 (415)
                      ++|+++++++.+.+|.+++++ +|++|+|+++++.+++.++.++||+|+++.|+|+++...++..|.++..++.+++ ++
T Consensus        66 ~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~  145 (411)
T 2o0r_A           66 PLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRG  145 (411)
T ss_dssp             HHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTE
T ss_pred             HHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccC
Confidence            999999999988778778888 9999999999999999999999999999999999999999999999999987653 24


Q ss_pred             CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCe
Q 014936          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPI  237 (415)
Q Consensus       159 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~  237 (415)
                      +.+|+++|++++++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++..+.. .+++
T Consensus       146 ~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~  225 (411)
T 2o0r_A          146 FALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERT  225 (411)
T ss_dssp             EECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred             CCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCE
Confidence            668999999999888999999999999999999999999999999999999999999999887665555555432 3568


Q ss_pred             EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                      +++.|+||.++++|+|+||+++++        ++++.+..... .+++.+++.|.++..+|+.. ++++++.++++++++
T Consensus       226 i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~  296 (411)
T 2o0r_A          226 ITISSAAKMFNCTGWKIGWACGPA--------ELIAGVRAAKQYLSYVGGAPFQPAVALALDTE-DAWVAALRNSLRARR  296 (411)
T ss_dssp             EEEEEHHHHTTCTTTCEEEEECCH--------HHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred             EEEeechhhcCCccceEEEEeeCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHH
Confidence            999999999988999999999854        67777765532 34566778888888888644 577889999999999


Q ss_pred             HHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-------------CCCeE
Q 014936          317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-------------LKNWL  383 (415)
Q Consensus       317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------~~~~i  383 (415)
                      +++.+.|+++ ++. +..|.+|+|+|++++...  + .+..++...+++++||.+.||..|.             ..+++
T Consensus       297 ~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~--~-~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~i  371 (411)
T 2o0r_A          297 DRLAAGLTEI-GFA-VHDSYGTYFLCADPRPLG--Y-DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLV  371 (411)
T ss_dssp             HHHHHHHHHH-TCE-ECCCCBSSEEEEECGGGT--C-CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCE
T ss_pred             HHHHHHHHHc-CCE-ecCCCeeEEEEEecCCCC--C-CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeE
Confidence            9999999987 777 446788889999886410  0 1466777878777899999998772             24689


Q ss_pred             EEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          384 RVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       384 Ri~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      ||+++.+++++++++++|++++++..
T Consensus       372 Ris~~~~~e~i~~~~~~l~~~~~~~~  397 (411)
T 2o0r_A          372 RFTFCKRDDTLDEAIRRLSVLAERPA  397 (411)
T ss_dssp             EEECCSCHHHHHHHHHHHGGGGC---
T ss_pred             EEEecCCHHHHHHHHHHHHHHHhccC
Confidence            99998889999999999998776543

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=1.9e-47  Score=372.06  Aligned_cols=371  Identities=21%  Similarity=0.342  Sum_probs=302.6

Q ss_pred             ceeEecccCCCCCCCCC-------------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFH-------------------------TTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIA   87 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~-------------------------~~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia   87 (415)
                      .+|+..+|+|.....-+                         .++.++++..+.+...   ....|++..|.+++|++++
T Consensus        65 ~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia  144 (500)
T 3tcm_A           65 EILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIA  144 (500)
T ss_dssp             SCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHH
T ss_pred             HhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHH
Confidence            78999999874322211                         3444666666666652   4568999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHH
Q 014936           88 EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI  166 (415)
Q Consensus        88 ~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  166 (415)
                      +++.+..|..+++++|++|+|+++++..++.+++ ++||.|+++.|+|..+...++..|.+++.++.+.+++|.+|+++|
T Consensus       145 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  224 (500)
T 3tcm_A          145 SGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDV  224 (500)
T ss_dssp             HHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHH
T ss_pred             HHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence            9999888888999999999999999999999998 899999999999999999999999999999998877889999999


Q ss_pred             HhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccccc----cc---C
Q 014936          167 ESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMG----VF---G  232 (415)
Q Consensus       167 ~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~----~~---~  232 (415)
                      ++++++      +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ...++.    .+   .
T Consensus       225 ~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~  304 (500)
T 3tcm_A          225 KKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGE  304 (500)
T ss_dssp             HHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSS
T ss_pred             HHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcccc
Confidence            999876      688999999999999999999999999999999999999999999988643 344432    22   2


Q ss_pred             CCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc---------H
Q 014936          233 STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD---------E  302 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---------~  302 (415)
                      ...++++++||||.| +++|+|+||+++...     ++++++.+........+++.+.|.++..++....         .
T Consensus       305 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~  379 (500)
T 3tcm_A          305 EDLPLVSYQSVSKGYYGECGKRGGYFEITGF-----SAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYK  379 (500)
T ss_dssp             SCCCEEEEEESSSTTTCCGGGCCEEEEEESC-----CTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHH
T ss_pred             CCeEEEEEecCCccCCCCCccceEEEEEeCC-----CHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHH
Confidence            334689999999998 889999999998320     1157777776655567788999999999987421         2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc-------cCCCCCHHHHHHHHHhhcCeEEEcCC
Q 014936          303 VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL-------LDDIIDDIDFCFKLAKEESVIILPGT  375 (415)
Q Consensus       303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~-------~~~~~~~~~~~~~ll~~~gi~v~~g~  375 (415)
                      .++++.+++++++++.+.+.|+++|++. +..|++++|+|+++..+.       ..+..++..++..+|+++||.+.||+
T Consensus       380 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~  458 (500)
T 3tcm_A          380 AEKDGILASLARRAKALEHAFNKLEGIT-CNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGS  458 (500)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEEST
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCcE-EecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCc
Confidence            4567778899999999999999998998 458899999996553210       00122244456788888999999999


Q ss_pred             CCCC---CCeEEEEeeCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          376 AVGL---KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       376 ~~~~---~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      .|+.   .++||++++.+++++++++++|+++++++.++.
T Consensus       459 ~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~~~~  498 (500)
T 3tcm_A          459 GFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSEY  498 (500)
T ss_dssp             TTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9985   458999999889999999999999999887764

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=4.4e-48  Score=368.20  Aligned_cols=364  Identities=29%  Similarity=0.494  Sum_probs=301.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .++++++|+.|.|... .+++++.+.+++.+.+.... ..|++..|..++|+++++++++.+|.++++++|++|+|++++
T Consensus        36 ~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a  113 (406)
T 1xi9_A           36 KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEA  113 (406)
T ss_dssp             TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred             cCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHH
Confidence            4678999999987321 25667999999999887543 478887899999999999999888888889999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +.+++.++.++||+|+++.|+|+++...++..|.+++.++.++++++.+|++.|++.++++++++++++|+||||.++|.
T Consensus       114 l~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~  193 (406)
T 1xi9_A          114 LQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDK  193 (406)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCH
Confidence            99999999999999999999999999999999999999998654567789999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC-eEEEccCccccCCCCceEEEEE--eeCCCCCCChH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFV--TTDPCGMFRKP  269 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~--~~~~~~~~~~~  269 (415)
                      +++++|+++|+++|+++|+||+|+.+.+++ ...++..++ .++ +++++|+||.++++|+|+||++  ++++. .   .
T Consensus       194 ~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~-~---~  267 (406)
T 1xi9_A          194 KTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENK-L---S  267 (406)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCT-T---H
T ss_pred             HHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEeccccccCCCccEEEEEEEecCchh-H---H
Confidence            999999999999999999999999988743 333455554 456 8999999999988999999998  53210 0   0


Q ss_pred             HHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          270 KVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      ++++.+.......++++++.+.++.++|+.. .+++++.+++++++++++.+.|+++|++. +..|.+|+++|++++...
T Consensus       268 ~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~  345 (406)
T 1xi9_A          268 EVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGIS-TTKPQGAFYIFPKIEVGP  345 (406)
T ss_dssp             HHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBSSEECCEECSCS
T ss_pred             HHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCe-eecCCeeEEEEEecCccC
Confidence            4666666553322677888999999999643 35688899999999999999999988887 446788889998775310


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                        + .+..++...+++++||.+.||..|+.  .+++||+++.+++++++++++|+++++++.
T Consensus       346 --~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~~~l~~~~  404 (406)
T 1xi9_A          346 --W-KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKERL  404 (406)
T ss_dssp             --C-SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHHHHC-
T ss_pred             --C-CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence              1 24667777777678999999998875  689999999899999999999999987643

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=9.6e-48  Score=373.51  Aligned_cols=370  Identities=22%  Similarity=0.392  Sum_probs=289.8

Q ss_pred             ceeEecccCCCCCCCCCC----------------------cHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHT----------------------THVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYL   90 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~----------------------~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~~   90 (415)
                      +++++.+|+|.... ..+                      +..+.+++.+.+...   ....|++..|.+++|++|++++
T Consensus        64 ~~i~~nig~p~~~~-~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~  142 (498)
T 3ihj_A           64 EVIRANIGDAQAMG-QQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYI  142 (498)
T ss_dssp             SCBCCC-----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHH
T ss_pred             hhhhcCCcCccccc-CCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            89999999985432 212                      344455556666542   3468999999999999999999


Q ss_pred             hhhCC-CCCCCCcEEEeCChHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhH
Q 014936           91 SRDLP-YKLTPNDVFVTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDD  165 (415)
Q Consensus        91 ~~~~~-~~~~~~~i~i~~g~~~al~~~~~~l~~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  165 (415)
                      .+.+| +.+++++|++|+|+++++..++.++.++||    .|+++.|+|+.+...++..|++++.++++++++|.+|+++
T Consensus       143 ~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~  222 (498)
T 3ihj_A          143 TRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNE  222 (498)
T ss_dssp             HHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHH
T ss_pred             HHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHH
Confidence            98884 888999999999999999999999998875    9999999999999999999999999999887789999999


Q ss_pred             HHhhcCC-----CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-CcccccccC-------
Q 014936          166 IESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG-------  232 (415)
Q Consensus       166 l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-------  232 (415)
                      |++++++     +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+.       
T Consensus       223 le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~  302 (498)
T 3ihj_A          223 LRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEY  302 (498)
T ss_dssp             HHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHH
T ss_pred             HHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccc
Confidence            9998876     589999999999999999999999999999999999999999999998754 444544431       


Q ss_pred             -CCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCC------cH--
Q 014936          233 -STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP------DE--  302 (415)
Q Consensus       233 -~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------~~--  302 (415)
                       ...++++++||||.| +++|+|+||++...     .++++++.+........+++.+.|.++..++...      .+  
T Consensus       303 ~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~-----~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~  377 (498)
T 3ihj_A          303 SSNVELASFHSTSKGYMGECGYRGGYMEVIN-----LHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQF  377 (498)
T ss_dssp             HTTCCEEEEEESSSSTTCCSSSCCEEEEEES-----CCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHH
T ss_pred             cCceeEEEEeccccccccCcccceEEEEEec-----CCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHH
Confidence             234589999999999 78999999998421     0136888887765556778889999999888741      12  


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc-------cCCCCCHHHHHHHHHhhcCeEEEcC
Q 014936          303 -VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL-------LDDIIDDIDFCFKLAKEESVIILPG  374 (415)
Q Consensus       303 -~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~-------~~~~~~~~~~~~~ll~~~gi~v~~g  374 (415)
                       .+.++.+++++++++.+.+.|+++|++. +..|.+|+|+|++++.+.       ..+...+..++.++|+++||.+.||
T Consensus       378 ~~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG  456 (498)
T 3ihj_A          378 SREKESVLGNLAKKAKLTEDLFNQVPGIH-CNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPG  456 (498)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-ecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeC
Confidence             2345677889999999999999998998 458899999998764210       0022123333778888899999999


Q ss_pred             CCCCC---CCeEEEEeeCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          375 TAVGL---KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       375 ~~~~~---~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      +.|+.   .+++|++++.+++++++++++|+++++++.++.
T Consensus       457 ~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~~~~  497 (498)
T 3ihj_A          457 SGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEKY  497 (498)
T ss_dssp             GGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            99985   459999999899999999999999999887653

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=2.8e-48  Score=365.92  Aligned_cols=350  Identities=20%  Similarity=0.314  Sum_probs=302.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .+++++||+.|++.    +++++.+++++.+.+... ...|++ .+ .++|+.+++++++.+|..+++++|++|+|++++
T Consensus        21 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a   93 (377)
T 3fdb_A           21 YGQGVLPLWVAESD----FSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG   93 (377)
T ss_dssp             SCTTSEECCSSCCC----SCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred             cCCCeeeecccCCC----CCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence            37889999999854    678899999999988764 347888 77 899999999999888888899999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.++.++||+|+++.|+|+++...++..|.++..++.+++    +|+++++++++++++++++++|+||||.++|.
T Consensus        94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~  169 (377)
T 3fdb_A           94 LYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAP  169 (377)
T ss_dssp             HHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCH
T ss_pred             HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999998643    89999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCC-CCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++|+++|+||+|+.+.+++ ....++..+...++++++.|+||.++++|+|+||+++.+       +++
T Consensus       170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~  242 (377)
T 3fdb_A          170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSD  242 (377)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHH
Confidence            999999999999999999999999998877 555555554445678999999999999999999998754       257


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      ++.+..... .+.+++++.+.++.++|+.. ++++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~  320 (377)
T 3fdb_A          243 AEHWQQLSPVIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQATYLMWIDFRDTT  320 (377)
T ss_dssp             HHHHHHSCHHHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCE-ECCCSBCSEEEEECTTSC
T ss_pred             HHHHHHHHHhhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCeeEEEEEECcccC
Confidence            777776533 34678899999988888753 577899999999999999999998 88888 557888888899887521


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                           .+.+++..+++++||.+.||..|+.  ++++||+++.+++++++++++|++++++
T Consensus       321 -----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~  375 (377)
T 3fdb_A          321 -----IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSH  375 (377)
T ss_dssp             -----CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTT
T ss_pred             -----CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence                 1245677777778999999998875  6899999988999999999999988754

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=1.7e-47  Score=362.37  Aligned_cols=355  Identities=19%  Similarity=0.288  Sum_probs=304.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +++++||+.|++.    +++++.+.+++.+.+... ...|++.  ..++++++++++++.+|.++++++|++|+|+++++
T Consensus        26 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~   98 (391)
T 3dzz_A           26 KEKELPMWIAEMD----FKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI   98 (391)
T ss_dssp             CTTCEECCSSCCS----SCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred             CCCceeccccCCC----CCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence            6789999999854    778999999999998764 3467764  58999999999998888888899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc-CCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~  191 (415)
                      .+++.++.++||+|+++.|+|+++...++..|.+++.++++ .++.+.+|+++|+++++ +++++|++++|+||||.++|
T Consensus        99 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~  178 (391)
T 3dzz_A           99 SAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWS  178 (391)
T ss_dssp             HHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccC
Confidence            99999999999999999999999999999999999999885 34456689999999997 68999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      .+++++|+++|+++|+++|+||+|+++.+.+....++..+..  .++++++.|+||.++++|+|+||+++++       +
T Consensus       179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~-------~  251 (391)
T 3dzz_A          179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN-------P  251 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC-------H
Confidence            999999999999999999999999999988766666666553  4578999999999999999999999863       2


Q ss_pred             HHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecC
Q 014936          270 KVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLN  346 (415)
Q Consensus       270 ~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~  346 (415)
                      ++.+.+.....  ..++++++.+.++..+++. ...++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~  329 (391)
T 3dzz_A          252 DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLDSNASYLAWVDIS  329 (391)
T ss_dssp             HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCCBSSEEEEECG
T ss_pred             HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EeccCceEEEEEehh
Confidence            57777766532  2356788888888888865 3577899999999999999999998 88988 557888999999886


Q ss_pred             ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ...    .+..++...+++++||.+.||..|+.  ++++||+++.+++++++++++|+++++++
T Consensus       330 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~  389 (391)
T 3dzz_A          330 ALG----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNL  389 (391)
T ss_dssp             GGC----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTC
T ss_pred             hcC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence            421    25677878776678999999998876  48999999989999999999999988653

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=7.2e-48  Score=363.04  Aligned_cols=349  Identities=20%  Similarity=0.301  Sum_probs=293.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~  111 (415)
                      .+++++||+.|.+.    +++++.+++++.+.+.......|++..|..++|+++++++.+.+|..++++ +|++|+|+++
T Consensus        23 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~   98 (376)
T 2dou_A           23 RGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE   98 (376)
T ss_dssp             TTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred             cCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence            36789999999864    556899999999988654455788766889999999999988778777777 9999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      ++.+++.++.++||+|+++.|+|+.+...++..|.++..+++  ++++.+|++++++.++++++++++++|+||||.++|
T Consensus        99 a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~  176 (376)
T 2dou_A           99 GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVAD  176 (376)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCC
Confidence            999999999999999999999999999999999999999987  456678999999888777899999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      .+++++|+++|+++|+++|+||+|+.+.+++.....+...+..++++++.|+||.|+++|+|+||+++++        ++
T Consensus       177 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~  248 (376)
T 2dou_A          177 WGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--------EA  248 (376)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--------HH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--------HH
Confidence            9999999999999999999999999988765322222222334578999999999989999999999864        67


Q ss_pred             HHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+..... .+.+.+++.+.++.++|+.. ++++++.+++++++++.+.+.|+++  +. +..|.+|+|+|++++..  
T Consensus       249 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~--  322 (376)
T 2dou_A          249 LARLERVKGVIDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV--LS-LLPPRATMYLWGRLPEG--  322 (376)
T ss_dssp             HHHHHHHHHHHCCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCCBSSEEEEECCTT--
T ss_pred             HHHHHHHHHhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCCeeEEEEEECCCC--
Confidence            777776533 34567889999999999764 6788999999999999999999887  66 44677889999988641  


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                         .+..++...++++ ||.+.||..|+.  ++++||+++.+++++++++++|++++
T Consensus       323 ---~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          323 ---VDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL  375 (376)
T ss_dssp             ---CCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred             ---CCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence               2456777777655 999999988864  68999999888999999999998764

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=3.1e-47  Score=364.97  Aligned_cols=359  Identities=23%  Similarity=0.359  Sum_probs=300.1

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCT  110 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~  110 (415)
                      +.++|+|+.|.++    +++++.+.+++.+.+...  ....|++..|..++|+++++++++.+|.+++++ +|++|+|++
T Consensus        36 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~  111 (429)
T 1yiz_A           36 QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAY  111 (429)
T ss_dssp             HHCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHH
T ss_pred             cCCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChH
Confidence            3568999999864    567899999999988752  235788878899999999999988778778888 999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC--------CCCCChhHHHhhcCCCceEEEecCC
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIINP  182 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~v~i~~p  182 (415)
                      +++..++++++++||+|+++.|+|+.+...++..|.++..++.++++        ++.+|++.|+++++++++++++++|
T Consensus       112 ~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p  191 (429)
T 1yiz_A          112 EALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTP  191 (429)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESS
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCC
Confidence            99999999999999999999999999999999999999999986543        5678999999999888999999999


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      +||||.++|.+++++|+++|+++|+++|+||+|.++.+++.+..++..+. ..++++++.|+||.|+++|+|+||+++++
T Consensus       192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~  271 (429)
T 1yiz_A          192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE  271 (429)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCH
Confidence            99999999999999999999999999999999999988776555555553 34568999999999998999999999865


Q ss_pred             CCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCC-----Cc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          262 PCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQ-----PD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~-----~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                              ++++.+.... ..+++.+++.|.++.++|+.     .. ++++++.+++++++++.+.+.|+++ ++. +..
T Consensus       272 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~  341 (429)
T 1yiz_A          272 --------ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMN-PTV  341 (429)
T ss_dssp             --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEE
T ss_pred             --------HHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccC
Confidence                    6777776653 33567788899888888875     32 4678899999999999999999987 777 446


Q ss_pred             CCCceEEEEecCcccc-------CCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------CCeEEEEeeCChhhHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLL-------DDIIDDIDFCFKLAKEESVIILPGTAVGL-------KNWLRVTFAVDPYSLEECLDR  400 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~-------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~~~~~~~~l~~~l~~  400 (415)
                      |.+|+|+|++++....       .+..+..++...+++++||.+.||..|+.       .+++||+++.+++++++++++
T Consensus       342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~  421 (429)
T 1yiz_A          342 PQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEI  421 (429)
T ss_dssp             CSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHH
T ss_pred             CCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHH
Confidence            7789999999864210       00013456777777678999999987753       579999998899999999999


Q ss_pred             HHHHHH
Q 014936          401 IKSFYQ  406 (415)
Q Consensus       401 l~~~~~  406 (415)
                      |+++++
T Consensus       422 l~~~l~  427 (429)
T 1yiz_A          422 LRKWKG  427 (429)
T ss_dssp             HHHHSC
T ss_pred             HHHhcc
Confidence            988753

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=7.3e-47  Score=355.38  Aligned_cols=364  Identities=23%  Similarity=0.415  Sum_probs=301.0

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l   82 (415)
                      +|++.....++  .+.++.....+..   ..++++++|+.|.++    +++++.+++++.+.+... ...|++..|..++
T Consensus         2 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l   71 (370)
T 2z61_A            2 LSKRLLNFESF--EVMDILALAQKLE---SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILEL   71 (370)
T ss_dssp             CCHHHHHCCCC--TTHHHHHHHHHHH---HTTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHH
T ss_pred             hhhhhhhcccc--HHHHHHHHHHHHH---hcCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHH
Confidence            34555555665  4555555433322   236789999999874    455789999999988754 3578887899999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  162 (415)
                      |+++++++++.+|..+++++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.++..++        +|
T Consensus        72 ~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d  143 (370)
T 2z61_A           72 REKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FT  143 (370)
T ss_dssp             HHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SS
T ss_pred             HHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CC
Confidence            9999999998888888999999999999999999999999999999999999999999999999998876        58


Q ss_pred             hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEc
Q 014936          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLG  241 (415)
Q Consensus       163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~  241 (415)
                      +++|++.++++++++++++|+||||.+++.+    |+++|+++|+++|+||+|+.+.+++. ..++..+. ..++++++.
T Consensus       144 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~  218 (370)
T 2z61_A          144 VESLEEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILIN  218 (370)
T ss_dssp             HHHHHHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEE
T ss_pred             HHHHHHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEe
Confidence            9999999988889999999999999999977    88999999999999999999887653 33444442 345789999


Q ss_pred             cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY  320 (415)
Q Consensus       242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  320 (415)
                      |+||.++++|+|+||+++++        ++++.++.... .+++++++.+.++.++|+...+.++++.+++++++++.+.
T Consensus       219 s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  290 (370)
T 2z61_A          219 GFSKLYAMTGWRIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVL  290 (370)
T ss_dssp             ESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cChhccCCccceEEEEEECH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence            99999988999999999865        67777766533 3457888999999888864125678889999999999999


Q ss_pred             HHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHH
Q 014936          321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECL  398 (415)
Q Consensus       321 ~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l  398 (415)
                      +.|+++ ++. +..|.+|+++|++++.       +..++...+++++||.+.||..|+.  ++++||+++.+++++++++
T Consensus       291 ~~L~~~-g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~  361 (370)
T 2z61_A          291 KYVKDF-GWE-VNNPIGAYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGL  361 (370)
T ss_dssp             HHHHHT-TCB-CCCCCBTTEECCBCSS-------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHH
T ss_pred             HHHHHc-CCe-ecCCCcceEEEEecCC-------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHH
Confidence            999988 777 4467889999988753       4667777776578999999988874  6899999998999999999


Q ss_pred             HHHHHHHH
Q 014936          399 DRIKSFYQ  406 (415)
Q Consensus       399 ~~l~~~~~  406 (415)
                      ++|+++++
T Consensus       362 ~~l~~~l~  369 (370)
T 2z61_A          362 ERIKEFLN  369 (370)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            99998764

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=1.8e-47  Score=360.34  Aligned_cols=342  Identities=22%  Similarity=0.302  Sum_probs=288.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      ++ +++||+.|++.    +++++.+++++.+.+.  ....|++..|..++|+++++++.+.+|..+++++|++|+|++++
T Consensus        22 ~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~a   94 (376)
T 3ezs_A           22 KK-RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREV   94 (376)
T ss_dssp             SS-CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHH
T ss_pred             cC-CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHH
Confidence            45 89999999964    6678999999988773  34589988899999999999998888877789999999999999


Q ss_pred             HHHHHHHhcCC--CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936          113 IDVAMALLSRP--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY  190 (415)
Q Consensus       113 l~~~~~~l~~~--gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  190 (415)
                      +..++.++.++  ||+|+++.|+|+.+...++..|.++..++.++++++  ++ ++++.+.++++++++++|+||||.++
T Consensus        95 l~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~-~l~~~~~~~~~~v~~~~p~nptG~~~  171 (376)
T 3ezs_A           95 LFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDF--TP-SLNEKELQEVDLVILNSPNNPTGRTL  171 (376)
T ss_dssp             HHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTS--CC-CCCHHHHHHCSEEEECSSCTTTCCCC
T ss_pred             HHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCc--ch-hHHhhhccCCCEEEEcCCCCCcCCCC
Confidence            99999999999  999999999999999999999999999998655443  33 55555656788999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-----CCCCeEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-----STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  265 (415)
                      +.+++++|+++|+++|+++|+||+|..+.+++.....+...+     ..++++++.|+||.|+++|+|+||+++++    
T Consensus       172 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~----  247 (376)
T 3ezs_A          172 SLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDS----  247 (376)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECH----
T ss_pred             CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCH----
Confidence            999999999999999999999999999888763322222211     45678999999999989999999999854    


Q ss_pred             CChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEe
Q 014936          266 FRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK  344 (415)
Q Consensus       266 ~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~  344 (415)
                          ++++.+..... .+++.+++.+.++.++|+.  .+++++.+++++++++.+.+.|+   ++.   .|.+|+|+|++
T Consensus       248 ----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~---~~~---~~~~~~~~~~~  315 (376)
T 3ezs_A          248 ----RLLEKYKAFRAYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK---NTL---IYPYSFYVYLP  315 (376)
T ss_dssp             ----HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST---TCC---CCSBSSEEEEE
T ss_pred             ----HHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc---CCC---CCCcceEEEEE
Confidence                68888776643 3567889999999999986  36788999999999999999997   343   67889999998


Q ss_pred             cCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----CCCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          345 LNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----LKNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       345 l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ++        +..++...+++++||.+.||..|+    .++++||+++.+++++++++++|+++++++
T Consensus       316 ~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~  375 (376)
T 3ezs_A          316 VQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENH  375 (376)
T ss_dssp             CS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHCC-
T ss_pred             CC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence            86        366777887765899999999887    368999999889999999999999987643

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=6.1e-47  Score=359.59  Aligned_cols=356  Identities=17%  Similarity=0.267  Sum_probs=298.5

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      +++++|+.|++.    +++++.+.+++.+.+... ...|++.  ..++|+++++++++.+|..+++++|++|+|+++++.
T Consensus        31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~  103 (399)
T 1c7n_A           31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF  103 (399)
T ss_dssp             TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred             CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence            578999999854    667899999999988643 3478764  899999999999887777788899999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC-CCCCChhHHHhhcC-CCceEEEecCCCCccccCCCH
Q 014936          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +++.++.++||+|+++.|+|+++...++..|.++..++.++++ +|.+|+++|+++++ ++++++++++|+||||.++|.
T Consensus       104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~  183 (399)
T 1c7n_A          104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK  183 (399)
T ss_dssp             HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred             HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence            9999999999999999999999999999999999998875322 45689999999987 678999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      +++++|+++|+++|+++|+||+|+.+.+++....++..+..  .++++++.|+||.++++|+|+||+++++       ++
T Consensus       184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~  256 (399)
T 1c7n_A          184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------PD  256 (399)
T ss_dssp             HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------HH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC-------HH
Confidence            99999999999999999999999999887765555655543  4578999999999998999999999864       24


Q ss_pred             HHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCc
Q 014936          271 VVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNL  347 (415)
Q Consensus       271 ~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~  347 (415)
                      +++.+.......  .+++++.+.++.++|+.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus       257 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~  334 (399)
T 1c7n_A          257 IRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDFRA  334 (399)
T ss_dssp             HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEECGG
T ss_pred             HHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCe-EecCCceEEEEEEccc
Confidence            777776653322  357888999888888643 578889999999999999999998 88888 4477888888998864


Q ss_pred             cccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--CCCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVG--LKNWLRVTFAVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      ..    .+..++...+++++||.+.||..|+  .++++||+++.+++++++++++|+++++++.+
T Consensus       335 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~  395 (399)
T 1c7n_A          335 LK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKN  395 (399)
T ss_dssp             GC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC-
T ss_pred             CC----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHh
Confidence            21    1466777777657899999998886  36899999988889999999999999887543

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=1.9e-46  Score=355.24  Aligned_cols=351  Identities=20%  Similarity=0.346  Sum_probs=300.5

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.++++|+.|++.    +++++.+.+++.+.+.... ..|++  +..++++++++++.+.+|..+++++|++|+|+++++
T Consensus        31 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~  103 (391)
T 4dq6_A           31 TNDLLPMWVADMD----FKAAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAI  103 (391)
T ss_dssp             CSCSEECCSSSCS----SCCCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCceeccccCCC----CCCCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHH
Confidence            5789999999854    6788999999999887533 46665  568999999999998888778899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc--CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      .+++.++.++||+|+++.|+|+++...++..|.+++.++++  .++++.+|++++++++++ ++++++++|+||||.++|
T Consensus       104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~  182 (391)
T 4dq6_A          104 SLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWT  182 (391)
T ss_dssp             HHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcC
Confidence            99999999999999999999999999999999999999987  345577899999999988 999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      .+++++|+++|+++|+++|+||+|+++.+++....++..+..  .++++++.|+||.++++|+|+||+++++       +
T Consensus       183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~  255 (391)
T 4dq6_A          183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD-------E  255 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC-------H
Confidence            999999999999999999999999999988776666666654  3678999999999999999999999864       2


Q ss_pred             HHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecC
Q 014936          270 KVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLN  346 (415)
Q Consensus       270 ~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~  346 (415)
                      ++.+.+.....  ...+++++.+.++..+++. .++++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~  333 (391)
T 4dq6_A          256 KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLK-VRKPEGTYLLWVDFS  333 (391)
T ss_dssp             HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCSBSSEEEEECG
T ss_pred             HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecCCCccEEEEEEhh
Confidence            46777766532  2346788888888888875 3577889999999999999999987 78888 547888899999886


Q ss_pred             ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                      ...    .+..++...+++++||.+.||..|+.  .+++|++++.+++++++++++|++++
T Consensus       334 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          334 ALG----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI  390 (391)
T ss_dssp             GGC----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             hcC----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence            421    25677777776656999999998876  48999999999999999999998875

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=6.4e-48  Score=369.06  Aligned_cols=376  Identities=21%  Similarity=0.278  Sum_probs=296.0

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHH---------HHHHhcCCCCCC
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAV---------AEALLSEKFNGY   73 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~---------~~~~~~~~~~~y   73 (415)
                      +|++.....++  .+..+.....+      .++++++|+.|.|+... ++ ...+..++         .+...  ....|
T Consensus         7 ~s~~~~~~~~~--~~~~~~~~~~~------~~~~~i~l~~G~p~~~~-~p-~~~~~~~~~~~~~~~~~~~~~~--~~~~Y   74 (425)
T 2r2n_A            7 ITAASAARNPS--PIRTMTDILSR------GPKSMISLAGGLPNPNM-FP-FKTAVITVENGKTIQFGEEMMK--RALQY   74 (425)
T ss_dssp             SCHHHHTCCCC--SGGGHHHHHHH------SCTTCEECCCCCCCGGG-CS-EEEEEEEETTSCCEEECHHHHH--HHTSC
T ss_pred             HHHHHhcCCCc--hHHHHHHHhhc------CCCCeEEcCCcCCCchh-CC-HHHHHHHHhhcccccccccchh--hhcCC
Confidence            45666666776  44444442221      13568999999987432 22 11111000         01111  12379


Q ss_pred             CCCCCcHHHHHHHHHHHhhhCCCCCC-------CCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCC
Q 014936           74 APTAGLPLTRRAIAEYLSRDLPYKLT-------PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI  146 (415)
Q Consensus        74 ~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~  146 (415)
                      +++.|++++|+++++++++.+|....       +++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.
T Consensus        75 ~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~  154 (425)
T 2r2n_A           75 SPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGC  154 (425)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTC
T ss_pred             CCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCC
Confidence            88899999999999999887786653       37999999999999999999999999999999999999999999999


Q ss_pred             eEEEeeccCCCCCCCChhHHHhhcC------------CCceEEEe-cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936          147 EVRHFDLLPDKGWEVDLDDIESLAD------------QNTVALVI-INPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (415)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  213 (415)
                      +++.++++.   .++|+++|++.++            ++++++++ ++||||||.++|.+++++|+++|+++|+++|+||
T Consensus       155 ~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De  231 (425)
T 2r2n_A          155 NIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDD  231 (425)
T ss_dssp             EEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             EEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEC
Confidence            999998753   2489999999886            35677765 6899999999999999999999999999999999


Q ss_pred             ccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHH
Q 014936          214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAA  292 (415)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a  292 (415)
                      +|+++.+++....++..++..+++++++||||+|+ +|+|+||+++++        ++++.+.... ..+++++++.|.+
T Consensus       232 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a  302 (425)
T 2r2n_A          232 PYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------PLIERVILHIQVSTLHPSTFNQLM  302 (425)
T ss_dssp             TTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------HHHHHHHHHHHTTTCSSCHHHHHH
T ss_pred             CcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------HHHHHHHHHHHHhcCCCCHHHHHH
Confidence            99999888766666777766678999999999987 999999999975        6778777653 3346788999999


Q ss_pred             HHHhhCCCc----HHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936          293 VPSILQQPD----EVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE  367 (415)
Q Consensus       293 ~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~  367 (415)
                      +.++|+...    .+++++.+++++++++.+.+.|++ +|++..+..|.+|+|+|++++..     .+..+++...+.++
T Consensus       303 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-----~~~~~~~~~~l~~~  377 (425)
T 2r2n_A          303 ISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-----NDVKELIEEKAVKM  377 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-----SCCHHHHHTHHHHT
T ss_pred             HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-----CCHHHHHHHHHHHC
Confidence            999987521    366788889999999999999987 67763244789999999998642     13455445556788


Q ss_pred             CeEEEcCCCCCC-----CCeEEEEee-CChhhHHHHHHHHHHHHHH
Q 014936          368 SVIILPGTAVGL-----KNWLRVTFA-VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       368 gi~v~~g~~~~~-----~~~iRi~~~-~~~~~l~~~l~~l~~~~~~  407 (415)
                      ||.+.||..|+.     .+++||+++ .+++++++++++|++++++
T Consensus       378 gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~  423 (425)
T 2r2n_A          378 GVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE  423 (425)
T ss_dssp             TEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence            999999998864     479999997 7899999999999998865

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=4.2e-47  Score=366.16  Aligned_cols=356  Identities=18%  Similarity=0.263  Sum_probs=291.9

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .++++|+|+.|+++    +++++.+++++.+.+..    .....|++..|..+||+++++++.  +|+++++++|++|+|
T Consensus        67 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G  140 (449)
T 3qgu_A           67 PDAKIISLGIGDTT----EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDG  140 (449)
T ss_dssp             TTCCCEECSSCCCC----CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESC
T ss_pred             CCCCEEEeeCCCCC----CCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccC
Confidence            36789999999864    67789999999998873    344589888899999999999997  777788999999999


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCe----------EEEeeccCCCCCCCChhHHHhhcCCCceEEE
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE----------VRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  178 (415)
                      +++++..+ ..++++||+|+++.|+|+++...++..|.+          +..+++++++++..+++++     +++++|+
T Consensus       141 ~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~  214 (449)
T 3qgu_A          141 SKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIF  214 (449)
T ss_dssp             HHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEE
T ss_pred             HHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CCCCEEE
Confidence            99999998 788899999999999999999999999998          9999987655555555432     5788999


Q ss_pred             ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEE
Q 014936          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      +++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++....++..++. .++++++.|+||.|+++|+|+||+
T Consensus       215 l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~  294 (449)
T 3qgu_A          215 FCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWT  294 (449)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEE
T ss_pred             EeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEE
Confidence            9999999999999999999999999999999999999999988766666665543 456899999999999999999999


Q ss_pred             EeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC
Q 014936          258 VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE  336 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  336 (415)
                      +++++........+...+.... ..+.+++++.|.++..++.....+++++.+++++++++++.+.|+++ ++. +..|.
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~  372 (449)
T 3qgu_A          295 VVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFS-VYGGD  372 (449)
T ss_dssp             ECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EEESS
T ss_pred             ecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-eeCCC
Confidence            9976321000000122333332 22357788999999999875334678899999999999999999988 777 44778


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +++|+|+.++.      .+..+++..+++++||.+.||..|+.  +++|||++..+++++++++++|++++++.
T Consensus       373 ~~~~~~~~~~~------~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~  440 (449)
T 3qgu_A          373 DAPYIWVGFPG------KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSRENILEAVRRFKEAYGKR  440 (449)
T ss_dssp             SSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHC--
T ss_pred             CeeEEEEECCC------CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence            89999998861      25778888888878999999998875  68999999889999999999999988653

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=1.2e-46  Score=355.27  Aligned_cols=368  Identities=13%  Similarity=0.095  Sum_probs=284.4

Q ss_pred             cCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHH-hcCCCCCCCCCCCcHHH
Q 014936            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEAL-LSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~-~~~~~~~y~~~~g~~~l   82 (415)
                      .+....+++  ++..+.....+..     ..++|||+.|.+ +..+.+++++.++++.. .+ ..+....|++..|.++|
T Consensus         6 ~~~~~~~~~--~i~~~~~~~~~~~-----~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~l   77 (405)
T 3k7y_A            6 SSLENIEVD--NILKTAREFKEDT-----CEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDF   77 (405)
T ss_dssp             GGCCCCCCC--HHHHHHHHHTTSS-----CSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHH
T ss_pred             hcCCCCCCC--hHHHHHHHHhcCC-----CcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHH
Confidence            344555666  6666666555443     467899999973 33334567889999887 44 33445689999999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCc--EEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936           83 RRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~--i~i~~g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  158 (415)
                      |+++++|+.+..+..+++++  +++|+|+++++.+++.++.+  + |+|++++|+|+.|...++..|++++.++...+++
T Consensus        78 r~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~  156 (405)
T 3k7y_A           78 STLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNL  156 (405)
T ss_dssp             HHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTT
T ss_pred             HHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEecccccc
Confidence            99999999765555566664  59999999999999999987  8 9999999999999999999999999998754456


Q ss_pred             CCCChhHHHhhcCC--CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC--ccccccc-C
Q 014936          159 WEVDLDDIESLADQ--NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP--FVPMGVF-G  232 (415)
Q Consensus       159 ~~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~  232 (415)
                      +++|++.+++.+++  .+++++++.| |||||.+++.+++++|+++|++||+++|+||+|.++.+++..  ..++..+ .
T Consensus       157 ~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~  236 (405)
T 3k7y_A          157 IDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEE  236 (405)
T ss_dssp             TEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHT
T ss_pred             CCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHh
Confidence            88999999998863  4567777665 899999999999999999999999999999999998876421  1222222 2


Q ss_pred             CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH----hh-ccccCCchhHHHHHHHHhhCCCc-----H
Q 014936          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----KY-FDILGDPATFIQAAVPSILQQPD-----E  302 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~a~~~~l~~~~-----~  302 (415)
                      ..+++|+++||||.|+++|+|+||+++...     ++++++.+.    .. .....+++.++|.++..+|.+..     .
T Consensus       237 ~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~  311 (405)
T 3k7y_A          237 KNIAFSVCQSFSKNMSLYGERAGALHIVCK-----NQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWI  311 (405)
T ss_dssp             TTCCEEEEEECTTTSCCTTTTEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHH
T ss_pred             cCCcEEEEeeCCccCCCccccceEEEEEeC-----CHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHH
Confidence            346899999999999999999999975321     124554443    22 12234567788989888887631     2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh----cCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC
Q 014936          303 VFFKKTLNLLKQSVDICYNKIK----EIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT  375 (415)
Q Consensus       303 ~~~~~~~~~~~~~~~~l~~~l~----~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~  375 (415)
                      +++++.+++++++|+.+.+.|+    +++   ++. +..|++|+|+|++++.          +++..+ +++||.+.||.
T Consensus       312 ~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~-~~~p~gg~f~~~~l~~----------~~~~~L-~~~gV~v~p~~  379 (405)
T 3k7y_A          312 KELSQLSQRITNNRILFFNKLETYQKKYNLNYDWN-VYKKQRGLFSFVPLLA----------KIAEHL-KTHHIYIINNG  379 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGG-GGSSCCSSEEECGGGG----------GGTTTT-TTTTEECCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCc-cccCCceEEEecCCCH----------HHHHHH-HHCCEeecCCC
Confidence            4456677889999999999999    762   156 4489999999987752          334556 88999999963


Q ss_pred             CCCCCCeEEEEee-CChhhHHHHHHHHHHHHH
Q 014936          376 AVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       376 ~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~  406 (415)
                              |||++ .++++++.++++|+++++
T Consensus       380 --------Ris~a~~~~~~i~~~~~~i~~~~~  403 (405)
T 3k7y_A          380 --------RINVSGITKNNVDYIADKICLSLS  403 (405)
T ss_dssp             --------EEEGGGCCTTHHHHHHHHHHHHHH
T ss_pred             --------eEEEeccCHHHHHHHHHHHHHHHh
Confidence                    99995 689999999999999875

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=4e-46  Score=354.93  Aligned_cols=376  Identities=23%  Similarity=0.385  Sum_probs=306.3

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l   82 (415)
                      ++.+....+++  .+..+...+.+..   ..++++++|+.|.+.    +++++.+++++ +.+... ...|++..|..++
T Consensus        16 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l   84 (409)
T 2gb3_A           16 FSDRVLLTEES--PIRKLVPFAEMAK---KRGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWEL   84 (409)
T ss_dssp             CCHHHHSCCCC--TTGGGHHHHHHHH---HTTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHH
T ss_pred             HHHHhhcCCcc--HHHHHHHHHHHHH---hcCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHH
Confidence            45555566666  3333333322222   236789999999864    55678899999 887653 3578888889999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  162 (415)
                      |+++++++++.+|.+++++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.++.++++++.+ 
T Consensus        85 ~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-  163 (409)
T 2gb3_A           85 REAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-  163 (409)
T ss_dssp             HHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-
Confidence            9999999998888888889999999999999999999999999999999999999999999999999999865345555 


Q ss_pred             hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEc
Q 014936          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLG  241 (415)
Q Consensus       163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~  241 (415)
                      +++|+++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++. ..++  +. ..+++++++
T Consensus       164 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~--~~~~~~~~i~~~  240 (409)
T 2gb3_A          164 PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA--LSIESDKVVVID  240 (409)
T ss_dssp             CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG--GGSCCTTEEEEE
T ss_pred             HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc--cccCCCCEEEEe
Confidence            8999999988899999999999999999999999999999999999999999999887653 2222  21 134679999


Q ss_pred             cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY  320 (415)
Q Consensus       242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  320 (415)
                      |+||.++++|+|+||+++++       +++++.+..... .+ +++++.+.++.++|+. ...++++.+++++++++.+.
T Consensus       241 s~sK~~g~~G~r~G~~~~~~-------~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~  311 (409)
T 2gb3_A          241 SVSKKFSACGARVGCLITRN-------EELISHAMKLAQGRL-APPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVL  311 (409)
T ss_dssp             ESTTTTTCGGGCCEEEECSC-------HHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhccCCccceEEEEEECc-------HHHHHHHHHHHhccC-CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHH
Confidence            99999988999999999864       146677665532 23 7788999999999975 36778899999999999999


Q ss_pred             HHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhh-----cCeEEEcCCCCCC-----CCeEEEEeeCC
Q 014936          321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE-----ESVIILPGTAVGL-----KNWLRVTFAVD  390 (415)
Q Consensus       321 ~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~iRi~~~~~  390 (415)
                      +.|+++ ++..+..|.+|+++|++++.      .+..++...++++     +||.+.||..|+.     ++++||+++.+
T Consensus       312 ~~L~~~-g~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~  384 (409)
T 2gb3_A          312 KKLEEH-GLKRFTKPSGAFYITAELPV------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLE  384 (409)
T ss_dssp             HHHHHT-TCCCBCCCSBSSEEEEECSS------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSC
T ss_pred             HHHHHc-CceeeeCCCeeEEEEEEeCC------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCC
Confidence            999988 77731478889999988861      2567777777665     5999999988753     57999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       391 ~~~l~~~l~~l~~~~~~~~  409 (415)
                      ++++++++++|+++++++.
T Consensus       385 ~e~i~~~~~~l~~~l~~~~  403 (409)
T 2gb3_A          385 KDLLSRAIDVLMEGLKMFC  403 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            9999999999999998764

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=4.2e-46  Score=354.76  Aligned_cols=381  Identities=23%  Similarity=0.349  Sum_probs=308.0

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP   80 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~   80 (415)
                      +|++.....++  .+..+.....+..   ..|++++||+.|.|+..  ..+++.+.+++.+.+...  ... |+++.|..
T Consensus         7 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~idl~~g~~~~~--~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~   78 (407)
T 2zc0_A            7 LAGRANWIKGS--ALADVMKKASELQ---KKGVKLISLAAGDPDPE--LIPRAVLGEIAKEVLEKEPKSVM-YTPANGIP   78 (407)
T ss_dssp             SCGGGGGCCCC--HHHHHHHHHHHHH---HSSCCCEECCSCCCCTT--TSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCH
T ss_pred             hhhhhccCCch--HHHHHHHhhhccc---CCCCceEeCCCCCCCch--hCCHHHHHHHHHHHHhhcccccc-CCCCCCCH
Confidence            56666666666  4555554322111   12557899999987632  346788999999888653  234 88878999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      ++|+++++++.+.+|..+++++|++|+|+++++.+++.++.++||+|+++.|+|+++...++..|.++..++.+++   +
T Consensus        79 ~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---~  155 (407)
T 2zc0_A           79 ELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---G  155 (407)
T ss_dssp             HHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---E
T ss_pred             HHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---C
Confidence            9999999999887787788899999999999999999999999999999999999999999999999999987542   3


Q ss_pred             CChhHHHhhcC----C--CceEE-EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          161 VDLDDIESLAD----Q--NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       161 ~~~~~l~~~~~----~--~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                      +|+++|+++++    +  ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++.
T Consensus       156 ~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  235 (407)
T 2zc0_A          156 MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDN  235 (407)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCS
T ss_pred             CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCC
Confidence            89999999887    5  67776 57899999999999999999999999999999999999998887665555666655


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc-H-HHHHHHHH
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD-E-VFFKKTLN  310 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~~  310 (415)
                      .+++++++|+||.++ +|+|+||+++++        ++++.+..... .+.+++++.+.++..+|+... + .++++.++
T Consensus       236 ~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  306 (407)
T 2zc0_A          236 EGRVIVAGTLSKVLG-TGFRIGWIIAEG--------EILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALL  306 (407)
T ss_dssp             SCCEEEEEESTTTTC-TTSCCEEEECCH--------HHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHH
T ss_pred             CCCEEEEcccccccC-CCcceEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence            567899999999988 999999999864        67777766532 335568889999999997642 3 56778888


Q ss_pred             HHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEE
Q 014936          311 LLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRV  385 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi  385 (415)
                      +++++++.+.+.|++ +|++. +..|.+|+|+|++++..     .+..++...+++++||.+.||..|..    .+++||
T Consensus       307 ~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRi  380 (407)
T 2zc0_A          307 GYKEKRDIMLKALENHLPNAE-FTKPIAGMFVMFFLPEG-----ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRL  380 (407)
T ss_dssp             HHHHHHHHHHHHHHHHCTTSC-BCCCSBSSEEEEECSTT-----CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCCE-EecCCCcEEEEEEcCCC-----CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEE
Confidence            999999999999987 57777 44678899999998641     24667777776656999999988753    579999


Q ss_pred             EeeC-ChhhHHHHHHHHHHHHHHHH
Q 014936          386 TFAV-DPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       386 ~~~~-~~~~l~~~l~~l~~~~~~~~  409 (415)
                      +++. +++++++++++|+++++++.
T Consensus       381 s~~~~~~~~i~~~~~~l~~~l~~~~  405 (407)
T 2zc0_A          381 NFSRPSKEEIPIGIKKLAKLYKEKF  405 (407)
T ss_dssp             ECSSSCTTHHHHHHHHHHHHHHHHC
T ss_pred             EeCCCCHHHHHHHHHHHHHHHHHHh
Confidence            9975 78999999999999987654

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=2.9e-46  Score=353.79  Aligned_cols=353  Identities=19%  Similarity=0.282  Sum_probs=293.0

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH-HHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL-TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~-lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ++++||+.|++.    +++++.+.+++.+.+... ...|++.  ..+ +|+++++++++.+|..+++++|++|+|+++++
T Consensus        28 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al  100 (390)
T 1d2f_A           28 ADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV  100 (390)
T ss_dssp             --CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred             CCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence            478999999864    667899999999988653 3478774  678 99999999998888778899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC-CCCCChhHHHhhcCC-CceEEEecCCCCccccCCC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~  191 (415)
                      .+++.++.++||+|+++.|+|+++...++..|.+++.++.++++ +|.+|+++|++++++ +++++++++|+||||.++|
T Consensus       101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~  180 (390)
T 1d2f_A          101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT  180 (390)
T ss_dssp             HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence            99999999999999999999999999999999999999886543 466899999999876 7889999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      .+++++|+++|+++|+++|+||+|+.+.+++....++..+.....-. +.|+||.|+++|+|+||+++++       +++
T Consensus       181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~-------~~~  252 (390)
T 1d2f_A          181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN-------SSS  252 (390)
T ss_dssp             TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS-------HHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC-------HHH
Confidence            99999999999999999999999999988766555555554321013 8899999988999999999864       257


Q ss_pred             HHHHHhhcc--cc-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCc
Q 014936          272 VERMKKYFD--IL-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNL  347 (415)
Q Consensus       272 ~~~~~~~~~--~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~  347 (415)
                      .+.+.....  .. ++++++.+.++.++++.. ++++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~  330 (390)
T 1d2f_A          253 RDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRP  330 (390)
T ss_dssp             HHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGG
T ss_pred             HHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEccc
Confidence            777765532  23 367888888888888642 567889999999999999999998 88887 4477788888998864


Q ss_pred             cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ..    .+..++...+++++||.+.||..|+.  ++++||+++.+++++++++++|+++++++
T Consensus       331 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~  389 (390)
T 1d2f_A          331 LN----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAV  389 (390)
T ss_dssp             GC----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred             cC----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence            21    14667777776578999999998863  68999999888899999999999998764

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=1.3e-46  Score=361.17  Aligned_cols=375  Identities=19%  Similarity=0.305  Sum_probs=303.0

Q ss_pred             HHHHh-hhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-----------CCCCCCCCCcHHHHHHHH
Q 014936           20 MLSLL-MQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-----------FNGYAPTAGLPLTRRAIA   87 (415)
Q Consensus        20 ~~~~~-~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----------~~~y~~~~g~~~lr~~ia   87 (415)
                      .+..+ .+.++++.++..+++|+.+..     ...++.+.+++.+......           ...|++..|.++||++++
T Consensus        22 ~~~~~~~~~y~~~~~p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la   96 (435)
T 3piu_A           22 GWQEYEKNPYHEVHNTNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMV   96 (435)
T ss_dssp             HHHHHHHSBCBTTTBTTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHH
T ss_pred             HHHHhhcCCCCcccCCCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHH
Confidence            44444 455676677778999999763     3347888888877544221           146998899999999999


Q ss_pred             HHHhhhCC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hCCCeEEEeeccCCCCCCCChh
Q 014936           88 EYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLD  164 (415)
Q Consensus        88 ~~~~~~~~--~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~  164 (415)
                      +++++.++  ..+++++|++|+|+++++..++.++.++||.|+++.|+|.++...+. ..|.++..+++++++++.+|++
T Consensus        97 ~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~  176 (435)
T 3piu_A           97 DFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITET  176 (435)
T ss_dssp             HHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHH
T ss_pred             HHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHH
Confidence            99986544  45778999999999999999999999999999999999999988887 7899999999877667889999


Q ss_pred             HHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-----
Q 014936          165 DIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-----  233 (415)
Q Consensus       165 ~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-----  233 (415)
                      +|++++++      ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++....++..+..     
T Consensus       177 ~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d  256 (435)
T 3piu_A          177 ALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCD  256 (435)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC----
T ss_pred             HHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccc
Confidence            99998865      7889999999999999999999999999999999999999999998888766555544332     


Q ss_pred             -----CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHHHH
Q 014936          234 -----TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVFFK  306 (415)
Q Consensus       234 -----~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~  306 (415)
                           .+++++++|+||.|+++|+|+||+++++       +.+.+.++.... ....+++.+.++..+++...  +++++
T Consensus       257 ~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~  328 (435)
T 3piu_A          257 ENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSND-------DMVVAAATKMSS-FGLVSSQTQHLLSAMLSDKKLTKNYIA  328 (435)
T ss_dssp             ---CGGGGEEEEEESSSSSCCGGGCEEEEEESC-------HHHHHHHHHHGG-GSCCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             cccCCCCCEEEEEeeecccCCCceeEEEEEeCC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhcChHHHHHHHH
Confidence                 4578999999999999999999999854       246666665543 35677888999888887632  34667


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC-CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeE
Q 014936          307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD-IIDDIDFCFKLAKEESVIILPGTAVGL--KNWL  383 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~i  383 (415)
                      +.+++++++++.+.+.|+++ ++. +..+.+|+|+|+.++...... ..+..+++..+++++||.+.||..|+.  ++++
T Consensus       329 ~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~i  406 (435)
T 3piu_A          329 ENHKRLKQRQKKLVSGLQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWF  406 (435)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEE
T ss_pred             HHHHHHHHHHHHHHHHHHhc-CCc-ccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEE
Confidence            88899999999999999988 787 447788899999987521100 002456777777777999999998864  6899


Q ss_pred             EEEeeC-ChhhHHHHHHHHHHHHHHHH
Q 014936          384 RVTFAV-DPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       384 Ri~~~~-~~~~l~~~l~~l~~~~~~~~  409 (415)
                      ||+++. +++++++++++|++++++++
T Consensus       407 Ri~~~~~~~e~i~~~l~~l~~~l~~~~  433 (435)
T 3piu_A          407 RVCFANLPERTLDLAMQRLKAFVGEYY  433 (435)
T ss_dssp             EEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence            999976 89999999999999987653

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=1.8e-46  Score=354.16  Aligned_cols=366  Identities=28%  Similarity=0.404  Sum_probs=294.3

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |.++++.....++  .+..+....        ..++++||+.|.|+    +++++.+.+++.+.+..  ...|++..+..
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~--------~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~   64 (381)
T 1v2d_A            1 MRLHPRTEAAKES--IFPRMSGLA--------QRLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLP   64 (381)
T ss_dssp             CCCCGGGGGC-----CHHHHHHHH--------HHHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCH
T ss_pred             CchhhhhhhcCcc--HHHHHHHHH--------hcCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCH
Confidence            6777777777666  343333311        12457999999864    56789999999998875  45788877899


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc--CCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--PDKG  158 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~  158 (415)
                      ++|+.+++++      +++++++++|+|+++++..++.++.++||+|+++.|+|+.+...++..|.++..++.+  ++ +
T Consensus        65 ~l~~~la~~~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~  137 (381)
T 1v2d_A           65 ALREALAEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-G  137 (381)
T ss_dssp             HHHHHHHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-E
T ss_pred             HHHHHHHHhc------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-c
Confidence            9999999998      5678899999999999999999999999999999999999999999999999999875  32 3


Q ss_pred             CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (415)
Q Consensus       159 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  238 (415)
                      +.+|+++|++.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+ +....++..+ ..++++
T Consensus       138 ~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~  215 (381)
T 1v2d_A          138 FRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTF  215 (381)
T ss_dssp             EECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEE
T ss_pred             CCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEE
Confidence            67899999999988899999999999999999999999999999999999999999999887 4433344433 345789


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSV  316 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~  316 (415)
                      ++.|+||.|+++|+|+||+++++        ++++.+.... ..+++.+++.+.++..+|+... ++++++.++++++++
T Consensus       216 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  287 (381)
T 1v2d_A          216 TVGSAGKRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRR  287 (381)
T ss_dssp             EEEEHHHHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             EEeechhhcCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Confidence            99999999988999999999865        4566665542 2346678888888888886421 356788899999999


Q ss_pred             HHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChh
Q 014936          317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPY  392 (415)
Q Consensus       317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~  392 (415)
                      +++.+.|++. ++. +..|.+|+|+|++++.       .+   +..++.++||.+.||..|+.    .+++||+++.+++
T Consensus       288 ~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~-------~~---~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~  355 (381)
T 1v2d_A          288 DLLAGGLRAM-GLR-VYVPEGTYFLMAELPG-------WD---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEE  355 (381)
T ss_dssp             HHHHHHHHHT-TCC-EECCSBSSEEEEECTT-------CC---HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHH
T ss_pred             HHHHHHHHHC-CCE-ecCCCcceEEEEecCh-------Hh---HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHH
Confidence            9999999986 777 4467778999998863       11   55667788999999988864    6799999988999


Q ss_pred             hHHHHHHHHHHHHHHHHHH
Q 014936          393 SLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       393 ~l~~~l~~l~~~~~~~~~~  411 (415)
                      ++++++++|++++++.++.
T Consensus       356 ~i~~~~~~l~~~l~~~r~~  374 (381)
T 1v2d_A          356 ELHLALERLGRVVNSPREA  374 (381)
T ss_dssp             HHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHhhcccc
Confidence            9999999999998876653

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=7.3e-47  Score=361.82  Aligned_cols=357  Identities=20%  Similarity=0.283  Sum_probs=296.9

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCC-CCCCcEEEeCChH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCT  110 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~i~~g~~  110 (415)
                      +++++||+.|.|+..  ..+++.+.+++.+.+...  ....|++..|..++|+++++++.+.+|.. +++++|++|+|++
T Consensus        42 ~~~~idl~~g~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~  119 (425)
T 1vp4_A           42 DKDAISFGGGVPDPE--TFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQ  119 (425)
T ss_dssp             STTCEECCCCSCCGG--GSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHH
T ss_pred             CCCceeCCCCCCCcc--cCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHH
Confidence            567899999987532  346788999999888653  13578887899999999999997765766 7889999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--------CceEE-EecC
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--------NTVAL-VIIN  181 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v-~i~~  181 (415)
                      +++.+++.++.++||+|+++.|+|+++...++..|.++..++.+++   ++|+++|++.+++        ++++| ++++
T Consensus       120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~  196 (425)
T 1vp4_A          120 QALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVSN  196 (425)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEECS
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECCC
Confidence            9999999999999999999999999999999999999999988542   3899999988865        67887 5789


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      |+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++..++++++.|+||.|+ +|+|+||+++++
T Consensus       197 ~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~  275 (425)
T 1vp4_A          197 FHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGMVAGSK  275 (425)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGGCEEEEECCH
T ss_pred             CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cccceEEEeeCH
Confidence            9999999999999999999999999999999999999887665555655555567899999999998 999999999864


Q ss_pred             CCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhc-CC---CCcCCCCC
Q 014936          262 PCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKE-IP---CISCPHKP  335 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~-~~---~~~~~~~p  335 (415)
                              ++++.+.... ..+.+++++.|.++.++|+... ++++++.+++++++++.+.+.|++ +|   ++. +..|
T Consensus       276 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~-~~~~  346 (425)
T 1vp4_A          276 --------EFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVK-WVKS  346 (425)
T ss_dssp             --------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCE-ECCC
T ss_pred             --------HHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceE-EecC
Confidence                    6777776653 2345678899999999987642 467888899999999999999987 45   576 4468


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeC-ChhhHHHHHHHHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAV-DPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~-~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      .+|+|+|++++..     .+..++...++++ ||.+.||..|+.    .+++||+++. +++++++++++|+++++++.+
T Consensus       347 ~~g~~~~~~~~~~-----~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~~~~  420 (425)
T 1vp4_A          347 EGGLFIWLTLPEG-----FDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGK  420 (425)
T ss_dssp             SBSSEEEEECCTT-----CCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccEEEEEEcCCC-----CCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8899999998641     1345667777655 999999988853    5799999975 789999999999999988766


Q ss_pred             H
Q 014936          411 Q  411 (415)
Q Consensus       411 ~  411 (415)
                      +
T Consensus       421 ~  421 (425)
T 1vp4_A          421 E  421 (425)
T ss_dssp             H
T ss_pred             h
Confidence            5

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=1.4e-46  Score=359.34  Aligned_cols=372  Identities=15%  Similarity=0.166  Sum_probs=296.7

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEeccc---CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMG---DPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA   77 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~   77 (415)
                      |.++++....+++  ++..+.....++.     .+++|||+.|   +|+.  ..++++.+++++.+.+.......|++..
T Consensus        22 ~~~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~G~y~d~~~--~~~~~~~v~~a~~~~~~~~~~~~Y~~~~   92 (420)
T 4f4e_A           22 MSLFSAVELAPRD--PILGLNEAFNADT-----RPTKVNLGVGVYTNEDG--KIPLLRAVRDAEKARVEAGLPRGYLPID   92 (420)
T ss_dssp             CCTTTTCCCCCCC--HHHHHHHHHHHCC-----CSSCEECCCCSCCCTTS--CCCCCHHHHHHHHHHHHTCCCCCCCCTT
T ss_pred             cCHhhcCCcCCCC--hHHHHHHHHHhcC-----CCCcEEeeeeeeECCCC--CccCcHHHHHHHHHHhccCCCCCCCCCC
Confidence            6788888888888  7777776555443     4578999999   5542  2456699999999988875556899989


Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~--~i~i~~g~~~al~~~~--~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~  153 (415)
                      |.+++|+++++++....+..++++  +|++|+|+++++..++  .+++++||+|++++|+|.++...++..|.+++.++.
T Consensus        93 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~  172 (420)
T 4f4e_A           93 GIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPY  172 (420)
T ss_dssp             CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEEC
T ss_pred             CcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeee
Confidence            999999999999975444334678  8999999999999994  456799999999999999999999999999999998


Q ss_pred             cCCCCCCCChhHHHhhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccccc
Q 014936          154 LPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMG  229 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~  229 (415)
                      ..++++.+|++.+++.++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++.
T Consensus       173 ~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~  252 (420)
T 4f4e_A          173 YDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVR  252 (420)
T ss_dssp             EETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHH
T ss_pred             eccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHH
Confidence            444567899999999987   5778899999999999999999999999999999999999999999998742 233333


Q ss_pred             cc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH----HHhhc-cccCCchhHHHHHHHHhhCCCc--
Q 014936          230 VF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER----MKKYF-DILGDPATFIQAAVPSILQQPD--  301 (415)
Q Consensus       230 ~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~a~~~~l~~~~--  301 (415)
                      .+ +..+++++++||||.|+++|+|+||+++...     ++++++.    ++... ..+.+++...|.++..++....  
T Consensus       253 ~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  327 (420)
T 4f4e_A          253 LFAAANLNVFVSSSFSKSFSLYGERVGALSIITD-----SKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELR  327 (420)
T ss_dssp             HHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHH
T ss_pred             HHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcC-----CHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHH
Confidence            33 3456789999999999999999999975321     1234433    32221 2335567888888888887632  


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC
Q 014936          302 ---EVFFKKTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT  375 (415)
Q Consensus       302 ---~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~  375 (415)
                         ++++++.+++++++++.+.+.|+++   +++. +..|.+|+|+|+.++         . +.+..++.++||.+.|+.
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gI~v~~~~  396 (420)
T 4f4e_A          328 ASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFS-FINAQRGMFSYSGLT---------S-AQVDRLREEFGIYAVSTG  396 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHSCSSEEECCCC---------H-HHHHHHHHHHCEECCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCce-eECCCccEEEEeCCC---------H-HHHHHHHHhCCEEecCCC
Confidence               3567888999999999999999986   3666 447889999997663         2 345667788899998852


Q ss_pred             CCCCCCeEEEEeeC-ChhhHHHHHHHHHHHH
Q 014936          376 AVGLKNWLRVTFAV-DPYSLEECLDRIKSFY  405 (415)
Q Consensus       376 ~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~~  405 (415)
                              |++++. +++++++++++|++++
T Consensus       397 --------Ris~~~~~~~~i~~~~~~l~~~l  419 (420)
T 4f4e_A          397 --------RICVAALNTRNLDVVANAIAAVL  419 (420)
T ss_dssp             --------EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             --------eEEEecCCHHHHHHHHHHHHHHh
Confidence                    999964 8888999999998875

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=1.8e-46  Score=358.58  Aligned_cols=353  Identities=18%  Similarity=0.284  Sum_probs=302.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ++++++|+.|++.    ++++|.+.+++.+.+.... ..|++.  ..++++++++++.+.+++.+++++|++++|+++++
T Consensus        60 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~  132 (421)
T 3l8a_A           60 NPELLQMWVADMD----FLPVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI  132 (421)
T ss_dssp             CTTCEECCSSCCC----SCCCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCeeecccCCCC----CCCCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence            6789999999854    7789999999999887533 467654  38999999999998888888899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc-CCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~  191 (415)
                      +.+++++.++||+|+++.|+|+++...+...|.++..++.+ .+.++.+|+++|+++++ ++++++++++|+||||.+++
T Consensus       133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~  212 (421)
T 3l8a_A          133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD  212 (421)
T ss_dssp             HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999876 44556789999999997 68999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      .+++++|+++|+++|+++|+||+|.++.+++....++..+..  .++++++.|+||.|+++|+|+||+++++       +
T Consensus       213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~-------~  285 (421)
T 3l8a_A          213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN-------E  285 (421)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC-------H
Confidence            999999999999999999999999999988876667666644  3678999999999999999999999874       2


Q ss_pred             HHHHHHHhhc-c-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCc
Q 014936          270 KVVERMKKYF-D-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNL  347 (415)
Q Consensus       270 ~~~~~~~~~~-~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~  347 (415)
                      ++.+.+.... . ...+++++++.++.++++. .++++++..++++++++++.+.|+++|++. +..|.++++.|++++.
T Consensus       286 ~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~-~~~~~~~~~~~v~~~~  363 (421)
T 3l8a_A          286 SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIK-VMEPEGTYLVWLDFSA  363 (421)
T ss_dssp             HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCE-EECCSBSSEEEEECGG
T ss_pred             HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EeCCCeeEEEEEeccc
Confidence            5777776653 2 2347888999999888874 357889999999999999999998877888 4478889999998864


Q ss_pred             cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      ..    .+..++...+++++||.+.||..|+.  .+++||+++++++++++++++|+++++
T Consensus       364 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          364 YA----IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG  420 (421)
T ss_dssp             GT----CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred             cC----CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence            21    14567778777778999999998875  689999999999999999999998764

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=3.8e-46  Score=357.70  Aligned_cols=353  Identities=21%  Similarity=0.304  Sum_probs=283.3

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .++++|+|+.|+++    +++++.+++++.+.+..    .....|++..|..+||+++++|+.+  ++++++++|++|+|
T Consensus        54 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~t~G  127 (432)
T 3ei9_A           54 PDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFVSDG  127 (432)
T ss_dssp             TTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEEESC
T ss_pred             CCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEECCC
Confidence            35689999999865    67889999999998763    2335788888999999999999974  55678899999999


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCC------------eEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI------------EVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (415)
                      +++++.++ ..++++||.|+++.|+|+++...++..|.            ++..++++.++++..+++.     .+++++
T Consensus       128 ~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~  201 (432)
T 3ei9_A          128 AKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDI  201 (432)
T ss_dssp             HHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSE
T ss_pred             hHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CCCCCE
Confidence            99999975 67778999999999999999998887774            6777887655454455443     357889


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC-CCCCeEEEccCccccCCCCceEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLG  255 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G  255 (415)
                      +++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++... ++..+. ..++++++.|+||.|+++|+|+|
T Consensus       202 v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G  280 (432)
T 3ei9_A          202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPR-SIFEIPGAEEVAMETASFSNYAGFTGVRLG  280 (432)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCS-SGGGSTTGGGTEEEEEESHHHHCTTTTCCE
T ss_pred             EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCC-ChhhcCCCCCeEEEEecchhccCCcccceE
Confidence            9999999999999999999999999999999999999999988765432 333332 24578999999999999999999


Q ss_pred             EEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          256 WFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      |++++++........+.+.+.... ....++++++|.++.+++.....+++++.+++++++++++.+.|+++ ++. +..
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~  358 (432)
T 3ei9_A          281 WTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYD-VYG  358 (432)
T ss_dssp             EEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EEE
T ss_pred             EEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cce-ecC
Confidence            999976320000001255555442 23456788999998888864334678899999999999999999988 777 436


Q ss_pred             CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      |.+++|+|+.++.      .+..+++..+++++||.+.||..|+.  ++++||+++.+++++++++++|++..+
T Consensus       359 ~~~~~~~~~~~~~------~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~~  426 (432)
T 3ei9_A          359 GKNAPYVWVHFPN------QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYK  426 (432)
T ss_dssp             CSSSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             CCcceEEEEECCC------CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHhh
Confidence            6789999999872      25778888888888999999998875  689999998899999999999987643

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=1.2e-45  Score=353.88  Aligned_cols=390  Identities=19%  Similarity=0.310  Sum_probs=299.9

Q ss_pred             cccCCccCCcc-hhhHHHHHHHhh-hcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc----------CCC
Q 014936            3 ISNGGIDNTGS-IITIKGMLSLLM-QSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----------EKF   70 (415)
Q Consensus         3 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~----------~~~   70 (415)
                      +|+|+...... ..++-+.+..+. +.++...++..+++|+.+.+.    + .++.+.+++.+....          ...
T Consensus         2 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~   76 (428)
T 1iay_A            2 LSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQ----L-CLDLIEDWIKRNPKGSICSEGIKSFKAI   76 (428)
T ss_dssp             CCTTGGGC-----CCTTHHHHHHHHSBCCSSSSTTSBEECSSCCCC----S-SHHHHHHHHHHCTTSSTTC----CHHHH
T ss_pred             cccccccccCcccccccchhhhhccCCCCcccCCCceeeeccccch----h-hHHHHHHHHHhccccccccccccccHhh
Confidence            57787665533 223333333232 345544445678999987632    2 346788888753210          123


Q ss_pred             CCCCCCCCcHHHHHHHHHHHhhhCCCC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-HhCCCe
Q 014936           71 NGYAPTAGLPLTRRAIAEYLSRDLPYK--LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-AFRHIE  147 (415)
Q Consensus        71 ~~y~~~~g~~~lr~~ia~~~~~~~~~~--~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~-~~~g~~  147 (415)
                      ..|+++.|..++|+++|+++++.+|..  +++++|++++|+++++.+++++++++||+|+++.|+|+.+...+ ...|++
T Consensus        77 ~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~  156 (428)
T 1iay_A           77 ANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQ  156 (428)
T ss_dssp             HHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCE
T ss_pred             cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCE
Confidence            578888889999999999999877755  77899999999999999999999999999999999999987755 468999


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG  221 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~  221 (415)
                      ++.++.+.++++.+|++.+++++++      +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.++
T Consensus       157 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~  236 (428)
T 1iay_A          157 LIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFD  236 (428)
T ss_dssp             EEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCS
T ss_pred             EEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccC
Confidence            9999886555678899999988753      6888999999999999999999999999999999999999999998876


Q ss_pred             CCCcccccccCC--------CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHH
Q 014936          222 DKPFVPMGVFGS--------TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAV  293 (415)
Q Consensus       222 ~~~~~~~~~~~~--------~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  293 (415)
                      +....++..+..        .++++++.|+||.|+++|+|+||+++++       +++++.++.... .++.++++|.++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~a~  308 (428)
T 1iay_A          237 TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN-------DDVVNCARKMSS-FGLVSTQTQYFL  308 (428)
T ss_dssp             SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESC-------HHHHHHHHHHHT-TSCCCHHHHHHH
T ss_pred             CCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCC-------HHHHHHHHHHHh-cccCCHHHHHHH
Confidence            654444444432        3678999999999999999999999854       257777765533 356788999999


Q ss_pred             HHhhCCCc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC-CCCHHHHHHHHHhhcCeE
Q 014936          294 PSILQQPD--EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD-IIDDIDFCFKLAKEESVI  370 (415)
Q Consensus       294 ~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~-~~~~~~~~~~ll~~~gi~  370 (415)
                      ..+|+...  ++++++.+++++++++.+.+.|+++ ++. +..+.+|+|+|++++...... ..+..++...+++++||.
T Consensus       309 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~  386 (428)
T 1iay_A          309 AAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLN  386 (428)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEE
T ss_pred             HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-ccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEE
Confidence            99997632  2467888899999999999999988 777 435668999999986421000 002346667766666999


Q ss_pred             EEcCCCCCC--CCeEEEEee-CChhhHHHHHHHHHHHHHH
Q 014936          371 ILPGTAVGL--KNWLRVTFA-VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       371 v~~g~~~~~--~~~iRi~~~-~~~~~l~~~l~~l~~~~~~  407 (415)
                      +.||..|+.  ++++||+++ .+++++++++++|++++++
T Consensus       387 v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~  426 (428)
T 1iay_A          387 VSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGV  426 (428)
T ss_dssp             CEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred             EeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence            999988765  579999997 8899999999999988753

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=3.8e-45  Score=342.78  Aligned_cols=333  Identities=18%  Similarity=0.264  Sum_probs=284.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +.+++++|+.|.+.    +++++.+++++.+.+.  ....|++ .+..++|+++++++      ++++++|++|+|++++
T Consensus        30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~-~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a   96 (363)
T 3ffh_A           30 GLTKITKLSSNENP----LGTSKKVAAIQANSSV--ETEIYPD-GWASSLRKEVADFY------QLEEEELIFTAGVDEL   96 (363)
T ss_dssp             TCSCCEECSSCSCT----TCCCHHHHHHHHTCBS--CCCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred             CCCceEEccCCCCC----CCCCHHHHHHHHHHHH--HhhcCCC-cchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence            35689999999864    6788999999988664  3456765 58899999999999      4678999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.++.++||+|+++.|+|+.+...++..|.++..++.++  ++.+|+++++++++++++++++++|+||||.++|.
T Consensus        97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~  174 (363)
T 3ffh_A           97 IELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL  174 (363)
T ss_dssp             HHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence            9999999999999999999999999999999999999999864  56799999999999899999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++.+|++.|++ |+++|+||+|+++.+ +............++++++.|+||.++++|+|+||+++++        +++
T Consensus       175 ~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~  244 (363)
T 3ffh_A          175 ADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK--------EII  244 (363)
T ss_dssp             HHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH--------HHH
T ss_pred             HHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH--------HHH
Confidence            999999999988 999999999998887 4434444444556789999999999999999999999954        688


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.++.... .++.+++.+.++..+|+.  .+++++.+++++++++.+.+.|++++++. + .|..|+|+|++++.     
T Consensus       245 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~~-----  314 (363)
T 3ffh_A          245 RQLNIVRP-PFNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPANGNFVLIDLGI-----  314 (363)
T ss_dssp             HHHHHTCC-SCCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCCCSSEEEEECSS-----
T ss_pred             HHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCCCCeEEEEECCC-----
Confidence            88877654 567899999999999975  47889999999999999999999866887 4 46667889998863     


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                        +..++...+. ++||.+.||..|+.++++||+++ ++++++.+++.|+++
T Consensus       315 --~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          315 --EAGTIFSYLE-KNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL  362 (363)
T ss_dssp             --CHHHHHHHHH-HTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred             --CHHHHHHHHH-HCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence              4667777665 57999999999988899999998 889999999998875

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=9.3e-46  Score=351.15  Aligned_cols=371  Identities=21%  Similarity=0.312  Sum_probs=300.0

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP   80 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~   80 (415)
                      +|++.....++  .++.+...    .    .+++++||+.|.|+..  ..+++.+.+++.+.+...  ....|++..|..
T Consensus        10 ~~~~~~~~~~~--~~~~~~~~----~----~~~~~i~l~~g~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~   77 (397)
T 2zyj_A           10 FGKGAGRIQAS--TIRELLKL----T----QRPGILSFAGGLPAPE--LFPKEEAAEAAARILREKGEVALQYSPTEGYA   77 (397)
T ss_dssp             SCGGGGGCCCC--HHHHHHHH----H----TSTTCEEESSCCCCGG--GCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCH
T ss_pred             hhhhhcccCch--HHHHHHhh----c----cCCCceecCCCCCCch--hCCHHHHHHHHHHHHHhcchhhhCCCCCCCCH
Confidence            55666665555  34444331    1    2457899999987532  336788999998887642  235788878999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      ++|+++++++      ++++++|++|+|+++++.+++.++.++||+|+++.|+|+++...++..|.++..++.+++   +
T Consensus        78 ~l~~~la~~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~  148 (397)
T 2zyj_A           78 PLRAFVAEWI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---G  148 (397)
T ss_dssp             HHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---E
T ss_pred             HHHHHHHHHh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---C
Confidence            9999999999      467889999999999999999999999999999999999999999999999999987542   3


Q ss_pred             CChhHHHhhcCC-CceEE-EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC---C
Q 014936          161 VDLDDIESLADQ-NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST---V  235 (415)
Q Consensus       161 ~~~~~l~~~~~~-~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~---~  235 (415)
                      +|+++|++.+++ +++++ ++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++....++..++.+   +
T Consensus       149 ~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~  228 (397)
T 2zyj_A          149 PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYP  228 (397)
T ss_dssp             ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCC
T ss_pred             CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCC
Confidence            899999998875 67777 578999999999999999999999999999999999999998876655555555544   6


Q ss_pred             CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ  314 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  314 (415)
                      +++++.|+||+|+ +|+|+||+++++        ++++.+.... ..+.+.+++.+.++.++|+....+++++.++++++
T Consensus       229 ~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  299 (397)
T 2zyj_A          229 GVIYLGSFSKVLS-PGLRVAFAVAHP--------EALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYRE  299 (397)
T ss_dssp             CEEEEEESTTTTC-GGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred             eEEEEeccccccc-ccceeEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            7899999999988 999999999864        6777776553 23355688999999999986422568888899999


Q ss_pred             HHHHHHHHhhc-CC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----CCCeEEEEee
Q 014936          315 SVDICYNKIKE-IP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----LKNWLRVTFA  388 (415)
Q Consensus       315 ~~~~l~~~l~~-~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~iRi~~~  388 (415)
                      +++.+.+.|++ +| ++. +..|.+|+|+|++++..     .+..++...+++ +||.+.||..|+    .++++||+++
T Consensus       300 ~~~~l~~~L~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~~-~gi~v~~g~~f~~~~~~~~~iRis~~  372 (397)
T 2zyj_A          300 KAQAMLHALDREVPKEVR-YTRPKGGMFVWMELPKG-----LSAEGLFRRALE-ENVAFVPGGPFFANGGGENTLRLSYA  372 (397)
T ss_dssp             HHHHHHHHHHHHSCTTSE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHH-TTEEEEESGGGCTTSCCTTEEEEECS
T ss_pred             HHHHHHHHHHHHCCCCeE-EccCCccEEEEEEcCCC-----CCHHHHHHHHHH-CCCEEechHHhcCCCCCCCeEEEEcC
Confidence            99999999986 67 577 44688899999998641     246677777755 499999998885    3589999997


Q ss_pred             C-ChhhHHHHHHHHHHHHHHHHH
Q 014936          389 V-DPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       389 ~-~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      . +++++++++++|+++++++.+
T Consensus       373 ~~~~~~i~~~~~~l~~~l~~~~~  395 (397)
T 2zyj_A          373 TLDREGIAEGVRRLGRALKGLLA  395 (397)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh
Confidence            5 689999999999999987653

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=8.3e-46  Score=355.99  Aligned_cols=352  Identities=16%  Similarity=0.198  Sum_probs=296.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .++++++|+.|++.    +++++.+++++.+.+..+....|++..|..++|+++++++++.+|..+++++|++|+|++++
T Consensus        42 ~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~a  117 (437)
T 3g0t_A           42 TGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQG  117 (437)
T ss_dssp             HTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred             cCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHH
Confidence            36789999999964    67789999999998876443689988899999999999999888888899999999999999


Q ss_pred             HHHHHHHhc--CCCC--EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCCceEEEecCCCCccc
Q 014936          113 IDVAMALLS--RPGA--NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCG  187 (415)
Q Consensus       113 l~~~~~~l~--~~gd--~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG  187 (415)
                      +.+++.++.  ++||  +|+++.|+|.++...++..|.+++.++++ ++++.+|++.|++++ +++++++++++|+||||
T Consensus       118 l~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG  196 (437)
T 3g0t_A          118 CFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQTGQFCSIIYSNPNNPTW  196 (437)
T ss_dssp             HHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTC
T ss_pred             HHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhcCCceEEEEeCCCCCCC
Confidence            999999998  9999  99999999999999999999999999986 456678999999999 67889999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc----cc-cccCC-CCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV----PM-GVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~----~~-~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      .+++.+++++|+++|+++|+++|+||+|+.+.+++....    ++ ..+.. .++++++.|+||.++++|+|+||+++++
T Consensus       197 ~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  276 (437)
T 3g0t_A          197 QCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISG  276 (437)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECH
T ss_pred             CcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECH
Confidence            999999999999999999999999999999887632211    11 33333 5678999999999989999999999965


Q ss_pred             CCCCCChHHHHH-H-----------------HHhhc-cccCCchhHHHHHHHHhhCCCcHHH---HHHHHHHHHHHHHHH
Q 014936          262 PCGMFRKPKVVE-R-----------------MKKYF-DILGDPATFIQAAVPSILQQPDEVF---FKKTLNLLKQSVDIC  319 (415)
Q Consensus       262 ~~~~~~~~~~~~-~-----------------~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~---~~~~~~~~~~~~~~l  319 (415)
                              ++++ .                 +.... ...++++++.+.++..+|+.. ..+   +++.+++++++++.+
T Consensus       277 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l  347 (437)
T 3g0t_A          277 --------KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKAC-NDGEYNFRDSVIEYGRKARIM  347 (437)
T ss_dssp             --------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHH-HTTSCCHHHHHHHHHHHHHHH
T ss_pred             --------HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCc-HhHHHHHHHHHHHHHHHHHHH
Confidence                    5666 5                 55443 235678889999999998752 112   788999999999999


Q ss_pred             HHHhhcCCCCcCCC------CC-CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC--CeEEEEeeC-
Q 014936          320 YNKIKEIPCISCPH------KP-EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK--NWLRVTFAV-  389 (415)
Q Consensus       320 ~~~l~~~~~~~~~~------~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~iRi~~~~-  389 (415)
                      .+.|+++ ++. +.      .| .+++|+|++++.      .+..++...++ ++||.+.|+..|+..  +++||+++. 
T Consensus       348 ~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~iRis~~~~  418 (437)
T 3g0t_A          348 KKMFLDN-GFN-IVYDKDGNEPLADGFYFTVGYKG------MDSSKLIEKFV-RYGMCAITLKTTGSKRNEAMRICTSLL  418 (437)
T ss_dssp             HHHHHTT-TEE-ESSCEETTEECCSSSEEEEEETT------CCHHHHHHHHH-HTTEECEESTTTTCCCTTCEEEECSSS
T ss_pred             HHHHHHc-CCE-EeccccCCCCCceeEEEEEecCC------CCHHHHHHHHH-HcCeEEeeccccCCCCCCEEEEEEecC
Confidence            9999998 777 43      25 889999998862      25677777775 569999999988763  789999964 


Q ss_pred             ChhhHHHHHHHHHHHHHH
Q 014936          390 DPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       390 ~~~~l~~~l~~l~~~~~~  407 (415)
                      +++++++++++|++++++
T Consensus       419 ~~e~i~~~~~~l~~~~~~  436 (437)
T 3g0t_A          419 PESQFPDLEKRLQMLNAE  436 (437)
T ss_dssp             CGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhc
Confidence            899999999999988753

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=8.7e-46  Score=355.02  Aligned_cols=348  Identities=16%  Similarity=0.239  Sum_probs=285.8

Q ss_pred             cceeEecccCC-CCCCCCCCcHHH--HHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc---EEEeCC
Q 014936           35 KKVISLAMGDP-TVHSCFHTTHVA--TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSG  108 (415)
Q Consensus        35 ~~~i~l~~g~~-~~~~~~~~~~~~--~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~---i~i~~g  108 (415)
                      ++++||+.|+| +    ++.++.+  .+++.+.+.......|+++.|..++|+++|+++.+.. .++++++   |++|+|
T Consensus        47 ~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g  121 (430)
T 2x5f_A           47 STTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNA  121 (430)
T ss_dssp             TCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESH
T ss_pred             CCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCC
Confidence            56899999997 4    3334444  6666555543235689988899999999999998764 6678888   999999


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-CCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCC
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGN  184 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~n  184 (415)
                      +++++..++.+++++||+|+++.|+|+++...++. .|.++..++.++++ +.+|+++|++.+++   +++++++++|+|
T Consensus       122 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~n  200 (430)
T 2x5f_A          122 LTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNN  200 (430)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCT
T ss_pred             chHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCC
Confidence            99999999999999999999999999999999999 99999999886533 67999999998876   788999999999


Q ss_pred             ccccCCCHHHHHHHHHHHhh-----cCcEEEEccccCCcccCCCCccccc-ccCC-CCC---eEEEccCccccCCCCceE
Q 014936          185 PCGNVYSYQHLQKLAETANK-----LKTLVIADEVYGHLVFGDKPFVPMG-VFGS-TVP---ILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~~-~~~~-~~~---~i~~~s~sK~~~~~G~r~  254 (415)
                      |||.+++.+++++|+++|++     +|+++|+||+|.++.+++....++. .+.. .++   +++++|+||.|+++|+|+
T Consensus       201 ptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri  280 (430)
T 2x5f_A          201 PTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRV  280 (430)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCC
T ss_pred             CCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCe
Confidence            99999999999999999999     9999999999999988765444443 4432 456   899999999998899999


Q ss_pred             EEEEe---eCCCCCCChHHHHHHHHhhcc-----ccCCchhHHHHHHHHhhC-CCc-HHHHHHHHHHHHHHHHHHHHHhh
Q 014936          255 GWFVT---TDPCGMFRKPKVVERMKKYFD-----ILGDPATFIQAAVPSILQ-QPD-EVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       255 G~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~~l~-~~~-~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      ||+++   ++        ++++.+.....     .+.+++++.|.++.++|+ ... .+.+++.+++++++++.+.+.|+
T Consensus       281 G~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~  352 (430)
T 2x5f_A          281 GFMTFGTSDQ--------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY  352 (430)
T ss_dssp             EEEEEBCCCH--------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEecCCH--------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998   54        67777765432     346789999999999997 631 13334488999999999999998


Q ss_pred             ----cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHH
Q 014936          325 ----EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLD  399 (415)
Q Consensus       325 ----~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~  399 (415)
                          +. ++. +..|.+|+|+|++++.      .+..++...+++++||.+.||    .++++||+++ .++++++++++
T Consensus       353 ~~~~~~-g~~-~~~~~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~  420 (430)
T 2x5f_A          353 ADQYHS-HWQ-AYDFNSGYFMAIKVHD------VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFD  420 (430)
T ss_dssp             CGGGTT-TEE-ECCCCBSSEEEEEESS------SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHH
T ss_pred             hhCCCC-Cce-eeCCCceEEEEeCCCC------CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHH
Confidence                55 676 4477888999998861      256778888766589999998    3579999997 88999999999


Q ss_pred             HHHHHHHHH
Q 014936          400 RIKSFYQRH  408 (415)
Q Consensus       400 ~l~~~~~~~  408 (415)
                      +|+++++++
T Consensus       421 ~l~~~l~~~  429 (430)
T 2x5f_A          421 SIAKAIDDL  429 (430)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999998754

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=7.2e-45  Score=339.74  Aligned_cols=335  Identities=17%  Similarity=0.286  Sum_probs=287.1

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .++.+++|+.|.+.    +++++.+++++.+.+..  ...|++ .+..++|+.+++++      ++++++|++|+|++++
T Consensus        14 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~~~a   80 (354)
T 3ly1_A           14 STDNPIRINFNENP----LGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHH------QVEAPSILLTAGSSEG   80 (354)
T ss_dssp             CSSSCEECSSCCCS----SCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHT------TSCGGGEEEESHHHHH
T ss_pred             CCCceEEccCCCCC----CCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHh------CCChHHEEEeCChHHH
Confidence            47789999999854    67889999999998774  457865 57899999999998      4678999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC--CCceEEEecCCCCccccCC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNVY  190 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~~~  190 (415)
                      +.+++.++.++||+|+++.|+|+++...++..|.+++.++.++  ++.+|+++|++.++  ++++++++++|+||||.++
T Consensus        81 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~  158 (354)
T 3ly1_A           81 IRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTIT  158 (354)
T ss_dssp             HHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCc
Confidence            9999999999999999999999999999999999999998753  47799999999998  7899999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC-CCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      +.+++.+|+++| ++|+++|+||+|+++.+++.....+...+.. +++++++|+||.|+++|+|+||+++++        
T Consensus       159 ~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------  229 (354)
T 3ly1_A          159 PADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP--------  229 (354)
T ss_dssp             CHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH--------
T ss_pred             CHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH--------
Confidence            999999999999 8999999999999988776544444444444 678999999999999999999999854        


Q ss_pred             HHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          270 KVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      ++++.+...... ++++++.+.++..+|+.  .+++++.+++++++++.+.+.|+++ ++. + .|..|.|+|++++.  
T Consensus       230 ~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~~~~~~~~~~~~~--  301 (354)
T 3ly1_A          230 TVIALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LPSEGNFVFHQLVV--  301 (354)
T ss_dssp             HHHHHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECSS--
T ss_pred             HHHHHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCCceEEEEECCC--
Confidence            688888776553 68899999999999985  3788999999999999999999988 777 4 46678889998863  


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                           +..++...+ .++||.+. |..++.++++||+++ ++++++++++.|++++++
T Consensus       302 -----~~~~~~~~l-~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          302 -----PLKDYQTHM-ADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             -----CHHHHHHHH-HHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred             -----CHHHHHHHH-HHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence                 456666666 46799998 777777899999997 688999999999988763

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=8.4e-45  Score=340.69  Aligned_cols=333  Identities=18%  Similarity=0.230  Sum_probs=283.4

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      .+++++|+.|.+.    +++++.+++++.+.+.  ....|++..+ .++|+++|+++      ++++++|++|+|+++++
T Consensus        29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~   95 (365)
T 3get_A           29 VKEVIKLASNENP----FGTPPKAIECLRQNAN--KAHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVI   95 (365)
T ss_dssp             CSCCEECSSCCCT----TCSCHHHHHHHHHHGG--GTTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            4679999999864    6788999999999887  3457887666 89999999998      46789999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .+++.+++++||+|+++.|+|..+...++..|.++..+++ +++++ +|+++++++++++++++++++|+||||.++|.+
T Consensus        96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~  173 (365)
T 3get_A           96 EFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDAS  173 (365)
T ss_dssp             HHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHH
Confidence            9999999999999999999999999999999999999987 34567 999999999998999999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCccc--CCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVF--GDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      ++.+|+++| ++|+++|+||+|+.+.+  .+.... .....+..+++++++|+||.|+++|+|+||+++++        +
T Consensus       174 ~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~  244 (365)
T 3get_A          174 EATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA--------N  244 (365)
T ss_dssp             HHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH--------H
T ss_pred             HHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH--------H
Confidence            999999999 56999999999998775  433222 22333445678999999999999999999999854        6


Q ss_pred             HHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      +++.+..... .++++++.+.++..+|+.  .+++++.+++++++++.+.+.|+++ ++. + .+..|.|+|++++..  
T Consensus       245 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~~~~~~~~~~~~~--  316 (365)
T 3get_A          245 IISAFYKLRA-PFNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKH-NIK-I-IDSYTNFITYFFDEK--  316 (365)
T ss_dssp             HHHHHHHHSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECSSS--
T ss_pred             HHHHHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCCC--
Confidence            8888877654 356889999999999985  4788999999999999999999988 777 4 456677899988641  


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                          +..++...+. ++||.+.||..|+ ++++|++++ ++++++++++.|++++
T Consensus       317 ----~~~~~~~~l~-~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          317 ----NSTDLSEKLL-KKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             ----CHHHHHHHHH-TTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHH-HCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence                4667777664 5699999999988 899999998 7889999999998765

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=5.2e-44  Score=335.55  Aligned_cols=331  Identities=18%  Similarity=0.292  Sum_probs=284.6

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCC-CCCcEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~i~~g~~~a  112 (415)
                      ++.+++|+.|.+.    +++++.+++++.+.+.......|++ .+..++|+++++++      ++ ++++|++|+|++++
T Consensus        29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a   97 (367)
T 3euc_A           29 SHGLVKLDAMENP----YRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDEI   97 (367)
T ss_dssp             CTTCEECCSSCCC----CCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHHH
T ss_pred             CCCeeEccCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHHH
Confidence            5689999999854    6788999999999887544567877 58899999999998      44 67899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~  191 (415)
                      +.+++.++.++||+|+++.|+|..+...++..|.++..++.++  ++.+|++++++++++ +++++++++|+||||.+++
T Consensus        98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~  175 (367)
T 3euc_A           98 ISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFD  175 (367)
T ss_dssp             HHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999999864  567999999999987 8999999999999999999


Q ss_pred             HHHHHHHHHHHhhc--CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          192 YQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       192 ~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      .+++++|+++|++|  |+++|+||+|+.+...+  .  ...+...++++++.|+||. +++|+|+||+++++        
T Consensus       176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~--------  242 (367)
T 3euc_A          176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--W--MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDP--------  242 (367)
T ss_dssp             HHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--S--GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECH--------
T ss_pred             HHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--h--HHHHhhCCCEEEEecchhh-cccccCceeeeeCH--------
Confidence            99999999999999  99999999999866332  2  2233445678999999999 99999999999864        


Q ss_pred             HHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc
Q 014936          270 KVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL  349 (415)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~  349 (415)
                      ++.+.+..... .++.+++.+.++..+|+.  .+++++.+++++++++.+.+.|+++|++. + .|..|+|+|++++   
T Consensus       243 ~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~---  314 (367)
T 3euc_A          243 QWLEQLDKVRP-PYNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPSAANFLLARVP---  314 (367)
T ss_dssp             HHHHHHGGGCC-SSCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCCSSSEEEEECS---
T ss_pred             HHHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC---
Confidence            67887776644 467899999999999986  67889999999999999999999998888 4 6777889998885   


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                           +..++...+ .++||.+.+|..|+.  .+++||+++ ++++++++++.|++++
T Consensus       315 -----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l  365 (367)
T 3euc_A          315 -----DAAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASL  365 (367)
T ss_dssp             -----CHHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred             -----CHHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHh
Confidence                 355666665 678999999988753  689999998 7899999999998775

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=1.1e-44  Score=346.11  Aligned_cols=378  Identities=13%  Similarity=0.156  Sum_probs=289.2

Q ss_pred             ccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l   82 (415)
                      +.+.....++  .+........+.... .++.++++|+.|+| +...++++++.+.+++.+.... ....|++..|.+++
T Consensus        10 ~~~~~~~~~~--~~~~~~~~~~~~~~~-~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l   85 (418)
T 3rq1_A           10 KHAKGKKLKD--VIFVTAGQAQADAKE-NGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIPDF   85 (418)
T ss_dssp             TTTTTCCCCC--HHHHHHHHHHHHHHH-HCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCHHH
T ss_pred             hhcCCCCCCc--hHHHHHHHHHhhhhh-hcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChHHH
Confidence            3344444555  444544444333311 23668999999986 2123477889998888764432 23478888899999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  162 (415)
                      |+++++++....+.. .+++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.++..+++ +.+|
T Consensus        86 r~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d  163 (418)
T 3rq1_A           86 LCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFN  163 (418)
T ss_dssp             HHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBC
T ss_pred             HHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcC
Confidence            999999997644311 12399999999999999999999999999999999999999999999999999985543 6799


Q ss_pred             hhHHHhhcCC----Cce-EEEecCC-CCccccCCCHHHHHHHHHHHh------hcCcEEEEccccCCcccCCCCcccccc
Q 014936          163 LDDIESLADQ----NTV-ALVIINP-GNPCGNVYSYQHLQKLAETAN------KLKTLVIADEVYGHLVFGDKPFVPMGV  230 (415)
Q Consensus       163 ~~~l~~~~~~----~~~-~v~i~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~~~~~~~~~~~~~~~~~  230 (415)
                      ++.|++.+++    +++ ++++++| +||||.+++.+++++|+++|+      ++|+++|+||+|.++.+++....++..
T Consensus       164 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~  243 (418)
T 3rq1_A          164 HEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFN  243 (418)
T ss_dssp             HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGG
T ss_pred             HHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHH
Confidence            9999998874    555 7788899 999999999999999999999      899999999999998876543223222


Q ss_pred             -cC-CCCC--eEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-----ccCCchhHHHHHHHHhhCCCc
Q 014936          231 -FG-STVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-----ILGDPATFIQAAVPSILQQPD  301 (415)
Q Consensus       231 -~~-~~~~--~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~~~~l~~~~  301 (415)
                       .. ..++  +++++||||.|+++|+|+||+++...     ++++++.+.....     ....++..+|.++..+|++..
T Consensus       244 ~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~  318 (418)
T 3rq1_A          244 KFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISD-----DEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPA  318 (418)
T ss_dssp             GGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEES-----SHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHH
T ss_pred             HHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeC-----CHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHH
Confidence             21 1234  58899999999999999999998210     1267777765432     124578899999999997632


Q ss_pred             -----HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936          302 -----EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA  376 (415)
Q Consensus       302 -----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~  376 (415)
                           .+.+++.+++++++++.+.+.|+++ ++. +..|.+++|+|++++        +..++... |.++||.+.||. 
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~~-l~~~gi~v~~g~-  386 (418)
T 3rq1_A          319 KFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLP-MLPYRGGFFITIPTD--------SANAICEE-LKKEHIYVIALA-  386 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCCCSSSEEEEECT--------THHHHHHH-HHHTTEECEECS-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCCCceEEEEcCCC--------CHHHHHHH-HHhCCEEEecCC-
Confidence                 1233466788899999999999988 787 447889999998774        45666654 577899999984 


Q ss_pred             CCCCCeEEEEee-CChhhHHHHHHHHHHHHHHH
Q 014936          377 VGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       377 ~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~  408 (415)
                          +++||+++ .+++++++++++|+++++++
T Consensus       387 ----~~iRis~~~~~~~~i~~~~~~l~~~l~~~  415 (418)
T 3rq1_A          387 ----NGIRIAACGIPKCQMTGLAEKIYNAMKSL  415 (418)
T ss_dssp             ----SEEEEEGGGSCHHHHTTHHHHHHHHHHHT
T ss_pred             ----CCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence                78999997 69999999999999998754

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=5e-45  Score=346.36  Aligned_cols=352  Identities=18%  Similarity=0.249  Sum_probs=271.1

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .++++++|+.|+++    +++++.+++++.+.+...    ....|++..|..++|+++++++.  .|. +++++|++|+|
T Consensus        31 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~-~~~~~v~~~~G  103 (400)
T 3asa_A           31 PQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGF-VDAKEIFISDG  103 (400)
T ss_dssp             TTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTS-SCGGGEEEESC
T ss_pred             CCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCC-CCHHHEEEccC
Confidence            36789999999864    567889999998877531    24578877899999999999964  343 67899999999


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCe-EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE-VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG  187 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG  187 (415)
                      +++++..++.. +++||+|+++.|+|+++...++..|.+ +..++.++++++..++++   .  +++++|++++|+||||
T Consensus       104 ~~~al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~---~--~~~~~v~l~~p~nptG  177 (400)
T 3asa_A          104 AKVDLFRLLSF-FGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE---D--THIDILCLCSPNNPTG  177 (400)
T ss_dssp             HHHHHHHHHHH-HCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT---T--CCCSEEEEESSCTTTC
T ss_pred             hHHHHHHHHHH-cCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh---c--cCccEEEEeCCCCCCC
Confidence            99999987654 478999999999999999999999998 999987654444444432   1  4678999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF  266 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  266 (415)
                      .++|.+++++|+++|+++|+++|+||+|.++.+++....++..++. .+++++++|+||.|+++|+|+||+++++.....
T Consensus       178 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~  257 (400)
T 3asa_A          178 TVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYA  257 (400)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCT
T ss_pred             CcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccc
Confidence            9999999999999999999999999999988776543444545432 356899999999999999999999986521000


Q ss_pred             ChHHHHHHHHhh-c-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEe
Q 014936          267 RKPKVVERMKKY-F-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK  344 (415)
Q Consensus       267 ~~~~~~~~~~~~-~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~  344 (415)
                      .... ++.+... . ....+++++.|.++..+|+..   ++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++
T Consensus       258 ~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~  331 (400)
T 3asa_A          258 DGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLAT-GFE-VFGGEHAPYLWVK  331 (400)
T ss_dssp             TSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHT-TCE-EEECSSSSEEEEE
T ss_pred             hhhh-HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHC-CCe-eeCCCCceEEEEe
Confidence            0000 2333221 1 222467889999998888753   57788899999999999999987 777 4466788999998


Q ss_pred             -cCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          345 -LNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       345 -l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                       ++..     .+..++...+++++||.+.||..|+.  ++++||++..+++++++++++|++++++.
T Consensus       332 ~~~~~-----~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~  393 (400)
T 3asa_A          332 PTQAN-----ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPALQ  393 (400)
T ss_dssp             CCCTT-----CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC-----
T ss_pred             ccCCC-----CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHHhh
Confidence             7531     13446777777778999999988863  57999998788999999999999888754

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=1.7e-44  Score=342.95  Aligned_cols=361  Identities=17%  Similarity=0.155  Sum_probs=280.3

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL   94 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~   94 (415)
                      .+......+..+.     .+.+++|+.|.+ +.....++.+.+++++.+.........|++..|.+++|+++++++++.+
T Consensus        14 ~i~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~   88 (401)
T 7aat_A           14 PILGVTEAFKRDT-----NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGEN   88 (401)
T ss_dssp             HHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTT
T ss_pred             hhHHHHHHHhhCC-----CCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCC
Confidence            4555555444332     455899999997 5433334557899988887764345689988899999999999998777


Q ss_pred             CCCCCCCcEEE--eCChHHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936           95 PYKLTPNDVFV--TSGCTQAIDVAMALLS---RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus        95 ~~~~~~~~i~i--~~g~~~al~~~~~~l~---~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      |..+++++|++  |+|+++++.+++.++.   ++||+|++++|+|..+...++..|.++..++.+.+.++.+|++.+++.
T Consensus        89 ~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~  168 (401)
T 7aat_A           89 SEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMED  168 (401)
T ss_dssp             CHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHH
T ss_pred             ccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHH
Confidence            76677999987  9999999998887765   899999999999999999999999999999986555678999976665


Q ss_pred             cC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC--ccccccc-CCCCCeEEEccC
Q 014936          170 AD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP--FVPMGVF-GSTVPILTLGSL  243 (415)
Q Consensus       170 ~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~~~~~i~~~s~  243 (415)
                      ++   ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++..  ..++..+ ...+++++++|+
T Consensus       169 l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~  248 (401)
T 7aat_A          169 ISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSY  248 (401)
T ss_dssp             HTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEEC
T ss_pred             HHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecC
Confidence            54   56789999999999999999999999999999999999999999998876431  2222222 345678999999


Q ss_pred             ccccCCCCceEEEEEeeCCCCCCChHH----HHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHHH
Q 014936          244 SKRWIVPGWRLGWFVTTDPCGMFRKPK----VVERMKKYF-DILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLLK  313 (415)
Q Consensus       244 sK~~~~~G~r~G~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~  313 (415)
                      ||.|+++|+|+||++++..     +++    +...++... ..+.+++...|.++..++.+..     .+++++.+++++
T Consensus       249 sK~~~~~G~RiG~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  323 (401)
T 7aat_A          249 AKNMGLYGERAGAFTVICR-----DAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRII  323 (401)
T ss_dssp             TTTSCCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccccccCceEEEEEEeC-----CHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987421     123    334444432 2345566778888877776521     355778889999


Q ss_pred             HHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-C
Q 014936          314 QSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-V  389 (415)
Q Consensus       314 ~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~  389 (415)
                      ++++.+.+.|+++   +++. +..|.+++|+|+.++          .+++..+++++||.+.|+        +|++++ .
T Consensus       324 ~~r~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~--------~Ris~~~~  384 (401)
T 7aat_A          324 SMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKD--------GRISVAGV  384 (401)
T ss_dssp             HHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEEEGGGC
T ss_pred             HHHHHHHHHHHhcCCCCCCc-eecCCcceEEecCCC----------HHHHHHHHHhCCEeccCC--------CeEEeccC
Confidence            9999999999886   2355 446889999997653          345577778889999765        599995 6


Q ss_pred             ChhhHHHHHHHHHHHH
Q 014936          390 DPYSLEECLDRIKSFY  405 (415)
Q Consensus       390 ~~~~l~~~l~~l~~~~  405 (415)
                      ++++++.+++.|++++
T Consensus       385 ~~~~i~~~~~~l~~~~  400 (401)
T 7aat_A          385 ASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             CTTTHHHHHHHHHHHH
T ss_pred             ChhhHHHHHHHHHHHh
Confidence            7777999999998765

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=1.8e-44  Score=342.26  Aligned_cols=358  Identities=15%  Similarity=0.135  Sum_probs=282.8

Q ss_pred             hHHHHHHHhhhcccccccCcceeEeccc---CCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCcHHHHHHHHHHHh
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMG---DPTVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAGLPLTRRAIAEYLS   91 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~y~~~~g~~~lr~~ia~~~~   91 (415)
                      .+..+...+..+.     .++++||+.|   +|.  ...++++.+++++.+ .+.......|++..|..++|+++++++.
T Consensus        12 ~~~~~~~~~~~~~-----~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~   84 (397)
T 3fsl_A           12 PILTLMERFKEDP-----RSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLF   84 (397)
T ss_dssp             HHHHHHHHHHTCC-----CSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred             chhhHHHHHhcCC-----CCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHh
Confidence            4555555444333     4678999999   443  224556999999999 8876455689988899999999999997


Q ss_pred             hhCCCCCCCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHH
Q 014936           92 RDLPYKLTPN--DVFVTSGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE  167 (415)
Q Consensus        92 ~~~~~~~~~~--~i~i~~g~~~al~~~~--~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  167 (415)
                      ...+..++++  +|++|+|+++++..++  .++.++||+|+++.|+|..+...++..|.++..+++.+++++.+|+++++
T Consensus        85 ~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  164 (397)
T 3fsl_A           85 GADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLL  164 (397)
T ss_dssp             CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHH
T ss_pred             cCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHH
Confidence            5444334688  9999999999999995  45568999999999999999999999999999998854556789999999


Q ss_pred             hhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-Cccccccc-CCCCCeEEEcc
Q 014936          168 SLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVF-GSTVPILTLGS  242 (415)
Q Consensus       168 ~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~~~i~~~s  242 (415)
                      +.++   ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+ +..+++++++|
T Consensus       165 ~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S  244 (397)
T 3fsl_A          165 ATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNS  244 (397)
T ss_dssp             HHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEE
T ss_pred             HHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEec
Confidence            9987   5678889999999999999999999999999999999999999999887632 22333333 34568999999


Q ss_pred             CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh----h-ccccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHH
Q 014936          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLL  312 (415)
Q Consensus       243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~  312 (415)
                      +||.|+++|+|+||++++..     ++++++.+..    . ...+..++.+++.++..++....     .+++++.++++
T Consensus       245 ~SK~~~~~G~riG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~  319 (397)
T 3fsl_A          245 FSKIFSLYGERVGGLSVMCE-----DAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRI  319 (397)
T ss_dssp             CTTTTTCGGGCCEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCcCCCeeEEEEecC-----CHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999986321     1234443322    1 12234567888988888887532     46678889999


Q ss_pred             HHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeC
Q 014936          313 KQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAV  389 (415)
Q Consensus       313 ~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~  389 (415)
                      +++++.+.+.|++++   ++. +..|.+|+|+|++++         . +.+..+++++||.+.||.        ||+++.
T Consensus       320 ~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~v~~g~--------Ris~~~  380 (397)
T 3fsl_A          320 LAMRQELVKVLSTEMPERNFD-YLLNQRGMFSYTGLS---------A-AQVDRLREEFGVYLIASG--------RMCVAG  380 (397)
T ss_dssp             HHHHHHHHHHHHHHCTTSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHTTCEECCTTC--------EEEGGG
T ss_pred             HHHHHHHHHHHHhcCCCCCce-eecCCceEEEecCCC---------H-HHHHHHHHhCCEEECCCC--------eEEEEe
Confidence            999999999999864   566 446888999997763         2 345667788899999874        999965


Q ss_pred             -ChhhHHHHHHHHHHH
Q 014936          390 -DPYSLEECLDRIKSF  404 (415)
Q Consensus       390 -~~~~l~~~l~~l~~~  404 (415)
                       +++++++++++|+++
T Consensus       381 ~~~~~i~~~~~~l~~~  396 (397)
T 3fsl_A          381 LNTANVQRVAKAFAAV  396 (397)
T ss_dssp             CCTTTHHHHHHHHHHH
T ss_pred             cCHhhHHHHHHHHHhh
Confidence             888999999999875

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=9.3e-45  Score=346.55  Aligned_cols=383  Identities=21%  Similarity=0.252  Sum_probs=275.8

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC----CCCCCCC
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK----FNGYAPT   76 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~y~~~   76 (415)
                      |.+|..+...... ..+...+.++.+..    .++++++|+.|.|...  ..+.+.+.+++.+.+.+..    ...|+++
T Consensus         2 m~~s~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~   74 (417)
T 3g7q_A            2 MTFSLFGDKFTRH-SGITRLMEDLNDGL----RTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGP   74 (417)
T ss_dssp             ---------------CHHHHHHHHHC---------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCT
T ss_pred             Cchhhhhhhhhcc-ccHHHHHHHHHhhc----cCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCC
Confidence            6677777766543 34555555454433    3578999999987631  1123667777777665431    2379988


Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC-----EEEEc-CCCCcchHHHHHhC------
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA-----NILLP-RPGFPIYELSAAFR------  144 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd-----~vi~~-~p~y~~~~~~~~~~------  144 (415)
                      .|.+++|+++|+++.+.+|.++++++|++|+|++++++++++++.++||     +|+++ .|+|+.+...+...      
T Consensus        75 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~  154 (417)
T 3g7q_A           75 QGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSA  154 (417)
T ss_dssp             TSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEEC
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccc
Confidence            9999999999999998888889999999999999999999999999987     89997 99999887765322      


Q ss_pred             CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC
Q 014936          145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP  224 (415)
Q Consensus       145 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~  224 (415)
                      +..+..++.+ ..++.+|++.++  ++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+... ..
T Consensus       155 ~~~~~~~~~~-~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~-~~  230 (417)
T 3g7q_A          155 RPNIELLPEG-QFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG-II  230 (417)
T ss_dssp             CCEEEEEGGG-EEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC-CB
T ss_pred             cCcccccCCc-ccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc-cc
Confidence            2333333321 114568999888  6778999999999999999999999999999999999999999999863211 11


Q ss_pred             cccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-H
Q 014936          225 FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-E  302 (415)
Q Consensus       225 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~  302 (415)
                      ..... ....++++++.|+|| ++++|+|+||+++++        ++++.+.... ..+.+++++.+.++..+++... .
T Consensus       231 ~~~~~-~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  300 (417)
T 3g7q_A          231 FSEAR-PLWNPNIILCMSLSK-LGLPGSRCGIIIAND--------KTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLL  300 (417)
T ss_dssp             CSCCC-CCCCTTEEEEEESGG-GTCTTSCCEEEECCH--------HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHH
T ss_pred             ccccc-cCCCCCEEEEEechh-ccCCCcceEEEEeCH--------HHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchH
Confidence            11111 122457899999999 599999999999864        6888877663 3345678899999999988654 2


Q ss_pred             HHHHH-HHHHHHHHHHHHHHHhhc-CCC--CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC
Q 014936          303 VFFKK-TLNLLKQSVDICYNKIKE-IPC--ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG  378 (415)
Q Consensus       303 ~~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~  378 (415)
                      .+..+ .+++++++++.+.+.|++ +++  +. +..|.+|+++|++++...    .+..++...+ .++||.+.||..|+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~~gi~v~~g~~f~  374 (417)
T 3g7q_A          301 RLSETVIKPFYYQRVQQTIAIIRRYLSEERCL-IHKPEGAIFLWLWFKDLP----ITTELLYQRL-KARGVLMVPGHYFF  374 (417)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCE-EECCCBSSEEEEECTTCS----SCHHHHHHHH-HHTTEECEEGGGGC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-eeCCCcceEEEEEcCCCC----CCHHHHHHHH-HHCCEEEECchhhC
Confidence            33344 667888888888888876 554  55 447889999999987421    2566776666 67799999999886


Q ss_pred             C---------CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936          379 L---------KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       379 ~---------~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      .         ++++||+++.+++++++++++|++++++..+
T Consensus       375 ~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~~~  415 (417)
T 3g7q_A          375 PGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIERAWR  415 (417)
T ss_dssp             TTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccccccCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHh
Confidence            4         4699999988999999999999999988765

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=3.3e-45  Score=349.91  Aligned_cols=348  Identities=16%  Similarity=0.152  Sum_probs=275.3

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHH--hcC-CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEAL--LSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~--~~~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .+++|+.|.|+.. .+++++.+++++.+.+  ... ....|+++.|.++||+++|+|+      ++++++|++|+|++++
T Consensus        33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a  105 (422)
T 3d6k_A           33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN  105 (422)
T ss_dssp             CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred             CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence            4799999997421 1455667777776553  122 3568999999999999999999      5788999999999999


Q ss_pred             H--HHHHHHhcCC------------CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEE
Q 014936          113 I--DVAMALLSRP------------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL  177 (415)
Q Consensus       113 l--~~~~~~l~~~------------gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v  177 (415)
                      +  .+++.++.++            +|+|+++.|+|+.+...++..|.+++.++.+.+   ++|++.+++.+++ +++++
T Consensus       106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v  182 (422)
T 3d6k_A          106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM  182 (422)
T ss_dssp             HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred             HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence            7  6777777655            458999999999999999999999999998642   3899999999875 67887


Q ss_pred             E-ecCCCCccccCCCHHHHHHHHHHHh-hcCcEEEEccccCC--cccCCCCcccccc----cCCCCCeEEEccCccccCC
Q 014936          178 V-IINPGNPCGNVYSYQHLQKLAETAN-KLKTLVIADEVYGH--LVFGDKPFVPMGV----FGSTVPILTLGSLSKRWIV  249 (415)
Q Consensus       178 ~-i~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~--~~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~~~  249 (415)
                      + +++||||||.++|.+++++|+++|+ ++|+++|+||+|..  +..++....++..    .+..+++++++||||. ++
T Consensus       183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~  261 (422)
T 3d6k_A          183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH  261 (422)
T ss_dssp             EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence            7 7899999999999999999999999 99999999999986  3333323334422    2345689999999998 89


Q ss_pred             CCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHHHHHhhc-
Q 014936          250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVDICYNKIKE-  325 (415)
Q Consensus       250 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-  325 (415)
                      +|+|+||+++++        ++++.+.... ..++++++++|.++..+|+...  ++++++.++.++++++.+.+.|.+ 
T Consensus       262 ~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  333 (422)
T 3d6k_A          262 AGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSR  333 (422)
T ss_dssp             TTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999864        6778777663 3346789999999999998621  367788888888899888888864 


Q ss_pred             ---CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-CCCCC-----CCCeEEEEee-CChhhHH
Q 014936          326 ---IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-GTAVG-----LKNWLRVTFA-VDPYSLE  395 (415)
Q Consensus       326 ---~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~-----~~~~iRi~~~-~~~~~l~  395 (415)
                         ++++. +..|.+|+|+|++++..      +...+ ..++.++||.+.| |..|.     ..+++||+++ .++++++
T Consensus       334 l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~-~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~  405 (422)
T 3d6k_A          334 LSEYGVAK-WTSPTGGYFISVDVVPG------TASRV-VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELE  405 (422)
T ss_dssp             HGGGTCEE-ECCCSBSSCEEEEESTT------CHHHH-HHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHH
T ss_pred             cCcCCceE-EeCCCcceEEEEECCCC------CHHHH-HHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHH
Confidence               33355 34788999999998641      34444 5566788999999 55563     2589999998 6999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRHAK  410 (415)
Q Consensus       396 ~~l~~l~~~~~~~~~  410 (415)
                      +++++|++++++...
T Consensus       406 ~~~~~l~~~l~~~~~  420 (422)
T 3d6k_A          406 VAMDGFATCVLMAAL  420 (422)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999887654

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=9e-44  Score=332.30  Aligned_cols=322  Identities=20%  Similarity=0.331  Sum_probs=265.8

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      +.+++|+.|.+.    +++++.+      .+  .....|+++ +..++|+++|+++      ++++++|++|+|+++++.
T Consensus        29 ~~~i~l~~~~~~----~~~~~~v------a~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~   89 (356)
T 1fg7_A           29 NGDVWLNANEYP----TAVEFQL------TQ--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE   89 (356)
T ss_dssp             TCSEECSSCCCS----SCCCCCC------CC--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred             CceEEeeCCCCC----CCCCHhH------hh--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence            468999999864    4445544      12  245689885 5899999999999      567899999999999999


Q ss_pred             HHHHHhcCCC-CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       115 ~~~~~l~~~g-d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .+++++.++| |+|+++.|+|+.+...++..|.++..++.+  .++.+|++++++.++ +++++++++|+||||.++|.+
T Consensus        90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~  166 (356)
T 1fg7_A           90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ  166 (356)
T ss_dssp             HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999 999999999999999999999999988875  356789999999888 889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++++|+++|+ +|+++|+||+|.++.. +   .++..+ +..++++++.|+||.|+++|+|+||+++++        +++
T Consensus       167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~  233 (356)
T 1fg7_A          167 DFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EVI  233 (356)
T ss_dssp             HHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HHH
T ss_pred             HHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH--------HHH
Confidence            9999999999 9999999999998652 1   222222 334678999999999999999999999854        678


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.+..... .++++++.|.++.++|++...+++++.+++++++++++.+.|++++++. ...|.+|+|+|++++      
T Consensus       234 ~~l~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~------  305 (356)
T 1fg7_A          234 NLLMKVIA-PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVE-QVFDSETNYILARFK------  305 (356)
T ss_dssp             HHHHHHSC-SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECCCSSSEEEEEET------
T ss_pred             HHHHHhcC-CCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EECCCCCeEEEEECC------
Confidence            88776644 3478889999999999752223388899999999999999999886543 225778899999885      


Q ss_pred             CCCHHHHHHHHHhhcCeEEEc-CCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILP-GTAVGLKNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~-g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                        +..++...+ .++||.+.| |..|+.++++||+++ +++++++++++|++
T Consensus       306 --~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~-~~~e~~~~~~~l~~  353 (356)
T 1fg7_A          306 --ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALRA  353 (356)
T ss_dssp             --THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC-CHHHHHHHHHHHHT
T ss_pred             --CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeC-CHHHHHHHHHHHHh
Confidence              356677766 678999999 888887789999997 47889999988865

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=3.1e-44  Score=338.09  Aligned_cols=325  Identities=22%  Similarity=0.391  Sum_probs=277.0

Q ss_pred             HHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH
Q 014936           60 AVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL  139 (415)
Q Consensus        60 a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~  139 (415)
                      ++.+.+.... ..|++..|..++|+++++++.     +++++++++|+|+++++.+++.++.++||+|+++.|+|+++..
T Consensus        47 ~~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~  120 (375)
T 3op7_A           47 DFYKKLQGTK-LNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD  120 (375)
T ss_dssp             HHHHHHHTSC-CSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred             HHHHHHhcCC-cCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence            4445555444 478888899999999999873     4678999999999999999999999999999999999999999


Q ss_pred             HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc
Q 014936          140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV  219 (415)
Q Consensus       140 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~  219 (415)
                      .++..|.+++.+++++++++.+|+++++++++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.
T Consensus       121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~  200 (375)
T 3op7_A          121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS  200 (375)
T ss_dssp             HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred             HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence            99999999999998766678889999999999899999999999999999999999999999999999999999999987


Q ss_pred             cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhC
Q 014936          220 FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQ  298 (415)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~  298 (415)
                      +.  +...+..  ..+++++++||||.++++|+|+||+++++        ++++.++.... .+.+++++.+.++..+++
T Consensus       201 ~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  268 (375)
T 3op7_A          201 EL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAANH--------QVTDILRDYRDYTMICAGVFDDLVAQLALA  268 (375)
T ss_dssp             SS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECCH--------HHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred             cc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeCH--------HHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence            65  2222222  24567999999999988999999999854        68888877643 345668888888888887


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC
Q 014936          299 QPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG  378 (415)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~  378 (415)
                      . .+.++++.++.++++++.+.+.|++.+++. +..|.++++.|+.++..     .+..+++..+++++||.+.||..|+
T Consensus       269 ~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~  341 (375)
T 3op7_A          269 H-YQEILERNRHILEENLAILDQWIEEEPLVS-YIRPAVVSTSFVKIAVD-----MPMEDFCLQLLQEHGVLLVPGNRFE  341 (375)
T ss_dssp             T-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECCCSSSSCEEEEECCS-----SCHHHHHHHHHHHHCEECEEGGGGT
T ss_pred             c-cHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCCeEEEeEEcCCC-----CCHHHHHHHHHHhCCEEEeChhhhC
Confidence            4 356788888999999999999999888887 44788888888887642     2567888888788899999999998


Q ss_pred             CCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          379 LKNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       379 ~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      .++++|++++.+++++++++++|.++++++.
T Consensus       342 ~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~  372 (375)
T 3op7_A          342 RDGYVRLGFACEQETLIKGLEKLSQFLRRFD  372 (375)
T ss_dssp             CTTEEEECCCSCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence            8899999998888999999999999987653

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.4e-44  Score=346.29  Aligned_cols=351  Identities=16%  Similarity=0.152  Sum_probs=280.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHH--HHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAV--AEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~--~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .....+||+.|.|+... ++.++.+.+++  .+.+...  ....|+++.|.++||++||+++      ++++++|++|+|
T Consensus        31 ~~~~~i~~~~G~p~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G  103 (427)
T 3ppl_A           31 SKNLKLDLTRGKPSSEQ-LDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDA  103 (427)
T ss_dssp             HTCCCEECCCCSCCHHH-HHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSS
T ss_pred             cCCceEecCCCCCChHH-CCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCC
Confidence            35568999999976321 22334566665  4544432  3568999899999999999999      578899999999


Q ss_pred             hHHHH--HHHHHHhcC--C----------CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-CC
Q 014936          109 CTQAI--DVAMALLSR--P----------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QN  173 (415)
Q Consensus       109 ~~~al--~~~~~~l~~--~----------gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~  173 (415)
                      +++++  ++++.++.+  +          ||+|++++|+|..+...++..|.+++.++++.+   ++|++.|+++++ ++
T Consensus       104 ~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~  180 (427)
T 3ppl_A          104 SSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQ  180 (427)
T ss_dssp             CHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTT
T ss_pred             cHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCC
Confidence            99999  588888876  6          899999999999999999999999999998643   489999999985 57


Q ss_pred             ceEEEec-CCCCccccCCCHHHHHHHHHHH-hhcCcEEEEccccCCcccCCCCcc--ccccc----CCCCCeEEEccCcc
Q 014936          174 TVALVII-NPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGDKPFV--PMGVF----GSTVPILTLGSLSK  245 (415)
Q Consensus       174 ~~~v~i~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~~~~~--~~~~~----~~~~~~i~~~s~sK  245 (415)
                      +++++++ +||||||.++|.+++++|+++| +++|+++|+||+|+.+.|.+.+..  ++..+    +..+++++++||||
T Consensus       181 ~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  260 (427)
T 3ppl_A          181 VKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSK  260 (427)
T ss_dssp             EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTT
T ss_pred             CeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhh
Confidence            7877654 7899999999999999999999 999999999999999887765432  33332    24568999999999


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHHHHHH
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVDICYNK  322 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~  322 (415)
                      . +++|+|+||+++++        ++++.+.... ....+++++.|.++..+++...  ..++++.++.++++++.+.+.
T Consensus       261 ~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~  331 (427)
T 3ppl_A          261 I-TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEI  331 (427)
T ss_dssp             T-SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9 89999999999865        6777777663 3456788999999999998622  467788888888888888888


Q ss_pred             hhc----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-CCCCC-----CCCeEEEEeeC-Ch
Q 014936          323 IKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-GTAVG-----LKNWLRVTFAV-DP  391 (415)
Q Consensus       323 l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~-----~~~~iRi~~~~-~~  391 (415)
                      |.+    ++++. +..|.+|+|+|++++..      +..++.. .+.++||.+.| |..|.     .++++||+++. ++
T Consensus       332 L~~~l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~  403 (427)
T 3ppl_A          332 LDSRLAEYGVAQ-WTVPAGGYFISLDVVPG------TASRVAE-LAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPV  403 (427)
T ss_dssp             HHHHHGGGTCCE-ECCCSBSSCEEEECSTT------CHHHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCH
T ss_pred             HHHhcCCCCceE-EeCCCccEEEEEECCcc------hHHHHHH-HHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCH
Confidence            764    33455 44788999999999742      3555554 55778999999 55554     36899999975 78


Q ss_pred             hhHHHHHHHHHHHHHHHHH
Q 014936          392 YSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       392 ~~l~~~l~~l~~~~~~~~~  410 (415)
                      +++++++++|.+++++...
T Consensus       404 ~~i~~~~~~l~~~l~~~~~  422 (427)
T 3ppl_A          404 EELEVAMDGVATCVLLAAA  422 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987654

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=3e-43  Score=329.94  Aligned_cols=336  Identities=20%  Similarity=0.299  Sum_probs=273.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      ++++++||+.|.+.    +++++.+++++.+.+..  ...|++ .+..++|+++++++      ++++++|++|+|++++
T Consensus        22 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a   88 (364)
T 1lc5_A           22 SPDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETES   88 (364)
T ss_dssp             CGGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHH
T ss_pred             CccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHH
Confidence            35679999999853    55789999999988764  357876 47899999999999      4678899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +.+++.++  +||+|+++.|+|+++...++..|.++..++.++++++.+ ++++.+.++++++++++++|+||||.++|.
T Consensus        89 l~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~  165 (364)
T 1lc5_A           89 IFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPER  165 (364)
T ss_dssp             HHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCH
Confidence            99999999  679999999999999999999999999998865334433 576666676778889999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE-eeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV-TTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~  271 (415)
                      +++++|+++|+++|+++|+||+|+.+.+++...  +...+..++++++.|+||.|+++|+|+||++ +++        ++
T Consensus       166 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------~~  235 (364)
T 1lc5_A          166 PLLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD--------AA  235 (364)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH--------HH
T ss_pred             HHHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECCH--------HH
Confidence            999999999999999999999999887653222  2223444578999999999988999999999 644        67


Q ss_pred             HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      ++.++.... +++.+++.+.++.++|+.  .+++++.+++++++++.+.+.|+++|++. + .+..|+|+|++++.    
T Consensus       236 ~~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~g~~~~~~~~~----  306 (364)
T 1lc5_A          236 MARMRRQQM-PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-V-YPGRANYLLLRCER----  306 (364)
T ss_dssp             HHHHHHHSC-TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCCSSSEEEEEESC----
T ss_pred             HHHHHHhCC-CCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCE-E-CCCCCeEEEEECCC----
Confidence            777776543 467889999999999986  46888999999999999999999888887 4 45667888888753    


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                         +..++...++ ++||.+.||..|+.  ++++||+++. .++++++++.|+++++++
T Consensus       307 ---~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~~~  360 (364)
T 1lc5_A          307 ---EDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIRS-AAQNERLLAALRNVLTGI  360 (364)
T ss_dssp             ---TTCCHHHHHH-TTTEECEECTTSTTCCTTEEEEECCC-HHHHHHHHHHHHHHC---
T ss_pred             ---cHHHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhhcc
Confidence               2334666664 56999999998753  5799999864 677888888888776654

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=4.2e-44  Score=341.48  Aligned_cols=369  Identities=14%  Similarity=0.132  Sum_probs=289.2

Q ss_pred             cCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCcHHH
Q 014936            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLS-EKFNGYAPTAGLPLT   82 (415)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~-~~~~~y~~~~g~~~l   82 (415)
                      .+....+++  .+..+.....+.     .+++++||+.|.+ +......+++.+.+++.+.+.. .....|++..|..++
T Consensus         7 ~~~~~~~~~--~~~~~~~~~~~~-----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~l   79 (412)
T 1ajs_A            7 AEVPQAQPV--LVFKLIADFRED-----PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEF   79 (412)
T ss_dssp             TTCCCCCCC--HHHHHHHHHHTC-----CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHH
T ss_pred             hhCcccCCc--hHHHHHHHHhhc-----CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHH
Confidence            344455555  666666644432     2578999999986 3322245678999999988732 244579888899999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEE--eCChHHHHHHHHH--HhcCCC-----CEEEEcCCCCcchHHHHHhCCCe-EEEee
Q 014936           83 RRAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMA--LLSRPG-----ANILLPRPGFPIYELSAAFRHIE-VRHFD  152 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~i--~~g~~~al~~~~~--~l~~~g-----d~vi~~~p~y~~~~~~~~~~g~~-~~~~~  152 (415)
                      |+++++++...++..+++++|++  |+|+++++.+++.  .++++|     |+|+++.|+|+++...++..|.+ +..++
T Consensus        80 r~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~  159 (412)
T 1ajs_A           80 RTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYR  159 (412)
T ss_dssp             HHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEE
T ss_pred             HHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEe
Confidence            99999999654554457899999  9999999999964  445789     99999999999999999999999 99998


Q ss_pred             ccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC--CCccc
Q 014936          153 LLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVP  227 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~  227 (415)
                      ..+++++.+|++++++.+++   +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++  ....+
T Consensus       160 ~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~  239 (412)
T 1ajs_A          160 YWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWA  239 (412)
T ss_dssp             CEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred             eecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchH
Confidence            75546678999999988864   56788899999999999999999999999999999999999999988764  12223


Q ss_pred             ccccC-CCCCeEEEccCccccCCCCceEEEEEe---eCCCCCCChHH----HHHHHHhhc-cccCCchhHHHHHHHHhhC
Q 014936          228 MGVFG-STVPILTLGSLSKRWIVPGWRLGWFVT---TDPCGMFRKPK----VVERMKKYF-DILGDPATFIQAAVPSILQ  298 (415)
Q Consensus       228 ~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~a~~~~l~  298 (415)
                      +..+. ..++++++.|+||.|+++|+|+||+++   ++        +    +++.+.... ..+.++++++|.++.++|+
T Consensus       240 ~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~  311 (412)
T 1ajs_A          240 IRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEP--------DSILRVLSQMQKIVRVTWSNPPAQGARIVARTLS  311 (412)
T ss_dssp             HHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSH--------HHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHH
T ss_pred             HHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCH--------HHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHc
Confidence            33332 345789999999999999999999998   33        3    444444422 2234468899999999997


Q ss_pred             CCc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeE
Q 014936          299 QPD-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVI  370 (415)
Q Consensus       299 ~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~  370 (415)
                      ...     ++++++.+++++++++.+.+.|++++   ++. +..|.+|+|+|+.++          .+++..+++++||.
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~  380 (412)
T 1ajs_A          312 DPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIY  380 (412)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEE
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-EEcCCCceEEEeCCC----------HHHHHHHHHhCCEE
Confidence            642     34778899999999999999999874   366 446788999997552          35667777888999


Q ss_pred             EEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHHHH
Q 014936          371 ILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       371 v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~  407 (415)
                      +.|+        +||+++ .+++++++++++|++++++
T Consensus       381 v~~~--------~Ris~~~~~~~~i~~~~~~l~~~l~~  410 (412)
T 1ajs_A          381 LLPS--------GRINMCGLTTKNLDYVATSIHEAVTK  410 (412)
T ss_dssp             CCTT--------SEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred             ecCC--------cEEEeeeCCHHHHHHHHHHHHHHHHh
Confidence            9874        599997 5899999999999998764

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=2.4e-44  Score=346.52  Aligned_cols=386  Identities=20%  Similarity=0.268  Sum_probs=295.4

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCccee-EecccCCCCCCCCCCcHHHHHHHHHHHhc-------CC---
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVI-SLAMGDPTVHSCFHTTHVATEAVAEALLS-------EK---   69 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-------~~---   69 (415)
                      |++|+++..+.+. ..+...+..+.+..    +.+++| +|+.|.|...  ..+.+.+++++.+.+.+       ..   
T Consensus         2 ~~~s~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (444)
T 3if2_A            2 MKFSKFGQKFTQP-TGISQLMDDLGDAL----KSDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAII   74 (444)
T ss_dssp             CCCCHHHHHHHSC-CHHHHHHHHHHHHH----HSSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHH
T ss_pred             CCcchhhhhccCc-hhHHHHHHHHHhhh----cCchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhh
Confidence            7888888777764 24555555444443    246789 9999997621  11225667777776654       21   


Q ss_pred             -CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--------------EEEEc-CCC
Q 014936           70 -FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--------------NILLP-RPG  133 (415)
Q Consensus        70 -~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd--------------~vi~~-~p~  133 (415)
                       ...|++..|.+++|+++|+|+++.+|.++++++|++|+|+++++++++.++.++||              +|+++ .|+
T Consensus        75 ~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~  154 (444)
T 3if2_A           75 SMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPE  154 (444)
T ss_dssp             HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSC
T ss_pred             hhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCC
Confidence             24799889999999999999998889889999999999999999999999998888              78775 999


Q ss_pred             CcchHHH------HHhCCCeEEEeeccCCC---CCCCChhHHHhh---cCCCceEEEecCCCCccccCCCHHHHHHHHHH
Q 014936          134 FPIYELS------AAFRHIEVRHFDLLPDK---GWEVDLDDIESL---ADQNTVALVIINPGNPCGNVYSYQHLQKLAET  201 (415)
Q Consensus       134 y~~~~~~------~~~~g~~~~~~~~~~~~---~~~~~~~~l~~~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~  201 (415)
                      |..+...      +...|..+..++.+.++   ++.+|++.|+++   ++++++++++++|+||||.++|.+++++|+++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~  234 (444)
T 3if2_A          155 YIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEI  234 (444)
T ss_dssp             CGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             ccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHH
Confidence            9988763      44567788777765321   357899999988   67789999999999999999999999999999


Q ss_pred             HhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-
Q 014936          202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-  280 (415)
Q Consensus       202 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-  280 (415)
                      |+++|+++|+||+|+.+... ....... ....+++++++|+||. +++|+|+||+++++        ++++.+..... 
T Consensus       235 a~~~~~~li~De~~~~~~~~-~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~  303 (444)
T 3if2_A          235 AKRYDIPLIIDNAYGMPFPN-IIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVADA--------KVIEAVSAMNAV  303 (444)
T ss_dssp             HHHTTCCEEEECTTCTTTTC-CBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECCH--------HHHHHHHHHHHH
T ss_pred             HHHCCCEEEEECCCCCcccc-ccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEECH--------HHHHHHHHHHHh
Confidence            99999999999999863211 1111111 1224578999999997 89999999999864        67777776633 


Q ss_pred             ccCCchhHHHHHHHHhhCCCc-HHHHHH-HHHHHHHHHHHHHHHhhc-CCC--CcCCCCCCCceEEEEecCccccCCCCC
Q 014936          281 ILGDPATFIQAAVPSILQQPD-EVFFKK-TLNLLKQSVDICYNKIKE-IPC--ISCPHKPEGSMAVMLKLNLSLLDDIID  355 (415)
Q Consensus       281 ~~~~~~~~~~~a~~~~l~~~~-~~~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~l~~~~~~~~~~  355 (415)
                      .+.+++++.+.++..+++... ..+..+ .++.++++++.+.+.|.+ +++  +. +..|.+|+++|+.++...    .+
T Consensus       304 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~  378 (444)
T 3if2_A          304 VNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLM-IHKPEGAIFLWLWFKDLP----IS  378 (444)
T ss_dssp             HHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEE-EECCCBSSEEEEEETTCS----SC
T ss_pred             ccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-EecCCccEEEEEEcCCCC----CC
Confidence            346778899999999887643 233333 667788888888888875 554  44 346888999999886411    25


Q ss_pred             HHHHHHHHHhhcCeEEEcCCCCCC----------CCeEEEEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936          356 DIDFCFKLAKEESVIILPGTAVGL----------KNWLRVTFAVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       356 ~~~~~~~ll~~~gi~v~~g~~~~~----------~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      ..++...+ .++||.+.||+.|..          .+++||+++.+++++++++++|+++++++..
T Consensus       379 ~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~  442 (444)
T 3if2_A          379 TLDLYERL-KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYD  442 (444)
T ss_dssp             HHHHHHHH-HHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHH-HHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHc
Confidence            66776665 677999999998854          2689999988999999999999999987653

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=3.2e-44  Score=342.23  Aligned_cols=374  Identities=13%  Similarity=0.114  Sum_probs=288.1

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCC
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAG   78 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~-~~~~~~~~~y~~~~g   78 (415)
                      |..+++....+++  .+......+.+.     .+++++||+.|.+ +.....++++.+++++.+ .+.......|++..|
T Consensus         2 ~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g   74 (412)
T 1yaa_A            2 ATLFNNIELLPPD--ALFGIKQRYGQD-----QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITG   74 (412)
T ss_dssp             TTTTTTCCCCCCC--TTHHHHHHHHTC-----CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTC
T ss_pred             cchhccCcccCCC--cHHHHHHHHhcC-----CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCC
Confidence            3445666666666  555555544333     2577899999986 322234577999999999 876544557988889


Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEE--eCChHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i--~~g~~~al~~~~--~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~  154 (415)
                      .+++|+++++++...+|..+++++|++  |+|+++++.+++  ..+.++||+|+++.|+|+.+...++..|.++..++..
T Consensus        75 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~  154 (412)
T 1yaa_A           75 LPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYW  154 (412)
T ss_dssp             CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECE
T ss_pred             cHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeee
Confidence            999999999999765555567899999  999999999884  3444799999999999999999999999999999872


Q ss_pred             CCCCCCCChhHHHhhcCCC---ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC--CCccccc
Q 014936          155 PDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMG  229 (415)
Q Consensus       155 ~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~  229 (415)
                      ..+++.+|++++++.++++   +.++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++  ....++.
T Consensus       155 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  234 (412)
T 1yaa_A          155 ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVR  234 (412)
T ss_dssp             ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHH
T ss_pred             cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHH
Confidence            2235779999999888653   4455569999999999999999999999999999999999999888764  1222232


Q ss_pred             ccC-CCC---CeEEEccCccccCCCCceEEEEE--e----eCCCCCCChHH----HHHHHHhh-ccccCCchhHHHHHHH
Q 014936          230 VFG-STV---PILTLGSLSKRWIVPGWRLGWFV--T----TDPCGMFRKPK----VVERMKKY-FDILGDPATFIQAAVP  294 (415)
Q Consensus       230 ~~~-~~~---~~i~~~s~sK~~~~~G~r~G~~~--~----~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~a~~  294 (415)
                      .+. ..+   ++++++|+||.|+++|+|+||++  +    ++       ++    +++.+... ...+.+++++.|.++.
T Consensus       235 ~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~-------~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~  307 (412)
T 1yaa_A          235 LGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQN-------KTIKPAVTSQLAKIIRSEVSNPPAYGAKIVA  307 (412)
T ss_dssp             HHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTH-------HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred             HHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCC-------HHHHHHHHHHHHHHHhhccCCCChHHHHHHH
Confidence            221 123   78999999999998899999998  6    12       24    66666653 2334456888999999


Q ss_pred             HhhCCCc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhh
Q 014936          295 SILQQPD-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE  366 (415)
Q Consensus       295 ~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~  366 (415)
                      ++|+...     ++++++.+++++++++.+.+.|++++   ++. +..|.+|+|+|+.++         ... +..++++
T Consensus       308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~-~~~~l~~  376 (412)
T 1yaa_A          308 KLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT---------PQM-VKRLEET  376 (412)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC---------HHH-HHHHHHH
T ss_pred             HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-eeccCceEEEeeCCC---------HHH-HHHHHHh
Confidence            9997642     35788899999999999999999874   376 446888999997552         333 4777778


Q ss_pred             cCeEEEcCCCCCCCCeEEEEeeC-ChhhHHHHHHHHHHHHHH
Q 014936          367 ESVIILPGTAVGLKNWLRVTFAV-DPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       367 ~gi~v~~g~~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~~~~  407 (415)
                      +||.+.|        ++||+++. +++++++++++|+++++.
T Consensus       377 ~gi~v~~--------~~Ris~~~~~~~~i~~~~~~l~~~~~~  410 (412)
T 1yaa_A          377 HAVYLVA--------SGRASIAGLNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             HCEECCT--------TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred             CCEEecc--------CcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence            8999876        47999974 899999999999988753

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=3.5e-43  Score=338.06  Aligned_cols=374  Identities=16%  Similarity=0.144  Sum_probs=285.2

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHH--hcCCCCCCCCCCCc
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEAL--LSEKFNGYAPTAGL   79 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~--~~~~~~~y~~~~g~   79 (415)
                      ...+....+++  ++......+..+-     .+.+|||+.|.+ +.....++.+++++++.+..  .......|.+..|.
T Consensus        24 ~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~   96 (448)
T 3meb_A           24 VFSGFPASPPD--AILNLTVLYNADT-----NPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGF   96 (448)
T ss_dssp             TTTTCCCCCCC--TTHHHHHHHHHCC-----CTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCC
T ss_pred             HHhcCCCCCCC--hHHHHHHHHHhCC-----CCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcch
Confidence            33444444444  5666665444432     345799999997 53333456788888877665  22334589888999


Q ss_pred             HHHHHHHHHHHhhhCCCC---CCCCcEEE--eCChHHHHHH--HHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeE
Q 014936           80 PLTRRAIAEYLSRDLPYK---LTPNDVFV--TSGCTQAIDV--AMALLSRPGANILLPRPGFPIYELSAA----FRHIEV  148 (415)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~---~~~~~i~i--~~g~~~al~~--~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~  148 (415)
                      +++|+++++++.   |..   +++++|++  |+|+++++.+  .+..++++||+|++++|+|..+...++    ..|.++
T Consensus        97 ~~lr~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v  173 (448)
T 3meb_A           97 PLFLEAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPY  173 (448)
T ss_dssp             HHHHHHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCC
T ss_pred             HHHHHHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeE
Confidence            999999999983   222   22689999  9999999988  455667899999999999999999999    999999


Q ss_pred             EEeeccCCC-CCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-
Q 014936          149 RHFDLLPDK-GWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-  223 (415)
Q Consensus       149 ~~~~~~~~~-~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-  223 (415)
                      +.++....+ ++.+|++.+++.+++   +++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++. 
T Consensus       174 ~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~  253 (448)
T 3meb_A          174 KEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFE  253 (448)
T ss_dssp             EEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHH
T ss_pred             EEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcc
Confidence            999984444 678999999998863   577888999999999999999999999999999999999999999887642 


Q ss_pred             -Cccccccc-CCCCCeEEEccCccccCCCCceEEEE--Ee--------eCCCCCCChHHHHHHHHhh-ccccCCchhHHH
Q 014936          224 -PFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWF--VT--------TDPCGMFRKPKVVERMKKY-FDILGDPATFIQ  290 (415)
Q Consensus       224 -~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~--~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  290 (415)
                       ...++..+ ...++++++.||||.|+++|+|+||+  ++        +++...   .++.+.+... ...+.+++.+.|
T Consensus       254 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~---~~l~~~l~~~~~~~~~~~~~~~~  330 (448)
T 3meb_A          254 ADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALS---AAMVSGMTLQIRKTWSMSAIHGA  330 (448)
T ss_dssp             HHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHH---HHHHHHHHHHHHTTTSSCCHHHH
T ss_pred             cCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHH---HHHHHHHHHHHhcccCCccHHHH
Confidence             12222222 23457899999999999999999998  65        331000   0355555543 233456788999


Q ss_pred             HHHHHhhCCCc-----HHHHHHHHHHHHHHHHHHHHHhhcC--CC------CcCCCCCCCceEEEEecCccccCCCCCHH
Q 014936          291 AAVPSILQQPD-----EVFFKKTLNLLKQSVDICYNKIKEI--PC------ISCPHKPEGSMAVMLKLNLSLLDDIIDDI  357 (415)
Q Consensus       291 ~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~--~~------~~~~~~p~~g~~~~~~l~~~~~~~~~~~~  357 (415)
                      .++..+|....     .+++++.+++++++++.+.+.|+++  ++      +. ...|.+|+|+|+.++          .
T Consensus       331 ~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~----------~  399 (448)
T 3meb_A          331 YIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWD-HILTAIGMFTFTGLT----------P  399 (448)
T ss_dssp             HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCT-HHHHCCSSEEECCCC----------H
T ss_pred             HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccc-eeCCCceEEEecCCC----------H
Confidence            99999987632     1447888899999999999999876  55      55 346889999997663          3


Q ss_pred             HHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeC-ChhhHHHHHHHHHHHHHH
Q 014936          358 DFCFKLAKEESVIILPGTAVGLKNWLRVTFAV-DPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       358 ~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~~~~  407 (415)
                      +++..+++++||.+.||+       .|||++. +++++++++++|++++++
T Consensus       400 ~~~~~ll~~~gV~v~~G~-------gRis~a~~~~~~i~~~~~~l~~~l~~  443 (448)
T 3meb_A          400 EHVDYLKEKWSIYLVKAG-------GRMSMCGLTESNCDYVAEAIHDAVTK  443 (448)
T ss_dssp             HHHHHHHHHHCEEECSGG-------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEEeCCC-------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence            567778888999999976       2999965 888899999999998873

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=8.5e-43  Score=326.55  Aligned_cols=333  Identities=18%  Similarity=0.273  Sum_probs=273.3

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      ++++++||+.|.+.    +++++.+++++.+.+..  ...|++ .+..++|+.+++++      +++++++++|+|++++
T Consensus        24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a   90 (361)
T 3ftb_A           24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKN--LGVYPD-VNYRRLNKSIENYL------KLKDIGIVLGNGASEI   90 (361)
T ss_dssp             ----CEETTCCCCT----TCSCHHHHTTHHHHHHG--GGSCCC-TTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred             CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCC-ccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence            47889999999754    66789999999998875  346765 67899999999999      5678999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +.+++.++    |+|+++.|+|+.+...++..|.+++.++.++++  .++++++++++++ ++++++++|+||||.++|.
T Consensus        91 l~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~  163 (361)
T 3ftb_A           91 IELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLINK  163 (361)
T ss_dssp             HHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred             HHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence            99999888    899999999999999999999999999986543  4678999999988 9999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++++|+++|+++|+++|+||+|+++.++ ............++++++.|+||.++++|+|+||+++.+       +++.
T Consensus       164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-------~~~~  235 (361)
T 3ftb_A          164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-------KEIA  235 (361)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-------HHHH
T ss_pred             HHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-------HHHH
Confidence            99999999999999999999999998876 333333344455678999999999999999999998433       2688


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.++.... .++++++.+.++.++|+.  .+++++.+++++++++.+.+.|+++|++.. ..+..|.|+|++++.     
T Consensus       236 ~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~-----  306 (361)
T 3ftb_A          236 AKIKAKQN-PWNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKR-VFSPHANFVLCRLEN-----  306 (361)
T ss_dssp             HHHHTTSC-TTCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEE-EECCSSSEEEEEESS-----
T ss_pred             HHHHhhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCce-ecCCCCeEEEEEcCC-----
Confidence            88877654 467889999999999985  578899999999999999999999887761 245567788888864     


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                       .+..++...+++ +||.+.||..|+.  ++++|++++ +.++++.+++.|+++.
T Consensus       307 -~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~  358 (361)
T 3ftb_A          307 -ISGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVE  358 (361)
T ss_dssp             -SCHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHH
Confidence             256777777755 5999999998864  689999997 4555566666665544

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=1e-47  Score=364.02  Aligned_cols=351  Identities=17%  Similarity=0.281  Sum_probs=292.5

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      ++++|+.|+++    +++++.+.+++.+.+... ...|++.  ..++|+++++++.+.+|..+++++|++|+|+++++.+
T Consensus        32 ~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~  104 (392)
T 3b1d_A           32 QLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI  104 (392)
Confidence            89999999864    677899999999887643 3477764  7899999999998877877889999999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC-CCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHH
Q 014936          116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       116 ~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ++.++.++||+|+++.|+|+.+...++..|.++..++.++++ +|.+|++.+++.++ ++++++++++|+||||.+++.+
T Consensus       105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~  184 (392)
T 3b1d_A          105 AIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWERE  184 (392)
Confidence            999999999999999999999999999999999888875332 46689999999887 5788899999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      ++++|+++|+++|+++|+||+|.++.+++....++..+..  .++++++.|+||.|+++|+|+||++++++       ++
T Consensus       185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~~  257 (392)
T 3b1d_A          185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------TL  257 (392)
Confidence            9999999999999999999999999887765555655543  56789999999999899999999998652       26


Q ss_pred             HHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCcc
Q 014936          272 VERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLS  348 (415)
Q Consensus       272 ~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~  348 (415)
                      ++.+.......  .+++++.|.++.++|+.. ++++++.++.++++++.+.+.|++ +|++. +..|.+++++|++++..
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~i~~~~~  335 (392)
T 3b1d_A          258 CAQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLK-VMKPQGTYLIWLDFSDY  335 (392)
Confidence            66665553322  356888898888888753 467888999999999999999987 78887 54788888889888641


Q ss_pred             ccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          349 LLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       349 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      .    .+..++...+++++||.+.||..|+.  ++++||+++.+++++++++++|+++++
T Consensus       336 ~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          336 G----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP  391 (392)
Confidence            1    13456677776678999999998873  579999998888999999999988764

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=4.5e-44  Score=342.39  Aligned_cols=352  Identities=18%  Similarity=0.250  Sum_probs=280.1

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHH--HHHhcC-CCCCC-CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVA--EALLSE-KFNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~--~~~~~~-~~~~y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .....+||+.|.|+... ++.++.+.+++.  +.+..+ ....| +++.|.++||+++|+++      ++++++|++|+|
T Consensus        23 ~~~~~i~l~~g~p~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G   95 (423)
T 3ez1_A           23 ARGLNLNMQRGQPADAD-FDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNN   95 (423)
T ss_dssp             HHTCCEESCCCCCCHHH-HHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSS
T ss_pred             cCCceEecCCCCCChHh-CCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCC
Confidence            35568999999976321 456677888875  544422 34689 88889999999999998      578899999999


Q ss_pred             hHHHHH--HHHHHhcC--C---------CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc--CCC
Q 014936          109 CTQAID--VAMALLSR--P---------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQN  173 (415)
Q Consensus       109 ~~~al~--~~~~~l~~--~---------gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~  173 (415)
                      +++++.  +++.++.+  +         ||+|+++.|+|..+...++..|.+++.++.+.+   ++|++.|++++  .++
T Consensus        96 ~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~  172 (423)
T 3ez1_A           96 SSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPS  172 (423)
T ss_dssp             CHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTT
T ss_pred             cHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCC
Confidence            999998  88888877  7         599999999999999999999999999998643   48999999998  567


Q ss_pred             ceEEEe-cCCCCccccCCCHHHHHHHHHHH-hhcCcEEEEccccCCcccCC-C--Cccccccc----CCCCCeEEEccCc
Q 014936          174 TVALVI-INPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGD-K--PFVPMGVF----GSTVPILTLGSLS  244 (415)
Q Consensus       174 ~~~v~i-~~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~-~--~~~~~~~~----~~~~~~i~~~s~s  244 (415)
                      +++|++ ++|+||||.+++.+++++|+++| +++|+++|+||+|..+.+.+ .  ...++..+    +..+++++++|||
T Consensus       173 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  252 (423)
T 3ez1_A          173 VKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTS  252 (423)
T ss_dssp             EEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEEST
T ss_pred             ceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCch
Confidence            888864 48899999999999999999999 99999999999999766554 2  22233332    3456899999999


Q ss_pred             cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCC--Cc-HHHHHHHHHHHHHHHHHHH
Q 014936          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQ--PD-EVFFKKTLNLLKQSVDICY  320 (415)
Q Consensus       245 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~~~l~  320 (415)
                      |. +++|+|+||+++++        ++++.+.... ..+.+++++.|.++..+++.  .. ..++++.++.++++++.+.
T Consensus       253 K~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~  323 (423)
T 3ez1_A          253 KI-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVD  323 (423)
T ss_dssp             TT-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hh-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence            98 79999999999865        6778777664 34567888999999988875  22 4677778888888888777


Q ss_pred             HHhhc----CC-CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-CCCCCC-----CCeEEEEeeC
Q 014936          321 NKIKE----IP-CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-GTAVGL-----KNWLRVTFAV  389 (415)
Q Consensus       321 ~~l~~----~~-~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~~-----~~~iRi~~~~  389 (415)
                      +.|.+    ++ ++. +..|.+|+|+|++++..      +... +..++.++||.+.| |..|+.     ++++||+++.
T Consensus       324 ~~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~-~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~  395 (423)
T 3ez1_A          324 EVLRAELGEGGEYAT-WTLPKGGYFISLDTAEP------VADR-VVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTR  395 (423)
T ss_dssp             HHHHHHHTTTTSSEE-ECCCSBSSCEEEEESSS------CHHH-HHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSS
T ss_pred             HHHHHhcCcCCCceE-EeCCCccEEEEEECCCC------cHHH-HHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCC
Confidence            77754    42 255 44788999999998741      3444 45556788999999 666652     5899999974


Q ss_pred             -ChhhHHHHHHHHHHHHHHHHHH
Q 014936          390 -DPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       390 -~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                       +++++++++++|++++++...+
T Consensus       396 ~~~~~i~~~~~~l~~~l~~~~~~  418 (423)
T 3ez1_A          396 PPVEEVRTAMQVVAACIRLATEE  418 (423)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHH
Confidence             8999999999999999876653

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=1.9e-43  Score=345.90  Aligned_cols=360  Identities=20%  Similarity=0.292  Sum_probs=284.1

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhh-CC-CCCC-CCcEEEeCChHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRD-LP-YKLT-PNDVFVTSGCTQ  111 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~-~~~g~~~lr~~ia~~~~~~-~~-~~~~-~~~i~i~~g~~~  111 (415)
                      .+++|+.|.|+    ++ ++.+++++.+.+...   .|+ +..|.+++|+.+++++.+. .+ ..+. +++|++|+|+++
T Consensus       104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~  175 (533)
T 3f6t_A          104 DAVNYCHTELG----LN-RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTA  175 (533)
T ss_dssp             HHHHHHHHTTC----CC-HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHH
T ss_pred             hheeccCCCCC----cC-CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHH
Confidence            57899999865    33 566666666666532   444 6689999999999999765 33 3444 479999999999


Q ss_pred             HHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC--CCCCCCChhHHHhhcCCCceEEEecCCCC
Q 014936          112 AIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVALVIINPGN  184 (415)
Q Consensus       112 al~~~~~~-----l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~i~~p~n  184 (415)
                      ++..++.+     ++++||+|+++.|+|.++...++..|.++..++++.  ++++.+|+++|++++++++++|++++|+|
T Consensus       176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~N  255 (533)
T 3f6t_A          176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTN  255 (533)
T ss_dssp             HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCT
T ss_pred             HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCC
Confidence            99999998     789999999999999999999999999999998865  56688999999999998999999999999


Q ss_pred             ccccCCCHHHHHHHHHHHh-hcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936          185 PCGNVYSYQHLQKLAETAN-KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  263 (415)
                      |||.+++.+++++|+++|+ ++|+++|+||+|+++.++..   ++.... .+++++++||||.|+++|+|+||+++++..
T Consensus       256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~  331 (533)
T 3f6t_A          256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEKN  331 (533)
T ss_dssp             TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESSC
T ss_pred             CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEecCcccCCCcccceEEEEECcHH
Confidence            9999999999999999999 68999999999998776432   232222 357899999999999999999999998642


Q ss_pred             CCCChHHHHH--------------------------------HHHhh-ccccCCchhHHHHH----HHHhhC-----CCc
Q 014936          264 GMFRKPKVVE--------------------------------RMKKY-FDILGDPATFIQAA----VPSILQ-----QPD  301 (415)
Q Consensus       264 ~~~~~~~~~~--------------------------------~~~~~-~~~~~~~~~~~~~a----~~~~l~-----~~~  301 (415)
                      ...   .+++                                .++.. ...+.+++++.|.+    +..+|.     ...
T Consensus       332 ~~~---~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~  408 (533)
T 3f6t_A          332 VFD---DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSD  408 (533)
T ss_dssp             HHH---HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTB
T ss_pred             HHH---HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccch
Confidence            000   0211                                11222 22345677778877    445564     234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccc-c-CC---------CCCHHHHHHHHHhhcCeE
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL-L-DD---------IIDDIDFCFKLAKEESVI  370 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~-~-~~---------~~~~~~~~~~ll~~~gi~  370 (415)
                      ..++++.++.++++++.+.+.|. + ++. +..|.+++|+|++++... . .+         ..++.+++..+++++||.
T Consensus       409 ~~~~~~~~~~~~~r~~~l~~~L~-~-~~~-~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~  485 (533)
T 3f6t_A          409 DPYIDIARKLVSERYDQLHDAMQ-A-PKD-ETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVV  485 (533)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT-C-CCC-CSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-ccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEE
Confidence            58899999999999999999997 6 566 457899999999885300 0 00         014567888888889999


Q ss_pred             EEcCCCCCC-CCeEEEEee-CChhhHHHHHHHHHHHHHHHHHHhh
Q 014936          371 ILPGTAVGL-KNWLRVTFA-VDPYSLEECLDRIKSFYQRHAKQLQ  413 (415)
Q Consensus       371 v~~g~~~~~-~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~~~~  413 (415)
                      +.||+.|+. ++++|++++ .+++++++++++|.++++++.++.+
T Consensus       486 v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~~~  530 (533)
T 3f6t_A          486 LVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYEEFK  530 (533)
T ss_dssp             SCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999886 689999997 6899999999999999998877643

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=2.9e-43  Score=333.93  Aligned_cols=349  Identities=18%  Similarity=0.176  Sum_probs=270.2

Q ss_pred             CcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE--eCChH
Q 014936           34 EKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCT  110 (415)
Q Consensus        34 ~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i--~~g~~  110 (415)
                      +++++||+.|.+ +.....++++.+++++.+.+.......|++..|..++|+++++++....+..+++++|++  |+|++
T Consensus        25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~  104 (396)
T 2q7w_A           25 RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGT  104 (396)
T ss_dssp             ---CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred             CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccch
Confidence            467899999983 222224667999999988876544558988889999999999999653332245889998  99999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCc
Q 014936          111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNP  185 (415)
Q Consensus       111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~np  185 (415)
                      +++++++.++.  ++||+|+++.|+|+.+...++..|.++..++.++++++.+|++++++.+++   +++++++++|+||
T Consensus       105 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~np  184 (396)
T 2q7w_A          105 GALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNP  184 (396)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred             hhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence            99999987763  699999999999999999999999999999886545678999999998864   3677888999999


Q ss_pred             cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCC-CCcccccccCC-CCCeEEEccCccccCCCCceEEEEEe--eC
Q 014936          186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVT--TD  261 (415)
Q Consensus       186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~--~~  261 (415)
                      ||.+++.+++++|+++|+++|+++|+||+|..+.+++ ....++..+.. .+++++++|+||.|+++|+|+||+++  ++
T Consensus       185 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~  264 (396)
T 2q7w_A          185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAAD  264 (396)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSS
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCC
Confidence            9999999999999999999999999999999988753 12223333322 35789999999999989999999996  33


Q ss_pred             CCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCC
Q 014936          262 PCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCP  332 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~  332 (415)
                      +...   .++.+.+.... ..+.+++++++.++.++|+...     ++++++.+++++++++.+.+.|++++   ++. +
T Consensus       265 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~  340 (396)
T 2q7w_A          265 SETV---DRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFS-F  340 (396)
T ss_dssp             HHHH---HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCT-H
T ss_pred             HHHH---HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-e
Confidence            1000   02444444322 2234568889999999997631     35778888999999999999999873   366 4


Q ss_pred             CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeC-ChhhHHHHHHHHHHH
Q 014936          333 HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAV-DPYSLEECLDRIKSF  404 (415)
Q Consensus       333 ~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~l~~~l~~l~~~  404 (415)
                      ..|.+|+|+|++++         . +++..+++++||.+.||        +||+++. +++++++++++|+++
T Consensus       341 ~~~~~~~~~~~~~~---------~-~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~~  395 (396)
T 2q7w_A          341 IIKQNGMFSFSGLT---------K-EQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVAV  395 (396)
T ss_dssp             HHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHH
T ss_pred             ecCCCceEEEecCC---------H-HHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHhc
Confidence            46788999997653         2 45667777889999874        5999974 899999999999875

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=1.8e-42  Score=338.93  Aligned_cols=351  Identities=16%  Similarity=0.258  Sum_probs=273.6

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHh-hhCCCCC---CCCcEEEeCChHHH
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS-RDLPYKL---TPNDVFVTSGCTQA  112 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~-~~~~~~~---~~~~i~i~~g~~~a  112 (415)
                      +++|+.|.|.    + +++.+.+++.+.+.   ...|+++.|..++|+++++++. +..+.++   ++++|++|+|++++
T Consensus       106 ~i~l~~g~~~----~-~~~~~~~al~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~ea  177 (546)
T 2zy4_A          106 SLSYVRDQLG----L-DPAAFLHEMVDGIL---GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAA  177 (546)
T ss_dssp             HHHHHHHTSC----C-CHHHHHHHHHHHHH---TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHH
T ss_pred             hhecccCCCC----C-CChHHHHHHHHhhh---cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHH
Confidence            7899999864    3 34667777777664   2479998899999999887664 4443322   46899999999999


Q ss_pred             HHHHHHH-----hcCCCCEEEEcCCCCcchHHHHHh--CCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936          113 IDVAMAL-----LSRPGANILLPRPGFPIYELSAAF--RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP  185 (415)
Q Consensus       113 l~~~~~~-----l~~~gd~vi~~~p~y~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np  185 (415)
                      +..++.+     ++++||+|++++|+|+.+...+..  .|++++.++.+++++|.+|++.|++.++++++++++++|+||
T Consensus       178 l~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NP  257 (546)
T 2zy4_A          178 MAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNP  257 (546)
T ss_dssp             HHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSS
T ss_pred             HHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCC
Confidence            9999988     578999999999999999987654  468888898877777889999999988888999999999999


Q ss_pred             cccCCCHHHHHHHHHHH--hhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936          186 CGNVYSYQHLQKLAETA--NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (415)
Q Consensus       186 tG~~~~~~~l~~i~~~~--~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  263 (415)
                      ||.+++.+++++|+++|  +++|+++|+||+|+.+.++   ..++.... .++++++.||||.|+++|+|+||++++++.
T Consensus       258 tG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~  333 (546)
T 2zy4_A          258 PSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTLLVYSFSKYFGATGWRLGVVAAHQQN  333 (546)
T ss_dssp             SCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEEEEEESTTTTTCGGGCEEEEEEESSC
T ss_pred             CCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEEEEEeCccccCCCCcceEEEEECCHH
Confidence            99999999999999999  8899999999999988753   22333332 257899999999999999999999997631


Q ss_pred             CCCChHHHHHHHHhh-------------------------------------ccccCCchhHHHHHH-----HHhhCCCc
Q 014936          264 GMFRKPKVVERMKKY-------------------------------------FDILGDPATFIQAAV-----PSILQQPD  301 (415)
Q Consensus       264 ~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~a~-----~~~l~~~~  301 (415)
                             +++.+...                                     ...+.+.+.+.|.++     .+++++ .
T Consensus       334 -------l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~-~  405 (546)
T 2zy4_A          334 -------VFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDE-A  405 (546)
T ss_dssp             -------HHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCT-T
T ss_pred             -------HHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhc-c
Confidence                   44444210                                     012245677777663     345553 2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcc---ccC---------CCCCHHHHHHHHHhhcCe
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLS---LLD---------DIIDDIDFCFKLAKEESV  369 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~---~~~---------~~~~~~~~~~~ll~~~gi  369 (415)
                      +.+.++.++.++++++.+.+.|. + ++. +..|.+++|+|++++.-   ..+         +. ++.+++.+++.++||
T Consensus       406 ~~~~~~~r~~~~~r~~~l~~~L~-~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~-~~~~~l~~ll~~~gV  481 (546)
T 2zy4_A          406 DEYKHTLKQLIRRRETTLYRELG-M-PPL-RDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQS-STGDMLFRIADETGI  481 (546)
T ss_dssp             CHHHHHHHHHHHHHHHHHHGGGT-S-SCC-CCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHC-CHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-cCCCCeeEEEEEEHHHhhcccccHHHHHHhhccC-CHHHHHHHHHHHCCE
Confidence            47888999999999999999986 4 344 33678899999987520   000         01 345667778888999


Q ss_pred             EEEcCCCCCC-CCeEEEEeeC-ChhhHHHHHHHHHHHHHHHHHH
Q 014936          370 IILPGTAVGL-KNWLRVTFAV-DPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       370 ~v~~g~~~~~-~~~iRi~~~~-~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                      .+.||..|+. ++++||+++. +++++++++++|+++++++.++
T Consensus       482 ~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~~  525 (546)
T 2zy4_A          482 VLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELYAE  525 (546)
T ss_dssp             CCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999976 5789999975 8899999999999998877654

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=2.8e-43  Score=335.40  Aligned_cols=363  Identities=17%  Similarity=0.161  Sum_probs=270.5

Q ss_pred             cCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHH
Q 014936            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (415)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr   83 (415)
                      .+....+++  ++......+.++.     .++++||+.|+| +    ++.++.+.+++.++.. .....|++..|.+++|
T Consensus        18 ~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~d----~~~~~~v~~a~~~a~~-~~~~~y~~~~g~~~lr   85 (409)
T 4eu1_A           18 GPGSMGKPD--PILGLGQDFRMDP-----AKRKVNLSIGVYRD----DADQPFVLECVKQATL-GTNMDYAPVTGIASFV   85 (409)
T ss_dssp             -----------CHHHHHHHHHHCC-----CSSCEECCCSSCCC----TTSCCCCCHHHHTCCC-CSCCCCCCTTCCHHHH
T ss_pred             hcCCCCCCC--hHHHHHHHHhhCC-----CcCceeeeeeEEEC----CCCCEeecHHHHhcCc-cccccCCCCCCcHHHH
Confidence            344445555  4555555444443     467899999996 4    3344455666665532 3446898889999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEE--EeCChHHHHHHHH---HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936           84 RAIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAM---ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (415)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~~i~--i~~g~~~al~~~~---~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  158 (415)
                      +++++++....+..+++++|.  .+.|+++++..+.   .++.++||+|+++.|+|..+...++..|.+++.++...+++
T Consensus        86 ~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  165 (409)
T 4eu1_A           86 EEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPAT  165 (409)
T ss_dssp             HHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTT
T ss_pred             HHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcC
Confidence            999999842111112267884  5999999988754   44568999999999999999999999999999999865567


Q ss_pred             CCCChhHHHhhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC--Cccccccc-C
Q 014936          159 WEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVF-G  232 (415)
Q Consensus       159 ~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~  232 (415)
                      +.+|++++++.++   +.++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.  ...++..+ +
T Consensus       166 ~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~  245 (409)
T 4eu1_A          166 KGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVD  245 (409)
T ss_dssp             TEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHT
T ss_pred             CcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHh
Confidence            8899999999885   3456667799999999999999999999999999999999999999887652  11222222 3


Q ss_pred             CCCCeEEEccCccccCCCCceEEEE--EeeCCCCCCChHH----HHHHHHhhc-cccCCchhHHHHHHHHhhCCCc----
Q 014936          233 STVPILTLGSLSKRWIVPGWRLGWF--VTTDPCGMFRKPK----VVERMKKYF-DILGDPATFIQAAVPSILQQPD----  301 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~----  301 (415)
                      ..+++++++||||.|+++|+|+||+  ++++       ++    +.+.++... ..+.+++++.|.++..+|+...    
T Consensus       246 ~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  318 (409)
T 4eu1_A          246 MVPNLIVAQSFSKNFGLYGHRCGALHISTAS-------AEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTAL  318 (409)
T ss_dssp             TSSCCEEEEECTTTSSCGGGCCEEEEEECSS-------HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHH
T ss_pred             hCCcEEEEecCcccccCccCCceEEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHH
Confidence            4567899999999999999999997  5544       24    555555542 3345677889999998887632    


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHhhcCC--C-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC
Q 014936          302 -EVFFKKTLNLLKQSVDICYNKIKEIP--C-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       302 -~~~~~~~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~  377 (415)
                       .+++++.+++++++++.+.+.|++++  + +. +..|.+|+|+|+.++          .+++..+++++||.+.||   
T Consensus       319 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gv~v~p~---  384 (409)
T 4eu1_A          319 WKKELKQMSSRIAEVRKRLVSELKACGSVHDWS-HIERQVGMMAYTGLT----------REQVELLRSEYHIYMTLN---  384 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTT---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-eecCCceEEEEeCCC----------HHHHHHHHHcCCEEEcCC---
Confidence             34577888999999999999999872  1 55 446889999996553          355778888889999986   


Q ss_pred             CCCCeEEEEee-CChhhHHHHHHHHHHHH
Q 014936          378 GLKNWLRVTFA-VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       378 ~~~~~iRi~~~-~~~~~l~~~l~~l~~~~  405 (415)
                           .||+++ .++++++.++++|++++
T Consensus       385 -----~Ri~~~~~~~~~i~~~~~~l~~~l  408 (409)
T 4eu1_A          385 -----GRAAVSGLNSTNVEYVSQAIHNVT  408 (409)
T ss_dssp             -----CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             -----CEEEEEecCHhhHHHHHHHHHHHh
Confidence                 399995 67888999999998765

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=2.6e-41  Score=317.36  Aligned_cols=331  Identities=18%  Similarity=0.232  Sum_probs=273.7

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      .+||+.|.+.    +++++.+.+++.+.+...  ....|++..+ .++|+++++++++.+|.++++++|++|+|+++++.
T Consensus        32 ~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~  106 (369)
T 3cq5_A           32 DIRLNTNENP----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ  106 (369)
T ss_dssp             SEECSSCCCC----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred             ceeccCCCCC----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence            4899999863    667899999999887642  2457877655 89999999999888887888999999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHH
Q 014936          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .++.++.++||+|+++.|+|+++...++..|.++..++.+  +++.+|++++++.+++ +++++++++|+||||.++|.+
T Consensus       107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~  184 (369)
T 3cq5_A          107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD  184 (369)
T ss_dssp             HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999999999999999999864  4467899999998876 788999999999999999988


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC-CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV-PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++.+|++.|   ++++|+||+|+.+.++   ...+...+..+ +++++.|+||.++++|+|+||+++++        +++
T Consensus       185 ~l~~l~~~~---~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~  250 (369)
T 3cq5_A          185 DVERIINVA---PGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI  250 (369)
T ss_dssp             HHHHHHHHC---SSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred             HHHHHHHhC---CCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence            888888765   4999999999987753   11122223334 78999999999988999999999975        677


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.+..... .++++++.+.++.++|+.  .+++++.+++++++++.+.+.|++. ++. + .|..|+|+|++++.     
T Consensus       251 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~-----  319 (369)
T 3cq5_A          251 DAVMLVRL-PYHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEEL-GYA-V-VPSESNFVFFGDFS-----  319 (369)
T ss_dssp             HHHHTTSC-TTCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHH-TCE-E-ECCSSSEEEEECCS-----
T ss_pred             HHHHHcCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCC-----
Confidence            87776544 356888999999999975  4678889999999999999999885 777 4 36667889988751     


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                        +..++...+ .++||.+.||   +.++++|++++ ++++++.+++.|+++++
T Consensus       320 --~~~~l~~~l-~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~  366 (369)
T 3cq5_A          320 --DQHAAWQAF-LDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIK  366 (369)
T ss_dssp             --SHHHHHHHH-HHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred             --CHHHHHHHH-HHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence              456676666 5779999998   33689999998 78899999999988764

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=5.8e-42  Score=319.54  Aligned_cols=326  Identities=16%  Similarity=0.219  Sum_probs=263.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .+++++||+.|.+.    +++++.+++++.+.+.  ....|+++.+ .++|+++|+++      ++++++|++|+|++++
T Consensus        13 ~g~~~id~~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~a   79 (350)
T 3fkd_A           13 LSSEIVNFSTTVWT----DGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAA   79 (350)
T ss_dssp             ---CCEECSCCSCC----CSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHH
T ss_pred             ccccEEEccCCCCC----CCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence            36889999999864    6678999999998873  3457888766 89999999998      5688999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeec-cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      +.+++.++.  ||+|+++.|+|..+...++..|++++.++. +..++  +++        ++++++++++|+||||.+++
T Consensus        80 l~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~  147 (350)
T 3fkd_A           80 FYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQ  147 (350)
T ss_dssp             HHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCC
Confidence            999999997  999999999999999999999999999987 43233  333        47889999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      .+++.+|+++|+++  ++|+||+|+.+.+.+...  ...++..+++++++|+||.++++|+|+||+++++        ++
T Consensus       148 ~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--------~~  215 (350)
T 3fkd_A          148 RTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--------DF  215 (350)
T ss_dssp             HHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--------HH
T ss_pred             HHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeCH--------HH
Confidence            99999999999865  999999999987665432  2344556788999999999999999999999854        68


Q ss_pred             HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      ++.+..... .++++++.+.++..+|+... .+.++..+.. ++++.+.+.|+++|++. + .|..+.|+|++++..   
T Consensus       216 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~~---  287 (350)
T 3fkd_A          216 MKRVAAFST-PWAVNALAIEAAKFILIHPA-QFTLPIRKWQ-RNTVDFITALNRLDGVE-V-HPSGTTFFLLRLKKG---  287 (350)
T ss_dssp             HHHHHTTCC-TTCSCHHHHHHHHHHHHCTT-TTCCCHHHHH-HHHHHHHHHHHHSTTEE-E-CCCSSSEEEEEESSS---
T ss_pred             HHHHHHhCC-CCCCCHHHHHHHHHHHhCHH-HHHHHHHHHH-HHHHHHHHHHhcCCCcE-E-CCCCCcEEEEECCCC---
Confidence            888877654 46788999999999987642 2333343333 88889999999888888 4 566788888888741   


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                         +..++...+++++||.+.||..|+.  ++++||+++ ++++++.+++.|+++.++
T Consensus       288 ---~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~  341 (350)
T 3fkd_A          288 ---TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEK  341 (350)
T ss_dssp             ---CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC
T ss_pred             ---CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHH
Confidence               4677888776658999999998875  689999997 566777777777776654

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=2.3e-42  Score=327.49  Aligned_cols=365  Identities=15%  Similarity=0.157  Sum_probs=277.2

Q ss_pred             ccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHH
Q 014936            8 IDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAI   86 (415)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~i   86 (415)
                      ...+++  .+........+..     +++++||+.|.+. .....++++.+++++.+.+.......|++..|..++|+++
T Consensus         6 ~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~l   78 (394)
T 2ay1_A            6 KPQAPD--KILALMGEFRADP-----RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAM   78 (394)
T ss_dssp             CCCCCC--SHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHH
T ss_pred             ccCCCc--cHHHHHHHHHhCC-----CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHH
Confidence            344455  5555555444332     5678999999852 1222467899999999887654456898888999999999


Q ss_pred             HHHHhhhCCCCCCCCcEEE--eCChHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936           87 AEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (415)
Q Consensus        87 a~~~~~~~~~~~~~~~i~i--~~g~~~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  162 (415)
                      ++++..   .++++++|++  |+|+++++++++.++..  +||+|+++.|+|+.+...++..|.++..++.++++++.+|
T Consensus        79 a~~~~~---~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  155 (394)
T 2ay1_A           79 GELILG---DGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVD  155 (394)
T ss_dssp             HHHHHG---GGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEEC
T ss_pred             HHHHhC---CCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccC
Confidence            999842   1236789999  99999999999988754  8999999999999999999999999999988654567899


Q ss_pred             hhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC-CcccccccC-CCCCe
Q 014936          163 LDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG-STVPI  237 (415)
Q Consensus       163 ~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-~~~~~  237 (415)
                      ++++++.+++   .++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++. ...++..+. ..+++
T Consensus       156 ~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (394)
T 2ay1_A          156 FEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEV  235 (394)
T ss_dssp             HHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSE
T ss_pred             HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCE
Confidence            9999998864   356777899999999999999999999999999999999999999876531 112232222 13468


Q ss_pred             EEEccCccccCCCCceEEEEEe--eCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCc-----HHHHHHHH
Q 014936          238 LTLGSLSKRWIVPGWRLGWFVT--TDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPD-----EVFFKKTL  309 (415)
Q Consensus       238 i~~~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~  309 (415)
                      ++++|+||.|+++|+|+||+++  +++..+   ..+.+.+... ...+.+++++.+.++.++|+...     .+++++.+
T Consensus       236 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~  312 (394)
T 2ay1_A          236 LIAASCSKNFGIYRERTGCLLALCADAATR---ELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVR  312 (394)
T ss_dssp             EEEEECTTTTTCGGGCEEEEEEECSSHHHH---HHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             EEEEeccCCCcCcCCccceEEEEeCCHHHH---HHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence            9999999999889999999997  331100   0123333322 12234458889999999887631     35788889


Q ss_pred             HHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEE
Q 014936          310 NLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT  386 (415)
Q Consensus       310 ~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~  386 (415)
                      ++++++++.+.+.|++++   ++. +..|.+|+|+|++++         . +.+..+++++||.+.||        +||+
T Consensus       313 ~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gi~v~~~--------~Ris  373 (394)
T 2ay1_A          313 SGMLRLREQLAGELRDLSGSDRFG-FVAEHRGMFSRLGAT---------P-EQVKRIKEEFGIYMVGD--------SRIN  373 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSTTT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEE
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCee-EEcCCceEEEeeCCC---------H-HHHHHHHHhCCEEecCC--------CeEE
Confidence            999999999999998763   366 436788999997663         2 34566777889999874        5999


Q ss_pred             ee-CChhhHHHHHHHHHHH
Q 014936          387 FA-VDPYSLEECLDRIKSF  404 (415)
Q Consensus       387 ~~-~~~~~l~~~l~~l~~~  404 (415)
                      ++ .+++++++++++|+++
T Consensus       374 ~~~~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          374 IAGLNDNTIPILARAIIEV  392 (394)
T ss_dssp             GGGCCTTTHHHHHHHHHHH
T ss_pred             eecCCHhhHHHHHHHHHHc
Confidence            96 5899999999999875

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.7e-40  Score=308.00  Aligned_cols=321  Identities=17%  Similarity=0.229  Sum_probs=260.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      ..+.+|+|+.+.+.    +++++.+++++.+.+..  ...|++ .+..++|+++|+++      ++++++|++|+|++++
T Consensus        14 ~~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~   80 (337)
T 3p1t_A           14 AAAQAVCLAFNENP----EAVEPRVQAAIAAAAAR--INRYPF-DAEPRVMRKLAEHF------SCPEDNLMLVRGIDEC   80 (337)
T ss_dssp             CCCCCEECSSCCCC----SCCCHHHHHHHHHHGGG--TTSCCT-THHHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred             CCCCceEeeCCCCC----CCCCHHHHHHHHHhhhh--hccCCC-CchHHHHHHHHHHh------CcCHHHEEEeCCHHHH
Confidence            46678999999743    67889999999998764  457865 68999999999998      5678899999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +.+++.++  +||+|+++.|+|..+...++..|++++.++.+  .++.+|++++++.  .+++++++++|+||||.++|.
T Consensus        81 l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~  154 (337)
T 3p1t_A           81 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSA  154 (337)
T ss_dssp             HHHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCH
Confidence            99999988  89999999999999999999999999999875  3567999999987  467899999999999999998


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++.+|++   .+++ +|+||+|+.+...+..  .   ....+++++++|+||.|+++|+|+||+++++        +++
T Consensus       155 ~~l~~l~~---~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~  217 (337)
T 3p1t_A          155 GELDQLRQ---RAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--------ELI  217 (337)
T ss_dssp             HHHHHHHH---HCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--------HHH
T ss_pred             HHHHHHHH---hCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeCH--------HHH
Confidence            88777765   5665 6669999986643321  1   2234568999999999999999999999865        677


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD  352 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~  352 (415)
                      +.+..... .++.+++.+.++..+|+.  ..++++..+++.++++.+.+.|+++ ++. + .+..+.|+|+..+      
T Consensus       218 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~------  285 (337)
T 3p1t_A          218 AAMKRKQW-FCNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYR-V-ASSEANFVLVENA------  285 (337)
T ss_dssp             HHHHTTSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-B-CCCSSSEEEEECT------
T ss_pred             HHHHhhcC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCE-E-CCCCCeEEEEEcC------
Confidence            87776543 467788899999999975  3456777788888899999999988 777 4 3445567776664      


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                        +..++ ..+|.++||.+.||..|+.++++||+++ ++++++.+++.|+++.
T Consensus       286 --~~~~~-~~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~  334 (337)
T 3p1t_A          286 --AGERT-LRFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYS  334 (337)
T ss_dssp             --TTHHH-HHHHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred             --CHHHH-HHHHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHh
Confidence              23344 4455778999999999988899999998 5788888888887764

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=1.2e-40  Score=311.83  Aligned_cols=329  Identities=15%  Similarity=0.256  Sum_probs=267.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +++.+++|+.|++.    +++++.+++++.+.+...  ....|++. +..++|+++++++      ++++++|++|+|++
T Consensus        24 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~   92 (360)
T 3hdo_A           24 DIASWIKLNTNENP----YPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSD   92 (360)
T ss_dssp             CCTTSEECSSCCCS----SCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHH
T ss_pred             cccceeeccCCCCC----CCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHH
Confidence            35679999999864    778999999999988764  14578764 6799999999999      46789999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCC
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY  190 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~  190 (415)
                      +++..++.++.++||+|+++.|+|.++...++..|.++..++.+.  ++.+  +++++.+  +++++++++|+||||.++
T Consensus        93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~  166 (360)
T 3hdo_A           93 EVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSF  166 (360)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCc
Confidence            999999999999999999999999999999999999999998743  3334  5555444  356899999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                      +.+++.+|   |+++|+++|+||+|+.+.  +.....  ..+..++++++.|+||.|+++|+|+||+++++        +
T Consensus       167 ~~~~l~~l---~~~~~~~li~De~~~~~~--~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~  231 (360)
T 3hdo_A          167 PLEYIDEL---ARRCAGMLVLDETYAEFA--ESNALE--LVRRHENVVVTRTLSKSYSLAGMRIGLAIARP--------E  231 (360)
T ss_dssp             CHHHHHHH---HHHBSSEEEEECTTGGGS--SCCCTH--HHHHCSSEEEEEESTTTTSCTTSCCEEEECCH--------H
T ss_pred             CHHHHHHH---HHHCCCEEEEECChHhhC--CcchhH--HhccCCCEEEEecchHhhcCCccceeeEeeCH--------H
Confidence            98766555   557899999999999863  332222  22334678999999999999999999999854        6


Q ss_pred             HHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      +++.+..... .++.+++.+.++.++|+.  .+++++.+++++++++.+.+.|+++ ++. + .+..+.|+|+.++.   
T Consensus       232 ~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~~~~~~---  302 (360)
T 3hdo_A          232 VIAALDKIRD-HYNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYD-V-IPSQGNYLFATPPD---  302 (360)
T ss_dssp             HHHHHHHHSC-SCCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECTT---
T ss_pred             HHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-cCCCccEEEEECCC---
Confidence            8888877654 467899999999999986  5778999999999999999999988 777 4 46677888887753   


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                         .+..++...+ .++||.+.|+..++.++++||+++ ++++++.+++.|+++.+.
T Consensus       303 ---~~~~~l~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~  354 (360)
T 3hdo_A          303 ---RDGKRVYDGL-YARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEG  354 (360)
T ss_dssp             ---CCHHHHHHHH-HHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC-
T ss_pred             ---CCHHHHHHHH-HHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhcc
Confidence               2456666655 567999999887666789999998 788999999998887654

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=2.2e-43  Score=333.40  Aligned_cols=331  Identities=19%  Similarity=0.205  Sum_probs=254.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHh-c--CCCCCCCCCCCc-----HHHHHHHHHHHhhhCCCCCCC-CcE
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL-S--EKFNGYAPTAGL-----PLTRRAIAEYLSRDLPYKLTP-NDV  103 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~-~--~~~~~y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~-~~i  103 (415)
                      .++++++|+.|.|+    ++.++.+.+++.+... .  .....|+++.|.     ++||+++|+|++ .+|..+.+ ++|
T Consensus        20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i   94 (391)
T 3bwn_A           20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI   94 (391)
T ss_dssp             TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred             CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence            46778999999975    4445556555533221 1  134579998998     999999999998 45767777 599


Q ss_pred             EEeCChHHHHHHHHHHhcCCCC----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEe
Q 014936          104 FVTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI  179 (415)
Q Consensus       104 ~i~~g~~~al~~~~~~l~~~gd----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i  179 (415)
                      ++|+|+++++.+++.+++++||    +|++++|+|..+...++..|+++..++++.+ +  +.        .++++++++
T Consensus        95 ~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l  163 (391)
T 3bwn_A           95 VVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELV  163 (391)
T ss_dssp             EEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEE
T ss_pred             EEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEE
Confidence            9999999999999999999999    9999999999999999999999988887532 2  22        246889999


Q ss_pred             cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      ++||||||.+++     +|++.++.+++++|+||+|..    + ...++..  ..+++++++||||.|+++|+|+||+++
T Consensus       164 ~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~  231 (391)
T 3bwn_A          164 TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALV  231 (391)
T ss_dssp             ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred             CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEe
Confidence            999999999986     354422333499999999974    1 1223322  345789999999999999999999997


Q ss_pred             eCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCc---------HHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936          260 TDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPD---------EVFFKKTLNLLKQSVDICYNKIKEIPCI  329 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~l~~~~~~  329 (415)
                      ++       +++++.+..... ...+++.+.|.++..+|+...         +.++++.++.++++++.+.+.|+++|++
T Consensus       232 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  304 (391)
T 3bwn_A          232 KD-------KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF  304 (391)
T ss_dssp             CC-------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred             cC-------HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            32       257777776643 346788999999999987531         3578899999999999999999988766


Q ss_pred             cCCCC-------------CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEeeCChhhHH
Q 014936          330 SCPHK-------------PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFAVDPYSLE  395 (415)
Q Consensus       330 ~~~~~-------------p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~l~  395 (415)
                      . +..             |.+|+|+|++++.        . +.+..+++++||.+.||+.|+. ++++|||++.++++++
T Consensus       305 ~-~~~p~~~~~~f~~~~~~~~g~~~~~~~~~--------~-~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~  374 (391)
T 3bwn_A          305 T-LPKYPEAFCNYFGKSLESYPAFAWLGTKE--------E-TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFN  374 (391)
T ss_dssp             E-CCCCCCEEETTTTEEECCCCSEEEEEESS--------S-CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHH
T ss_pred             c-cccCCccccccccccCCCcceEEEecCCc--------H-HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHH
Confidence            5 323             3456689998863        1 2455667788999999999986 6899999988899999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRH  408 (415)
Q Consensus       396 ~~l~~l~~~~~~~  408 (415)
                      +++++|++++++.
T Consensus       375 ~~~~~L~~~~~~~  387 (391)
T 3bwn_A          375 VFLERLANMKLIK  387 (391)
T ss_dssp             HHHHHHHSCC---
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999887653

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=2.2e-41  Score=319.23  Aligned_cols=376  Identities=13%  Similarity=0.068  Sum_probs=271.7

Q ss_pred             CccccCCccCCcc-hhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 014936            1 MEISNGGIDNTGS-IITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAG   78 (415)
Q Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g   78 (415)
                      |+.+.|....+.. ..+|..+...+.++      +.+.|||+.|.. +.....++.+.|++|.+..++.+....|.+..|
T Consensus        15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d------~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G   88 (420)
T 4h51_A           15 MTTAERWQKIQAQAPDVIFDLAKRAAAA------KGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISG   88 (420)
T ss_dssp             CCHHHHHHTCCCCCCCHHHHHHHHHHHC------CSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTC
T ss_pred             hhhhHHHhCCCCCCCChHHHHHHHHhcC------CCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCC
Confidence            4444444444333 23666666654443      335899999942 111224566899999888877665557999999


Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCc--EEEeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcchHHHHHhCCCe-EEEe
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALL----SRPGANILLPRPGFPIYELSAAFRHIE-VRHF  151 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~--i~i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~~~~~~~~~g~~-~~~~  151 (415)
                      .++||+++++++..   -....+.  .+-|.|+|.|+..++..+    .++||+|++++|+|++|...++..|.+ +..+
T Consensus        89 ~p~lr~aia~~~~g---~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~  165 (420)
T 4h51_A           89 YQPFIDEAVKIIYG---NTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTY  165 (420)
T ss_dssp             CHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEE
T ss_pred             hHHHHHHHHHHhcC---CCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEee
Confidence            99999999999842   2223333  345888888887766654    479999999999999999999999987 4555


Q ss_pred             eccCCCCCCCChhHHHhhc---CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc
Q 014936          152 DLLPDKGWEVDLDDIESLA---DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM  228 (415)
Q Consensus       152 ~~~~~~~~~~~~~~l~~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~  228 (415)
                      +....+.+.+|.+.+.+.+   .++++++++++||||||.+++.+++++|+++|+++++++|+|++|.++.+++......
T Consensus       166 ~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~  245 (420)
T 4h51_A          166 AYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAY  245 (420)
T ss_dssp             ECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTH
T ss_pred             ccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchH
Confidence            5544455677888877655   3567788889999999999999999999999999999999999999998765332221


Q ss_pred             ---cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH----HHHhh-ccccCCchhHHHHHHHHhhCCC
Q 014936          229 ---GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE----RMKKY-FDILGDPATFIQAAVPSILQQP  300 (415)
Q Consensus       229 ---~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~a~~~~l~~~  300 (415)
                         ......++++++.||||.|+++|+|+||++++...     .+...    .+... .....+++...|.++..++.+.
T Consensus       246 ~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~-----~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~  320 (420)
T 4h51_A          246 AARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKD-----KTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNN  320 (420)
T ss_dssp             HHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSC-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSH
T ss_pred             HHHhHHhhCceEEEEeccccccccccCceEEEEecccC-----HHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCH
Confidence               11233457899999999999999999999887532     12222    22222 2234677888898888888763


Q ss_pred             c-----HHHHHHHHHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936          301 D-----EVFFKKTLNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL  372 (415)
Q Consensus       301 ~-----~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~  372 (415)
                      .     +..++.++++++++|+.+.+.|+++.   .+. ...+++|+|.|+.++         .+ .++ +|+++||.+.
T Consensus       321 ~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~-~i~~q~GmF~~~gls---------~e-~v~-~L~e~~Vy~~  388 (420)
T 4h51_A          321 ELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWE-HVINQIGMFSFLGLS---------KA-QCE-YCQNHNIFIT  388 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHCCSSEEECCCC---------HH-HHH-HHHHTTEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-eecCCCceEEecCcC---------HH-HHH-HHHhCCEEEc
Confidence            2     24567788899999999999998762   133 235788999997663         23 344 5578899998


Q ss_pred             cCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHHHHHHH
Q 014936          373 PGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       373 ~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      |+.        |||++ .++++++.++++|.+++++..+
T Consensus       389 ~~g--------Ris~Agl~~~ni~~~a~aI~~vvr~i~r  419 (420)
T 4h51_A          389 VSG--------RANMAGLTHETALMLAQTINDAVRNVNR  419 (420)
T ss_dssp             TTC--------EEEGGGCCHHHHHHHHHHHHHHHC----
T ss_pred             CCC--------EEEeccCCHHHHHHHHHHHHHHHHHhhc
Confidence            864        99995 7999999999999999987655

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=100.00  E-value=3.3e-42  Score=328.55  Aligned_cols=333  Identities=14%  Similarity=0.147  Sum_probs=267.4

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCC-C---cHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTA-G---LPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~-g---~~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      .+++.+++|+.|+|+    +++++.+++++.+.+.....  ..|++.. |   .++||++||+|+++..+..+++++|++
T Consensus        53 ~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~  128 (427)
T 2hox_A           53 KIQGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVF  128 (427)
T ss_dssp             ECTTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEE
T ss_pred             cCCCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEE
Confidence            456688999999975    56678888888877732222  2498877 8   999999999999876666678999999


Q ss_pred             eCChHHHHHHHHHHh--------cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          106 TSGCTQAIDVAMALL--------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       106 ~~g~~~al~~~~~~l--------~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      |+|+++++.+++.++        .++||+|+++.|+|..+...++..|.+++.+        .+|++.|+++++++++++
T Consensus       129 t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~k~v  200 (427)
T 2hox_A          129 GVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIE  200 (427)
T ss_dssp             ESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEE
T ss_pred             eCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCceEE
Confidence            999999999999999        8999999999999999999999999887643        357888988888889999


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      ++++||||||.+++ +.       ++  ++..+.|+++..      ...++..+. .+++++++||||.|+++|+|+||+
T Consensus       201 ~l~~p~NPtG~~~~-~~-------l~--~~~~i~d~~~~~------~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~  263 (427)
T 2hox_A          201 MVTSPNNPEGLLRH-AV-------IK--GCKSIYDMVYYW------PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWA  263 (427)
T ss_dssp             EEESSCTTTCCCCC-CS-------ST--TCEEEEECTTCS------TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEE
T ss_pred             EEcCCCCCcccccH-HH-------Hc--CCCEEEeecccC------CCCCccccC-CCceEEEEeChhcCCCCCceEEEE
Confidence            99999999999999 42       22  556778877742      122333333 467899999999999999999999


Q ss_pred             EeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCC----------cHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          258 VTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQP----------DEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      ++++       +++++.+..... ...+++.+.|.++..+|+..          .++++++.++.++++++.+.+.|+++
T Consensus       264 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  336 (427)
T 2hox_A          264 LIKD-------ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQS  336 (427)
T ss_dssp             EECC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             EECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9953       268888877643 34678889999988888752          13466778899999999999999987


Q ss_pred             CCCcC-------------CCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEeeCChh
Q 014936          327 PCISC-------------PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFAVDPY  392 (415)
Q Consensus       327 ~~~~~-------------~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~  392 (415)
                      +++.+             +..|.+|+|+|++++.       +..+++..+++++||.+.||..|+. ++++|||++.+++
T Consensus       337 ~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e  409 (427)
T 2hox_A          337 DRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQD  409 (427)
T ss_dssp             SSEECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHH
T ss_pred             cCccccccccccccccccccCCCCceEEEEECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHH
Confidence            66652             1246679999999863       2445677777788999999999886 7899999988999


Q ss_pred             hHHHHHHHHHHHHHH
Q 014936          393 SLEECLDRIKSFYQR  407 (415)
Q Consensus       393 ~l~~~l~~l~~~~~~  407 (415)
                      ++++++++|++++++
T Consensus       410 ~l~~~l~~l~~~~~~  424 (427)
T 2hox_A          410 DFDQLMYYLKDMVKA  424 (427)
T ss_dssp             HHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999988753

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=8.6e-40  Score=302.91  Aligned_cols=316  Identities=17%  Similarity=0.247  Sum_probs=255.8

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      +.+++|+.|.+.    +++++.+++++.+.+.......|++. +..++|+++++++++.   .+++++|++|+|+++++.
T Consensus        19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~-~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~   90 (335)
T 1uu1_A           19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYDS-PDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY   90 (335)
T ss_dssp             CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCCS-SCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred             CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-chHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence            468999999853    56789999999998743334578764 6899999999999532   367889999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       115 ~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      .++.++   ||+|+++ |+|+.+...++..|.++..++.+  .++.+|++++     ++++++++++|+||||.++|.++
T Consensus        91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~  159 (335)
T 1uu1_A           91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE  159 (335)
T ss_dssp             HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred             HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence            999998   8999999 99999999999999999988874  3456787776     46889999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +.+|+++|   | ++|+||+|+++...  ..  +..++..+++++++|+||.|+++|+|+||+++++        ++++.
T Consensus       160 l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~~~  223 (335)
T 1uu1_A          160 IERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------KFIDA  223 (335)
T ss_dssp             HHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--------HHHHH
T ss_pred             HHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeCH--------HHHHH
Confidence            99999987   7 89999999976532  11  2223444578999999999988999999999954        67777


Q ss_pred             HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCC
Q 014936          275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDII  354 (415)
Q Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~  354 (415)
                      +..... .++++++.|.++.++|+.  .+++++.+++++++++.+.+.|+++ ++. + .|.+|+|+|++++.      .
T Consensus       224 l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~------~  291 (335)
T 1uu1_A          224 YNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFVFMEK------E  291 (335)
T ss_dssp             HHHHSC-TTCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECCT------H
T ss_pred             HHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCCCCeEEEEECCC------C
Confidence            776543 357889999999999976  3678889999999999999999987 676 4 46678899988863      1


Q ss_pred             CHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          355 DDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       355 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                      +..++...++ ++||.+.|+     ++++|++++. ++++++++++|+++
T Consensus       292 ~~~~~~~~l~-~~gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          292 EKERLLEHLR-TKNVAVRSF-----REGVRITIGK-REENDMILRELEVF  334 (335)
T ss_dssp             HHHHHHHHHH-HHTEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHH-HCCEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence            3456666665 579999983     4799999965 56799999888753

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=9.3e-38  Score=296.24  Aligned_cols=337  Identities=14%  Similarity=0.133  Sum_probs=260.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +++.++||+.|+|   .++++++.+.+++.+.+...  ....|+...|..++++++++++++.+|    .+++++|+|++
T Consensus        41 ~g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt  113 (398)
T 3a2b_A           41 DGRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGF  113 (398)
T ss_dssp             TTEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHH
T ss_pred             CCceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHH
Confidence            3567899999986   23557899999999887642  223455667778888888888887666    36999999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecCCCCcc
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPC  186 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~npt  186 (415)
                      +++..++.++.++||.|+++.|+|..+...++..|.+++.++.       +|+++|++.+++    +++++++++|+|||
T Consensus       114 ~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~npt  186 (398)
T 3a2b_A          114 QSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSME  186 (398)
T ss_dssp             HHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTT
T ss_pred             HHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCC
Confidence            9999999999999999999999999999999999999998875       578999988866    68899999999999


Q ss_pred             ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC-eEEEccCccccCCCCceEEEEEeeCCCCC
Q 014936          187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (415)
Q Consensus       187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  265 (415)
                      |.+++   +++|+++|+++|+++|+||+|+.+.++.........++..++ +++++|+||.++++|   ||+++++    
T Consensus       187 G~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~----  256 (398)
T 3a2b_A          187 GDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA----  256 (398)
T ss_dssp             CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH----
T ss_pred             CCccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH----
Confidence            99976   788899999999999999999987664222111122222233 499999999998778   9999864    


Q ss_pred             CChHHHHHHHHhh-c-cccCCchhHHHH-HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEE
Q 014936          266 FRKPKVVERMKKY-F-DILGDPATFIQA-AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVM  342 (415)
Q Consensus       266 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~-a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~  342 (415)
                          ++++.+... . ....+.+.+.|. ++..+|+.  .+++++.+++++++++++.+.|+++ ++. +..| .|+++|
T Consensus       257 ----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-~g~~~~  327 (398)
T 3a2b_A          257 ----DVIDFLKHNARSVMFSASMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDH-GFD-LGAT-ESPILP  327 (398)
T ss_dssp             ----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHT-TCC-BCSC-CSSEEE
T ss_pred             ----HHHHHHHHhcccceecCCCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhc-CCC-cCCC-CCCEEE
Confidence                677777663 2 222333444554 55567754  2445678899999999999999988 777 4344 478999


Q ss_pred             EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +.++..     .+..++...++++ ||.+.||..|..   .+++||+++  .+++++++++++|+++++++
T Consensus       328 ~~~~~~-----~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~  392 (398)
T 3a2b_A          328 IFIRSN-----EKTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA  392 (398)
T ss_dssp             EECCCH-----HHHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEcCCH-----HHHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence            988631     1355666776554 999999988753   579999997  48999999999999988753

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=100.00  E-value=3.3e-36  Score=287.51  Aligned_cols=334  Identities=13%  Similarity=0.203  Sum_probs=252.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCC--CCCcHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK------FNGYAP--TAGLPLTRRAIAEYLSRDLPYKL-TPNDVF  104 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~  104 (415)
                      ++++++|+.|.+.     +.++.+++++.+.+....      ...|++  ..+..++|+.++++++      . ++++++
T Consensus        26 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~   94 (420)
T 1t3i_A           26 GHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIV   94 (420)
T ss_dssp             TEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence            4568999999864     456889999998876421      123443  3567899999999983      3 568999


Q ss_pred             EeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936          105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (415)
Q Consensus       105 i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (415)
                      +|+|+++++.+++.++    .++||+|+++.|+|++    +...++..|.+++.++.+  .++.+|++++++++++++++
T Consensus        95 ~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~  172 (420)
T 1t3i_A           95 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKL  172 (420)
T ss_dssp             EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEE
T ss_pred             EcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceE
Confidence            9999999999999999    8999999999999998    456677889999998875  45668999999999888999


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      |++++|+||||.+++   +++|.++|+++|+++|+|++|+.+...    ..+..++   ..+++.|+||.++.+|  +||
T Consensus       173 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~----~~~~~~~---~di~~~s~sK~~~~~g--~G~  240 (420)
T 1t3i_A          173 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP----LDVQLID---CDWLVASGHKMCAPTG--IGF  240 (420)
T ss_dssp             EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHT---CSEEEEEGGGTTSCTT--CEE
T ss_pred             EEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc----CchhhcC---CCEEEEehhhhcCCCc--eEE
Confidence            999999999999988   788889999999999999999874321    1222333   3488999999887777  899


Q ss_pred             EEeeCCCCCCChHHHHHHHHhhcc---------------------ccCCchhHHHHHHHH-hhCCCcHHHHHHHHHHHHH
Q 014936          257 FVTTDPCGMFRKPKVVERMKKYFD---------------------ILGDPATFIQAAVPS-ILQQPDEVFFKKTLNLLKQ  314 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~a~~~-~l~~~~~~~~~~~~~~~~~  314 (415)
                      +++++        ++++.++....                     +..+.+++.+.++.. +++...+.++++..+++++
T Consensus       241 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~  312 (420)
T 1t3i_A          241 LYGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE  312 (420)
T ss_dssp             EEECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EEEch--------HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            99865        57766654321                     112344455554333 4433222346788899999


Q ss_pred             HHHHHHHHhhcCCCCcCCCCCC-----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC--------CCCC
Q 014936          315 SVDICYNKIKEIPCISCPHKPE-----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV--------GLKN  381 (415)
Q Consensus       315 ~~~~l~~~l~~~~~~~~~~~p~-----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~  381 (415)
                      +++++.+.|++++++.++ .|.     .+.++++.++.      .+..++.. .|.++||.+.||..|        +.++
T Consensus       313 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~l~~~gi~v~~~~~~~~~~~~~~g~~~  384 (420)
T 1t3i_A          313 LTHYLWQGLGQIPQLRLY-GPNPKHGDRAALASFNVAG------LHASDVAT-MVDQDGIAIRSGHHCTQPLHRLFDASG  384 (420)
T ss_dssp             HHHHHHHHHHTCTTEEEE-SCCGGGSCBCSEEEEEETT------BCHHHHHH-HHHTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred             HHHHHHHHHHhCCCeEEe-CCCccccccCCEEEEEECC------CCHHHHHH-HHHHCCeEEeeccccchHHHHhcCCCC
Confidence            999999999998888733 453     25555656652      14556654 457789999998644        3368


Q ss_pred             eEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          382 WLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       382 ~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ++||+++  .++++++.++++|+++++.+
T Consensus       385 ~iRis~~~~~~~~~i~~~~~~l~~~~~~~  413 (420)
T 1t3i_A          385 SARASLYFYNTKEEIDLFLQSLQATIRFF  413 (420)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence            9999996  48999999999999988764

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=100.00  E-value=1.1e-35  Score=282.07  Aligned_cols=334  Identities=13%  Similarity=0.094  Sum_probs=249.2

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC----C--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK----F--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~----~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++.++||+.++|-   ++.+++.+.+++.+.+....    .  ..|+...+..++++.++++++      . ++. ++++
T Consensus        42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~-~~~-i~~~  110 (399)
T 3tqx_A           42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T-DDT-ILYS  110 (399)
T ss_dssp             TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C-SEE-EEES
T ss_pred             CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C-CcE-EEEC
Confidence            4678999999642   24567899999988876411    1  112233446899999999883      2 244 4445


Q ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecC
Q 014936          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIIN  181 (415)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~  181 (415)
                      +|++++..++.++.++||.|+++.|+|..+...++..|.++..++.       .|++.+++.+++      +++++++++
T Consensus       111 sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~  183 (399)
T 3tqx_A          111 SCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG  183 (399)
T ss_dssp             CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred             chHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence            5688999999999999999999999999999999999999988875       467788877765      789999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      |+||||.+++   +++|+++|+++|+++|+||+|+.+.++..........+. .+..++++|+||+++  |++.||++++
T Consensus       184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~  258 (399)
T 3tqx_A          184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH  258 (399)
T ss_dssp             EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred             CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence            9999999988   889999999999999999999744333222222222221 234589999999987  4455999986


Q ss_pred             CCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +        ++++.+....   ..+.+.++..+.++...++.. ..+.++.+++++++++++.+.|+++ ++. + .+..
T Consensus       259 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~  326 (399)
T 3tqx_A          259 K--------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL-KTEGPQLRKQLQENSRYFRAGMEKL-GFQ-L-VPGN  326 (399)
T ss_dssp             H--------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCS
T ss_pred             H--------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHc-CCC-c-CCCC
Confidence            5        6777776542   123466777777777777642 1457888999999999999999988 777 4 3556


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +.++|+.++..     .+..++...++ ++||.+.|+..+..   .+++|++++  .+++++++++++|+++++++
T Consensus       327 ~~~~~~~~~~~-----~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  396 (399)
T 3tqx_A          327 HPIIPVMLGDA-----QLATNMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL  396 (399)
T ss_dssp             SSEEEEEEECH-----HHHHHHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence            77888877532     13456667665 46999998765532   469999995  68999999999999988753

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=100.00  E-value=7.3e-36  Score=282.69  Aligned_cols=319  Identities=13%  Similarity=0.137  Sum_probs=248.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILL  129 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi~  129 (415)
                      .++++.+.+++.+.+..    .|++.  ..++++.+++++.+.+|  ++++ ++++|+|+++++..++.++.++||+|++
T Consensus        43 ~~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g--~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~  114 (393)
T 1vjo_A           43 SNAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQ--TENPLTIAVSGTGTAAMEATIANAVEPGDVVLI  114 (393)
T ss_dssp             CCCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHT--CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhC--CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEE
Confidence            45678888888766542    45432  45777777777777666  3567 8999999999999999999999999999


Q ss_pred             cCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936          130 PRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (415)
Q Consensus       130 ~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  206 (415)
                      +.|+|++  +...++..|.++..++.+.  ++.+|+++|++.+++ +++++++++|+||||.+++   +++|+++|+++|
T Consensus       115 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  189 (393)
T 1vjo_A          115 GVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFG  189 (393)
T ss_dssp             EESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHT
T ss_pred             EcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcC
Confidence            9999998  8888999999999998754  456899999999987 7899999999999999976   678888899999


Q ss_pred             cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------c-
Q 014936          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------F-  279 (415)
Q Consensus       207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~-  279 (415)
                      +++|+||+|+..    .....+.   ..+..+++.|+||+++.+| |+||+++++        ++++.++..      . 
T Consensus       190 ~~li~Dea~~~g----~~~~~~~---~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~~  253 (393)
T 1vjo_A          190 TLLLVDTVTSLG----GVPIFLD---AWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANWY  253 (393)
T ss_dssp             CEEEEECTTTTT----TSCCCTT---TTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCST
T ss_pred             CEEEEECCcccc----CcCCccc---ccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCcee
Confidence            999999999942    1122222   2234588999999988888 999999965        566666421      0 


Q ss_pred             -------------cccC-CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC---ceEEE
Q 014936          280 -------------DILG-DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG---SMAVM  342 (415)
Q Consensus       280 -------------~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~  342 (415)
                                   .... +++++.+.++..+|+...+.++++.+++++++++++.+.|+++ ++. +..|.+   +.+++
T Consensus       254 ~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~  331 (393)
T 1vjo_A          254 LDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLS-LHVEKEYRLPTLTT  331 (393)
T ss_dssp             TCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCGGGBCSSEEE
T ss_pred             cCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCccccCCcEEE
Confidence                         1122 6788888888888865333457788999999999999999988 777 435543   35677


Q ss_pred             EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHHH
Q 014936          343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~~  405 (415)
                      +.++..     .+..++...+++++||.+.||..|..++++||++ +  .+++++++++++|++++
T Consensus       332 ~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          332 VCIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             EECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             EEcCCC-----CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence            777531     2466777777655599999999877789999995 3  46778999999998875

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=100.00  E-value=8.9e-36  Score=283.23  Aligned_cols=333  Identities=13%  Similarity=0.140  Sum_probs=249.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC------CCCCCCcHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNG------YAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVF  104 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~------y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~  104 (415)
                      ++++++|+.+.+.     +.++.+.+++.+.+....  ...      |.+..+..++|+.+++++      +. ++++|+
T Consensus        21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~   89 (406)
T 1kmj_A           21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI------NARSAEELV   89 (406)
T ss_dssp             TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT------TCSCGGGEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc------CCCCCCeEE
Confidence            4578999999864     356889999999886421  111      223456789999999998      33 578999


Q ss_pred             EeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936          105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (415)
Q Consensus       105 i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (415)
                      +|+|+++++.+++.++    .++||+|+++.|+|++..    ..++..|.++..++.+.  ++.+|+++|++++++++++
T Consensus        90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~  167 (406)
T 1kmj_A           90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRL  167 (406)
T ss_dssp             EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEE
T ss_pred             EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeE
Confidence            9999999999999999    899999999999998653    34667899999998753  4568999999999888999


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      |++++|+||||.+++   +++|+++|+++|+++|+|++|+.+..    ...+...   +..+++.|+||.++.+|  +||
T Consensus       168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~~~---~~d~~~~s~~K~~g~~G--~G~  235 (406)
T 1kmj_A          168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQAL---DCDFYVFSGHKLYGPTG--IGI  235 (406)
T ss_dssp             EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---TCSEEEEEGGGTTSCTT--CEE
T ss_pred             EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCccccc---CCCEEEEEchhccCCCC--cEE
Confidence            999999999999988   88889999999999999999987432    1122222   24588999999988778  899


Q ss_pred             EEeeCCCCCCChHHHHHHHHhhcc----------------------ccCCchhHHHHHHH-HhhCCCcHHHHHHHHHHHH
Q 014936          257 FVTTDPCGMFRKPKVVERMKKYFD----------------------ILGDPATFIQAAVP-SILQQPDEVFFKKTLNLLK  313 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~a~~-~~l~~~~~~~~~~~~~~~~  313 (415)
                      +++++        ++++.+.....                      +..+.+++.+.++. .+++...+.++++..++++
T Consensus       236 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~  307 (406)
T 1kmj_A          236 LYVKE--------ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ  307 (406)
T ss_dssp             EEECH--------HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             EEEeH--------HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            99864        56666654321                      11223445554433 4554322235678889999


Q ss_pred             HHHHHHHHHhhcCCCCcCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC--------CCCCeE
Q 014936          314 QSVDICYNKIKEIPCISCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV--------GLKNWL  383 (415)
Q Consensus       314 ~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------~~~~~i  383 (415)
                      ++++++.+.|+++|++. +..|  .+++ +++.++.      .+..++... |.++||.+.||..|        +.++++
T Consensus       308 ~~~~~l~~~L~~~~~~~-~~~~~~~~~~-~~~~~~~------~~~~~~~~~-l~~~gi~v~~g~~~~~~~~~~~g~~~~i  378 (406)
T 1kmj_A          308 NLMHYALSQLESVPDLT-LYGPQNRLGV-IAFNLGK------HHAYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMC  378 (406)
T ss_dssp             HHHHHHHHHHTTSTTEE-EESCTTCCSE-EEEEETT------CCHHHHHHH-HHHTTEECEEECTTCHHHHHHTTCSCEE
T ss_pred             HHHHHHHHHHhcCCCeE-EecCCCcCCE-EEEEECC------CCHHHHHHH-HhhCCcEEEeccccchHHHHhcCCCCeE
Confidence            99999999999988887 4355  4554 4445642      145566654 56779999998754        336899


Q ss_pred             EEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          384 RVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       384 Ri~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ||+++  +++++++.+++.|+++++.+
T Consensus       379 Ris~~~~~t~~~i~~~~~~l~~~~~~l  405 (406)
T 1kmj_A          379 RASLAMYNTHEEVDRLVTGLQRIHRLL  405 (406)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence            99996  48999999999999887653

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=100.00  E-value=3.2e-35  Score=277.58  Aligned_cols=325  Identities=14%  Similarity=0.120  Sum_probs=251.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~  130 (415)
                      .+.++.+.+++.+.+.    ..|++.  ..++++.+++++.+.+|.. +++++++|+|+++++..++.++.++||+|+++
T Consensus        29 ~~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~  101 (386)
T 2dr1_A           29 VACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVT  101 (386)
T ss_dssp             CCCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred             cCCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEE
Confidence            3557888887766543    245432  3678888888887777754 46789999999999999999999999999999


Q ss_pred             CCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc--CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936          131 RPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (415)
Q Consensus       131 ~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  206 (415)
                      .|+|++  +...++..|++++.++.+.  ++.+|+++|++++  .++++++++++|+||||.+.+   +++|+++|+++|
T Consensus       102 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  176 (386)
T 2dr1_A          102 IIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHD  176 (386)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred             cCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcC
Confidence            999998  8888899999999998754  4568999999988  467899999999999999965   788899999999


Q ss_pred             cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH----------
Q 014936          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----------  276 (415)
Q Consensus       207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~----------  276 (415)
                      +++|+|++|+.+.+.    .++..+   +..++++|+||+++.++ ++||+++++        ++++.+.          
T Consensus       177 ~~li~D~a~~~~~~~----~~~~~~---~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~  240 (386)
T 2dr1_A          177 KLVFVDAVSAMGGAD----IKFDKW---GLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFD  240 (386)
T ss_dssp             CEEEEECTTTBTTBC----CCTTTT---TCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTC
T ss_pred             CeEEEEccccccCcc----cccccc---CCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEe
Confidence            999999999975532    122222   34589999999987662 389999965        5655552          


Q ss_pred             ------hh---ccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---CceEEEE
Q 014936          277 ------KY---FDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---GSMAVML  343 (415)
Q Consensus       277 ------~~---~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~  343 (415)
                            ..   ....+++++..+.++..+|+...+. .+++.+++++++++++.+.|+++ ++. +..|.   .+.++|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~  318 (386)
T 2dr1_A          241 IPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLD-ILAEPGHESPTITAV  318 (386)
T ss_dssp             HHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCTTCBCSSEEEE
T ss_pred             HHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCe-eCcCccccCCceEEE
Confidence                  11   1224567888888888888642222 36788899999999999999988 777 33453   4778888


Q ss_pred             ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHHHH
Q 014936          344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                      .++..     .+..++...++++ ||.+.||..+...+++||+++  .+++++++++++|+++++++..+
T Consensus       319 ~~~~~-----~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~  382 (386)
T 2dr1_A          319 LTPPG-----IKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELKKQ  382 (386)
T ss_dssp             ECCTT-----CCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EcCCC-----CCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence            88631     2466777777655 999999987656789999996  68999999999999998876543

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=100.00  E-value=3.5e-35  Score=277.21  Aligned_cols=329  Identities=12%  Similarity=0.086  Sum_probs=246.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CC---CCCC--CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK---FNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~---~~~y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++.++||+.|.+   .++++++.+++++.+.+.. +.   ...|  +...+..++|+.+++++      +++  +.++++
T Consensus        38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~--~~i~~~  106 (384)
T 1bs0_A           38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL------GYS--RALLFI  106 (384)
T ss_dssp             TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH------TCS--EEEEES
T ss_pred             CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh------CCC--cEEEeC
Confidence            567899999874   2345689999999988764 21   1123  44567889999999998      332  455555


Q ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC---ceEEEecCCCC
Q 014936          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGN  184 (415)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~n  184 (415)
                      +|++++..++.++.++||.|+++.|+|..+...++..|.+++.++.       .|+++|++.+++.   ++++++++|+|
T Consensus       107 sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n  179 (384)
T 1bs0_A          107 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS  179 (384)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             CcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            5589999999999999999999999999999999999999988874       4788998887643   67888899999


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  264 (415)
                      |||.+++   +++|+++|+++|+++|+||+|+.+.++.........++.. ..++++|+||+++++|   ||+++++   
T Consensus       180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~di~~~s~sK~~~~~G---G~~~~~~---  249 (384)
T 1bs0_A          180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVK-PELLVVTFGKGFGVSG---AAVLCSS---  249 (384)
T ss_dssp             TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCC-CSEEEEESSSTTSSCC---EEEEECH---
T ss_pred             CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCC-CcEEEeeccchhhccC---cEEEeCH---
Confidence            9999987   7788999999999999999998765431111111222221 2388999999998777   9999864   


Q ss_pred             CCChHHHHHHHHhhc-c--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEE
Q 014936          265 MFRKPKVVERMKKYF-D--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV  341 (415)
Q Consensus       265 ~~~~~~~~~~~~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  341 (415)
                           ++++.+.... .  .+.+.+++.+.++.++++...+.+.++..++++++++++.+.|+++ ++. + .+..++++
T Consensus       250 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~  321 (384)
T 1bs0_A          250 -----TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSAIQ  321 (384)
T ss_dssp             -----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSSBC
T ss_pred             -----HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCCCEE
Confidence                 6777776542 1  2235788888887777754211156788899999999999999988 676 4 35667788


Q ss_pred             EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      |+.++..     .+..++...++ ++||.+.|+..|+.   .+++||+++  ++++++++++++|+++
T Consensus       322 ~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          322 PLIVGDN-----SRALQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             CEEEESH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEeCCH-----HHHHHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            8877521     13456666665 55999999987753   378999996  3899999999998764

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=100.00  E-value=9.6e-35  Score=277.80  Aligned_cols=335  Identities=14%  Similarity=0.095  Sum_probs=249.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CC-CCCCCCC----CCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK-FNGYAPT----AGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~-~~~y~~~----~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      +++.++||+.|++   .++.+++.+++++.+.+.. +. ...|...    ....++++.++++++      .  ++.+++
T Consensus        62 ~g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~  130 (427)
T 2w8t_A           62 RGKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVF  130 (427)
T ss_dssp             TTEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEE
T ss_pred             CCceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEe
Confidence            3567899999973   2345789999999988764 21 2223223    334788888888872      2  366777


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC----CceEEEecCC
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINP  182 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p  182 (415)
                      ++|++++..++.++.++||.|+++.|+|.++...++..|.+++.++.       .|+++|++.+++    ++++|++++|
T Consensus       131 ~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~  203 (427)
T 2w8t_A          131 STGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGV  203 (427)
T ss_dssp             SCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred             cCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence            77788999999999999999999999999999999999999988764       589999988865    6789999999


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      +||||.+++   +++|+++|+++|+++|+||+|+.+.++..+......++. .+.+++++||||+++++|   ||+++++
T Consensus       204 ~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~  277 (427)
T 2w8t_A          204 YSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH  277 (427)
T ss_dssp             ETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC
T ss_pred             CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH
Confidence            999999987   888899999999999999999998775322222211221 234689999999998777   9999865


Q ss_pred             CCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-C
Q 014936          262 PCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-G  337 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-~  337 (415)
                              ++++.+...   ...+.+.++..+.++.++|+..  ..+++.+++++++++++.+.|+++ ++. +..+. .
T Consensus       278 --------~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~  345 (427)
T 2w8t_A          278 --------PKFEAVRLACRPYIFTASLPPSVVATATTSIRKL--MTAHEKRERLWSNARALHGGLKAM-GFR-LGTETCD  345 (427)
T ss_dssp             --------TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHH--TSCHHHHHHHHHHHHHHHHHHHHH-TCE-ESCSSCC
T ss_pred             --------HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCCC
Confidence                    344444433   1123456777777766676532  124678889999999999999987 776 33233 5


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      +.++|+.++..     .+..++...++ ++||.+.|+..|+.   .+++|++++  +++++++.++++|+++++++.
T Consensus       346 ~~~~~~~~~~~-----~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~  416 (427)
T 2w8t_A          346 SAIVAVMLEDQ-----EQAAMMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVG  416 (427)
T ss_dssp             SSEEEEEESSH-----HHHHHHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEECCH-----HHHHHHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            67888888531     12456666665 45999999987764   368999996  489999999999999987643

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=100.00  E-value=3.5e-35  Score=277.01  Aligned_cols=331  Identities=12%  Similarity=0.085  Sum_probs=244.0

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC-------CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-------~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +.|+.+..     .++++.+++++.+.+......       .|....+..++++.+++++      +++++++++|+|++
T Consensus         3 ~yld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t   71 (384)
T 1eg5_A            3 VYFDNNAT-----TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT   71 (384)
T ss_dssp             EECBTTTC-----CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred             EEEecCcc-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHH
Confidence            44555542     356899999999988642100       1222345688999999998      46778999999999


Q ss_pred             HHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCC
Q 014936          111 QAIDVAMALLS----RPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG  183 (415)
Q Consensus       111 ~al~~~~~~l~----~~gd~vi~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~  183 (415)
                      +++..++.++.    ++||+|+++.|+|+++...+   +..|.+++.++.++  ++.+|+++|++.++++++++++++|+
T Consensus        72 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~  149 (384)
T 1eg5_A           72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN  149 (384)
T ss_dssp             HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred             HHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCC
Confidence            99999999998    79999999999999876655   67899999988753  46689999999998889999999999


Q ss_pred             CccccCCCHHHHHHHHHHHhhcC--cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          184 NPCGNVYSYQHLQKLAETANKLK--TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       184 nptG~~~~~~~l~~i~~~~~~~~--~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      ||||.+++   +++|.++|+++|  +++|+||+|+...    ....+..+   +..+++.|+||.++++|  +||+++++
T Consensus       150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~~~----~~~~~~~~---~~di~~~s~sK~~g~~G--~G~~~~~~  217 (384)
T 1eg5_A          150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTIGK----IPFSLEKL---EVDYASFSAHKFHGPKG--VGITYIRK  217 (384)
T ss_dssp             TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTTTT----SCCCCTTT---CCSEEEEEGGGGTSCTT--CEEEEECT
T ss_pred             CCcccccC---HHHHHHHHHhcCCceEEEEEhhhhcCC----cccCchhc---CCCEEEecHHHhcCCCc--eEEEEEcC
Confidence            99999988   678888888999  9999999998421    11122222   34588999999988888  79999976


Q ss_pred             CCCCCChHHHHHHHHh----hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-
Q 014936          262 PCGMFRKPKVVERMKK----YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-  336 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-  336 (415)
                      +..      +...+..    .....++.+.+.+.++..+|+.. .+++++.+++++++++++.+.|++ +++.++ .|. 
T Consensus       218 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~-~~~~  288 (384)
T 1eg5_A          218 GVP------IRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHII-TPLE  288 (384)
T ss_dssp             TSC------CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEEC-SCTT
T ss_pred             CCc------cccccccCcccccccCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEe-CCcc
Confidence            310      0111111    11134567888888888888642 346788899999999999999998 477733 432 


Q ss_pred             C--ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhh
Q 014936          337 G--SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYS  393 (415)
Q Consensus       337 ~--g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~  393 (415)
                      +  +.++++.++.      .+..++...+ .++||.+.+|..|+.                   .+++||+++  .++++
T Consensus       289 ~~~~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~  361 (384)
T 1eg5_A          289 ISLPNTLSVSFPN------IRGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEE  361 (384)
T ss_dssp             SBCTTEEEEECTT------CCHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHH
T ss_pred             cCCCCEEEEEeCC------CCHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHH
Confidence            2  3456666642      1456666665 678999999887642                   368999997  68999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQRHA  409 (415)
Q Consensus       394 l~~~l~~l~~~~~~~~  409 (415)
                      +++++++|+++++++.
T Consensus       362 i~~~~~~l~~~~~~~~  377 (384)
T 1eg5_A          362 VDYFLKKIEEILSFLD  377 (384)
T ss_dssp             HHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999987654

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=100.00  E-value=1.5e-33  Score=267.19  Aligned_cols=315  Identities=15%  Similarity=0.094  Sum_probs=232.4

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHh----cCCCCCCCCCCCcH---HHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALL----SEKFNGYAPTAGLP---LTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~----~~~~~~y~~~~g~~---~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++|+.    .+++.+.+++.+.++    ......|+. .|.+   ++++.++++++        .+++++++|++
T Consensus        21 ~~~~~~~p~~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g--------~~~~i~~~~g~   87 (404)
T 1e5e_A           21 QFGAAIPPIY----QTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK--------TEACVATSSGM   87 (404)
T ss_dssp             TTCCSSCCCC----CCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT--------CSEEEEESSHH
T ss_pred             CCCCcCCCCc----CCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC--------CCcEEEeCChH
Confidence            4678888763    333333333333332    223346776 5666   89999999983        24788888889


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC  186 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt  186 (415)
                      +++..++.+++++||+|+++.|+|+++..    .++..|++++.++.+       |++++++.+++++++|++++|+|||
T Consensus        88 ~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Npt  160 (404)
T 1e5e_A           88 GAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANPT  160 (404)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTTT
T ss_pred             HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCCC
Confidence            99999999999999999999999999888    678899999988762       7899999998899999999999999


Q ss_pred             ccCCCHHHHHHHHHHHhh-cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCC
Q 014936          187 GNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCG  264 (415)
Q Consensus       187 G~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~  264 (415)
                      |.+++   +++|+++|++ +|+++|+||+|+.+.+.    .++ .+   ++++++.|+||.|+++|+|+ ||+++++   
T Consensus       161 G~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~---  226 (404)
T 1e5e_A          161 LKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA---  226 (404)
T ss_dssp             CCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH---
T ss_pred             CcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH---
Confidence            99985   8889999999 99999999999987653    122 22   34589999999999999998 9999875   


Q ss_pred             CCChHHHHH-HHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC--------------
Q 014936          265 MFRKPKVVE-RMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP--------------  327 (415)
Q Consensus       265 ~~~~~~~~~-~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------------  327 (415)
                           ++++ .+......  ....+++.+.++...++.     +..+.++..++.+.+.+.+++.+              
T Consensus       227 -----~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p  296 (404)
T 1e5e_A          227 -----DLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHE  296 (404)
T ss_dssp             -----HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSST
T ss_pred             -----HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCc
Confidence                 5666 77665432  345788888888888875     34445555566666666665443              


Q ss_pred             CCcCCCCC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-------------------------
Q 014936          328 CISCPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-------------------------  378 (415)
Q Consensus       328 ~~~~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-------------------------  378 (415)
                      ++. +..|    .++++.| +++.        ..+....++.+.|| +.+|..|+                         
T Consensus       297 ~~~-~~~~~~~~~g~~~~~-~~~~--------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~  365 (404)
T 1e5e_A          297 GHD-IAKKQMRMYGSMITF-ILKS--------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAA  365 (404)
T ss_dssp             THH-HHHHHCSSCCSEEEE-EETT--------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHT
T ss_pred             cHH-HHHhhCCCCceEEEE-EeCC--------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhc
Confidence            222 1111    1455555 7752        33445667788899 45554443                         


Q ss_pred             -C-CCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          379 -L-KNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       379 -~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                       . ++++|||++.  |+++++++.|+++++...
T Consensus       366 g~~~~~iRis~g~--e~~~~li~~l~~al~~~~  396 (404)
T 1e5e_A          366 GITDGMIRLSVGI--EDADELIADFKQGLDALL  396 (404)
T ss_dssp             TCCTTEEEEECCS--SCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHH
Confidence             1 5799999988  889999999999887654

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=100.00  E-value=6.8e-35  Score=276.80  Aligned_cols=334  Identities=15%  Similarity=0.105  Sum_probs=244.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CC-----CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~-----~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++++++|..++..   +++++|.+.+++.+.+.. ..     ...|+...+..++|+.+|++++       .+++|++++
T Consensus        45 g~~~i~~~~~~~~---~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-------~~~~i~~~s  114 (401)
T 2bwn_A           45 KQDITVWCGNDYL---GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ-------KEAALVFSS  114 (401)
T ss_dssp             EEEEEECSCSCTT---SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT-------CSEEEEESC
T ss_pred             CCcEEEeeCCCcc---cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC-------CCcEEEECC
Confidence            4567888877531   244577899999988764 11     1245565678999999999983       257788877


Q ss_pred             ChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC----CCceEEEecC
Q 014936          108 GCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN  181 (415)
Q Consensus       108 g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~  181 (415)
                      |++ ++..++..+.  ++||.|+++.|+|+++...++..|++++.++.+       |++++++.++    ++++++++++
T Consensus       115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~  186 (401)
T 2bwn_A          115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES  186 (401)
T ss_dssp             HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred             cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence            766 7777776653  589999999999999999999999999988752       6778877765    5789999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      |+||||.+++   +++|+++|+++|+++|+||+|+.+.++..+...+...+. ...+++++|+||+|+++|   ||++++
T Consensus       187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~  260 (401)
T 2bwn_A          187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS  260 (401)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred             CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence            9999999987   788899999999999999999966554222211111221 123588999999998888   999885


Q ss_pred             CCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +        ++.+.+....   ......++..+.++.++++...+..+++.+++++++++++.+.|+++ ++. +..|.+
T Consensus       261 ~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~  330 (401)
T 2bwn_A          261 A--------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-IIDHGS  330 (401)
T ss_dssp             H--------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-BCCCSS
T ss_pred             H--------HHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCC
Confidence            4        5666665431   12233445777766666654222345788899999999999999987 777 434554


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCC---CeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLK---NWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                       .++|+.++..     .+..++...+++++||.+.|+..|+.+   +++|++++  .++++++.++++|++++++
T Consensus       331 -~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~  399 (401)
T 2bwn_A          331 -HIVPVVIGDP-----VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR  399 (401)
T ss_dssp             -SCEEEECCCH-----HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred             -CeEEEEeCCh-----HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence             4788887531     134566667665779999998877643   58999996  5899999999999988754

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=100.00  E-value=3.9e-35  Score=277.33  Aligned_cols=330  Identities=15%  Similarity=0.103  Sum_probs=245.9

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-CC-----CCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FN-----GYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~-----~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++.++|+.+.+     .+.++.+++++.+.+.... ..     .|+. ..+..++|+.+++++      ++++++|++|+
T Consensus        15 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~   83 (390)
T 1elu_A           15 ANKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD   83 (390)
T ss_dssp             TTSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred             CCeEEecCCcc-----CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence            45788888863     3456789999988876421 01     3443 357789999999998      46778999999


Q ss_pred             ChHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936          108 GCTQAIDVAMALL-SRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (415)
Q Consensus       108 g~~~al~~~~~~l-~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  182 (415)
                      |+++++..++.++ .++||+|+++.|+|+++...    ++..|.+++.++.++++++.+|++.|++.+++++++|++++|
T Consensus        84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~  163 (390)
T 1elu_A           84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL  163 (390)
T ss_dssp             SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred             ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence            9999999999999 79999999999999987653    566799999998764356778999999999888999999999


Q ss_pred             CCccccCCCHHHHHHHHHHHh----hcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE
Q 014936          183 GNPCGNVYSYQHLQKLAETAN----KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~----~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  258 (415)
                      +||||.+++   +++|.++|+    ++|+++|+||+|+.+.    ....+..   ....+++.|+||. ..+|.++||++
T Consensus       164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~~~---~~~d~~~~s~~K~-~~~~~g~G~~~  232 (390)
T 1elu_A          164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDFSR---LEVDYYAFTGHKW-FAGPAGVGGLY  232 (390)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCTTT---SCCSEEEEESSST-TCCCTTCEEEE
T ss_pred             ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCChhh---cCCCEEEcccccc-ccCCCceEEEE
Confidence            999999988   788888888    9999999999998632    1112222   2234889999994 45566799999


Q ss_pred             eeCCCCCCChHHHHHHHHhh-----------------------ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHH
Q 014936          259 TTDPCGMFRKPKVVERMKKY-----------------------FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQ  314 (415)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~  314 (415)
                      +++        ++++.+...                       ....++++...+.++..+++...+ .++++..+++++
T Consensus       233 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~  304 (390)
T 1elu_A          233 IHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQ  304 (390)
T ss_dssp             ECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred             ECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            975        233333321                       111245566777766666543222 247888999999


Q ss_pred             HHHHHHHHhhcCCCCcCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CC
Q 014936          315 SVDICYNKIKEIPCISCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VD  390 (415)
Q Consensus       315 ~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~  390 (415)
                      +++++.+.|++++++.++ .|  ..+.+++++++..     .+..++...+ .++||.+.+|.   .++++||+++  .+
T Consensus       305 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~---~~~~iRis~~~~~~  374 (390)
T 1elu_A          305 RSEFLWRGLNQLPHVHCL-ATSAPQAGLVSFTVDSP-----LGHRAIVQKL-EEQRIYLRTIA---DPDCIRACCHYITD  374 (390)
T ss_dssp             HHHHHHHHHHHSTTEEES-CSSCCSSSEEEEEECSS-----SCHHHHHHHH-HHTTEECEEET---TTTEEEEECCTTCC
T ss_pred             HHHHHHHHHHhcCCcEEe-cCccccccEEEEEcCCC-----CCHHHHHHHH-HHCCEEEEecC---CCCeEEEecccCCC
Confidence            999999999988788733 32  3455555577521     2466677776 56799999986   3589999994  78


Q ss_pred             hhhHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSF  404 (415)
Q Consensus       391 ~~~l~~~l~~l~~~  404 (415)
                      ++++++++++|+++
T Consensus       375 ~~~i~~~~~~l~~~  388 (390)
T 1elu_A          375 EEEINHLLARLADF  388 (390)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998753

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=100.00  E-value=1.2e-34  Score=275.22  Aligned_cols=332  Identities=13%  Similarity=0.091  Sum_probs=250.6

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-CCC---CCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EKF---NGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-~~~---~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      +++.++||+.|+|-   ++.+++.+.+++.+.+.. ...   ..|+  ...+..++|+.+++++      +++ +.+ ++
T Consensus        43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i-~~  111 (401)
T 1fc4_A           43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-DAI-LY  111 (401)
T ss_dssp             TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-EEE-EE
T ss_pred             CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-cEE-Ee
Confidence            46789999999641   123589999999988764 211   1221  2456789999999998      334 455 45


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEec
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVII  180 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~  180 (415)
                      ++|++++..+++++.++||.|+++.|+|..+...++..|.+++.++.       .|++++++.+++      ++++++++
T Consensus       112 ~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~  184 (401)
T 1fc4_A          112 SSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD  184 (401)
T ss_dssp             SCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred             CChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence            55678999999999999999999999999888889999999988763       478888888764      68899999


Q ss_pred             CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccC-Cccc-CCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEE
Q 014936          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVF-GDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWF  257 (415)
Q Consensus       181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~  257 (415)
                      +|+||||.+++   +++|.++|+++|+++|+||+|+ ++.+ .+....+...+.. +..++++|+||.| +++|   ||+
T Consensus       185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~  257 (401)
T 1fc4_A          185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT  257 (401)
T ss_dssp             SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred             CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence            99999999988   8888999999999999999996 6543 3333222122222 3458899999998 5555   999


Q ss_pred             EeeCCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC
Q 014936          258 VTTDPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK  334 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  334 (415)
                      ++++        ++++.+....   ..+.+.+++.+.++.++|+..  ...++.+++++++++++.+.|+++ ++. + .
T Consensus       258 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~  324 (401)
T 1fc4_A          258 AARK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV--EAGSELRDRLWANARQFREQMSAA-GFT-L-A  324 (401)
T ss_dssp             EECH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHT-TCC-B-C
T ss_pred             EcCH--------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c-c
Confidence            9854        6777776543   124577888888888887642  113678889999999999999988 777 4 3


Q ss_pred             CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          335 PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       335 p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      |..++++|++++..     .+..++...++ ++||.+.++..|+.   .+++||+++  .+++++++++++|+++++++
T Consensus       325 ~~~~~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  397 (401)
T 1fc4_A          325 GADHAIIPVMLGDA-----VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             CSSSSEEEEEEECH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEEcCCh-----HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence            67788999888531     13456666664 56999999987764   358999996  68999999999999988753

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=100.00  E-value=1.7e-34  Score=273.38  Aligned_cols=332  Identities=12%  Similarity=0.065  Sum_probs=248.0

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCT  110 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~  110 (415)
                      +...+++..|.      +++++.+++++.+.+..    .|.  ...+..++++.+++++      +++++ ++++|+|++
T Consensus        17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t   80 (393)
T 2huf_A           17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASGH   80 (393)
T ss_dssp             CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHH
T ss_pred             CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHH
Confidence            44556776663      56788898888776543    232  1245688999999988      45565 899999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccc
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCG  187 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG  187 (415)
                      +++..++.++.++||+|+++.|+|+++  ...++..|.+++.++.++  ++.+|++++++.+++ ++++|++++|+||||
T Consensus        81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG  158 (393)
T 2huf_A           81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG  158 (393)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred             HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence            999999999999999999999999874  334566899999998754  346899999999887 789999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccc-cCCCCceEEEEEeeCCCCCC
Q 014936          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMF  266 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~r~G~~~~~~~~~~~  266 (415)
                      .+++   +++|+++|+++|+++|+|++++...    ....+..+   +..+++.|+||+ ++++|+  ||+++++     
T Consensus       159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~sK~l~g~~G~--G~~~~~~-----  221 (393)
T 2huf_A          159 VLQG---LEGVGALCHQHNCLLIVDTVASLGG----APMFMDRW---EIDAMYTGSQKVLGAPPGI--TPVSFSH-----  221 (393)
T ss_dssp             EECC---CTTHHHHHHHTTCEEEEECTTTBTT----BCCCTTTT---TCSEEECCSSSTTCCCSSC--EEEEECH-----
T ss_pred             ccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCcchhhc---CccEEEECCCcccccCCCe--EEEEECH-----
Confidence            9987   6788888999999999999987522    11122222   345888999997 456776  9999864     


Q ss_pred             ChHHHHHHHHhhc----c--------------------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936          267 RKPKVVERMKKYF----D--------------------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNK  322 (415)
Q Consensus       267 ~~~~~~~~~~~~~----~--------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  322 (415)
                         ++++.++...    .                    ..++++...+.++.++++...+..+++..++++++++++.+.
T Consensus       222 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~  298 (393)
T 2huf_A          222 ---RAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRG  298 (393)
T ss_dssp             ---HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence               5777765430    0                    012456666666666665322234778889999999999999


Q ss_pred             hhcCCCCcCCCCCC---CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHH
Q 014936          323 IKEIPCISCPHKPE---GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEE  396 (415)
Q Consensus       323 l~~~~~~~~~~~p~---~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~  396 (415)
                      |+++ ++.++ .|.   .+.+++++++..     .+..++...+++++||.+.+|..|...+++||++ +  ++++++++
T Consensus       299 L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~  371 (393)
T 2huf_A          299 LQDA-GFELY-ADPKDRLSTVTTIKVPQG-----VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDR  371 (393)
T ss_dssp             HHHT-TCCBS-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHH
T ss_pred             HHHc-CCeec-cCccccCCcEEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHH
Confidence            9988 77733 443   345777777521     2466777777666799999998776678999999 6  46889999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRHAK  410 (415)
Q Consensus       397 ~l~~l~~~~~~~~~  410 (415)
                      ++++|+++++++..
T Consensus       372 ~~~~l~~~~~~~~~  385 (393)
T 2huf_A          372 VLQVFQEAVAAVKP  385 (393)
T ss_dssp             HHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999876543

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=100.00  E-value=9.1e-34  Score=269.72  Aligned_cols=331  Identities=12%  Similarity=0.087  Sum_probs=244.7

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--C----CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--F----NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~----~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      .++.++||+.+++   .+++.+|.+.+++.+.+....  .    ..|+......++++.++++++        .+..+++
T Consensus        57 ~g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~  125 (409)
T 3kki_A           57 ASPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--------FDECLLS  125 (409)
T ss_dssp             CCTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--------CSEEEEE
T ss_pred             CCCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--------CCeEEEe
Confidence            3567899988763   356678999999999887521  1    122333456789999999983        2345666


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCc
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNP  185 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~np  185 (415)
                      ++|++++..++.++.++||.|+++.|+|..+...+...|.++..++.       .|+++|++.+++ +++++++++|+||
T Consensus       126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~np  198 (409)
T 3kki_A          126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYST  198 (409)
T ss_dssp             SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTT
T ss_pred             cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence            77789999999999999999999999999999999999999888764       589999998875 4789999999999


Q ss_pred             cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936          186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (415)
Q Consensus       186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  264 (415)
                      ||.+++   +++|+++|+++|+++|+||+|+.+.++..+.......+. .+..+++.|+||+|+++|   ||+++++   
T Consensus       199 tG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~---  269 (409)
T 3kki_A          199 LGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN---  269 (409)
T ss_dssp             TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS---
T ss_pred             CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH---
Confidence            999987   888999999999999999999986554222221111221 123488899999988775   9999865   


Q ss_pred             CCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEE
Q 014936          265 MFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV  341 (415)
Q Consensus       265 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  341 (415)
                           ++++.+...   ...+...++..+.++.+.++..  +..++.+++++++++++.+.|+++ ++. +  +..++++
T Consensus       270 -----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~--~~~~~~~  338 (409)
T 3kki_A          270 -----EVNRCVPFISYPAIFSSTLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLT-I--RSESQII  338 (409)
T ss_dssp             -----SGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCC-C--CCSSSEE
T ss_pred             -----HHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c--CCCCCEE
Confidence                 233433332   1123345666666776666532  223677889999999999999988 676 3  2477888


Q ss_pred             EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      |+.++..     .+..++...+++ +||.+.|+..+..   .+++||+++  .+++++++++++|+++++.
T Consensus       339 ~~~~~~~-----~~~~~~~~~L~~-~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  403 (409)
T 3kki_A          339 GLETGDE-----RNTEKVRDYLES-NGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY  403 (409)
T ss_dssp             EEEEESH-----HHHHHHHHHHHH-TTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCH-----HHHHHHHHHHHH-CCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence            8887532     124456666654 5999988654422   479999995  6899999999999998864

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=100.00  E-value=4.7e-34  Score=270.19  Aligned_cols=330  Identities=10%  Similarity=0.044  Sum_probs=242.5

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHH
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM  117 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~  117 (415)
                      +.|..+.+     .++++.+++++.+.+..  ...+....+..++|+.+++++      +++++++++|+|+++++.+++
T Consensus        10 ~yl~~~~~-----~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~~~   76 (392)
T 2z9v_A           10 VITLTAGP-----VNAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEAAA   76 (392)
T ss_dssp             SEECSSSC-----CCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHHHH
T ss_pred             ceeecCCC-----cCCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHHHH
Confidence            45555543     45678888888776543  111222235678899999887      456789999999999999999


Q ss_pred             HHhcCCCCEEEEcCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc--CCCceEEEecCCCCccccCCCHH
Q 014936          118 ALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       118 ~~l~~~gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .++.++||+|+++.|+|+++  ...++..|.+++.++.+.  ++.+|+++|++++  .++++++++++|+||||.+++  
T Consensus        77 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~--  152 (392)
T 2z9v_A           77 ASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP--  152 (392)
T ss_dssp             HHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC--
T ss_pred             HHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc--
Confidence            99999999999999999875  344566799999998754  3458999999988  457899999999999999987  


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                       +++|.++|+++|+++|+|++|+...    ....+..++   ..++++|+||++ +.+|  +||+++++        +++
T Consensus       153 -l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~~---~d~~~~s~sK~~~~~~g--~G~l~~~~--------~~~  214 (392)
T 2z9v_A          153 -IDAIGALVSAHGAYLIVDAVSSFGG----MKTHPEDCK---ADIYVTGPNKCLGAPPG--LTMMGVSE--------RAW  214 (392)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTTBTT----BSCCGGGGT---CSEEEECSSSTTCCCSC--CEEEEECH--------HHH
T ss_pred             -HHHHHHHHHHcCCeEEEEcccccCC----ccccccccc---ceEEEecCcccccCCCc--eeEEEECH--------HHH
Confidence             6788889999999999999998522    112222222   348889999963 3456  59999865        566


Q ss_pred             HHHHhh---------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC
Q 014936          273 ERMKKY---------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC  331 (415)
Q Consensus       273 ~~~~~~---------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  331 (415)
                      +.++..                     ....++.+...+.++..+++...+..+++..++++++++++.+.|+++ ++.+
T Consensus       215 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~  293 (392)
T 2z9v_A          215 AKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSV  293 (392)
T ss_dssp             HHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred             HHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence            666431                     111244566666666666653211226788899999999999999987 7773


Q ss_pred             CCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHH
Q 014936          332 PHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       332 ~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~  404 (415)
                      + .|.    .+.++++.++..     .+..++...+++++||.+.+|..+..++++|+++ +  .+++++++++++|+++
T Consensus       294 ~-~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~  367 (392)
T 2z9v_A          294 W-AASDSIASPTTTAVRTPDG-----VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGA  367 (392)
T ss_dssp             S-SSSGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred             c-cCCccccCCceEEEECCCC-----CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHH
Confidence            3 423    467788887531     2466777777555599999998766678999995 4  6899999999999999


Q ss_pred             HHHHH
Q 014936          405 YQRHA  409 (415)
Q Consensus       405 ~~~~~  409 (415)
                      ++++.
T Consensus       368 ~~~~~  372 (392)
T 2z9v_A          368 MNAAG  372 (392)
T ss_dssp             HHHTT
T ss_pred             HHHcC
Confidence            87643

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=100.00  E-value=1.3e-35  Score=278.67  Aligned_cols=324  Identities=11%  Similarity=0.081  Sum_probs=240.0

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHH-HHHHHhhhCCCCCCCCcEE
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRA-IAEYLSRDLPYKLTPNDVF  104 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~-ia~~~~~~~~~~~~~~~i~  104 (415)
                      ++++++|+.|.+.    .++++.+.+++.+.+....        ...|.+..+..++++. ++++++      .+  +++
T Consensus         6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~   73 (371)
T 2e7j_A            6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VAR   73 (371)
T ss_dssp             --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEE
T ss_pred             CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEE
Confidence            4567888886532    4568999999988776421        1234456789999999 999983      33  999


Q ss_pred             EeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEee--ccCCCCCCCChhHHHhhcC-----CCceEE
Q 014936          105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD--LLPDKGWEVDLDDIESLAD-----QNTVAL  177 (415)
Q Consensus       105 i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~l~~~~~-----~~~~~v  177 (415)
                      +++|+++++..++.++.++||+|+++.|+|+++...++..|++++.++  .+  .++.+|+++|++.++     ++++++
T Consensus        74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~v  151 (371)
T 2e7j_A           74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY--PDYAITPENFAQTIEETKKRGEVVLA  151 (371)
T ss_dssp             EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSCEEEE
T ss_pred             EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC--CCCCcCHHHHHHHHHhhcccCCeEEE
Confidence            999999999999999999999999999999999999999999999998  54  346789999999887     688999


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      ++++|+||||.+++   +++|+++|+++|+++|+|++|+.+...    ..+..++.   .++++|+||+++.+ .|+||+
T Consensus       152 ~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~~---di~~~s~sK~~~~~-~~~G~~  220 (371)
T 2e7j_A          152 LITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIGA---DFIVGSGHKSMAAS-GPIGVM  220 (371)
T ss_dssp             EEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHTC---SEEEEEHHHHSSCC-SSCEEE
T ss_pred             EEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcCC---CEEEecCCcCCCCC-CCcEEE
Confidence            99999999999987   588888899999999999999985432    22333333   38899999987655 499999


Q ss_pred             EeeCCCCCCChHHHHHH-HHhhcc---c-----cCCchhHHHHHHHHhhCCCcHHHHH-HHHHHH--HHHHHHHHHHhhc
Q 014936          258 VTTDPCGMFRKPKVVER-MKKYFD---I-----LGDPATFIQAAVPSILQQPDEVFFK-KTLNLL--KQSVDICYNKIKE  325 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~-~~~~~~---~-----~~~~~~~~~~a~~~~l~~~~~~~~~-~~~~~~--~~~~~~l~~~l~~  325 (415)
                      ++++        ++++. ++....   .     .++.++..+.++..+++.     ++ +..+++  +++++++.+.|++
T Consensus       221 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~~~~l~~~L~~  287 (371)
T 2e7j_A          221 GMKE--------EWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPH-----VRERIKRWDEEVEKARRFAAEMEK  287 (371)
T ss_dssp             EECT--------TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHH-----HHHHGGGHHHHHHHHHHHHHHHHH
T ss_pred             EEec--------hhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9976        23333 333221   1     344566666666666643     22 566777  8889999999988


Q ss_pred             CCCCcCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC------CCeEE-EEee---CChhh
Q 014936          326 IPCISCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL------KNWLR-VTFA---VDPYS  393 (415)
Q Consensus       326 ~~~~~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~iR-i~~~---~~~~~  393 (415)
                      + ++..+ .|.  .+.++|++++        +..++...+ .++||.+.| ..+..      ++++| ++++   .++++
T Consensus       288 ~-~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~  355 (371)
T 2e7j_A          288 L-GIKQL-GDNPHNHDLMFFHAE--------VLYEISKKA-KGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEE  355 (371)
T ss_dssp             T-TCEEE-SSSSCCSSEEEEECH--------HHHHHHHHS-SSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHH
T ss_pred             c-CcEEe-cCCCccCceEEEECC--------CHHHHHHHH-HHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHH
Confidence            7 77733 443  4668888774        245565555 578999988 43322      68999 9997   68999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQR  407 (415)
Q Consensus       394 l~~~l~~l~~~~~~  407 (415)
                      ++.++++|++++++
T Consensus       356 i~~~~~~l~~~~~~  369 (371)
T 2e7j_A          356 VDYVLNAFKEIIEK  369 (371)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988764

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=1.5e-33  Score=266.85  Aligned_cols=322  Identities=14%  Similarity=0.048  Sum_probs=238.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-------
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP-------  123 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~-------  123 (415)
                      .++++.+.+++.+.+..... .+....+..++++.+++++.+.+|  ++++++++|+|+++++..++.++..+       
T Consensus        40 ~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~  116 (397)
T 3f9t_A           40 SNVLPITRKIVDIFLETNLG-DPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRK  116 (397)
T ss_dssp             CCCCTHHHHHHHHHTTCCTT-SGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence            45578899999988764221 222212445666666666665554  56789999999999999999998765       


Q ss_pred             ------CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHH
Q 014936          124 ------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQ  196 (415)
Q Consensus       124 ------gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~  196 (415)
                            ||+|+++.|+|+++...++..|++++.++.++  ++.+|+++|++++++ +++++++++|+||||.+.+   ++
T Consensus       117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~  191 (397)
T 3f9t_A          117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IE  191 (397)
T ss_dssp             TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HH
T ss_pred             cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HH
Confidence                  99999999999999999999999999998754  467899999999988 8999999999999999965   77


Q ss_pred             HHHHHHhhcCcEEEEccccCCcccCCCCc-------ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          197 KLAETANKLKTLVIADEVYGHLVFGDKPF-------VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~-------~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      +|.++|+++|+++|+||+|+.+.+...+.       .....+.. ...+++.|++|. +.+|.|+|+++++++.      
T Consensus       192 ~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~~------  263 (397)
T 3f9t_A          192 ELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKM-GHCPIPSGGILFKDIG------  263 (397)
T ss_dssp             HHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTT-TCCCSSCEEEEESSGG------
T ss_pred             HHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccc-cCCCCCceEEEEeCHH------
Confidence            88999999999999999998765432110       00011111 234788899997 5678899999987632      


Q ss_pred             HHHHHHHhhccc------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          270 KVVERMKKYFDI------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       270 ~~~~~~~~~~~~------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                       +.+.+......            ....+...+.++...+.   ...++++.++++++++++.+.|+++ ++..+ .+..
T Consensus       264 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~  337 (397)
T 3f9t_A          264 -YKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG---REGQRKIVNECMENTLYLYKKLKEN-NFKPV-IEPI  337 (397)
T ss_dssp             -GGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCCS
T ss_pred             -HHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cCCC
Confidence             33322211110            01235556666666654   3677888899999999999999988 77734 5556


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~  406 (415)
                      +.++++.++        +..++...+ .++||.+.++..   ++++||+++  ++++++++++++|+++++
T Consensus       338 ~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          338 LNIVAIEDE--------DYKEVCKKL-RDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             SSEEEEECT--------THHHHHHHH-HHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred             ccEEEEEeC--------CHHHHHHHH-HhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence            777777764        345666666 456999998764   589999996  589999999999998764

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=100.00  E-value=1.5e-33  Score=265.72  Aligned_cols=328  Identities=14%  Similarity=0.086  Sum_probs=240.7

Q ss_pred             CCCcHHHHHHHHHHHhcCC---CCCCCC----CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc--
Q 014936           51 FHTTHVATEAVAEALLSEK---FNGYAP----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS--  121 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~---~~~y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~--  121 (415)
                      .++++.+++++.+.+....   ...|..    .....++|+.+++++      +++++++++|+|+++++.+++.++.  
T Consensus        10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~l~~~   83 (382)
T 4eb5_A           10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAMR   83 (382)
T ss_dssp             CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchHHHHHHHHHHHHhh
Confidence            3568999999999886411   111321    135677888888887      4567899999999999999999998  


Q ss_pred             --CCCCEEEEcCCCCcchHHHHH---hCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHH
Q 014936          122 --RPGANILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ  196 (415)
Q Consensus       122 --~~gd~vi~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~  196 (415)
                        ++||+|++++|+|+++...+.   ..|++++.+++++  ++.+|+++|++.++++++++++++|+||||.+++   ++
T Consensus        84 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~  158 (382)
T 4eb5_A           84 NARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VE  158 (382)
T ss_dssp             HGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HH
T ss_pred             ccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HH
Confidence              899999999999998876654   3699999998753  4568999999999888999999999999999987   67


Q ss_pred             HHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH-
Q 014936          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM-  275 (415)
Q Consensus       197 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-  275 (415)
                      +|+++|+++|++ |+|++|+...    ....+..++   ..++++|+||.++.+|  +||++++++..+.   ...... 
T Consensus       159 ~i~~l~~~~~~~-i~D~a~~~g~----~~~~~~~~~---~di~~~s~sK~~g~~g--~G~~~~~~~~~l~---~~~~~~~  225 (382)
T 4eb5_A          159 EISEVLAGKAAL-HIDATASVGQ----IEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILGGG  225 (382)
T ss_dssp             HHHHHHTTSSEE-EEECTTTBTT----BCCCHHHHT---CSEEEEETGGGTCCSS--CEEEEEETTCCCC---CSSCSSC
T ss_pred             HHHHHHHHCCCE-EEEcchhcCC----cccCccccC---CCEEEeehHHhcCCCc--eEEEEEccccccC---ceecCCC
Confidence            889999999999 9999998421    111222222   3488999999977666  7999987642111   000000 


Q ss_pred             HhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC---ceEEEEecCccccCC
Q 014936          276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG---SMAVMLKLNLSLLDD  352 (415)
Q Consensus       276 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~l~~~~~~~  352 (415)
                      .......++++...+.++..+++.. .+++++.+++++++++++.+.|+++|++. +..|.+   +.++++.++.     
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~-----  298 (382)
T 4eb5_A          226 QENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESY-LNGHPEKRLPNNVNVRFSY-----  298 (382)
T ss_dssp             TGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEE-ECSCSSSBCTTEEEEEETT-----
T ss_pred             ccccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeE-EeCCcccCCCCEEEEEeCC-----
Confidence            0011123455666666666666532 24578888999999999999999988877 334432   5567777652     


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                       .+..++...+ .++||.+.+|..|..                   .+++||+++  .++++++.++++|+++++++++.
T Consensus       299 -~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~  376 (382)
T 4eb5_A          299 -IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM  376 (382)
T ss_dssp             -SCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -cCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence             2466676666 567999999876432                   479999996  58999999999999999887653

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=100.00  E-value=4.9e-34  Score=270.39  Aligned_cols=321  Identities=11%  Similarity=0.081  Sum_probs=241.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC-C-CCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP-T-AGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANI  127 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~-~-~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~v  127 (415)
                      .++++.+++++.+.+..    .|.+ + ....++|+.+++++      +.+++ ++++|+|+++++..++.++.++||+|
T Consensus        27 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~v   96 (396)
T 2ch1_A           27 SNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRV   96 (396)
T ss_dssp             CCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh------CCCCCcEEEECCcHHHHHHHHHHHhcCCCCeE
Confidence            45678888877665432    2432 1 23789999999998      45677 89999999999999999999999999


Q ss_pred             EEcCCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          128 LLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       128 i~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +++.|+|+++.  ..++..|++++.++.+.  ++.+|++++++.+++ ++++|++++|+||||.+++   +++|+++|++
T Consensus        97 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~  171 (396)
T 2ch1_A           97 LIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ  171 (396)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             EEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHH
Confidence            99999999874  47788999999998753  456899999999877 7899999999999999988   6788888889


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------  278 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------  278 (415)
                      +|+++|+||+|+...    ....+..++.   .+++.|++|.++. +.++|++++++        ++++.+...      
T Consensus       172 ~~~~li~Dea~~~g~----~~~~~~~~~~---d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~  235 (396)
T 2ch1_A          172 HDCLLIVDAVASLCG----VPFYMDKWEI---DAVYTGAQKVLGA-PPGITPISISP--------KALDVIRNRRTKSKV  235 (396)
T ss_dssp             TTCEEEEECTTTBTT----BCCCTTTTTC---CEEECCCC-CCCC-CSSCEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred             cCCEEEEEccccccC----CccchhhcCc---CEEEEcCCccccC-CCCeEEEEECH--------HHHHhhhhccCcccc
Confidence            999999999998422    2222222222   2667899997432 23469998865        455555321      


Q ss_pred             ------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC---
Q 014936          279 ------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG---  337 (415)
Q Consensus       279 ------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---  337 (415)
                                        ....++.+...+.++..+|+...++++++..++++++++++.+.|+++ ++. +..+.+   
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~  313 (396)
T 2ch1_A          236 FYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLD-IFVKDPRHR  313 (396)
T ss_dssp             GGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCC-BSSCSGGGB
T ss_pred             eEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCe-eccCCcccc
Confidence                              111245677778877777764333557788899999999999999988 777 334543   


Q ss_pred             -ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHHHHHHH
Q 014936          338 -SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       338 -g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                       +.+++++++..     .+..++...+++++||.+.+|..+..++++||++ +  .+++++++++++|+++++++.
T Consensus       314 ~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~  384 (396)
T 2ch1_A          314 LPTVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH  384 (396)
T ss_dssp             CTTEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred             CCceEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence             24778777531     2567777777666799999987666678999999 4  478999999999999988754

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=100.00  E-value=9.4e-34  Score=264.10  Aligned_cols=316  Identities=19%  Similarity=0.178  Sum_probs=235.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~  130 (415)
                      .++++.+++++.+.+..  ...|....+..++|+.+++++      +++++++++|+|+++++.+++.++.++||+|+++
T Consensus        10 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~   81 (352)
T 1iug_A           10 VRLHPKALEALARPQLH--HRTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP   81 (352)
T ss_dssp             CCCCHHHHHHHHSCCCC--TTSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred             CCCCHHHHHHhccCCCC--ccCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence            56789999999877642  111222235688999999998      4567899999999999999999999999999999


Q ss_pred             CCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc--C
Q 014936          131 RPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--K  206 (415)
Q Consensus       131 ~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~  206 (415)
                      .|+|+++.  ..++..|.+++.++.+.  ++.+|++++++   ++++++++++|+||||.+++   +++|.++|+++  |
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~  153 (352)
T 1iug_A           82 VYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPE  153 (352)
T ss_dssp             ECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred             eCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCC
Confidence            99999865  44566899999998753  34578888877   57889999999999999987   67888899999  9


Q ss_pred             cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHH---------HH
Q 014936          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVER---------MK  276 (415)
Q Consensus       207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~---------~~  276 (415)
                      +++|+|++|+...    ....+..++   ..+++.|+||++ +.+|  +||+++++        ++++.         +.
T Consensus       154 ~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~~~~~~~~~~~~  216 (352)
T 1iug_A          154 GLVGADMVTSLLV----GEVALEAMG---VDAAASGSQKGLMCPPG--LGFVALSP--------RALERLKPRGYYLDLA  216 (352)
T ss_dssp             CEEEEECTTTBTT----BCCCSGGGT---CSEEEEESSSTTCCCSC--EEEEEECH--------HHHHTCCCCSSTTCHH
T ss_pred             CEEEEECCccccC----cceeccccC---eeEEEecCcccccCCCc--eeEEEECH--------HHHHHhhCCCceeeHH
Confidence            9999999998522    111222222   347889999953 3334  89999865        33332         11


Q ss_pred             ----hh--ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-CceEEEEecCccc
Q 014936          277 ----KY--FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-GSMAVMLKLNLSL  349 (415)
Q Consensus       277 ----~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-~g~~~~~~l~~~~  349 (415)
                          ..  ....++.+...+.++.++++... .++++.+++++++++++.+.|+++ ++. +..|. .+.++|++++.. 
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~-  292 (352)
T 1iug_A          217 RELKAQKEGESAWTPAINLVLAVAAVLEEVL-PRLEEHLALKAWQNALLYGVGEEG-GLR-PVPKRFSPAVAAFYLPEG-  292 (352)
T ss_dssp             HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHG-GGHHHHHHHHHHHHHHHHHHHHHT-TCE-ESCSSBCTTCEEEECCTT-
T ss_pred             HHHhhcccCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccccccCCeEEEEEcCCC-
Confidence                11  12235667777777766665422 227788899999999999999988 777 43453 677888888631 


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                          .+..++...+. ++||.+.+|..+..++++||+++  .+++++++++++|+++++++
T Consensus       293 ----~~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  348 (352)
T 1iug_A          293 ----VPYARVKEAFA-QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI  348 (352)
T ss_dssp             ----CCHHHHHHHHH-TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCHHHHHHHHH-HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence                24667777765 55999999885544689999996  47899999999999988765

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=1e-33  Score=266.22  Aligned_cols=322  Identities=16%  Similarity=0.151  Sum_probs=240.8

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~--~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      ++..++||+.+.|..  .++ +++.+.+++.+.+...  ....|+. .+..++++.+++++      ++ ++++++++|+
T Consensus        26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~-~~~v~~~~g~   95 (375)
T 2eh6_A           26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLYEN-PWQEELAHKLVKHF------WT-EGKVFFANSG   95 (375)
T ss_dssp             TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTBCC-HHHHHHHHHHHHTS------SS-CEEEEEESSH
T ss_pred             CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCcccCC-HHHHHHHHHHHhhc------CC-CCeEEEeCch
Confidence            467899999997532  255 7899999999987642  1235644 56788999999986      33 4899999999


Q ss_pred             HHHHHHHHHH---hc---CCC-CEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCCCCCCChhHHHhh
Q 014936          110 TQAIDVAMAL---LS---RPG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus       110 ~~al~~~~~~---l~---~~g-d~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      ++++.+++.+   +.   ++| |+|++++|+|+.+...+...+..             +..++.       .|+++|+++
T Consensus        96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  168 (375)
T 2eh6_A           96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKL  168 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHH
Confidence            9999999875   34   788 99999999999877655443322             222221       489999999


Q ss_pred             cCCCceEEEecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936          170 ADQNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI  248 (415)
Q Consensus       170 ~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  248 (415)
                      +++++++|++++|+||||.+ .+.+++++|+++|+++|+++|+||+|+++...+... .+..++...+++   ||||.++
T Consensus       169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~d~~---s~SK~~~  244 (375)
T 2eh6_A          169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY-AYQHFNLKPDVI---ALAKGLG  244 (375)
T ss_dssp             CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGG
T ss_pred             hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch-hhhhcCCCCCEE---EEccccc
Confidence            98889999999999999998 568889999999999999999999999755443221 233333222333   7889987


Q ss_pred             CCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                       +|+|+||+++++        ++++.++.. ...+.+.+++.+.++.++|+.     +++..++++++++++.+.|++++
T Consensus       245 -~g~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~  310 (375)
T 2eh6_A          245 -GGVPIGAILARE--------EVAQSFTPGSHGSTFGGNPLACRAGTVVVDE-----VEKLLPHVREVGNYFKEKLKELG  310 (375)
T ss_dssp             -TTSCCEEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CCCCeEEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHh
Confidence             699999999975        566555542 122345678888888777753     22677888999999999998874


Q ss_pred             CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      . . . .+..|+++|++++.       +..++...++ ++||.+.|+.    ++++|++++  .+++++++++++|+++
T Consensus       311 ~-~-~-~~~~g~~~~~~~~~-------~~~~~~~~l~-~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~  374 (375)
T 2eh6_A          311 K-G-K-VKGRGLMLGLELER-------ECKDYVLKAL-EKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREI  374 (375)
T ss_dssp             S-S-E-EEEETTEEEEECSS-------CCHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             c-C-C-ceEEEEEEEEEEcC-------cHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            3 3 2 35568899998863       3456777665 5799999863    589999984  6899999999999865

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=100.00  E-value=1.2e-33  Score=270.15  Aligned_cols=333  Identities=14%  Similarity=0.154  Sum_probs=243.8

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC------------CCcHHHHHHHHHHHhhhCCCCCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT------------AGLPLTRRAIAEYLSRDLPYKLT   99 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~------------~g~~~lr~~ia~~~~~~~~~~~~   99 (415)
                      ..+++.+.|+.+.+     .++++.+.+++.+.+....  .|+.+            ....++++.+++++      +++
T Consensus        18 ~~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~   84 (423)
T 3lvm_A           18 RAMKLPIYLDYSAT-----TPVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GAD   84 (423)
T ss_dssp             --CCSSEECBTTTC-----CCCCHHHHHHHTTSSSTTS--CCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCC
T ss_pred             cccCCCEeecCCCc-----CCCCHHHHHHHHHHHhhcc--cccCCCccccchhHHHHHHHHHHHHHHHHHc------CCC
Confidence            34778888888764     3567889999988766111  22221            23467888888887      457


Q ss_pred             CCcEEEeCChHHHHHHHHHHhcC----CCCEEEEcCCCCcchHHHH---HhCCCeEEEeeccCCCCCCCChhHHHhhcCC
Q 014936          100 PNDVFVTSGCTQAIDVAMALLSR----PGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ  172 (415)
Q Consensus       100 ~~~i~i~~g~~~al~~~~~~l~~----~gd~vi~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~  172 (415)
                      ++++++|+|+++++.+++.++.+    +||+|+++.|+|+++...+   ...|+++..++.++  ++.+|+++|++++++
T Consensus        85 ~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~  162 (423)
T 3lvm_A           85 PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD  162 (423)
T ss_dssp             GGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred             CCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC
Confidence            78999999999999999998873    7999999999999987776   45599999998754  456899999999998


Q ss_pred             CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       173 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      +++++++++|+||||.+++   +++|+++|+++|+++|+||+|+....    ...+...+   ..+++.|+||.++.+| 
T Consensus       163 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~~---~di~~~s~sK~~g~~g-  231 (423)
T 3lvm_A          163 DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----PIDLSQLK---VDLMSFSGHKIYGPKG-  231 (423)
T ss_dssp             TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTSC---CSEEEEESTTTTSCSS-
T ss_pred             CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CcChhhcC---CCEEEechHHhcCCCC-
Confidence            9999999999999999988   77788889999999999999986332    11222222   3488899999877666 


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHhhc--------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKKYF--------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                       +||++++++.        .+.+....        ...++.+...+.++..+++.. ..++++..++++++++.+.+.|+
T Consensus       232 -~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~  301 (423)
T 3lvm_A          232 -IGALYVRRKP--------RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNGIK  301 (423)
T ss_dssp             -CEEEEECBTT--------BCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -eEEEEEeccc--------cCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence             8999987522        12222211        123455666666666666532 24478889999999999999999


Q ss_pred             cCCCCcCCCCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCe
Q 014936          325 EIPCISCPHKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNW  382 (415)
Q Consensus       325 ~~~~~~~~~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~  382 (415)
                      ++|++.++ .+.+   +.++++.++.      .+..++...+ .+  |.+.+|..|..                   .++
T Consensus       302 ~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~l~~~l-~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~  371 (423)
T 3lvm_A          302 DIEEVYLN-GDLEHGAPNILNVSFNY------VEGESLIMAL-KD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSS  371 (423)
T ss_dssp             TSTTEEEE-SCSTTBCTTEEEEEETT------SCHHHHHHHT-TT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTE
T ss_pred             cCCCEEEe-CCccccCCCeEEEEeCC------CCHHHHHHHH-hh--heeccCccccCCCccccHHHHHhCCCccccCce
Confidence            99888743 4432   3455555532      2455665554 44  88889877543                   388


Q ss_pred             EEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936          383 LRVTFA--VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       383 iRi~~~--~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      +||+++  .++++++.++++|+++++++++
T Consensus       372 iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~  401 (423)
T 3lvm_A          372 IRFSLGRFTTEEEIDYTIELVRKSIGRLRD  401 (423)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence            999995  5789999999999999988764

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=100.00  E-value=6.3e-33  Score=261.27  Aligned_cols=328  Identities=14%  Similarity=0.108  Sum_probs=234.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC---------CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPT---------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS  121 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~---------~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~  121 (415)
                      .++++.+.+++.+.+....  .++..         ....++++.+++++      +++++++++++|+++++.+++.++.
T Consensus        10 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~~~a~~~~~~~~~   81 (382)
T 4hvk_A           10 KPVDERILEAMLPYMTESF--GNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYA   81 (382)
T ss_dssp             CCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhhc--CCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECCchHHHHHHHHHhh
Confidence            4567899999999886421  22221         11236677777776      3567899999999999999999998


Q ss_pred             ----CCCCEEEEcCCCCcchHHHHH---hCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          122 ----RPGANILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       122 ----~~gd~vi~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                          ++||+|+++.++|+++...+.   ..|+++..++.+.  ++.+|+++|+++++++++++++++|+||||.+++   
T Consensus        82 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---  156 (382)
T 4hvk_A           82 MRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---  156 (382)
T ss_dssp             HHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---
T ss_pred             hhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---
Confidence                899999999999998876544   3699999998753  4568999999999989999999999999999977   


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +++|+++|+++|+ +|+|++|+....    ...+...+   ..+++.|+||.++.+|  +|++++++...+.  +.+...
T Consensus       157 ~~~i~~l~~~~~~-li~D~a~~~~~~----~~~~~~~~---~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~--~~~~~~  224 (382)
T 4hvk_A          157 VEEISEVLAGKAA-LHIDATASVGQI----EVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEAKLQ--PVILGG  224 (382)
T ss_dssp             HHHHHHHHSSSSE-EEEECTTTBTTB----CCCHHHHT---CSEEEEESGGGTSCTT--CEEEEEETTCCCC--CSSCSS
T ss_pred             HHHHHHHHHHcCE-EEEEhHHhcCCC----CCCchhcC---CCEEEEeHHHhcCCCc--eEEEEEcCccCcC--cccccC
Confidence            6688889999999 999999875321    12222222   2388999999876666  7777776532111  000000


Q ss_pred             HHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC---ceEEEEecCccccC
Q 014936          275 MKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG---SMAVMLKLNLSLLD  351 (415)
Q Consensus       275 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~l~~~~~~  351 (415)
                      ........++.+...+.++..+++. ..+++++..++++++++++.+.|+++|++.+. .+.+   +.++++.++.    
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~----  298 (382)
T 4hvk_A          225 GQENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFSY----  298 (382)
T ss_dssp             CTGGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEETT----
T ss_pred             CCcCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCccccCCCEEEEEECC----
Confidence            0001111345566677776666652 23577889999999999999999998888733 4432   3456666642    


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                        .+..++...+ .++||.+.+|..|..                   ++++|++++  .++++++.++++|+++++++.+
T Consensus       299 --~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~  375 (382)
T 4hvk_A          299 --IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS  375 (382)
T ss_dssp             --CCHHHHHHHH-HHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --CCHHHHHHHH-HHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence              2456666555 667999999976653                   478999996  5789999999999999988766


Q ss_pred             Hh
Q 014936          411 QL  412 (415)
Q Consensus       411 ~~  412 (415)
                      ..
T Consensus       376 ~~  377 (382)
T 4hvk_A          376 MS  377 (382)
T ss_dssp             TC
T ss_pred             hc
Confidence            43

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=4.5e-34  Score=273.37  Aligned_cols=347  Identities=13%  Similarity=0.093  Sum_probs=239.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .++.++||+.+.+....++ +++.+++++.+.+.....  ..|.+..+..++++.|++++.   + . .+++|++|+|++
T Consensus        39 ~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~  112 (426)
T 1sff_A           39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS  112 (426)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred             CCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence            4677899988874322222 678999999998865322  135556788999999999973   2 1 348999999999


Q ss_pred             HHHHHHHH---HhcCCCCEEEEcCCCCcchHH-HHHhCCCe-------------EEEeeccCC---CCCCCChhHHHhhc
Q 014936          111 QAIDVAMA---LLSRPGANILLPRPGFPIYEL-SAAFRHIE-------------VRHFDLLPD---KGWEVDLDDIESLA  170 (415)
Q Consensus       111 ~al~~~~~---~l~~~gd~vi~~~p~y~~~~~-~~~~~g~~-------------~~~~~~~~~---~~~~~~~~~l~~~~  170 (415)
                      +++..+++   .+.++| .|++++|+|+.+.. .+...|.+             +..++.+..   .++.+|+++|++++
T Consensus       113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l  191 (426)
T 1sff_A          113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF  191 (426)
T ss_dssp             HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence            99999988   677776 89999999987654 45555542             555665320   12346899999887


Q ss_pred             C-----CCceEEEe-cCCCCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccC
Q 014936          171 D-----QNTVALVI-INPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL  243 (415)
Q Consensus       171 ~-----~~~~~v~i-~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  243 (415)
                      +     +++++|++ .+++| || .++|.+++++|+++|+++|+++|+||+|+++.+.+... .+...+.   .+.+.||
T Consensus       192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~---~~di~s~  266 (426)
T 1sff_A          192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGV---APDLTTF  266 (426)
T ss_dssp             HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTS---CCSEEEE
T ss_pred             HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCC---CCCEEEE
Confidence            5     34555544 24467 99 78899999999999999999999999999876554321 1222221   1234489


Q ss_pred             ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936          244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNK  322 (415)
Q Consensus       244 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  322 (415)
                      ||+|++ |+|+||+++++        ++++.+... ...+.+.+++.+.++.++|+...+   +...++++++++.+.+.
T Consensus       267 sK~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~  334 (426)
T 1sff_A          267 AKSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDG  334 (426)
T ss_dssp             CGGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred             cccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHH
Confidence            999886 99999999975        566655432 223456788899888877753211   13456666677777766


Q ss_pred             hhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhh
Q 014936          323 IKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYS  393 (415)
Q Consensus       323 l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~  393 (415)
                      |++    ++.+. ...+ .|+++|++++....   +...+..++...++ ++||.+.||..+  .+++||+++  .++++
T Consensus       335 l~~~~~~~~~~~-~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~  409 (426)
T 1sff_A          335 LLAIAEKHPEIG-DVRG-LGAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQ  409 (426)
T ss_dssp             HHHHHHTCTTEE-EEEE-ETTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHH
T ss_pred             HHHHHHhCCCeE-EEEE-EEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHH
Confidence            664    33332 2133 37899998853100   00012455666664 569999998764  589999984  68999


Q ss_pred             HHHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQRH  408 (415)
Q Consensus       394 l~~~l~~l~~~~~~~  408 (415)
                      +++++++|+++++++
T Consensus       410 i~~~~~~l~~~l~~~  424 (426)
T 1sff_A          410 IRQGLEIISQCFDEA  424 (426)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988754

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=100.00  E-value=1.5e-33  Score=267.93  Aligned_cols=336  Identities=20%  Similarity=0.185  Sum_probs=241.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +++.++||+.+.+....++ .+|.+.+++.+.+.....  ..|+. ....++++.+++++        ..+++++|+|++
T Consensus        37 ~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~--------~~~~v~~~~gg~  106 (406)
T 4adb_A           37 QGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSGA  106 (406)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSCC-HHHHHHHHHHHHHS--------SCSEEEEESSHH
T ss_pred             CCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCcCC-HHHHHHHHHHHhhC--------CCCeEEEeCcHH
Confidence            4678999998843222222 578999999998875321  22332 23456666666665        356999999999


Q ss_pred             HHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCCChhHHHhh
Q 014936          111 QAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus       111 ~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      +++..+++++..       +| |.|++++|+|+.+...+...+.             ++..++.       .|+++|+++
T Consensus       107 ~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~  179 (406)
T 4adb_A          107 EANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASAL  179 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHH
Confidence            999999998864       56 9999999999988665544443             2233322       379999999


Q ss_pred             cCCCceEEEecCCCCccccCC--CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936          170 ADQNTVALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW  247 (415)
Q Consensus       170 ~~~~~~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (415)
                      +++++++++++ |+||+|.++  +.+++++|+++|++||+++|+||+|+++.+.+... .+...+...+++   ||||.+
T Consensus       180 l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~  254 (406)
T 4adb_A          180 IDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKAL  254 (406)
T ss_dssp             CSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGG
T ss_pred             hcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhh
Confidence            98888888887 999999988  99999999999999999999999999876655432 222333333344   679998


Q ss_pred             CCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       248 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      + +|+|+||+++++        ++++.+.... ..+.+.+++.+.++.++|+....   ++..++++++++++.+.|+++
T Consensus       255 ~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~  322 (406)
T 4adb_A          255 G-GGFPVGALLATE--------ECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTI  322 (406)
T ss_dssp             G-TTSCCEEEEECH--------HHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-CCCCeEEEEEcH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence            8 899999999865        6777666542 33567788999888888764211   566777778888888877764


Q ss_pred             CC-CcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHH
Q 014936          327 PC-ISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIK  402 (415)
Q Consensus       327 ~~-~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~  402 (415)
                      .. +..+ ..+..|.++++.++...   ..+..++...++ ++||.+.|+.    .+++|+++  ..+++++++++++|+
T Consensus       323 ~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~  394 (406)
T 4adb_A          323 NHRYGLFSEVRGLGLLIGCVLNADY---AGQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFA  394 (406)
T ss_dssp             HHHHCCEEEEEEETTEEEEEECTTT---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred             HHhCCCceEEEEEEEEEEEEEeCCc---HHHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence            11 1101 12335778888886421   013567777765 5599999865    58999965  578999999999999


Q ss_pred             HHHHHHHH
Q 014936          403 SFYQRHAK  410 (415)
Q Consensus       403 ~~~~~~~~  410 (415)
                      ++++++.+
T Consensus       395 ~~l~~~~~  402 (406)
T 4adb_A          395 AACEHFVS  402 (406)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            99987654

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=100.00  E-value=3.4e-33  Score=263.39  Aligned_cols=319  Identities=12%  Similarity=0.126  Sum_probs=237.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGANIL  128 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~i~~g~~~al~~~~~~l~~~gd~vi  128 (415)
                      .++++.+++++.+.+....  .+.......++++.+++++      ++++  +++++|+|+++++. ++..+.++||+|+
T Consensus        11 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~la~~~------~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi   81 (384)
T 3zrp_A           11 TTIKEDVLVAGLENNVGFT--SKEFVEALAYSLKGLRYVM------GASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL   81 (384)
T ss_dssp             SCCCHHHHHHTTCCSCCTT--SHHHHHHHHHHHHHHHHHH------TCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred             CCCCHHHHHHhhccccccc--cHHHHHHHHHHHHHHHHHh------CCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence            5667888888766543211  1111234567788888877      3455  88999999999999 9999999999999


Q ss_pred             EcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhc
Q 014936          129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKL  205 (415)
Q Consensus       129 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  205 (415)
                      ++.|+|++  +...++..|.+++.++.+.  ++.+|++++++.+++ +++++++++|+||||.+++   +++|.++|+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  156 (384)
T 3zrp_A           82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY  156 (384)
T ss_dssp             EECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG
T ss_pred             EecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc
Confidence            99999965  5566778899999998754  446899999999987 7899999999999999987   77889999999


Q ss_pred             CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH----------
Q 014936          206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM----------  275 (415)
Q Consensus       206 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~----------  275 (415)
                      |+++|+|++|+....    ...+...   +..+++.|+||+++. +.++||+++++        ++++.+          
T Consensus       157 ~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~~  220 (384)
T 3zrp_A          157 VELIVVDGVSSVGAE----EVKAEEW---NVDVYLTASQKALGS-AAGLGLLLLSP--------KALSILDSQNSIAGYY  220 (384)
T ss_dssp             EEEEEEECTTTTTTS----CCCTTTT---TCSEEEEETTSTTCC-CSSEEEEEECH--------HHHHHHHHCCCSCCST
T ss_pred             CCEEEEECcccccCc----ccccccc---CCCEEEecCcccccC-CCceEEEEECH--------HHHHHhcCCCCCCccc
Confidence            999999999986332    1122222   234889999998642 23499999865        555554          


Q ss_pred             ---Hhhc----------ccc-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----C
Q 014936          276 ---KKYF----------DIL-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----G  337 (415)
Q Consensus       276 ---~~~~----------~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~  337 (415)
                         ....          ... ++++...+.++..+++......+++..++++++++++.+.|+++ ++. +..+.    .
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~  298 (384)
T 3zrp_A          221 LDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLE-IVARRPESYS  298 (384)
T ss_dssp             TCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSCSSGGGBC
T ss_pred             ccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCe-EccCcccccC
Confidence               1111          111 25566666666666653223447888999999999999999988 777 33444    4


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      +.++|+.++.      .+..++...+. ++||.+.+|..+.. +++|+++.  ++++++++++++|+++++++.
T Consensus       299 ~~~~~~~~~~------~~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~  364 (384)
T 3zrp_A          299 NTVTGVILKV------ADPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG  364 (384)
T ss_dssp             SSEEEEECSS------SCHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred             ccEEEEECCC------CCHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence            6777888763      25667777765 45999999875443 89999985  689999999999999998754

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=100.00  E-value=8.6e-34  Score=264.76  Aligned_cols=329  Identities=10%  Similarity=0.098  Sum_probs=234.2

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      .+.+++|+.+.+     .++++.+++++.+.... ....|+......++++.+++++    |   .++++++++|+++++
T Consensus         6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~   72 (356)
T 1v72_A            6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN   72 (356)
T ss_dssp             CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred             CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence            456889998863     45679999999887542 2235654444566666666665    3   345699999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHH--HHhC--CCeEEEeeccCCCCCCCChhHHHh-hcCC-------CceEEEecC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELS--AAFR--HIEVRHFDLLPDKGWEVDLDDIES-LADQ-------NTVALVIIN  181 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~--~~~~--g~~~~~~~~~~~~~~~~~~~~l~~-~~~~-------~~~~v~i~~  181 (415)
                      .+++.++.++||.|+++.|+|......  +...  |.+++.++.+   ++.+|+++|++ ++++       ++++|++++
T Consensus        73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~  149 (356)
T 1v72_A           73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ  149 (356)
T ss_dssp             HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred             HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence            999999999999999999999876655  6666  9999888763   35789999999 8875       578899999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCccc--CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      |+| ||.+++.+++++|+++|++||+++|+|++|..+..  .+.....+ .+..... +++.|+||+ +.+ ...||+++
T Consensus       150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~~-~G~g~~~~  224 (356)
T 1v72_A          150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GVL-AAEAIVLF  224 (356)
T ss_dssp             SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TCS-SCEEEEES
T ss_pred             CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CCc-CccEEEEE
Confidence            987 99999999999999999999999999999976431  12211111 1111122 345589998 432 22347776


Q ss_pred             eCCCCCCChHHHHHHHHhhccccC---CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC
Q 014936          260 TDPCGMFRKPKVVERMKKYFDILG---DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE  336 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  336 (415)
                      ++        ++++.+........   ......+.++...++.   ..+.+..++++++++++.+.|++++++. +..|.
T Consensus       225 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~  292 (356)
T 1v72_A          225 NT--------SLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD---DLWLRNARKANAAAQRLAQGLEGLGGVE-VLGGT  292 (356)
T ss_dssp             SG--------GGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHTTCTTEE-EESCC
T ss_pred             CH--------HHHhhHHHHhhccCchhhhHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhCCCcE-EccCC
Confidence            43        45555544321111   1122333334455543   3445567788899999999999887887 43677


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +++++|++++          .++...+ .++||.+.||. |+ .+++|++++  ++++++++++++|++++++.
T Consensus       293 ~~~~~~~~~~----------~~~~~~l-~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~  353 (356)
T 1v72_A          293 EANILFCRLD----------SAMIDAL-LKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRT  353 (356)
T ss_dssp             CSSEEEEEEC----------HHHHHHH-HHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred             CccEEEEEcC----------HHHHHHH-HhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence            8889998774          2566666 56799999987 55 789999985  58999999999999887653

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=100.00  E-value=7.9e-33  Score=263.39  Aligned_cols=320  Identities=12%  Similarity=0.015  Sum_probs=238.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANI  127 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~i~~g~~~al~~~~~~l~~~gd~v  127 (415)
                      .++++.+.+++.+.+.    ..|.+  .....++++.+++++      +.+.++ +++++|+++++..++.++.++||+|
T Consensus        22 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~V   91 (411)
T 3nnk_A           22 INADPRVLRAMSSQLI----GQYDPAMTHYMNEVMALYRGVF------RTENRWTMLVDGTSRAGIEAILVSAIRPGDKV   91 (411)
T ss_dssp             CCCCHHHHHHHTSCCC----CTTCHHHHHHHHHHHHHHHHHH------TCCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhhcccc----ccccHHHHHHHHHHHHHHHHHh------CCCCCcEEEECCCcHHHHHHHHHHhcCCCCEE
Confidence            5677888888765431    12221  122356677777776      334554 7889999999999999999999999


Q ss_pred             EEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       128 i~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +++.|+|++  +...++..|.+++.++.+  .++.+|+++|++++++ ++++|++++|+||||.+.+   +++|+++|++
T Consensus        92 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~  166 (411)
T 3nnk_A           92 LVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRR  166 (411)
T ss_dssp             EEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             EEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHH
Confidence            999999987  888889999999999874  3456899999999976 8999999999999999977   6788888999


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-----
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-----  279 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----  279 (415)
                      +|+++|+|++++....    ...+...   ...+++.|+||++. ++.++|++++++        ++.+.+....     
T Consensus       167 ~~~~li~Dea~~~~~~----~~~~~~~---~~d~~~~s~~K~l~-~~~g~g~~~~~~--------~~~~~~~~~~~~~~~  230 (411)
T 3nnk_A          167 YDALFYTDATASLGGN----PLETDVW---GLDAVSAGMQKCLG-GPSGTSPITLSA--------RMEEAIRRRKCVEEG  230 (411)
T ss_dssp             HTCEEEEECTTTBTTB----CCCTTTT---TCSEEECCSTTTTC-CCSSEEEEEECH--------HHHHHHHTTCCCCGG
T ss_pred             cCCEEEEECCcccCCc----ccchhcc---CCcEEEecCccccC-CCCceEEEEECH--------HHHHHHhhccccccc
Confidence            9999999999876321    1122222   23488999999732 333589999865        5666665432     


Q ss_pred             --------------------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          280 --------------------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       280 --------------------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                                                      ...++.+...+.++..+++...+..+++..++++++++++.+.|+++ 
T Consensus       231 ~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-  309 (411)
T 3nnk_A          231 IRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-  309 (411)
T ss_dssp             GCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             ccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-
Confidence                                            11245566777777666654322337888899999999999999987 


Q ss_pred             CCcCCCCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHH
Q 014936          328 CISCPHKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRI  401 (415)
Q Consensus       328 ~~~~~~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l  401 (415)
                      ++..+ .+.+   +.++++.++..     .+..++...+++++||.+.+|......+++||++ +  ++++++++++++|
T Consensus       310 g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l  383 (411)
T 3nnk_A          310 GLETF-GDLKHKMNNVLGVVIPQG-----INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSAL  383 (411)
T ss_dssp             TCCBC-SCGGGBCSSEEEEECCTT-----CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHH
T ss_pred             CCEeC-CCcccccccEEEEECCCC-----CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHH
Confidence            77733 4433   67788887531     2567777777666799999986554568999998 4  4789999999999


Q ss_pred             HHHHHHH
Q 014936          402 KSFYQRH  408 (415)
Q Consensus       402 ~~~~~~~  408 (415)
                      +++++++
T Consensus       384 ~~~l~~~  390 (411)
T 3nnk_A          384 EAVLNYL  390 (411)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHc
Confidence            9998764

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=100.00  E-value=7.5e-33  Score=258.64  Aligned_cols=331  Identities=13%  Similarity=0.064  Sum_probs=237.4

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      .+.+++|+.+.+     .++++.+++++.+.+.     .|....|..++++.+++++.+.+|  .+++++++|+|+++++
T Consensus        12 ~p~~i~l~~~~~-----~~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~   79 (359)
T 1svv_A           12 KPKPYSFVNDYS-----VGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN   79 (359)
T ss_dssp             ---CEECSCSCS-----SCCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred             CCeeEEecCCCc-----CCCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence            345799998653     2567999999998865     355555667888888888877666  5678999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHH--HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC-------ceEEEecCCCC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN-------TVALVIINPGN  184 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~v~i~~p~n  184 (415)
                      ..++.++.++||+|+++.|+|+++..  .++..|.+++.++.+   ++.+|+++|++.++++       ++++++++| |
T Consensus        80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~  155 (359)
T 1svv_A           80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T  155 (359)
T ss_dssp             HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred             HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence            99999999999999999999998877  478889999999863   5679999999988765       788999999 7


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  263 (415)
                      |||.++|.+++++|+++|+++|+++|+||+|..+.++..+. ....+.. ....++..|++|. +.+ ...|++++++  
T Consensus       156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~--  230 (359)
T 1svv_A          156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND--  230 (359)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--
T ss_pred             CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--
Confidence            99999999999999999999999999999995432221111 1111000 0012677789997 332 4579988854  


Q ss_pred             CCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE
Q 014936          264 GMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA  340 (415)
Q Consensus       264 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~  340 (415)
                            ++++.+...   .......+.....++..+++.   ..+++..++++++++++.+.| +.+++. +..|.++++
T Consensus       231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~~~~~~~~  299 (359)
T 1svv_A          231 ------ALKPNARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIR-LAWPSASNQ  299 (359)
T ss_dssp             ------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCC-BSSCCSSSE
T ss_pred             ------cHHHHHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeE-EccCCccce
Confidence                  233333322   111111122223334455654   346788899999999999999 556887 446788889


Q ss_pred             EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      +|++++          .++...+++++||.+.+.. ...++++|++++  .+++++++++++|++++++
T Consensus       300 ~~~~~~----------~~~~~~l~~~~gi~v~~~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~  357 (359)
T 1svv_A          300 LFPILE----------NTMIAELNNDFDMYTVEPL-KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAS  357 (359)
T ss_dssp             ECBEEE----------HHHHHHHTTTEECEEEEEE-TTTEEEEEEECCTTCCHHHHHHHHHHHHHC---
T ss_pred             EEEEcC----------HHHHHHHHHhcCEEEEecc-cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhc
Confidence            887663          3566666555599984311 123578999884  6899999999999988765

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.2e-33  Score=262.90  Aligned_cols=327  Identities=12%  Similarity=0.109  Sum_probs=239.6

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCC----CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYA----PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      +.+.|+.+.+.     ++++.+++++.+.+.....   ..|+    ...+..++|+.+++++      ++++++|++|+|
T Consensus        26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g   94 (406)
T 3cai_A           26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD   94 (406)
T ss_dssp             SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred             CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence            46888887642     5678999999998764211   1232    1245688999999998      456789999999


Q ss_pred             hHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHHh----CCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC
Q 014936          109 CTQAIDVAMALL---SRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN  181 (415)
Q Consensus       109 ~~~al~~~~~~l---~~~gd~vi~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~  181 (415)
                      +++++.+++.++   .++||+|+++.|+|+++...+..    .|.+++.+++++ .++.+|+++|++.+++++++|++++
T Consensus        95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~  173 (406)
T 3cai_A           95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVNS  173 (406)
T ss_dssp             HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEES
T ss_pred             hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEeC
Confidence            999999999987   68999999999999986655443    699999998763 3456899999999988899999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE-EEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG-WFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~  260 (415)
                      |+||||.+++   +++|.++|+++|+++|+|++|+...    ....+..++   ..+++.|+||.++ ++  +| |++++
T Consensus       174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~~---~d~~~~s~~K~~g-~~--~G~~~~~~  240 (406)
T 3cai_A          174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY----RLLDIRETD---ADVVTVNAHAWGG-PP--IGAMVFRD  240 (406)
T ss_dssp             BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT----CCCCHHHHC---CSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred             CcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCCCchhcC---CCEEEeehhhhcC-CC--cCeEEEEe
Confidence            9999999987   6788888899999999999998522    112222333   3488899999864 44  89 99886


Q ss_pred             CCCCCCChHHHHHHHHhhcc----------ccCCchhHHHHHHHHhhCCCcH--------------HHHHHHHHHHHHHH
Q 014936          261 DPCGMFRKPKVVERMKKYFD----------ILGDPATFIQAAVPSILQQPDE--------------VFFKKTLNLLKQSV  316 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~a~~~~l~~~~~--------------~~~~~~~~~~~~~~  316 (415)
                      +        ++.+.++....          ..++.+...+.++..+++....              .++++..+++++++
T Consensus       241 ~--------~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (406)
T 3cai_A          241 P--------SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVF  312 (406)
T ss_dssp             H--------HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             h--------HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHH
Confidence            4        56655543321          1244566555554444432110              15788889999999


Q ss_pred             HHHHHHhhcCCCCcCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC------CCCC---CCeEEE
Q 014936          317 DICYNKIKEIPCISCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT------AVGL---KNWLRV  385 (415)
Q Consensus       317 ~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------~~~~---~~~iRi  385 (415)
                      +++.+.|++++++. +..|.  .+.++++.++.      .+..++...+ .++||.+.+|.      .++.   .+++|+
T Consensus       313 ~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~~~~iRi  384 (406)
T 3cai_A          313 DYLMVSLRSLPLVM-LIGRPEAQIPVVSFAVHK------VPADRVVQRL-ADNGILAIANTGSRVLDVLGVNDVGGAVTV  384 (406)
T ss_dssp             HHHHHHHHTCTTEE-ECCCCSSBCSEEEEEETT------BCHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTTTCCEEE
T ss_pred             HHHHHHHhcCCCeE-EcCCccccCCEEEEEECC------cCHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCCCCeEEE
Confidence            99999999988877 33443  23367777652      1456666666 56799999987      3332   478999


Q ss_pred             Eee--CChhhHHHHHHHHHH
Q 014936          386 TFA--VDPYSLEECLDRIKS  403 (415)
Q Consensus       386 ~~~--~~~~~l~~~l~~l~~  403 (415)
                      +++  .++++++.++++|++
T Consensus       385 s~~~~~t~e~i~~~~~~l~~  404 (406)
T 3cai_A          385 GLAHYSTMAEVDQLVRALAS  404 (406)
T ss_dssp             ECCTTCCHHHHHHHHHHHHT
T ss_pred             EeecCCCHHHHHHHHHHHHH
Confidence            996  478999999999875

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=7.2e-34  Score=269.37  Aligned_cols=330  Identities=12%  Similarity=0.123  Sum_probs=233.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +++.++||+.+......++ .++.+.+++.+.+......  .|+ .....++++.+++++    |    .+++++++|++
T Consensus        38 ~g~~~ld~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----g----~~~v~~~~gg~  107 (397)
T 2ord_A           38 KGNAYLDFTSGIAVNVLGH-SHPRLVEAIKDQAEKLIHCSNLFW-NRPQMELAELLSKNT----F----GGKVFFANTGT  107 (397)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCCTTSE-EHHHHHHHHHHHHTT----T----SCEEEEESSHH
T ss_pred             CCCEEEECCccccccccCC-CCHHHHHHHHHHHHhcccCccccC-CHHHHHHHHHHHHhc----C----CCeEEEeCCHH
Confidence            3677899988731111122 5789999999988653211  121 122344555555544    3    58999999999


Q ss_pred             HHHHHHHHHhcC------C-CCEEEEcCCCCcchHH-HHHhCCCe------------EEEeeccCCCCCCCChhHHHhhc
Q 014936          111 QAIDVAMALLSR------P-GANILLPRPGFPIYEL-SAAFRHIE------------VRHFDLLPDKGWEVDLDDIESLA  170 (415)
Q Consensus       111 ~al~~~~~~l~~------~-gd~vi~~~p~y~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~  170 (415)
                      +++..+++++..      + ++.|++.+|+|++... .+...|.+            +..++.       .|+++|++.+
T Consensus       108 ~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l  180 (397)
T 2ord_A          108 EANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKM  180 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHh
Confidence            999999998863      4 4789999999976544 66667765            555543       2899999999


Q ss_pred             CCCceEEEecCCCCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC
Q 014936          171 DQNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV  249 (415)
Q Consensus       171 ~~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~  249 (415)
                      ++++++|++++|+||||. +++.+++++|+++|+++|+++|+||+|.++.+.+.. ..+..++...+++   ||||.++ 
T Consensus       181 ~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-  255 (397)
T 2ord_A          181 SEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-  255 (397)
T ss_dssp             CTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-
T ss_pred             hcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-
Confidence            888999999999999999 999999999999999999999999999976655532 2223333222233   7899987 


Q ss_pred             CCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC-
Q 014936          250 PGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP-  327 (415)
Q Consensus       250 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-  327 (415)
                      +|+|+||++++++        ++ .++.. ...+++.+++.+.++.++|+...+   ++..++++++++++.+.|++++ 
T Consensus       256 ~G~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~  323 (397)
T 2ord_A          256 GGVPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKE  323 (397)
T ss_dssp             TTSCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999762        33 33321 223456788888888888754221   3567778888888888887642 


Q ss_pred             CCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHH
Q 014936          328 CISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSF  404 (415)
Q Consensus       328 ~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~  404 (415)
                      ++..+ ..+..|.++|++++..     .+..++...++ ++||.+.|+.    ++++|+++  ..+++++++++++|+++
T Consensus       324 ~~~~~~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~  393 (397)
T 2ord_A          324 EYDVVADVRGMGLMIGIQFREE-----VSNREVATKCF-ENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKV  393 (397)
T ss_dssp             HCTTEEEEEEETTEEEEEECTT-----SCHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             hCCceEEEEEEeEEEEEEECCh-----HHHHHHHHHHH-HCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHH
Confidence            22211 1234567888887631     14667777765 4799999874    57999996  47899999999999988


Q ss_pred             HH
Q 014936          405 YQ  406 (415)
Q Consensus       405 ~~  406 (415)
                      ++
T Consensus       394 l~  395 (397)
T 2ord_A          394 LQ  395 (397)
T ss_dssp             HH
T ss_pred             Hh
Confidence            75

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=100.00  E-value=2.1e-33  Score=261.76  Aligned_cols=317  Identities=12%  Similarity=0.052  Sum_probs=235.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL  129 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~  129 (415)
                      .++++.+++++.+.+..   ..|+. ..+..++|+.++++++    ...+++++++|+|+++++..++.++.+  |+|++
T Consensus         9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~   79 (353)
T 2yrr_A            9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR--GPVLV   79 (353)
T ss_dssp             CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred             CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence            56788899888776653   22322 2346788888888873    222468899999999999999999876  89999


Q ss_pred             cCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936          130 PRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (415)
Q Consensus       130 ~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  206 (415)
                      +.++|+++  ...++..|.+++.++.++  ++.+|++++++.+++ +++++++++|+||||.+++   +++|.++|+++|
T Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~  154 (353)
T 2yrr_A           80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG  154 (353)
T ss_dssp             EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred             EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence            99999875  455677899999998753  456899999999877 7899999999999999987   668888899999


Q ss_pred             cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHh--------
Q 014936          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKK--------  277 (415)
Q Consensus       207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------  277 (415)
                      +++|+|++|+...    ...++..++.   .+++.|++|++ +.+|  +||+++++        ++++.++.        
T Consensus       155 ~~li~D~a~~~~~----~~~~~~~~~~---d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~~~  217 (353)
T 2yrr_A          155 ALFFLDAVTTLGM----LPFSMRAMGV---DYAFTGSQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYLDL  217 (353)
T ss_dssp             CEEEEECTTTTTT----SCCCHHHHTC---SEEECCTTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTTCH
T ss_pred             CeEEEEcCccccc----ccccccccCc---eEEEecCcccccCCCc--eEEEEECH--------HHHHHhccCCCccccH
Confidence            9999999997532    1222333332   37788999964 4456  79999865        45554430        


Q ss_pred             --------hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEEEEecCc
Q 014936          278 --------YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAVMLKLNL  347 (415)
Q Consensus       278 --------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~  347 (415)
                              .....++.+...+.++..+++...+..+++.+++++++++++.+.|+++ ++..+ .+.  .++++|++++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~  295 (353)
T 2yrr_A          218 ARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPY-PKASPLPTVLVVRPPE  295 (353)
T ss_dssp             HHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSSBCTTEEEEECCT
T ss_pred             HHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccc-cCccCCCeEEEEECCC
Confidence                    1122345677777777666654222337788899999999999999987 77733 343  56667787753


Q ss_pred             cccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHH-HHHHHHHHHHH
Q 014936          348 SLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLE-ECLDRIKSFYQ  406 (415)
Q Consensus       348 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~-~~l~~l~~~~~  406 (415)
                      .     .+..++...+. ++||.+.+|..|..++++|+++ . .++++++ +++++|+++++
T Consensus       296 ~-----~~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~  351 (353)
T 2yrr_A          296 G-----VDADRLVRALY-AEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALA  351 (353)
T ss_dssp             T-----CCHHHHHHHHH-HTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHH
T ss_pred             C-----CCHHHHHHHHH-HCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence            1     24667777665 5599999998777778999999 3 6788888 99999998765

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=100.00  E-value=3e-32  Score=259.77  Aligned_cols=320  Identities=13%  Similarity=0.061  Sum_probs=233.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCCcEE-EeCChHHHHHHHHHHhcCCCCEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVF-VTSGCTQAIDVAMALLSRPGANI  127 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~-i~~g~~~al~~~~~~l~~~gd~v  127 (415)
                      .++++++.+++.+    .....|++  .....++++.+++++      +++++.++ +++|+++++..++.++.++||+|
T Consensus        20 ~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~V   89 (416)
T 3isl_A           20 VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF------QTKNRWAYPIDGTSRAGIEAVLASVIEPEDDV   89 (416)
T ss_dssp             CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT------TCCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred             cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh------CCCCCcEEEecCcHHHHHHHHHHHhcCCCCEE
Confidence            4456777666544    22223332  123456666666666      34566665 88999999999999999999999


Q ss_pred             EEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       128 i~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +++.|+|++  +...++..|++++.++.+.  ++.+|+++|+++++ +++++|++++|+||||.+++   +++|+++|++
T Consensus        90 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~  164 (416)
T 3isl_A           90 LIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRT  164 (416)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHH
T ss_pred             EEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHH
Confidence            999999997  6778889999999999864  34689999999997 58899999999999999977   7788889999


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------  278 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------  278 (415)
                      +|+++|+|++|+....    ...+...+   ..+++.|+||++ .++.++|++++++        ++++.+...      
T Consensus       165 ~~~~li~D~a~~~~~~----~~~~~~~~---~d~~~~s~~K~l-~g~~g~g~~~~~~--------~~~~~~~~~~~~~~G  228 (416)
T 3isl_A          165 EDALFIVDAVATIGGC----EVKVDEWK---IDAAIGGTQKCL-SVPSGMAPITYNE--------RVADVIAARKKVERG  228 (416)
T ss_dssp             TTCEEEEECTTTTTTS----CCCTTTTT---CSEEECCSSSTT-CCCSSEEEEEECH--------HHHHHHHTC------
T ss_pred             cCCEEEEECCccccCC----CcchhhcC---CCEEEecCcccc-CCCCCeEEEEECH--------HHHHHhhcccccccc
Confidence            9999999999985332    11222222   348899999973 2334589999865        566655421      


Q ss_pred             ---------------------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936          279 ---------------------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       279 ---------------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                                                       ....++.+...+.++.++++...+..+++..++++++++++.+.|++
T Consensus       229 w~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~  308 (416)
T 3isl_A          229 IATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKA  308 (416)
T ss_dssp             ------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence                                             11133556677777767765422222788999999999999999998


Q ss_pred             CCCCcCCCCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhh-HHHHHH
Q 014936          326 IPCISCPHKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYS-LEECLD  399 (415)
Q Consensus       326 ~~~~~~~~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~-l~~~l~  399 (415)
                      + ++.++ .+.+   +.++++.++..     .+..++...+++++||.+.+|.....++++|+++ . .++++ ++++++
T Consensus       309 ~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~  381 (416)
T 3isl_A          309 M-GLRLF-GDDSCKMPVVTCVEIPGG-----IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLA  381 (416)
T ss_dssp             T-TCCBC-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred             c-CCEec-cCccccCCcEEEEeCCCC-----CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHH
Confidence            6 77733 4443   56788877531     2567787877666699999987655578999999 2 34555 999999


Q ss_pred             HHHHHHHHH
Q 014936          400 RIKSFYQRH  408 (415)
Q Consensus       400 ~l~~~~~~~  408 (415)
                      +|+++++++
T Consensus       382 ~l~~~~~~~  390 (416)
T 3isl_A          382 GLEAVLLRH  390 (416)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHc
Confidence            999998764

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=1.7e-32  Score=259.46  Aligned_cols=327  Identities=16%  Similarity=0.124  Sum_probs=239.0

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++||+.+.+....+. .+|.+.+++.+.+..... ..+.+.....++++.+++++        .++++++++|+++
T Consensus        34 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt~  104 (392)
T 3ruy_A           34 EGNRYMDLLSAYSAVNQGH-RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGAE  104 (392)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHHH
T ss_pred             CCCEEEEcCCChhhhccCC-CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHHH
Confidence            4778999998864322111 579999999998865322 11122345678888888887        3789999999999


Q ss_pred             HHHHHHHHhcCC----------CCEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCCCCCCChhHHHh
Q 014936          112 AIDVAMALLSRP----------GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIES  168 (415)
Q Consensus       112 al~~~~~~l~~~----------gd~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~  168 (415)
                      ++..+++.+..+          +|+|+++.|+|+++...+...+..             +..++.       .|+++|++
T Consensus       105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~  177 (392)
T 3ruy_A          105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA  177 (392)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence            999999987643          679999999998877666544322             333322       27999999


Q ss_pred             hcCCCceEEEecCCCCccccCCCHHH-HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc
Q 014936          169 LADQNTVALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW  247 (415)
Q Consensus       169 ~~~~~~~~v~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  247 (415)
                      ++++++++|++++|+||||.+++.++ +++|+++|++||+++|+||+|.++.+.+... .....+...+++   |+||.+
T Consensus       178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l  253 (392)
T 3ruy_A          178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL  253 (392)
T ss_dssp             HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred             HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence            99988999999999999999996555 9999999999999999999998776655432 222222222333   678984


Q ss_pred             CCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936          248 IVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       248 ~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                       .+| +|+||+++++        ++++.+.... ..+++.+++.+.++.++|+..  . .++..++++++++++.+.|++
T Consensus       254 -~gG~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~-~~~~~~~~~~~~~~l~~~L~~  321 (392)
T 3ruy_A          254 -GGGVFPISCAAANR--------DILGVFEPGSHGSTFGGNPLACAVSIAALEVL--E-EEKLTERSLQLGEKLVGQLKE  321 (392)
T ss_dssp             -GTTTSCCEEEEECH--------HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH--H-HTTHHHHHHHHHHHHHHHHTT
T ss_pred             -hCChhhhEEEEECH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH--H-hhhHHHHHHHHHHHHHHHHHH
Confidence             346 9999999865        5666655442 235677889999998888642  1 267788999999999999998


Q ss_pred             C--CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHH
Q 014936          326 I--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRI  401 (415)
Q Consensus       326 ~--~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l  401 (415)
                      +  +.+. . .+..|.++++.++.       +..++...++ ++||.+.|+.    .+++|+++  ..+++++++++++|
T Consensus       322 ~~~~~~~-~-~~~~g~~~~~~~~~-------~~~~l~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l  387 (392)
T 3ruy_A          322 IDNPMIT-E-VRGKGLFIGIELNE-------PARPYCEQLK-AAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKI  387 (392)
T ss_dssp             CCCTTEE-E-EEEETTEEEEEESS-------CSHHHHHHHH-TTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred             hcCCCce-E-EEeeeeEEEEEEcc-------hHHHHHHHHH-HCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHH
Confidence            7  2233 2 23345566666653       3566777664 6799999875    58999996  47899999999999


Q ss_pred             HHHH
Q 014936          402 KSFY  405 (415)
Q Consensus       402 ~~~~  405 (415)
                      ++++
T Consensus       388 ~~~l  391 (392)
T 3ruy_A          388 KAVL  391 (392)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8875

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=100.00  E-value=1.5e-32  Score=259.77  Aligned_cols=321  Identities=14%  Similarity=0.075  Sum_probs=237.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANIL  128 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi  128 (415)
                      .++++.+++++.+.+..   ..++. .....++++.++++++      .+.+ ++++|+|+++++..++.++.++||+|+
T Consensus        32 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl  102 (393)
T 3kgw_A           32 SNLAPRVLAAGSLRMIG---HMQKEMLQIMEEIKQGIQYVFQ------TRNPLTLVVSGSGHCAMETALFNLLEPGDSFL  102 (393)
T ss_dssp             CCCCHHHHHHTTCCCCC---TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEEE
T ss_pred             CCCCHHHHHHhcccccC---cccHHHHHHHHHHHHHHHHHhC------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEE
Confidence            56678888877653321   11111 1234567777777763      3333 699999999999999999999999999


Q ss_pred             EcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHHHHhhc
Q 014936          129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKL  205 (415)
Q Consensus       129 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~  205 (415)
                      ++.++|++  +...++..|.++..++.+.  ++.+|+++|++.+++ +++++++++|+||||.+++   +++|.++|+++
T Consensus       103 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~  177 (393)
T 3kgw_A          103 TGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRY  177 (393)
T ss_dssp             EEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred             EEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHc
Confidence            99988863  3667788999999998754  346899999999987 8999999999999999987   67888889999


Q ss_pred             CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-----
Q 014936          206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-----  279 (415)
Q Consensus       206 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----  279 (415)
                      |+++|+||+|+....    ...+...   ...+++.|+||++ +.+|  +||+++++        ++++.+....     
T Consensus       178 ~~~li~De~~~~g~~----~~~~~~~---~~d~~~~s~sK~~~~~~g--~g~~~~~~--------~~~~~~~~~~~~~~~  240 (393)
T 3kgw_A          178 QCLLLVDSVASLGGV----PIYMDQQ---GIDIMYSSSQKVLNAPPG--ISLISFND--------KAKYKVYSRKTKPVS  240 (393)
T ss_dssp             TCEEEEECTTTTTTS----CCCTTTT---TCCEEEEESSSTTCCCSS--CEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred             CCEEEEECCccccCc----ccchhhc---CCCEEEecCcccccCCCc--eeEEEECH--------HHHHHHhccCCCCCc
Confidence            999999999985321    1111122   2347888999975 3444  89999865        6777765421     


Q ss_pred             -------------------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----
Q 014936          280 -------------------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----  336 (415)
Q Consensus       280 -------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----  336 (415)
                                         ...++.+...+.++..+++...+..+++..++++++++++.+.|+++ ++..+ .+.    
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~  318 (393)
T 3kgw_A          241 FYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFF-VKDPEIR  318 (393)
T ss_dssp             STTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGB
T ss_pred             eeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhc
Confidence                               11235567777777667654333457888999999999999999988 77733 333    


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHHHHHHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      .+.++++.++..     .+..++...+++++||.+.+|..+...+++|+++ +  .+++++++++++|+++++++.
T Consensus       319 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~  389 (393)
T 3kgw_A          319 LPTITTVTVPAG-----YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCP  389 (393)
T ss_dssp             CSSEEEEECCTT-----BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred             CCeEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence            256677777531     2567777777666699999998776688999998 5  489999999999999987643

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=100.00  E-value=7.6e-32  Score=252.86  Aligned_cols=329  Identities=15%  Similarity=0.107  Sum_probs=222.4

Q ss_pred             Cc-ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           34 EK-KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        34 ~~-~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +. +++|++.+.+.    .++++.+++++.         .|..+   ..+++.++++..+.+|.. +++++++++|++++
T Consensus        26 g~~~v~~~~~~~~~----~~~~~~v~~a~~---------~~~~~---~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a   88 (374)
T 2aeu_A           26 GRDALYDLSGLSGG----FLIDEKDKALLN---------TYIGS---SYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA   88 (374)
T ss_dssp             CGGGCEECSSCCCC----CCCCHHHHHHHT---------STTHH---HHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred             CccceeeecccCCC----CCCCHHHHHHHH---------HhcCc---hHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence            55 78999988643    677898888875         12211   345556666555544532 35789999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE-EEecCCCCcccc
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA-LVIINPGNPCGN  188 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-v~i~~p~nptG~  188 (415)
                      +..++.++  +||+|+++.|+|+++..   .++..|++++.+         .|++++++. ++++++ |++++|+||||.
T Consensus        89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~  156 (374)
T 2aeu_A           89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI  156 (374)
T ss_dssp             HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred             HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence            99999988  99999999998877544   667789988876         278999988 778999 999999999996


Q ss_pred             CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       189 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                        +..++++|.++|+++|+++|+||+|+.+........+....+   ..++++|+||+  ++|+|+||+++++       
T Consensus       157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~---~di~~~S~sK~--l~g~~~G~~~~~~-------  222 (374)
T 2aeu_A          157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKL--MEGPRGGLLAGKK-------  222 (374)
T ss_dssp             --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSS--SSSCSCEEEEEEH-------
T ss_pred             --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccC---CcEEEecCccc--ccCcceEEEEECH-------
Confidence              669999999999999999999999987641000000011122   23888999998  4578999999865       


Q ss_pred             HHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH----HHHHHHHhhcC---CCCcCCCCCCCceE
Q 014936          269 PKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS----VDICYNKIKEI---PCISCPHKPEGSMA  340 (415)
Q Consensus       269 ~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~---~~~~~~~~p~~g~~  340 (415)
                       ++++.++.... ...+++++.+.++..+|+....+.+++..+..+..    ++.+.+.|..+   +++.+...|.+.++
T Consensus       223 -~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~  301 (374)
T 2aeu_A          223 -ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVI  301 (374)
T ss_dssp             -HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEE
T ss_pred             -HHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEE
Confidence             67787776543 23456788888888888754322333333333333    45566666554   24442224555555


Q ss_pred             EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-CCCeEEEEeeC-C--hhhHHHHHHHHHHHHHHH
Q 014936          341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-LKNWLRVTFAV-D--PYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~iRi~~~~-~--~~~l~~~l~~l~~~~~~~  408 (415)
                      .|..++...  +..++.+++..+++++||.+.||..|. ..+++||+++. +  +++++.+++.|+++++++
T Consensus       302 ~~~~~~~~~--~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~  371 (374)
T 2aeu_A          302 KRVYKDDTI--NIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMA  371 (374)
T ss_dssp             EEEESSHHH--HHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHH
T ss_pred             Eeecccccc--cccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHH
Confidence            554443100  000122366677788899999998763 35799999953 2  234666666666665543

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=2.9e-32  Score=260.98  Aligned_cols=352  Identities=14%  Similarity=0.064  Sum_probs=223.9

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++||+.+.+...  ++ .+|.+++++.+.+....  .|....+..+.++++++++.+..+  .+.++|++++|+++
T Consensus        27 ~g~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~e  100 (430)
T 3i4j_A           27 AGRRYLDGSSGALVAN--IGHGRAEVGERMAAQAARLP--FVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSE  100 (430)
T ss_dssp             TSCEEEETTHHHHTCT--TCBCCHHHHHHHHHHHHHCC--CCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHH
T ss_pred             CCCEEEECCCchhccc--cCCCCHHHHHHHHHHHHhcc--cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHH
Confidence            4778999998743222  33 38999999999887532  333334455666677777666554  56779999999999


Q ss_pred             HHHHHHHHhc--------CCCCEEEEcCCCCcchHHHHHhCCC---------------eEEEeeccCCCC---CCCChhH
Q 014936          112 AIDVAMALLS--------RPGANILLPRPGFPIYELSAAFRHI---------------EVRHFDLLPDKG---WEVDLDD  165 (415)
Q Consensus       112 al~~~~~~l~--------~~gd~vi~~~p~y~~~~~~~~~~g~---------------~~~~~~~~~~~~---~~~~~~~  165 (415)
                      ++..+++++.        .+++.|++.+|+|+++...+...+.               ++..++.+  +.   ...|+++
T Consensus       101 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  178 (430)
T 3i4j_A          101 ATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKP--DPARNGAEDAEG  178 (430)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCC--CTTSCHHHHHTH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCC--cccchhhHHHHH
Confidence            9999999886        3478999999999987765544433               22222221  11   1125688


Q ss_pred             HHhhcCC---CceEEEecCC-CC-cccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeE
Q 014936          166 IESLADQ---NTVALVIINP-GN-PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL  238 (415)
Q Consensus       166 l~~~~~~---~~~~v~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i  238 (415)
                      |++.++.   .+.++++++| +| ++|. .++.+++++|.++|++||+++|+||+|.++.+.+.. ..+..+ +...++ 
T Consensus       179 le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~di-  256 (430)
T 3i4j_A          179 LRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP-LALSRWSGVTPDI-  256 (430)
T ss_dssp             HHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTTCCCSE-
T ss_pred             HHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-hhhhhhcCCCCcE-
Confidence            8887762   4556666777 56 7886 578888999999999999999999999987765542 222233 222223 


Q ss_pred             EEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNL  311 (415)
Q Consensus       239 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~  311 (415)
                        .+|||+++. | +|+||+++++        ++++.+...     ...+++.+++++.++.++|+... ++..++.++.
T Consensus       257 --~t~sK~l~~-G~~r~G~~~~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~  325 (430)
T 3i4j_A          257 --AVLGKGLAA-GYAPLAGLLAAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKER  325 (430)
T ss_dssp             --EEECGGGTT-TSSCCEEEEECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred             --EEEcccccC-CccccEEEEECH--------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence              368999874 9 9999999865        788888752     23456789999999888886421 1334444444


Q ss_pred             HHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC----CCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEE
Q 014936          312 LKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD----IIDDIDFCFKLAKEESVIILPGTAVG---LKNWLR  384 (415)
Q Consensus       312 ~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~----~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iR  384 (415)
                      .+..++.+.+.+.++|++. . .+..|.|+++.+.......    .....++...++ ++||.+.|+..+.   ..+++|
T Consensus       326 ~~~~~~~l~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~~iR  402 (430)
T 3i4j_A          326 GAQLLAGLQALQARFPQMM-Q-VRGTGLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGAEPNGRGDHLL  402 (430)
T ss_dssp             HHHHHHHHHHHHHHCTTEE-E-EEEETTEEEEEEC------------CHHHHHHHHH-HTTEECC-----------CEEE
T ss_pred             HHHHHHHHHHHHHhCCCeE-E-EEEEEEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCCCEEE
Confidence            4444555555544566555 3 3445778887774211000    011245666654 6799999874322   157899


Q ss_pred             EEee--CChhhHHHHHHHHHHHHHHH
Q 014936          385 VTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       385 i~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      |+++  .+++++++++++|+++++++
T Consensus       403 i~~~~~~t~e~i~~~l~~l~~~l~~~  428 (430)
T 3i4j_A          403 LGPPLSITAAEVDGLLALLAGALEDV  428 (430)
T ss_dssp             ECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            9996  68999999999999998764

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=8.5e-32  Score=256.74  Aligned_cols=339  Identities=16%  Similarity=0.141  Sum_probs=228.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +++.++|++.+.+....+++.+|.+++++.+.+.....  |++..+..+++..+++.+.+..|... +++|++|+|++++
T Consensus        40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~--~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea  116 (419)
T 2eo5_A           40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAH--AAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEA  116 (419)
T ss_dssp             TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCC--CSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHH
T ss_pred             CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCcc--ccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHH
Confidence            46778999888743221122279999999999875321  22111222344444444444444322 7899999999999


Q ss_pred             HHHHHHHhcC-CCCEEEEcCCCCcchHHHHH-hCC-------------CeEEEeeccCCC--CCC------------CCh
Q 014936          113 IDVAMALLSR-PGANILLPRPGFPIYELSAA-FRH-------------IEVRHFDLLPDK--GWE------------VDL  163 (415)
Q Consensus       113 l~~~~~~l~~-~gd~vi~~~p~y~~~~~~~~-~~g-------------~~~~~~~~~~~~--~~~------------~~~  163 (415)
                      +..+++++.. +||+|++.+|+|+++...+. ..|             .++..++.+...  .|+            +|+
T Consensus       117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~  196 (419)
T 2eo5_A          117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVI  196 (419)
T ss_dssp             HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHH
Confidence            9999987653 48999999999987554332 211             245666653210  011            367


Q ss_pred             hHHH-hhcCC----CceEEEecCCC-Ccccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC
Q 014936          164 DDIE-SLADQ----NTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (415)
Q Consensus       164 ~~l~-~~~~~----~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  236 (415)
                      ++|+ +++++    ....+++++|+ ||||. +.+.+++++|+++|++||+++|+||+|.++.+.+.. ..+...+...+
T Consensus       197 ~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~~d  275 (419)
T 2eo5_A          197 EFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTVPD  275 (419)
T ss_dssp             HHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCS
T ss_pred             HHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCCCC
Confidence            8898 88763    23456777885 57896 678899999999999999999999999987655432 12222222233


Q ss_pred             eEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936          237 ILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS  315 (415)
Q Consensus       237 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  315 (415)
                      ++   ||||.|+. | +|+||+++++        +++ .+......+++.+++++.++.++|+.     +++..++++++
T Consensus       276 ~~---t~sK~~~~-G~~riG~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa~aal~~-----~~~~~~~~~~~  337 (419)
T 2eo5_A          276 VI---TLAKALGG-GIMPIGATIFRK--------DLD-FKPGMHSNTFGGNALACAIGSKVIDI-----VKDLLPHVNEI  337 (419)
T ss_dssp             EE---EECGGGGT-TTSCCEEEEEEG--------GGC-CC------CCCCCHHHHHHHHHHHHH-----HHHHHHHHHHH
T ss_pred             EE---EecccccC-CccceEEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHH
Confidence            33   79999874 9 9999999976        233 33112223567789999999999863     33377889999


Q ss_pred             HHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhh
Q 014936          316 VDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYS  393 (415)
Q Consensus       316 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~  393 (415)
                      ++++.+.|+++  +. . .+..|+|+|+++....    .... +...++ ++||.+.|+.    .+++||++  ..++++
T Consensus       338 ~~~l~~~L~~~--~~-~-~~~~g~~~~i~~~~~~----~~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e~  403 (419)
T 2eo5_A          338 GKIFAEELQGL--AD-D-VRGIGLAWGLEYNEKK----VRDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEEE  403 (419)
T ss_dssp             HHHHHHHHTTS--SS-E-EEEETTEEEEECSCHH----HHHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHHH
T ss_pred             HHHHHHHHHHh--hh-h-eEeeeEEEEEEEecCc----cHHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHH
Confidence            99999999876  33 2 3445778888883110    0133 666654 6799999874    57999987  468999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQR  407 (415)
Q Consensus       394 l~~~l~~l~~~~~~  407 (415)
                      +++++++|++++++
T Consensus       404 i~~~l~~l~~~l~~  417 (419)
T 2eo5_A          404 AKQGLDILKKVIKV  417 (419)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988764

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=100.00  E-value=1.4e-32  Score=255.75  Aligned_cols=326  Identities=18%  Similarity=0.158  Sum_probs=225.0

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +..+|+|+.+.+.     .+++.+++++.+.... . ..|.+..+..+||+++|++++        .+++++++|+++++
T Consensus         2 ~~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~-~-~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~   66 (347)
T 1jg8_A            2 PHMMIDLRSDTVT-----KPTEEMRKAMAQAEVG-D-DVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGN   66 (347)
T ss_dssp             ---CEECSCGGGC-----CCCHHHHHHHHTCCCC-C-GGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHH
T ss_pred             CceEEEeccccCC-----CCCHHHHHHHhcCCCC-C-cccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHH
Confidence            3457899999743     3568888888655322 1 256666788999999999983        35788889999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchH---HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN  184 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n  184 (415)
                      .+++.++.++||+|+++.|+|....   ..+...|++++.+ .+  .++.+|++++++++++      ++++|++++|+|
T Consensus        67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n  143 (347)
T 1jg8_A           67 QVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN  143 (347)
T ss_dssp             HHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred             HHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence            9999999999999999999997543   2567789998887 33  2345799999999875      588999999999


Q ss_pred             cc-ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc--cCCCCcccccccCCCCCeEEEccCccccCCCCceEEE-EEee
Q 014936          185 PC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHLV--FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW-FVTT  260 (415)
Q Consensus       185 pt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~  260 (415)
                      || |.++|.+++++|+++|+++|+++|+|++|..+.  +.+.....+.. . .+  .++.|+||+++++   +|| ++.+
T Consensus       144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~-~d--~~~~s~sK~l~~~---~G~~~~~~  216 (347)
T 1jg8_A          144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG-Y-AD--SVMFCLSKGLCAP---VGSVVVGD  216 (347)
T ss_dssp             TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH-T-CS--EEEEESSSTTCCS---SCEEEEEC
T ss_pred             ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc-c-cc--EEEEecccccCCC---ceEEEEcC
Confidence            99 999999999999999999999999999975421  11221111111 1 12  3345899997643   575 4443


Q ss_pred             CCCCCCChHHHHHHHHhhcc-cc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYFD-IL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +        ++++.+..... ..  ...+...+.++...|+... +.+    ++..++++.+.+.|+++ ++.+...|..
T Consensus       217 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~----~~~~~~~~~l~~~L~~~-~~~~~~~~~~  282 (347)
T 1jg8_A          217 R--------DFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DRL----KEDHENARFLALKLKEI-GYSVNPEDVK  282 (347)
T ss_dssp             H--------HHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TTH----HHHHHHHHHHHHHHHHH-TCBCCGGGCC
T ss_pred             H--------HHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HHH----HHHHHHHHHHHHHHHhc-CceeccCCCc
Confidence            2        56666554322 11  1223344444444454221 112    22334667777888776 6652223556


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++++|++++..   + .+..++...++ ++||.+.++.    .+++|+++.  .+++++++++++|++++++
T Consensus       283 ~~~~~~~~~~~---~-~~~~~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~  345 (347)
T 1jg8_A          283 TNMVILRTDNL---K-VNAHGFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRK  345 (347)
T ss_dssp             SSEEEEECTTS---S-SCHHHHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEcccc---c-CCHHHHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence            77899888631   1 24667777775 6799998753    478999984  5899999999999988764

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=100.00  E-value=2.9e-32  Score=255.28  Aligned_cols=329  Identities=11%  Similarity=0.097  Sum_probs=239.0

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-C-CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-T-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~-~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ++++|+.| |     .++++.+++++.+.+.    +.|+. . .+..++|+.++++++    ...+++++++|+|+++++
T Consensus         4 ~~~~~~~g-p-----~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~   69 (366)
T 1m32_A            4 NYLLLTPG-P-----LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAV   69 (366)
T ss_dssp             -CEECSSS-S-----CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHH
T ss_pred             ccccccCC-C-----cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHH
Confidence            36888888 3     3467888888876431    22321 1 678999999999983    112235899999999999


Q ss_pred             HHHHHHhcCCCCEEEEcC-CCCcc-hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC--CceEEEecCCCCccccC
Q 014936          114 DVAMALLSRPGANILLPR-PGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNV  189 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~-p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~  189 (415)
                      ..++.++.++||+|++.+ ++|+. +...+...|.++..++.+.  ++.+|+++|++++++  +++++++++|+||||.+
T Consensus        70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~  147 (366)
T 1m32_A           70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML  147 (366)
T ss_dssp             HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred             HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence            999999999999988776 55554 5567788899999998753  456899999998865  47889999999999999


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChH
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                      ++   +++|+++|+++|+++|+||+|+.+..    ...+...   +..+++.|+||+++. +.++||+++++        
T Consensus       148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~~K~~~~-~~g~G~~~~~~--------  208 (366)
T 1m32_A          148 NP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIAAL---HIDYLISSANKCIQG-VPGFAFVIARE--------  208 (366)
T ss_dssp             CC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTT---TCSEEEEESSSTTCC-CSSEEEEEEEH--------
T ss_pred             cC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccccc---CccEEEecCcccccC-CCceEEEEECH--------
Confidence            88   67888999999999999999986432    1122222   234889999997532 23479999975        


Q ss_pred             HHHHHHHhh-------------------ccccCCchhHHHHHHHHhhCCCcHHH-HHHHHHHHHHHHHHHHHHhhcCCCC
Q 014936          270 KVVERMKKY-------------------FDILGDPATFIQAAVPSILQQPDEVF-FKKTLNLLKQSVDICYNKIKEIPCI  329 (415)
Q Consensus       270 ~~~~~~~~~-------------------~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~  329 (415)
                      ++++.+...                   ....++.+...+.++.++++...+.. +++.+++++++++++.+.|+++ ++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~  287 (366)
T 1m32_A          209 QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GF  287 (366)
T ss_dssp             HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CC
Confidence            444433221                   00024567777777777775422121 6778899999999999999988 77


Q ss_pred             cCCCCC---CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          330 SCPHKP---EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       330 ~~~~~p---~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      .++ .|   ..++++|+.++..  .+ .+..++...++ ++||.+.+|..|. .+++|++++  .+++++++++++|+++
T Consensus       288 ~~~-~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~l~-~~gi~v~~~~~~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~  361 (366)
T 1m32_A          288 NTL-LDDELHSPIITAFYSPED--PQ-YRFSEFYRRLK-EQGFVIYPGKVSQ-SDCFRIGNIGEVYAADITALLTAIRTA  361 (366)
T ss_dssp             CBS-SCGGGBCSSEEEEECCCC--TT-CCHHHHHHHHH-HTTEECEECCCSS-SCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             eec-cCchhcCceEEEEEcCcc--CC-CCHHHHHHHHH-HCCEEEECCcCCC-CCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            733 43   3567889888631  01 24667777665 5599999998773 689999996  4789999999999887


Q ss_pred             HH
Q 014936          405 YQ  406 (415)
Q Consensus       405 ~~  406 (415)
                      ++
T Consensus       362 ~~  363 (366)
T 1m32_A          362 MY  363 (366)
T ss_dssp             CT
T ss_pred             HH
Confidence            64

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=100.00  E-value=1.2e-31  Score=252.27  Aligned_cols=331  Identities=15%  Similarity=0.114  Sum_probs=229.4

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      ..++|..|.      .++++.+++++.+.+..    .+.+  +..++.+.+.+++.+.+|.+.+.+.+++++|+++++.+
T Consensus        19 ~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~   86 (376)
T 3f0h_A           19 GMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEA   86 (376)
T ss_dssp             SCEECSSSS------CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHH
T ss_pred             CceeecCCC------CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHH
Confidence            446666663      56788888888665431    1211  22345555555555444433223455669999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          116 AMALLSRPGANILLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       116 ~~~~l~~~gd~vi~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ++.++.++||+|+++.|+|++..  ..+...|.++..++.+  .++.+|++++++.++++++++++++|+||||.++|  
T Consensus        87 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~--  162 (376)
T 3f0h_A           87 VVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD--  162 (376)
T ss_dssp             HHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC--
T ss_pred             HHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC--
Confidence            99999999999999999877644  3467789999988875  34678999999998888999999999999999988  


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                       +++|+++|+++|+++|+|++++.+...    ..+...+.   .+++.|+||+++ .+|  +|++++++        +++
T Consensus       163 -l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~~---d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~  224 (376)
T 3f0h_A          163 -TMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNECGA---DVMITGSQKVLACPPG--ISVIVLAP--------RGV  224 (376)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHTC---SEEEEETTTTTCCCSS--CEEEEECH--------HHH
T ss_pred             -HHHHHHHHHHcCCEEEEEcCccccCcc----ccccccCc---cEEEecCcccccCCCc--eEEEEECH--------HHH
Confidence             888999999999999999999874422    12222222   388889999987 566  67777754        566


Q ss_pred             HHHHhhcc------------------ccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936          273 ERMKKYFD------------------ILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPH  333 (415)
Q Consensus       273 ~~~~~~~~------------------~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  333 (415)
                      +.+.....                  ...+++...+.++.++++...+. .+++..++++++++++.+.|+++ ++... 
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-  302 (376)
T 3f0h_A          225 ERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELV-  302 (376)
T ss_dssp             HHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEEC-
T ss_pred             HHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccC-
Confidence            66653210                  12234443334444444322222 57888899999999999999987 55522 


Q ss_pred             CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHH
Q 014936          334 KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       334 ~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      .+.....++...+.    + .+..++...+++++||.+.+|......+++|+++.  .+++++++++++|++++++
T Consensus       303 ~~~~~~~~~~~~~~----~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~  373 (376)
T 3f0h_A          303 SESPANGVTSVHPT----T-ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR  373 (376)
T ss_dssp             CSSBBTTEEEEEES----S-SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred             ccccCceEEEEeCC----C-CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence            33222222221221    1 25677777776656999999854445689999994  6899999999999988753

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=100.00  E-value=4.2e-32  Score=258.76  Aligned_cols=335  Identities=16%  Similarity=0.129  Sum_probs=233.1

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +++.++||+.|......++ .+|.+.+++.+.+.....  +.. ....++++.+++.+.+..|    .+++++++|++++
T Consensus        55 ~g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA  126 (420)
T 2pb2_A           55 QGKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLWH--TSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEA  126 (420)
T ss_dssp             TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCCC--CCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHH
T ss_pred             CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhccc--ccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHH
Confidence            4678899988732111122 578999999999875321  111 1123455555555554443    5899999999999


Q ss_pred             HHHHHHHhcC-------CC-CEEEEcCCCCcchHHH-HHhCCCe------------EEEeeccCCCCCCCChhHHHhhcC
Q 014936          113 IDVAMALLSR-------PG-ANILLPRPGFPIYELS-AAFRHIE------------VRHFDLLPDKGWEVDLDDIESLAD  171 (415)
Q Consensus       113 l~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~~  171 (415)
                      +..+++++..       +| +.|++.+|+|+++... ....|.+            +..++.       .|+++|+++++
T Consensus       127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~  199 (420)
T 2pb2_A          127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMD  199 (420)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCC
T ss_pred             HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhc
Confidence            9999998865       67 4999999999876543 3444543            333332       37999999998


Q ss_pred             CCceEEEecCCCCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC
Q 014936          172 QNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP  250 (415)
Q Consensus       172 ~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  250 (415)
                      +++++|+++.++|++|. +++.+++++|.++|+++|+++|+||+|.++.+.+... .+..++...+++   ||||.++ +
T Consensus       200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~  274 (420)
T 2pb2_A          200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-G  274 (420)
T ss_dssp             TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-T
T ss_pred             cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-C
Confidence            88888888777888884 6999999999999999999999999998776655422 112222223333   6899987 8


Q ss_pred             CceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC---
Q 014936          251 GWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI---  326 (415)
Q Consensus       251 G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---  326 (415)
                      |+|+||+++++        ++++.+... ...+++.+++++.++.++|+...+   ++..++++++++++.+.|+++   
T Consensus       275 G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~  343 (420)
T 2pb2_A          275 GFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQ  343 (420)
T ss_dssp             TSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999965        455554432 123456788888888887764221   355677777777787777654   


Q ss_pred             -CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHH
Q 014936          327 -PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKS  403 (415)
Q Consensus       327 -~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~  403 (415)
                       |.+. . .+..|.+++++++...   ..+..++...++ ++||.+.|+.    ++++|+++  ..+++++++++++|++
T Consensus       344 ~~~~~-~-~~~~g~~~~v~~~~~~---~~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~  413 (420)
T 2pb2_A          344 FDIFS-D-IRGMGLLIGAELKPKY---KGRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ  413 (420)
T ss_dssp             HCCEE-E-EEEETTEEEEEECGGG---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeE-E-EEecceEEEEEECCCc---hHHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence             3333 2 2345778888876421   013566766665 5799999874    57999997  4789999999999999


Q ss_pred             HHHHH
Q 014936          404 FYQRH  408 (415)
Q Consensus       404 ~~~~~  408 (415)
                      +++++
T Consensus       414 ~l~~~  418 (420)
T 2pb2_A          414 AVGKV  418 (420)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            88764

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=1.9e-32  Score=259.35  Aligned_cols=336  Identities=18%  Similarity=0.142  Sum_probs=233.0

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      +++.++||+.+.+...  ++ +++.+++++.+.+.....  ..|+ .....++++.+++++      +++++++++++|+
T Consensus        43 ~g~~~ld~~~~~~~~~--~g~~~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~------~~~~~~v~~~~gg  113 (395)
T 1vef_A           43 EGNEYIDCVGGYGVAN--LGHGNPEVVEAVKRQAETLMAMPQTLP-TPMRGEFYRTLTAIL------PPELNRVFPVNSG  113 (395)
T ss_dssp             TSCEEEESSHHHHTCT--TCBTCHHHHHHHHHHHHHCCCCCTTSC-CHHHHHHHHHHHHTS------CTTEEEEEEESSH
T ss_pred             CCCEEEEccCcccccc--CCCCCHHHHHHHHHHHHhCCCCccccC-CHHHHHHHHHHHHhc------CCCcCEEEEcCcH
Confidence            3567889988853211  33 789999999998864321  1232 234455666666654      3467899999999


Q ss_pred             HHHHHHHHHHhc--CCCCEEEEcCCCCcch-HHHHHhCCCeEEE---eeccCCCC--CCCChhHHHhhcCCCceEEEecC
Q 014936          110 TQAIDVAMALLS--RPGANILLPRPGFPIY-ELSAAFRHIEVRH---FDLLPDKG--WEVDLDDIESLADQNTVALVIIN  181 (415)
Q Consensus       110 ~~al~~~~~~l~--~~gd~vi~~~p~y~~~-~~~~~~~g~~~~~---~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~  181 (415)
                      ++++.++++++.  .+||.|++.+|+|++. ...+...|.+...   .+...+..  ...|+++|++++++++++++++.
T Consensus       114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~  193 (395)
T 1vef_A          114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEP  193 (395)
T ss_dssp             HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECS
T ss_pred             HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeC
Confidence            999999998764  5789999999999764 4455656665211   11100000  01489999999988888777655


Q ss_pred             CCCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      ++||||.++ +.+++++|+++|+++|+++|+||+|+++.+.+... ++...+...+++   ||||.+++ |+|+||++++
T Consensus       194 ~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~  268 (395)
T 1vef_A          194 VQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMR  268 (395)
T ss_dssp             EETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEE
T ss_pred             ccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEeh
Confidence            578999864 68889999999999999999999999754444321 122222222233   78999876 8999999997


Q ss_pred             CCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCCCc
Q 014936          261 DPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP-HKPEGS  338 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g  338 (415)
                      +        ++++.+... ...+.+.+++.+.++.++|+...   -++..++++++++++.+.|++++. ..+ ..+..|
T Consensus       269 ~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~---~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g  336 (395)
T 1vef_A          269 E--------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLE---RTRLWERAAELGPWFMEKLRAIPS-PKIREVRGMG  336 (395)
T ss_dssp             H--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHH---HHTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEET
T ss_pred             H--------HHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEE
Confidence            5        566655442 12245678888888888876421   135678888999999999988732 211 134567


Q ss_pred             eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936          339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~  405 (415)
                      +++|++++.       +..++...+++++||.+.|+.    .+++||+++  .+++++++++++|++++
T Consensus       337 ~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          337 LMVGLELKE-------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             TEEEEEESS-------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEcC-------hHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            889988863       245677777636799999863    589999884  68999999999998765

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=100.00  E-value=1e-30  Score=246.89  Aligned_cols=314  Identities=13%  Similarity=0.112  Sum_probs=229.4

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCC
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG  133 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~  133 (415)
                      +.+++++.+.+..+.+ .|.+..+..++|+.++++++      . .+.|++++| ++++.+++.++ .++||+|+++.|+
T Consensus        17 ~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~------~-~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~   87 (388)
T 1b9h_A           17 DAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHG------A-AHALAVTNG-THALELALQVMGVGPGTEVIVPAFT   87 (388)
T ss_dssp             HHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTT------C-SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred             HHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhC------C-CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCc
Confidence            8999999999876433 45556788999999999983      2 255666655 89999999999 8999999999999


Q ss_pred             CcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcc
Q 014936          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (415)
Q Consensus       134 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De  213 (415)
                      |+++...++..|++++.++++++ ++.+|+++|++++++++++|+   |+||||.+.   ++++|.++|+++|+++|+|+
T Consensus        88 ~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~---~l~~i~~la~~~~~~li~D~  160 (388)
T 1b9h_A           88 FISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMA---DMDALAKISADTGVPLLQDA  160 (388)
T ss_dssp             CTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCC---CHHHHHHHHHHHTCCBCEEC
T ss_pred             cHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcC---CHHHHHHHHHHcCCEEEEec
Confidence            99999999999999999998653 467999999999987777655   999999995   57888888999999999999


Q ss_pred             ccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH--HHHHHhhcc----------
Q 014936          214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV--VERMKKYFD----------  280 (415)
Q Consensus       214 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~----------  280 (415)
                      +|+.+. +.+.   .+..++    .+.+.||||.++++|.|+||+++++..       +  .+.+.....          
T Consensus       161 a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  226 (388)
T 1b9h_A          161 AHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDGE-------TEKYETAFLRHSCGRPRDDRRY  226 (388)
T ss_dssp             TTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTTC-------HHHHHHHHHHTBTTCCTTCSSC
T ss_pred             chhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCHH-------HHHHHHHHHHHhCCCCccCccc
Confidence            998643 3222   222232    377889997766777899999987622       4  444432211          


Q ss_pred             ------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC-----CCCceEEEEecCccc
Q 014936          281 ------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK-----PEGSMAVMLKLNLSL  349 (415)
Q Consensus       281 ------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-----p~~g~~~~~~l~~~~  349 (415)
                            .+...++....++...++     ++++..++++++++++.+.|+++|++.....     +.+++++|+.++...
T Consensus       227 ~~~~~g~~~~~~~~~~a~~~~~~~-----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (388)
T 1b9h_A          227 FHKIAGSNMRLNEFSASVLRAQLA-----RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT  301 (388)
T ss_dssp             CCCSCCCBCBCBHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC
T ss_pred             eeecccccCCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC
Confidence                  011134444344333343     3667788888999999999998888773321     345789999886310


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----------------------------CCeEEEEee--C-ChhhHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL-----------------------------KNWLRVTFA--V-DPYSLEEC  397 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----------------------------~~~iRi~~~--~-~~~~l~~~  397 (415)
                         ..+..++...+ .++||.+.++.....                             .+.+|+++.  + ++++++.+
T Consensus       302 ---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~  377 (388)
T 1b9h_A          302 ---EERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHAT  377 (388)
T ss_dssp             ---HHHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHH
T ss_pred             ---cccHHHHHHHH-HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHH
Confidence               00244566665 467999987653210                             135999994  6 89999999


Q ss_pred             HHHHHHHHHH
Q 014936          398 LDRIKSFYQR  407 (415)
Q Consensus       398 l~~l~~~~~~  407 (415)
                      ++.|++++++
T Consensus       378 ~~~l~~~~~~  387 (388)
T 1b9h_A          378 AEIIADAVAR  387 (388)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            9999988753

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=100.00  E-value=2.5e-31  Score=248.53  Aligned_cols=327  Identities=11%  Similarity=0.034  Sum_probs=233.5

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      +.++|.-|.      .++++.+.+++.+.+.......+.......++.+.+.+++.+.+|.. +++++++|+|+++++.+
T Consensus         4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~   76 (362)
T 3ffr_A            4 NKIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWER   76 (362)
T ss_dssp             CCEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHH
T ss_pred             cceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHH
Confidence            346666553      45678888888887765431111112233355555555555555532 56789999999999999


Q ss_pred             HHHHhcCCCCEEEEcCCCCc-chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          116 AMALLSRPGANILLPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       116 ~~~~l~~~gd~vi~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      ++.++.++ +.+++..+.|. .+...++..|+++..++.+  .++.+|+++++  ++++++++++++|+||||.+++   
T Consensus        77 ~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---  148 (362)
T 3ffr_A           77 IIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP---  148 (362)
T ss_dssp             HHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---
T ss_pred             HHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---
Confidence            99999987 55555665665 2345677889999999874  34678999998  7778999999999999999987   


Q ss_pred             HHHHHHHHhhc-CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCCCChHHHH
Q 014936          195 LQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       195 l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++|+++|+++ |+++|+|++|+.+...    ..+..     ..+++.|+||+++ ++|  +|++++++        +++
T Consensus       149 l~~i~~la~~~p~~~li~D~a~~~~~~~----~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~~--------~~~  209 (362)
T 3ffr_A          149 VEDINTFRDKNKDALIFVDAVSSLPYPK----FDWTK-----IDSVFFSVQKCFGLPAG--LGVWILND--------RVI  209 (362)
T ss_dssp             HHHHTTSGGGSTTSEEEEECTTTTTSSC----CCTTS-----CSEEEEETTSTTCCCSC--CEEEEEEH--------HHH
T ss_pred             HHHHHHHHHhCCCCEEEEecccccCCcc----cChhH-----CcEEEEecccccCCCCc--eEEEEECH--------HHH
Confidence            77788889999 9999999999864321    11111     2378899999987 677  56677754        565


Q ss_pred             HHHHhhcc----------------------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936          273 ERMKKYFD----------------------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS  330 (415)
Q Consensus       273 ~~~~~~~~----------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  330 (415)
                      +.+.....                      ..++++...+.++..+++......+++..++++++++++.+.|+++|++.
T Consensus       210 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~  289 (362)
T 3ffr_A          210 EKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS  289 (362)
T ss_dssp             HHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred             HHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence            55554321                      13456667777776666532223378888999999999999999998887


Q ss_pred             CCCCC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          331 CPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       331 ~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      .+ .|    ..+.++|+.++.       +..++...+.+ +||.+.+|..+..++++|++++  .++++++.+++.|+++
T Consensus       290 ~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~-~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~  360 (362)
T 3ffr_A          290 FG-VEDAKLRSMTTIVANTTM-------LPGEINKILEP-FDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK  360 (362)
T ss_dssp             ES-SSCGGGBCSSEEEEEESS-------CHHHHHHHHGG-GTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             ec-cCChhhcCCceEEEecCC-------CHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence            43 32    235677777753       46677777654 5999999876666789999995  5789999999998875


Q ss_pred             H
Q 014936          405 Y  405 (415)
Q Consensus       405 ~  405 (415)
                      +
T Consensus       361 ~  361 (362)
T 3ffr_A          361 I  361 (362)
T ss_dssp             T
T ss_pred             h
Confidence            3

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=100.00  E-value=3.1e-31  Score=255.86  Aligned_cols=322  Identities=15%  Similarity=0.120  Sum_probs=223.6

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcC
Q 014936           52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR  131 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~  131 (415)
                      ++.+.+.+++.    .. ...|.+..+..+||+++++++        ..+++++++|+++++..++.++.++||  +++.
T Consensus        55 ~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~--------~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~  119 (456)
T 2ez2_A           55 AMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELF--------GFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAG  119 (456)
T ss_dssp             CCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHH--------CCSEEEEESSHHHHHHHHHHHHCCTTC--EEEE
T ss_pred             cCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHh--------CCCcEEEeCCcHHHHHHHHHHhCCCCC--Eecc
Confidence            44566666664    22 235777778899999999998        345899999999999999999999999  7888


Q ss_pred             CCC-cchHHHHHhCCCeEEEeeccC----CC----CCCCChhHHHhhcCCCc----eEEEecCCCC-ccccCCCHHHHHH
Q 014936          132 PGF-PIYELSAAFRHIEVRHFDLLP----DK----GWEVDLDDIESLADQNT----VALVIINPGN-PCGNVYSYQHLQK  197 (415)
Q Consensus       132 p~y-~~~~~~~~~~g~~~~~~~~~~----~~----~~~~~~~~l~~~~~~~~----~~v~i~~p~n-ptG~~~~~~~l~~  197 (415)
                      |+| ..+...+...|.+++.+++++    ++    ++.+|+++|++++++++    +++++++|+| |||.+++.+++++
T Consensus       120 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~  199 (456)
T 2ez2_A          120 NMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRA  199 (456)
T ss_dssp             SSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred             ccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHH
Confidence            999 677888899999999988763    12    36789999999887655    8889999998 9999999999999


Q ss_pred             HHHHHhhcCcEEEEccccCC----------cccCCCCccccc-ccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936          198 LAETANKLKTLVIADEVYGH----------LVFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF  266 (415)
Q Consensus       198 i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  266 (415)
                      |+++|++||+++|+||+|+.          ..+.+....++. .+....+++++ |++|. +++| +.||+++++     
T Consensus       200 i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~-----  271 (456)
T 2ez2_A          200 VRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND-----  271 (456)
T ss_dssp             HHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC-----
T ss_pred             HHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC-----
Confidence            99999999999999999986          334443211110 11111234555 77887 5566 789998843     


Q ss_pred             ChHHHHHHHHhhccc------cCCchhHHHHH-HHHhhCCCcHHHH-HHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936          267 RKPKVVERMKKYFDI------LGDPATFIQAA-VPSILQQPDEVFF-KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS  338 (415)
Q Consensus       267 ~~~~~~~~~~~~~~~------~~~~~~~~~~a-~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  338 (415)
                        +++++.+......      ..+.+.....+ +...++     .+ +...++.+++.+++.+.|++. ++. +..|.++
T Consensus       272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~~~  342 (456)
T 2ez2_A          272 --DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE-----AMQYEYIEHRVKQVRYLGDKLKAA-GVP-IVEPVGG  342 (456)
T ss_dssp             --HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHH-----HTCHHHHHHHHHHHHHHHHHHHHT-TCC-BCSSCCS
T ss_pred             --HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHH-----HhHHHHHHHHHHHHHHHHHHHhcC-CCc-cccCCCc
Confidence              2566665543211      11222222222 333332     22 344455566677788888775 776 4468889


Q ss_pred             eEEEEecCccccCCCCCHHHH-----HHHHHhhcCeEEEc-CCCC------------CCCCeEEEEee---CChhhHHHH
Q 014936          339 MAVMLKLNLSLLDDIIDDIDF-----CFKLAKEESVIILP-GTAV------------GLKNWLRVTFA---VDPYSLEEC  397 (415)
Q Consensus       339 ~~~~~~l~~~~~~~~~~~~~~-----~~~ll~~~gi~v~~-g~~~------------~~~~~iRi~~~---~~~~~l~~~  397 (415)
                      +++|+.+.... ++ .+..++     ...+++++||.+.+ |..|            ...+++||+++   .++++++++
T Consensus       343 ~~~~~~~~~~~-~~-~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~  420 (456)
T 2ez2_A          343 HAVFLDARRFC-EH-LTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVV  420 (456)
T ss_dssp             SEEEEEHHHHT-TT-SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHH
T ss_pred             eEEEEEhHHhc-CC-CChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHH
Confidence            99998763100 01 122233     56665778998765 4322            11378999996   689999999


Q ss_pred             HHHHHHHHHH
Q 014936          398 LDRIKSFYQR  407 (415)
Q Consensus       398 l~~l~~~~~~  407 (415)
                      +++|++++++
T Consensus       421 ~~~l~~~l~~  430 (456)
T 2ez2_A          421 ADGIIKLYQH  430 (456)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHhh
Confidence            9999998875

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=100.00  E-value=7.2e-32  Score=256.45  Aligned_cols=336  Identities=14%  Similarity=0.130  Sum_probs=236.4

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CcHH--HHH-----HHHHHHhhhCCCCCCCCcE
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---GLPL--TRR-----AIAEYLSRDLPYKLTPNDV  103 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~---g~~~--lr~-----~ia~~~~~~~~~~~~~~~i  103 (415)
                      .+++++|..|.+.      .++.+.+++.+.+.......|+...   |.+.  +++     .+++++    |  ++++++
T Consensus        22 ~~~~i~~~~~~~~------~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~----g--~~~~~i   89 (407)
T 2dkj_A           22 QREGLELIASENF------VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALF----G--AAWANV   89 (407)
T ss_dssp             HHTSEECCTTCCC------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEEC
T ss_pred             hhcceeeccCCCC------CCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHh----C--CCcceE
Confidence            3578999999843      2799999998887642234555432   4443  333     555555    3  445555


Q ss_pred             EEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHHHhCCCeEEEeeccC-CCCCCCChhHHHhhcCC-CceEEE
Q 014936          104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQ-NTVALV  178 (415)
Q Consensus       104 ~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~-~~~~v~  178 (415)
                      ++++| ++++..++.++.++||+|+++.|+|+.+.   ..+...|..+..++... .+++.+|++++++.+++ ++++++
T Consensus        90 ~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~  168 (407)
T 2dkj_A           90 QPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIV  168 (407)
T ss_dssp             CCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEE
T ss_pred             Eecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEE
Confidence            56665 56999999999999999999999999873   44445555333333321 13567999999998874 788888


Q ss_pred             ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      +++|+||  ...   ++++|.++|+++|+++|+||+|+. +.+.+.....+   .  ...++++|+||+  ++|+|+||+
T Consensus       169 ~~~p~~~--~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~  236 (407)
T 2dkj_A          169 AGASAYP--RFW---DFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLI  236 (407)
T ss_dssp             ECCSSCC--SCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEE
T ss_pred             EeccccC--CCC---CHHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEE
Confidence            8999998  443   388999999999999999999997 44443322111   1  135889999996  458889999


Q ss_pred             EeeCCCCCCChHHHHHHHHhhcc-c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          258 VTTDPCGMFRKPKVVERMKKYFD-I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ++++       +++++.+..... . ..++++....++.++++.....++++..++++++++++.+.|+++ ++.++..+
T Consensus       237 ~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  308 (407)
T 2dkj_A          237 LSND-------PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGG  308 (407)
T ss_dssp             EESC-------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGS
T ss_pred             EECC-------HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCC
Confidence            9863       257777765432 1 234444444455555543223677889999999999999999988 77733225


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC------CCCCeEEEEee------CChhhHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV------GLKNWLRVTFA------VDPYSLEECLDRIKS  403 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~~------~~~~~l~~~l~~l~~  403 (415)
                      ..++++|+.++...    .+..++...+ .++||.+.+|..+      ..++++|++++      .++++++.++++|++
T Consensus       309 ~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~  383 (407)
T 2dkj_A          309 TDNHLFLVDLRPKG----LTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDR  383 (407)
T ss_dssp             CSSSEEEEECGGGT----CCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHH
T ss_pred             CCceEEEEECcccC----CCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHH
Confidence            67889999886421    1355565555 6789999998753      23578999994      789999999999999


Q ss_pred             HHHH
Q 014936          404 FYQR  407 (415)
Q Consensus       404 ~~~~  407 (415)
                      ++++
T Consensus       384 ~~~~  387 (407)
T 2dkj_A          384 ALLE  387 (407)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            9887

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=100.00  E-value=5e-33  Score=263.80  Aligned_cols=338  Identities=14%  Similarity=0.083  Sum_probs=219.9

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCC----CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYA----PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      +.+..+.|+.+.+     .++++.+++++.+.+.....   ..|.    ......++++.+++++      +++++++++
T Consensus        17 ~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~   85 (400)
T 3vax_A           17 RGSHMTYLDAAAT-----TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIF   85 (400)
T ss_dssp             -----CCCCCCCC-----SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEE
T ss_pred             ccCCcEEecCCCC-----CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEE
Confidence            4556677776653     35678999999888753110   0111    1122456777777776      356789999


Q ss_pred             eCChHHHHHHHHHHhc----CCCC-EEEEcCCCCcchHHHHH---hCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          106 TSGCTQAIDVAMALLS----RPGA-NILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~----~~gd-~vi~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      |+|+++++.+++.++.    ++|| .|+++.++|+++...+.   ..|++++.++.++  ++.+|+++|+++++++++++
T Consensus        86 ~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v  163 (400)
T 3vax_A           86 TSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLV  163 (400)
T ss_dssp             ESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEE
T ss_pred             eCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEE
Confidence            9999999999999997    8999 99999999998766554   3699999998754  45689999999999899999


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      ++++|+||||.+++   +++|+++|+++|+++|+|++|+...    ....+..+    ..+++.|+||.++.+|  +|++
T Consensus       164 ~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~  230 (400)
T 3vax_A          164 SLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGAL  230 (400)
T ss_dssp             ECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEE
T ss_pred             EEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEE
Confidence            99999999999977   6788899999999999999998532    22222222    2388899999866555  6777


Q ss_pred             E-eeCCCCCCChHHHHHHHH----hhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          258 V-TTDPCGMFRKPKVVERMK----KYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       258 ~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      + ++++........+...+.    ......++.+...+.++..+++.. .+++++.+++++++++++.+.|+ .+++.+.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~  308 (400)
T 3vax_A          231 VTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVN  308 (400)
T ss_dssp             EECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC
T ss_pred             EEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe
Confidence            7 665210000000101000    011123455666776666666431 24578889999999999999998 7788733


Q ss_pred             CCCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEe-e-
Q 014936          333 HKPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTF-A-  388 (415)
Q Consensus       333 ~~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~-~-  388 (415)
                       .+.+   +.++++.++.      .+..++...+.  +||.+.+|..|..                   .+++||++ + 
T Consensus       309 -~~~~~~~~~~~~~~~~~------~~~~~l~~~L~--~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~  379 (400)
T 3vax_A          309 -GDQDHVVPHILNLSFED------VDAEAFLVTLK--DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPG  379 (400)
T ss_dssp             -SCTTSBCTTEEEEECTT------CCHHHHHHHHH--HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC
T ss_pred             -CCcccCCCCEEEEEeCC------CCHHHHHHHHh--cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCC
Confidence             4443   3466666652      24666766664  7999999875532                   38999999 6 


Q ss_pred             -CChhhHHHHHHHHHHHHHH
Q 014936          389 -VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       389 -~~~~~l~~~l~~l~~~~~~  407 (415)
                       .++++++.++++|++++++
T Consensus       380 ~~t~e~i~~~~~~l~~~~~~  399 (400)
T 3vax_A          380 QATDLDVEELARGVAKLKPS  399 (400)
T ss_dssp             --------------------
T ss_pred             CCCHHHHHHHHHHHHHHhcc
Confidence             5789999999999988754

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=100.00  E-value=3.7e-32  Score=260.54  Aligned_cols=349  Identities=13%  Similarity=0.031  Sum_probs=230.7

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +++.++||..+.+....+. .+|.+++++.+.+.....  ..|+     .++++.+++.+.+..+  +++++|++++|++
T Consensus        41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~~--~~~~~v~~~~gg~  112 (433)
T 1zod_A           41 DGRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDHLFSEML-----SRPVVDLATRLANITP--PGLDRALLLSTGA  112 (433)
T ss_dssp             TCCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCCTTCC-----CHHHHHHHHHHHHHSC--TTCCEEEEESCHH
T ss_pred             CCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCcccccccC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence            4667889977764322222 478999999998865321  1232     2344444444444443  4578999999999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCC------------CeEEEeeccC--CCCC--------CCChhHH
Q 014936          111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRH------------IEVRHFDLLP--DKGW--------EVDLDDI  166 (415)
Q Consensus       111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g------------~~~~~~~~~~--~~~~--------~~~~~~l  166 (415)
                      +++..+++.+.  ..+++|++.+|+|++....+....            ..+..++...  ...+        .+|++.|
T Consensus       113 ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l  192 (433)
T 1zod_A          113 ESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYA  192 (433)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHH
Confidence            99999998653  235799999999987665443221            1333333311  1111        1358999


Q ss_pred             HhhcCC---CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936          167 ESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (415)
Q Consensus       167 ~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (415)
                      ++.+++   ....+++++| +||||. +++.+++++|+++|++||+++|+||+|.++.+.+.. ..+...+...+   +.
T Consensus       193 e~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~~~~~~~~~d---i~  268 (433)
T 1zod_A          193 FDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FACQRDGVTPD---IL  268 (433)
T ss_dssp             HHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EE
T ss_pred             HHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hHHhhcCCCCC---EE
Confidence            988863   3344566778 588996 578899999999999999999999999987654431 11222222222   33


Q ss_pred             cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-c--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-D--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  318 (415)
                      |+||.|++ |+|+||+++++        ++++.+.... .  .+.+.+++++.++.++|+...+   +...+++++++++
T Consensus       269 s~sK~~~~-G~~ig~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~  336 (433)
T 1zod_A          269 TLSKTLGA-GLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDR  336 (433)
T ss_dssp             EECHHHHT-TSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHH
T ss_pred             EecccccC-CCCeeEEEEhH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHH
Confidence            89999876 99999999965        6777776531 1  3456788899888888753211   2345666666677


Q ss_pred             HHHHhhc----CCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eC
Q 014936          319 CYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AV  389 (415)
Q Consensus       319 l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~  389 (415)
                      +.+.|++    +|.+. . .+..|.|+|++++....   +......++...++ ++||.+.||..|+.++++||++  ..
T Consensus       337 l~~~l~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~  413 (433)
T 1zod_A          337 LRRGLLDLMERFDCIG-D-VRGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTV  413 (433)
T ss_dssp             HHHHHHHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTC
T ss_pred             HHHHHHHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCC
Confidence            7666654    34333 2 34457788887753110   00012456666665 6799999988766568999987  47


Q ss_pred             ChhhHHHHHHHHHHHHHHH
Q 014936          390 DPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       390 ~~~~l~~~l~~l~~~~~~~  408 (415)
                      +++++++++++|+++++++
T Consensus       414 t~~~i~~~l~~l~~~l~~~  432 (433)
T 1zod_A          414 SEDEIDLGLSLLGQAIERA  432 (433)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHh
Confidence            8999999999999988653

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=1.8e-31  Score=255.36  Aligned_cols=338  Identities=16%  Similarity=0.110  Sum_probs=231.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      +++.++|++.+.+....+. .+|.+++++.+.+.....   ..|+. ....++++.+++++      ++++++|++|+|+
T Consensus        41 ~g~~ylD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~~~~~~v~~~~gg  112 (429)
T 1s0a_A           41 DGRRLVDGMSSWWAAIHGY-NHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT------PQPLECVFLADSG  112 (429)
T ss_dssp             TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS------CTTCCEEEEESSH
T ss_pred             CCCEEEEcCccHhhccCCC-CCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC------CCCCCEEEEeCCH
Confidence            3667889988874322222 579999999998865321   13332 22356666777665      3578999999999


Q ss_pred             HHHHHHHHHHhc---C----CCCEEEEcCCCCcchHHHHHhC-C-------------CeEEEeeccC---CCCC-CCChh
Q 014936          110 TQAIDVAMALLS---R----PGANILLPRPGFPIYELSAAFR-H-------------IEVRHFDLLP---DKGW-EVDLD  164 (415)
Q Consensus       110 ~~al~~~~~~l~---~----~gd~vi~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~~~~  164 (415)
                      +++++.+++++.   +    +||+|++.+|+|+++...+... |             .++..++.+.   ++.+ .+|++
T Consensus       113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  192 (429)
T 1s0a_A          113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV  192 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred             HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence            999999998653   2    6899999999999865543221 1             1344444421   1123 47899


Q ss_pred             HHHhhcCC--CceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936          165 DIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (415)
Q Consensus       165 ~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  239 (415)
                      +|++++++  ....+++++|  +||||. ..+.+++++|+++|+++|+++|+||+|.++...+.. ..+...+...+++ 
T Consensus       193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~~~~~~~~~d~~-  270 (429)
T 1s0a_A          193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL-FACEHAEIAPDIL-  270 (429)
T ss_dssp             HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE-
T ss_pred             HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchH-HHhhhcCCCCCEE-
Confidence            99988863  2344566677  589996 567888999999999999999999999976554432 1222222222333 


Q ss_pred             EccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936          240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLL  312 (415)
Q Consensus       240 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  312 (415)
                        |+||.++ +| +|+||+++++        ++++.+...      ...+.+.+++++.++.++|+...+   +...+++
T Consensus       271 --t~sK~l~-~G~~~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~  336 (429)
T 1s0a_A          271 --CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQV  336 (429)
T ss_dssp             --EECGGGG-TSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHH
T ss_pred             --Eeccccc-CCCccceEEEeCH--------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHH
Confidence              7899976 58 9999999865        677777652      123456788899888888753111   2455777


Q ss_pred             HHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936          313 KQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--  387 (415)
Q Consensus       313 ~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--  387 (415)
                      +++++++.+.|+++   |++. . .+..|.++|++++..     .+..++...++ ++||.+.|+     .+++||++  
T Consensus       337 ~~~~~~l~~~L~~l~~~~~~~-~-~~~~g~~~~~~~~~~-----~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~  403 (429)
T 1s0a_A          337 ADIEVQLREQLAPARDAEMVA-D-VRVLGAIGVVETTHP-----VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPY  403 (429)
T ss_dssp             HHHHHHHHHHHGGGGGCTTEE-E-EEEETTEEEEEESSC-----BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCT
T ss_pred             HHHHHHHHHHHHHHhcCCCEE-E-EEEeeEEEEEEECCc-----ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCC
Confidence            77888888888765   4443 2 233467888887631     14566777665 679999874     37899996  


Q ss_pred             eCChhhHHHHHHHHHHHHHH
Q 014936          388 AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       388 ~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ..+++++++++++|++++++
T Consensus       404 ~~t~e~i~~~~~~l~~~~~~  423 (429)
T 1s0a_A          404 IILPQQLQRLTAAVNRAVQD  423 (429)
T ss_dssp             TCCHHHHHHHHHHHHHHTSS
T ss_pred             CCCHHHHHHHHHHHHHHHHh
Confidence            47899999999999988654

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=100.00  E-value=2e-31  Score=252.32  Aligned_cols=334  Identities=16%  Similarity=0.132  Sum_probs=229.4

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++||+.+.+...  ++ .+|.+++++.+.+....+ .|.  .+..++++++++++.+..+    ++++++++|+++
T Consensus        34 ~g~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~~-~~~--~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~e  104 (395)
T 3nx3_A           34 KAKKYLDFSSGIGVCA--LGYNHAKFNAKIKAQVDKLLH-TSN--LYYNENIAAAAKNLAKASA----LERVFFTNSGTE  104 (395)
T ss_dssp             TCCEEEESSHHHHTCT--TCBSCHHHHHHHHHHHTTCSC-CCT--TSBCHHHHHHHHHHHHHHT----CSEEEEESSHHH
T ss_pred             CCCEEEECCCcHHhcc--CCCCCHHHHHHHHHHHHhccc-ccc--ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHH
Confidence            4778999998853211  33 579999999998875322 221  1223444444444444333    689999999999


Q ss_pred             HHHHHHHHhc-------CCCCEEEEcCCCCcchHHHHHhCC-------------CeEEEeeccCCCCCCCChhHHHhhcC
Q 014936          112 AIDVAMALLS-------RPGANILLPRPGFPIYELSAAFRH-------------IEVRHFDLLPDKGWEVDLDDIESLAD  171 (415)
Q Consensus       112 al~~~~~~l~-------~~gd~vi~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~l~~~~~  171 (415)
                      ++..+++++.       .+++.|++.+|+|+++...+...+             .++..++.       .|+++|+++++
T Consensus       105 a~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~  177 (395)
T 3nx3_A          105 SIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVN  177 (395)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhcc
Confidence            9999998875       357999999999998765544333             23333332       27999999998


Q ss_pred             CCceEEEecCCCCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC
Q 014936          172 QNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP  250 (415)
Q Consensus       172 ~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~  250 (415)
                      ++++++++..++|++|.+ ++.+.+++|.++|++||+++|+||+|.++...+... .....+..   ..+.|+||.++. 
T Consensus       178 ~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~---~d~~t~sK~~~~-  252 (395)
T 3nx3_A          178 EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQIL---PDIMTSAKALGC-  252 (395)
T ss_dssp             TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCC---CSEEEECGGGTT-
T ss_pred             CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCCC---CCEEEecccccC-
Confidence            888877777777777766 788889999999999999999999999876544321 12222222   223478999875 


Q ss_pred             CceEEEEEeeCCCCCCChHHH-HHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          251 GWRLGWFVTTDPCGMFRKPKV-VERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       251 G~r~G~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                      |+|+||+++++        ++ ++.+.... ..++..+++++.++.++|+... +++.++..+..+..++.+.+.+.++|
T Consensus       253 G~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  324 (395)
T 3nx3_A          253 GLSVGAFVINQ--------KVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFD  324 (395)
T ss_dssp             TSCCEEEEECH--------HHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             CCceEEEEEch--------hhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            89999999865        56 66665542 2356778899988888886321 13333444444444444444444455


Q ss_pred             CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936          328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       328 ~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~  405 (415)
                      .+. . .+..|.++|+.++..     .+..++...+ .++||.+.|+.    .+++||++  ..+++++++++++|++++
T Consensus       325 ~~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l  392 (395)
T 3nx3_A          325 FCK-K-RKGLGFMQGLSLDKS-----VKVAKVIQKC-QENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKAL  392 (395)
T ss_dssp             TEE-E-EEEETTEEEEEECTT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             CeE-E-EEeEEEEEEEEeCCc-----chHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence            444 2 345577888888642     2456666665 56799999875    58999987  468999999999999887


Q ss_pred             HH
Q 014936          406 QR  407 (415)
Q Consensus       406 ~~  407 (415)
                      ++
T Consensus       393 ~~  394 (395)
T 3nx3_A          393 KS  394 (395)
T ss_dssp             HT
T ss_pred             Hh
Confidence            53

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=100.00  E-value=6.9e-32  Score=259.51  Aligned_cols=355  Identities=14%  Similarity=0.048  Sum_probs=234.2

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++||..|.....  ++ .+|.+++++.+++....  .|....+..+.++++++++.+..+.. ..+++++|+|+++
T Consensus        62 ~G~~ylD~~~~~~~~~--lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGse  136 (453)
T 4ffc_A           62 DGNSFIDLGAGIAVTT--VGASHPAVAAAIADQATHFT--HTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAE  136 (453)
T ss_dssp             TSCEEEESSHHHHTCT--TCTTCHHHHHHHHHHHHHCS--CCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHH
T ss_pred             CCCEEEEcCCCcccCc--CCCCCHHHHHHHHHHHHhcc--ccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHH
Confidence            4677899988853211  33 48999999999887543  34433344566666666666655411 3579999999999


Q ss_pred             HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccC--CCCCCCC--------hhH
Q 014936          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLP--DKGWEVD--------LDD  165 (415)
Q Consensus       112 al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~~--------~~~  165 (415)
                      |++.+++.+..  .++.|++.+++|+++...+...+.              .+..++...  .+.++.+        ++.
T Consensus       137 A~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  216 (453)
T 4ffc_A          137 AVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISR  216 (453)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHH
Confidence            99999987652  458999999999987766544322              344444421  1112222        456


Q ss_pred             HHhhcCCCceEEEecCCCCccc--cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccC
Q 014936          166 IESLADQNTVALVIINPGNPCG--NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL  243 (415)
Q Consensus       166 l~~~~~~~~~~v~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~  243 (415)
                      |++.+.+.+.++++++|.|++|  ...+.+.+++|.++|++||+++|+||+|.++.+.+.. .....++..   ..+.+|
T Consensus       217 l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~a~~~~~~~---pdi~t~  292 (453)
T 4ffc_A          217 IETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAW-FASEHEGIV---PDIVTM  292 (453)
T ss_dssp             HHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCC---CSEEEE
T ss_pred             HHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccccc-chhhhcCCC---cchHhh
Confidence            6776766778889999988776  4558888999999999999999999999987655532 122222222   223478


Q ss_pred             ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHH
Q 014936          244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYN  321 (415)
Q Consensus       244 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~  321 (415)
                      ||.+++ |+|+||+++++        ++++.+.... ..+++.+++++.++.++|+...+ +..++..+..+..++.+.+
T Consensus       293 sK~~~~-G~~~G~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~  363 (453)
T 4ffc_A          293 AKGIAG-GMPLSAVTGRA--------ELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSA  363 (453)
T ss_dssp             CGGGGT-TSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhcC-CcCeEEEEECH--------HHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence            999866 89999999865        5766665442 34567889999999888864211 2233333333334444444


Q ss_pred             HhhcCCCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHH
Q 014936          322 KIKEIPCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEEC  397 (415)
Q Consensus       322 ~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~  397 (415)
                      .+.++|.+. . .+..|.++|+.+.....  +......++...+ .++||.+.|+..++  +++|+++  ..++++++++
T Consensus       364 ~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~--~~iRi~~~~~~t~e~i~~~  438 (453)
T 4ffc_A          364 LAEEVDIIG-E-VRGRGAMLAIEIVKPGTLEPDAALTKSIAAEA-LSQGVLILTCGTFG--NVIRLLPPLVIGDDLLDEG  438 (453)
T ss_dssp             HHHHCSSEE-E-EEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECCEECTTS--CEEEECCCTTCCHHHHHHH
T ss_pred             HHhhCCCeE-E-EEeeceEEEEEEecCcccCCCHHHHHHHHHHH-HhCCCEEecCCCCC--CEEEEECCCCCCHHHHHHH
Confidence            444555444 2 34557788887742100  0001234555555 56799999976543  7899987  4689999999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          398 LDRIKSFYQRHAK  410 (415)
Q Consensus       398 l~~l~~~~~~~~~  410 (415)
                      +++|+++++++.+
T Consensus       439 l~~l~~~l~~~~~  451 (453)
T 4ffc_A          439 ITALSDIIRAKAS  451 (453)
T ss_dssp             HHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999987543

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=100.00  E-value=2.3e-30  Score=245.17  Aligned_cols=317  Identities=13%  Similarity=0.118  Sum_probs=218.0

Q ss_pred             EecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHH
Q 014936           39 SLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA  116 (415)
Q Consensus        39 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~  116 (415)
                      +++.++|+........+++.+++...........|+  +.....++++.++++++      .  ++.+++++|++++..+
T Consensus        24 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~~   95 (398)
T 2rfv_A           24 TGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER------G--EAGLATASGISAITTT   95 (398)
T ss_dssp             TCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHH
T ss_pred             CCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHH
Confidence            577777764433344555666554211111222333  33456788888888872      2  3666677778999999


Q ss_pred             HHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          117 MALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       117 ~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +.++.++||+|+++.|+|+++...+    ...|.++..++.+       |++++++.++++++++++++|+||||.+++ 
T Consensus        96 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~-  167 (398)
T 2rfv_A           96 LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD-  167 (398)
T ss_dssp             HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC-
T ss_pred             HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC-
Confidence            9999999999999999999887766    7889999888752       799999999889999999999999999986 


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~  271 (415)
                        +++|+++|+++|+++|+||+|+.+.+..    ++ .++   ..+++.|+||.++++|+|+ ||+++++        ++
T Consensus       168 --l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~~---~di~~~s~sK~~~~~g~~~~G~~~~~~--------~~  229 (398)
T 2rfv_A          168 --IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QLG---ADIVVHSVTKYINGHGDVIGGIIVGKQ--------EF  229 (398)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GGT---CSEEEEETTTTTTCSSCCCCEEEEECH--------HH
T ss_pred             --HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hhC---CcEEEEeCcccccCCCCceEEEEEECH--------HH
Confidence              8888999999999999999999766431    22 222   3588999999999999998 9999865        45


Q ss_pred             HH-HHHhhcc-c-cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC--------------CCcCCCC
Q 014936          272 VE-RMKKYFD-I-LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP--------------CISCPHK  334 (415)
Q Consensus       272 ~~-~~~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------------~~~~~~~  334 (415)
                      ++ .++.... . +.+.+++.+.++.+.++.     +..+.+++.++.+.+.+.|++.+              ++.+. .
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~  303 (398)
T 2rfv_A          230 IDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELG-Q  303 (398)
T ss_dssp             HHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-H
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH-H
Confidence            55 5554432 2 356788888888888865     33344455556666666666532              22211 1


Q ss_pred             C---CCceEEEEecCccccCCCCCHHHHHHHHHhh---cCeEEEcCCCCC----------------------C-CCeEEE
Q 014936          335 P---EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE---ESVIILPGTAVG----------------------L-KNWLRV  385 (415)
Q Consensus       335 p---~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~---~gi~v~~g~~~~----------------------~-~~~iRi  385 (415)
                      |   ..|.+++++++.        ..+....++.+   .|+.+++|..+.                      . ++.+|+
T Consensus       304 ~~~~~~g~~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRl  375 (398)
T 2rfv_A          304 RQMSLPGGIISFEIAG--------GLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRL  375 (398)
T ss_dssp             HHCSSCCSEEEEEETT--------HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEE
T ss_pred             hhCCCCceEEEEEEcC--------CHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence            1   245666667752        12223334444   378888886531                      1 579999


Q ss_pred             EeeC--ChhhHHHHHHHHHH
Q 014936          386 TFAV--DPYSLEECLDRIKS  403 (415)
Q Consensus       386 ~~~~--~~~~l~~~l~~l~~  403 (415)
                      |++.  ++++++.+++.|++
T Consensus       376 s~~~~~~~~~i~~l~~al~~  395 (398)
T 2rfv_A          376 SVGLEDPEDIINDLEHAIRK  395 (398)
T ss_dssp             ECCSSCHHHHHHHHHHHHHH
T ss_pred             EecCCCHHHHHHHHHHHHHh
Confidence            9964  45566555555543

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=100.00  E-value=2.2e-31  Score=255.64  Aligned_cols=347  Identities=14%  Similarity=0.087  Sum_probs=231.3

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~  111 (415)
                      +++.++||+.+.+....+. .+|.+.+++.+.+...  ..|+...+..++++++++++.+..+.  .. +++++++|+++
T Consensus        41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggse  115 (439)
T 3dxv_A           41 NGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGSD  115 (439)
T ss_dssp             TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHHH
T ss_pred             CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHHH
Confidence            4778999999986432222 6899999999988754  24544456667888888888776542  33 79999999999


Q ss_pred             HHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHhCCCe-E--------------EEeeccCCCCCCC-----ChhHHHhh
Q 014936          112 AIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIE-V--------------RHFDLLPDKGWEV-----DLDDIESL  169 (415)
Q Consensus       112 al~~~~~~l--~~~gd~vi~~~p~y~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----~~~~l~~~  169 (415)
                      ++..+++++  ..+++.|++.+++|++....+...+.. .              ..++.+  +.+..     |+++|+++
T Consensus       116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~  193 (439)
T 3dxv_A          116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEK  193 (439)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHH
Confidence            999999985  235678999999998766655444322 1              122221  11111     68999998


Q ss_pred             c----CCCceEEEecCCCCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCc
Q 014936          170 A----DQNTVALVIINPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS  244 (415)
Q Consensus       170 ~----~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  244 (415)
                      +    .++++++++..++|++|.+. +.+.+++|.++|++||+++|+||+|.++...+.. .....++...+++   |||
T Consensus       194 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~s  269 (439)
T 3dxv_A          194 LAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VLG  269 (439)
T ss_dssp             HHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EEC
T ss_pred             HHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EEc
Confidence            8    44566666666677888765 5555999999999999999999999976555432 1222223222333   899


Q ss_pred             cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHh
Q 014936          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI  323 (415)
Q Consensus       245 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  323 (415)
                      |+++ +|+|+||+++++        ++++.+.... ..++ .+++++.++.++|+...+   ++..++++++++.+.+.|
T Consensus       270 K~~~-~G~riG~~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l  336 (439)
T 3dxv_A          270 KGLG-GGLPLSAVIAPA--------EILDCASAFAMQTLH-GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGL  336 (439)
T ss_dssp             GGGG-TTSCCEEEEEEH--------HHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred             chhc-CCcceEEEEECH--------HHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHH
Confidence            9987 599999999975        5666665442 2345 788888888888764211   234445555555555555


Q ss_pred             h----cCCCCcCCCCCCCceEEEEecCcccc---CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhH
Q 014936          324 K----EIPCISCPHKPEGSMAVMLKLNLSLL---DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSL  394 (415)
Q Consensus       324 ~----~~~~~~~~~~p~~g~~~~~~l~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l  394 (415)
                      +    .++.+. . .+..|.|+++.+.....   +......++...++ ++||.+.|+..+  .+++||++  ..+++++
T Consensus       337 ~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i  411 (439)
T 3dxv_A          337 SELAKRHPLIG-D-IRGRGLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGMN--GNVLEFTPPLTITETDI  411 (439)
T ss_dssp             HHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEESTT--SCEEEECCCTTCCHHHH
T ss_pred             HHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEECCCCCCHHHH
Confidence            4    344444 2 34567788877632100   00012445666665 559999998543  48999987  4689999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          395 EECLDRIKSFYQRH  408 (415)
Q Consensus       395 ~~~l~~l~~~~~~~  408 (415)
                      ++++++|+++++++
T Consensus       412 ~~~l~~l~~~l~~~  425 (439)
T 3dxv_A          412 HKALDLLDRAFSEL  425 (439)
T ss_dssp             HHHHHHHHHHHHTG
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998765

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.98  E-value=6.8e-30  Score=244.06  Aligned_cols=332  Identities=14%  Similarity=0.122  Sum_probs=238.7

Q ss_pred             cCccee--EecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           33 NEKKVI--SLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        33 ~~~~~i--~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      ++.+++  +|+.|.|+    +++++.+++++.+.+..+   .|++ ..+..++|+.++++++        .+++++|+|+
T Consensus        12 gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~gg   76 (424)
T 2po3_A           12 GGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCNA   76 (424)
T ss_dssp             TCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCH
T ss_pred             cCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCH
Confidence            345554  68888865    666789999999888653   4776 6788999999999993        3699999999


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccC
Q 014936          110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV  189 (415)
Q Consensus       110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~  189 (415)
                      ++++.+++.++. +||+|+++.|+|+.+...+...|++++.+++++ +++.+|+++|++.+++++++|++++   |||..
T Consensus        77 t~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~  151 (424)
T 2po3_A           77 TAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWGRP  151 (424)
T ss_dssp             HHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGGCC
T ss_pred             HHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCCCc
Confidence            999999999985 789999999999999999999999999999864 3567899999999988888888754   89987


Q ss_pred             CCHHHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          190 YSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       190 ~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                         .++++|+++|+++|+++|+|++|+. +.+++.   ++..+.   + +++.||||.++++|+|+||+++++       
T Consensus       152 ---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~-------  214 (424)
T 2po3_A          152 ---CAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLG---D-AEVFSFHATKAVNAFEGGAVVTDD-------  214 (424)
T ss_dssp             ---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS---S-EEEEECCTTSSSCCSSCEEEEESC-------
T ss_pred             ---CCHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccc---C-EEEEeCCCCCCccCCCCeEEEeCC-------
Confidence               6788999999999999999999994 555442   222222   2 888999966667779999999863       


Q ss_pred             HHHHHHHHhhccccC-------------CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          269 PKVVERMKKYFDILG-------------DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       269 ~~~~~~~~~~~~~~~-------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +++++.+........             ..++....++...     .+.+++..++.+++++++.+.|++++++.+...|
T Consensus       215 ~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~  289 (424)
T 2po3_A          215 ADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS-----LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHD  289 (424)
T ss_dssp             HHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGG
T ss_pred             HHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCC
Confidence            257776665432110             1122222222211     2456777888888889999999988787733223


Q ss_pred             CCc----eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------------CCC-------eEEEEe--e
Q 014936          336 EGS----MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------------LKN-------WLRVTF--A  388 (415)
Q Consensus       336 ~~g----~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------------~~~-------~iRi~~--~  388 (415)
                      .++    .++++.++.... + .+..++... |.++||.+.+.....              .++       .||+++  .
T Consensus       290 ~~~~~~~~~~~i~~~~~~~-~-~~~~~l~~~-L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~  366 (424)
T 2po3_A          290 RHGLNNHQYVIVEIDEATT-G-IHRDLVMEV-LKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTA  366 (424)
T ss_dssp             GGSCCCCCCEEEEECHHHH-S-SCHHHHHHH-HHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTT
T ss_pred             CCCccccEEEEEEECCccc-h-hhHHHHHHH-HHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCC
Confidence            333    234455542000 1 145556554 467899998721100              011       277774  4


Q ss_pred             CChhhHHHHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      .++++++.+++.|++++++..
T Consensus       367 ~t~e~i~~~~~~L~~~~~~~~  387 (424)
T 2po3_A          367 IGDDDIRRVADLLRLCATRGR  387 (424)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhhhH
Confidence            689999999999999887643

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.98  E-value=6.6e-31  Score=249.04  Aligned_cols=324  Identities=16%  Similarity=0.152  Sum_probs=240.7

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      .+++||+.|.|.    +  ++.+++++.+.+...   .|.+..+..++|+.++++++        .+++++++||++++.
T Consensus        30 ~~~id~~~~~~~----~--~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~--------~~~~v~~~~Gt~a~~   92 (399)
T 2oga_A           30 VPFLDLKAAYEE----L--RAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE--------TDHAVGVNSGMDALQ   92 (399)
T ss_dssp             BCSCCHHHHHHH----T--HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT--------SSEEEEESCHHHHHH
T ss_pred             CcccccCcCCCC----C--CHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC--------CCeEEEecCHHHHHH
Confidence            578999999753    2  388999999887642   46555678999999999983        236788888899999


Q ss_pred             HHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          115 VAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       115 ~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      .++.++ .++||+|+++.|+|+.+...++..|.+++.++.++ +++.+|++++++.+++++++|+   |+||||.+.+  
T Consensus        93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~--  166 (399)
T 2oga_A           93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD--  166 (399)
T ss_dssp             HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred             HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence            999999 89999999999999999999999999999998764 3467999999999988777665   5789999855  


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccC--ccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                       +++|.++|+++|+++|+|++|+.+. +++.   .+..+.    .+++.|+  ||.++.+| |+||+++++       ++
T Consensus       167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~-------~~  230 (399)
T 2oga_A          167 -MDALRELADRHGLHIVEDAAQAHGARYRGR---RIGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGD-------PE  230 (399)
T ss_dssp             -HHHHHHHHHHHTCEECEECTTCTTCEETTE---ETTCTT----CEEEEECCTTSSSCCSS-CCEEEEESC-------HH
T ss_pred             -HHHHHHHHHHcCCEEEEECcccccCccCCe---eccccc----CEEEEeCCCCccCCcCC-ceEEEEeCC-------HH
Confidence             7888889999999999999998753 3222   121121    2778888  79988878 999999864       25


Q ss_pred             HHHHHHhhccc-------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          271 VVERMKKYFDI-------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       271 ~~~~~~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +++.++.....             ++..+++.+.++...++.     ++...++.+++++++.+.|++++++.....|..
T Consensus       231 ~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~  305 (399)
T 2oga_A          231 LAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPD  305 (399)
T ss_dssp             HHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTT
T ss_pred             HHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence            76666554221             124466666666666653     455666777788889999998888774334556


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC-----------CC------------CCeEEEEee--CChh
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV-----------GL------------KNWLRVTFA--VDPY  392 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-----------~~------------~~~iRi~~~--~~~~  392 (415)
                      +.++|+.++...    .+..++...+ .++||.+.++...           +.            .+++||++.  .+++
T Consensus       306 ~~~~~~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~e  380 (399)
T 2oga_A          306 TDPVWHLFTVRT----ERRDELRSHL-DARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERP  380 (399)
T ss_dssp             EECCCSSEEEEC----SSHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHH
T ss_pred             CcceeEEEEEEC----CCHHHHHHHH-HHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHH
Confidence            666653332210    1455666665 5679999875321           00            157999994  6899


Q ss_pred             hHHHHHHHHHHHHHH
Q 014936          393 SLEECLDRIKSFYQR  407 (415)
Q Consensus       393 ~l~~~l~~l~~~~~~  407 (415)
                      +++.+++.|++++++
T Consensus       381 di~~~~~~l~~~~~~  395 (399)
T 2oga_A          381 QALRVIDAVREWAER  395 (399)
T ss_dssp             HHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988764

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.98  E-value=7.5e-31  Score=253.03  Aligned_cols=354  Identities=12%  Similarity=0.045  Sum_probs=235.5

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++||..|.....  ++ .+|.+++++.+++..... .|....+..+.++++++++.+..+  .+.++|++++|+++
T Consensus        48 ~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggse  122 (459)
T 4a6r_A           48 EGNKIIDGMAGLWCVN--VGYGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSE  122 (459)
T ss_dssp             TCCEEEETTHHHHTCT--TCBCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHH
T ss_pred             CCCEEEECCCchhccc--CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHH
Confidence            4678999988843211  22 479999999998875331 233333445666777777766544  46779999999999


Q ss_pred             HHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccC--C-CCCCCC-----
Q 014936          112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP--D-KGWEVD-----  162 (415)
Q Consensus       112 al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~~-----  162 (415)
                      ++..+++++.+        +++.|++.+|+|+++...+...+.             .+..++...  . +++ .|     
T Consensus       123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~  201 (459)
T 4a6r_A          123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG  201 (459)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence            99999999875        578999999999987766554322             222333211  0 111 34     


Q ss_pred             ---hhHHHhhcCC---CceEEEecCCC-Ccccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936          163 ---LDDIESLADQ---NTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (415)
Q Consensus       163 ---~~~l~~~~~~---~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  234 (415)
                         +++|++.++.   ...++++++|. |++|. .++.+.+++|.++|++||+++|+||+|.++...|... ....++..
T Consensus       202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~  280 (459)
T 4a6r_A          202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQ  280 (459)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCC
Confidence               7788887752   45566777775 45555 5699999999999999999999999999876665422 12222322


Q ss_pred             CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH---hh-ccccCCchhHHHHHHHHhhCCCc-HHHHHHHH
Q 014936          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK---KY-FDILGDPATFIQAAVPSILQQPD-EVFFKKTL  309 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~  309 (415)
                      .+++   +|||+++.+|+|+||+++++        ++++.+.   .. ...+++.+++++.++.++|+... ++.+++.+
T Consensus       281 pdi~---t~sK~l~gg~~~lg~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~  349 (459)
T 4a6r_A          281 PDLF---TAAKGLSSGYLPIGAVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVK  349 (459)
T ss_dssp             CSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred             CCee---ehhhhhcCCCCCccceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHH
Confidence            2333   68899766669999999965        6888776   22 22356788999999998886422 12333444


Q ss_pred             -HHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC--C----CCCHHHHHHHHHhhcCeEEEcCCCCCCCCe
Q 014936          310 -NLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD--D----IIDDIDFCFKLAKEESVIILPGTAVGLKNW  382 (415)
Q Consensus       310 -~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~--~----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~  382 (415)
                       +.....++.+.+.|.++|.+. . .+..|.|+++.+......  .    .....++...+ .++||.+.|+.     ++
T Consensus       350 ~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~  421 (459)
T 4a6r_A          350 DDIGPYMQKRWRETFSRFEHVD-D-VRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF-FRNNLIMRACG-----DH  421 (459)
T ss_dssp             HTHHHHHHHHHHHHHTTCTTEE-E-EEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH-HHTTEECEEET-----TE
T ss_pred             HHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCccccccccchHHHHHHHHHHH-HHCCeEEecCC-----CE
Confidence             344444444545555555454 2 344567777776532100  0    00034555555 45699999863     79


Q ss_pred             EEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          383 LRVTF--AVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       383 iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      +||++  ..+++++++++++|++++++...++
T Consensus       422 iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~  453 (459)
T 4a6r_A          422 IVSAPPLVMTRAEVDEMLAVAERCLEEFEQTL  453 (459)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            99996  5789999999999999998876654

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.98  E-value=1.4e-31  Score=252.56  Aligned_cols=329  Identities=15%  Similarity=0.145  Sum_probs=234.8

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      +.+.|..|.      .++++.+++++.+....   ..++. .....++++.++++++...  +++++++++|+|+++++.
T Consensus         5 ~~~~~~p~p------~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~~~g~t~al~   73 (385)
T 2bkw_A            5 VDTLLIPGP------IILSGAVQKALDVPSLG---HTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVLAGSGTLGWD   73 (385)
T ss_dssp             CCEECSSSS------CCCCHHHHHTTSCCCCC---TTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEEESCTTHHHH
T ss_pred             cceeecCCC------cCchHHHHHHHhccccc---cCCHHHHHHHHHHHHHHHHHhCCCC--CCCCceEEEcCchHHHHH
Confidence            346666663      45678888777654331   11211 1135678888888886432  245789999999999999


Q ss_pred             HHHHHhc---CCCCEEEEc-CCCCcchH-HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCcccc
Q 014936          115 VAMALLS---RPGANILLP-RPGFPIYE-LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGN  188 (415)
Q Consensus       115 ~~~~~l~---~~gd~vi~~-~p~y~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~  188 (415)
                      +++.++.   ++||+|+++ .++|+... ..++..|++++.++.. +.++.+|+++|++++++ ++++|++++|+||||.
T Consensus        74 ~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~  152 (385)
T 2bkw_A           74 IFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTSTAV  152 (385)
T ss_dssp             HHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTTTE
T ss_pred             HHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCe
Confidence            9999998   899999887 55666553 6778889999999872 23456899999999876 7899999999999999


Q ss_pred             CCCHHHHHHHHHHHhhc--CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEEEeeCCCCC
Q 014936          189 VYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGM  265 (415)
Q Consensus       189 ~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~  265 (415)
                      +++   +++|+++|+++  |+++|+|++|+...    ....+..++   ..+++.|+||+++ .+|  +||+++++    
T Consensus       153 ~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~G--~G~~~~~~----  216 (385)
T 2bkw_A          153 LSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFDEWG---VDFALTASQKAIGAPAG--LSISLCSS----  216 (385)
T ss_dssp             ECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTTTTT---CSEEEEESSSTTCCCSC--EEEEEECH----
T ss_pred             EcC---HHHHHHHHHhhCCCCEEEEECccccCC----ccccccccC---ceEEEecCccccccCCc--ceEEEEcH----
Confidence            987   66888899999  99999999998532    111222222   3478899999654 467  59999865    


Q ss_pred             CChHHHHH-HHH----------------------hhcc----ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936          266 FRKPKVVE-RMK----------------------KYFD----ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       266 ~~~~~~~~-~~~----------------------~~~~----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  318 (415)
                          ++++ .++                      ....    ..++.+...+.++..+++...+..+++..+++++++++
T Consensus       217 ----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~  292 (385)
T 2bkw_A          217 ----RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDW  292 (385)
T ss_dssp             ----HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence                3443 221                      1110    01356667777776666532222367788999999999


Q ss_pred             HHHHh-hcCCCCcCCCCC-----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEE-ee--
Q 014936          319 CYNKI-KEIPCISCPHKP-----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVT-FA--  388 (415)
Q Consensus       319 l~~~l-~~~~~~~~~~~p-----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~-~~--  388 (415)
                      +.+.| +++ ++.++ .|     ..++++|+.++        +..++...+ .++||.+.+|..+.. .+++||+ ++  
T Consensus       293 l~~~L~~~~-g~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~iRis~~~~~  361 (385)
T 2bkw_A          293 FKDSLVNGL-QLTSV-SRYPSNMSAHGLTAVYVA--------DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMGVT  361 (385)
T ss_dssp             HHHHHHTTT-CCEES-SCSSSTTBCSSCEEEECS--------CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCGGG
T ss_pred             HHHHHHHhc-Cceec-ccCcccccCCceEEEecC--------CHHHHHHHH-HHCCeEEeCCCCcccCCCEEEEEccccc
Confidence            99999 888 77733 32     24778888875        245666666 567999999876532 5799999 65  


Q ss_pred             ---CChhhHHHHHHHHHHHHHH
Q 014936          389 ---VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       389 ---~~~~~l~~~l~~l~~~~~~  407 (415)
                         .+++++++++++|++++++
T Consensus       362 ~~~~~~e~i~~~~~~l~~~~~~  383 (385)
T 2bkw_A          362 ACNKNLPYMKNCFDLIKLALQR  383 (385)
T ss_dssp             TSSTTCTHHHHHHHHHHHHTTC
T ss_pred             cccCCHHHHHHHHHHHHHHHHh
Confidence               4889999999999987653

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.98  E-value=1.5e-30  Score=250.93  Aligned_cols=356  Identities=13%  Similarity=0.010  Sum_probs=236.6

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++||..|.....  ++ .+|.+++++.+++..... .|....+..++++++++++.+..  +.+.++|++++|++
T Consensus        48 ~~G~~~lD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~~~gGs  122 (460)
T 3gju_A           48 NNGRKSIDAFAGLYCVN--VGYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRA--PKGMSRVYFGLSGS  122 (460)
T ss_dssp             TTCCEEEETTHHHHTCT--TCBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHS--CTTEEEEEEESSHH
T ss_pred             CCCCEEEECCcchhhcc--CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCchH
Confidence            35778999998842211  22 469999999998775321 23333344566666666666543  34678999999999


Q ss_pred             HHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccC---CCCCCCC----
Q 014936          111 QAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP---DKGWEVD----  162 (415)
Q Consensus       111 ~al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~~----  162 (415)
                      ++++.+++++..        +++.|++.+++|+++...+...+.             .+..++...   .++++.+    
T Consensus       123 eA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~  202 (460)
T 3gju_A          123 DANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQF  202 (460)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHH
Confidence            999999999873        468999999999987765544321             233344211   0111233    


Q ss_pred             ----hhHHHhhcCC---CceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          163 ----LDDIESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       163 ----~~~l~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                          +++|+++++.   ...++++++| +|++|. +++.+.+++|.++|++||+++|+||+|.++...|... ....++.
T Consensus       203 ~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~  281 (460)
T 3gju_A          203 SQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGI  281 (460)
T ss_dssp             HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTC
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCC
Confidence                5788887752   3344555555 667776 6788899999999999999999999999876555322 1222232


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCc-HHH
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPD-EVF  304 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~-~~~  304 (415)
                      ..++   .+|||+++.+++|+||+++++        ++++.+...        ...+++.+++++.++.++|+... ++.
T Consensus       282 ~pdi---~t~sK~l~gG~~~lg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~  350 (460)
T 3gju_A          282 KPDL---ITIAKGLTSAYAPLSGVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDL  350 (460)
T ss_dssp             CCSE---EEECGGGTTTSSCCEEEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTH
T ss_pred             CCCe---eeeehhhcCCCCCeEEEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence            2223   368999654338999999976        688877521        22356788999999998887422 234


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC--C----CCCHHHHHHHHHhhcCeEEEcCCCCC
Q 014936          305 FKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD--D----IIDDIDFCFKLAKEESVIILPGTAVG  378 (415)
Q Consensus       305 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~--~----~~~~~~~~~~ll~~~gi~v~~g~~~~  378 (415)
                      +++..+..+..++.+.+.++++|.+. . .+..|.++++.+......  .    .....++...+ .++||.+.|+.   
T Consensus       351 ~~~~~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~---  424 (460)
T 3gju_A          351 VTNAGETGAYFRAELAKAVGGHKNVG-E-VRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATAL-AASGVIGRAMP---  424 (460)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECEECS---
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeE-E-EeeeeEEEEEEEccCccccccccchHHHHHHHHHHH-HHCCeEEecCC---
Confidence            55555666666666666666666554 2 344567777776532110  0    00133455555 56699999875   


Q ss_pred             CCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHH
Q 014936          379 LKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       379 ~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      ..+++||++  ..+++++++++++|++++++..+
T Consensus       425 ~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~  458 (460)
T 3gju_A          425 QGDILGFAPPLCLTREQADIVVSKTADAVKSVFA  458 (460)
T ss_dssp             SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            358999996  57899999999999999987654

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.98  E-value=5.8e-31  Score=251.71  Aligned_cols=334  Identities=16%  Similarity=0.173  Sum_probs=223.2

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~--~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .+++.++||..|.+.  ..++ .+|.+.+++.+++.....  ..|+ .....++++.+++++        ..+++++++|
T Consensus        62 ~~G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~s  130 (433)
T 1z7d_A           62 VNDKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAFF-SVPLGICERYLTNLL--------GYDKVLMMNT  130 (433)
T ss_dssp             TTCCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTSE-EHHHHHHHHHHHHHH--------TCSEEEEESS
T ss_pred             CCCCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCcC-CHHHHHHHHHHHhhc--------CCCeEEEeCC
Confidence            346778999887532  1255 789999999999875322  1232 223456666666665        3589999999


Q ss_pred             hHHHHHHHHHHhc---------CCC-CEEEEcCCCCcchHHHH-HhCC------------CeEEEeeccCCCCCCCChhH
Q 014936          109 CTQAIDVAMALLS---------RPG-ANILLPRPGFPIYELSA-AFRH------------IEVRHFDLLPDKGWEVDLDD  165 (415)
Q Consensus       109 ~~~al~~~~~~l~---------~~g-d~vi~~~p~y~~~~~~~-~~~g------------~~~~~~~~~~~~~~~~~~~~  165 (415)
                      +++|+..+++++.         .+| ++|++.+|+|++....+ ...|            .++..++.       .|+++
T Consensus       131 GseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~  203 (433)
T 1z7d_A          131 GAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEA  203 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHH
T ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHH
Confidence            9999999998864         467 99999999998765432 2223            23333432       38999


Q ss_pred             HHhhc-CCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936          166 IESLA-DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (415)
Q Consensus       166 l~~~~-~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  242 (415)
                      |++++ .+++++ ++++| +|++|.+ ++.+++++|.++|+++|+++|+||+|.++.+.+... .+..++...+++   |
T Consensus       204 le~~l~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~~~~~~~~di~---t  278 (433)
T 1z7d_A          204 LEEELKDPNVCA-FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---L  278 (433)
T ss_dssp             HHHHHTSTTEEE-EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---E
T ss_pred             HHHHhCCCCEEE-EEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-hhHhcCCCCCEE---E
Confidence            99998 455555 55556 5678975 788999999999999999999999998765544321 122222222232   8


Q ss_pred             CccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936          243 LSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY  320 (415)
Q Consensus       243 ~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  320 (415)
                      +||.++ +| +|+||+++++        ++++.+... ...+++.+++++.++.++|+...+   ++..++++++++++.
T Consensus       279 ~sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~  346 (433)
T 1z7d_A          279 LGKALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFL  346 (433)
T ss_dssp             ECGGGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred             ECcccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHH
Confidence            899987 78 9999999965        566655443 223456788888888888764211   245667777777777


Q ss_pred             HHhhcC-CCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHH
Q 014936          321 NKIKEI-PCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEE  396 (415)
Q Consensus       321 ~~l~~~-~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~  396 (415)
                      +.|+++ .++..+ ..+..|.++|+.++...    .+..++...++ ++||.+.|+.    .+++|++++  .+++++++
T Consensus       347 ~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~----~~~~~~~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~  417 (433)
T 1z7d_A          347 ENLKRELKDSKIVRDVRGKGLLCAIEFKNEL----VNVLDICLKLK-ENGLITRDVH----DKTIRLTPPLCITKEQLDE  417 (433)
T ss_dssp             HHHHHHHTTCTTEEEEEEETTEEEEEECTTT----CCHHHHHHHHH-HTTEECCEET----TTEEEECCCTTCCHHHHHH
T ss_pred             HHHHHHHHhCCCeEEEEeeeeEEEEEEccCh----hHHHHHHHHHH-HCCeEEecCC----CCEEEEECCcCCCHHHHHH
Confidence            777653 122211 12446778888886421    13566777765 5699998862    579999884  68999999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRHA  409 (415)
Q Consensus       397 ~l~~l~~~~~~~~  409 (415)
                      ++++|++++++..
T Consensus       418 ~l~~l~~~l~~~~  430 (433)
T 1z7d_A          418 CTEIIVKTVKFFD  430 (433)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987653

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.98  E-value=6.9e-31  Score=251.69  Aligned_cols=333  Identities=14%  Similarity=0.102  Sum_probs=222.2

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---------CcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---------GLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~---------g~~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      .+.+.|+.+.+.     ++++.+++++.+.+..  ...|+...         ...++|+.+++++      ++++++|++
T Consensus        17 ~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~   83 (432)
T 3a9z_A           17 NRKVYMDYNATT-----PLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDIIF   83 (432)
T ss_dssp             -CCEECBTTTCC-----CCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred             CCcEEeeCCccC-----CCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEEE
Confidence            456888887642     5678999999998764  22344321         1358999999998      457789999


Q ss_pred             eCChHHHHHHHHHHhc--------CCCCEEEEcCCCCcch-----------------HHHHHhCCCeEEEeeccCCCCCC
Q 014936          106 TSGCTQAIDVAMALLS--------RPGANILLPRPGFPIY-----------------ELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~--------~~gd~vi~~~p~y~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      |+|+++++.+++.++.        ++||+|+++.|+|+.+                 ...++..|.+++.++.+++ ++.
T Consensus        84 ~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~  162 (432)
T 3a9z_A           84 TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQ  162 (432)
T ss_dssp             ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSS
T ss_pred             eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCC
Confidence            9999999999999986        5899999999999865                 3344557999999987542 346


Q ss_pred             CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC----------cEEEEccccCCcccCCCCcccccc
Q 014936          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK----------TLVIADEVYGHLVFGDKPFVPMGV  230 (415)
Q Consensus       161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~----------~~li~De~~~~~~~~~~~~~~~~~  230 (415)
                      +|+++|++++++++++|++++|+||||.+++.   ++|.++|+++|          +++|+|++|+.+.    ....+..
T Consensus       163 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~---~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~~  235 (432)
T 3a9z_A          163 VEVEDILAAVRPTTCLVTIMLANNETGVIMPI---SEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVED  235 (432)
T ss_dssp             CCHHHHHHTCCTTEEEEECCSBCTTTCBBCCH---HHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHHH
T ss_pred             cCHHHHHHhccCCceEEEEECcccCcccccCH---HHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChhh
Confidence            89999999998889999999999999999885   56778888988          9999999997632    2222222


Q ss_pred             cCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh--------hccccCCchhHHHHHHHHhhCCCcH
Q 014936          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQAAVPSILQQPDE  302 (415)
Q Consensus       231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~a~~~~l~~~~~  302 (415)
                      ...+   +++.|+||++   |.|+||+++++...       ...+..        .....++.+...+.++.++++.. .
T Consensus       236 ~~~d---~~~~s~~K~~---g~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-~  301 (432)
T 3a9z_A          236 LGVD---FLTIVGHKFY---GPRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV-S  301 (432)
T ss_dssp             HCCS---EEEEEGGGTT---CCSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-H
T ss_pred             cCCC---EEEEehhHhc---CCcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-H
Confidence            3332   5688999986   46699999975320       111111        11123456777777776676532 2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCC-----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936          303 VFFKKTLNLLKQSVDICYNKIKEIPCISCP-HKP-----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA  376 (415)
Q Consensus       303 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p-----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~  376 (415)
                      +++++..++++++++++.+.|++++++.+. ..|     ..+..+++.++...    .+..++...+   .++.+.+|..
T Consensus       302 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l---~~i~~~~G~~  374 (432)
T 3a9z_A          302 ENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----LRGYMVLAQC---QTLLASVGAS  374 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----CCHHHHHHHC---SSEECBSSCG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----CcHHHHHHHh---cCeEEecccc
Confidence            467888899999999999999875454311 122     12334544454210    1344444432   3777777654


Q ss_pred             C---------------CC-----CCeEEEEeeC--ChhhHHHHHHHHHHHHHHHH
Q 014936          377 V---------------GL-----KNWLRVTFAV--DPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       377 ~---------------~~-----~~~iRi~~~~--~~~~l~~~l~~l~~~~~~~~  409 (415)
                      |               +.     .+++||+++.  ++++++.++++|++++++++
T Consensus       375 ~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~  429 (432)
T 3a9z_A          375 CHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE  429 (432)
T ss_dssp             GGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            4               22     3789999964  89999999999999987653

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.98  E-value=1.2e-30  Score=251.35  Aligned_cols=350  Identities=14%  Similarity=0.078  Sum_probs=225.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +++.++||..|.+....+ ..+|.+++++.+++.....   ....+..+.++++++++.+..+  ...+ |++|+|++++
T Consensus        47 ~g~~~lD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA  119 (452)
T 3n5m_A           47 QGKRYLDGMSGLWCVNSG-YGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEA  119 (452)
T ss_dssp             TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHH
T ss_pred             CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHH
Confidence            477899999884221211 2479999999999875322   1122334555555555554433  3344 9999999999


Q ss_pred             HHHHHHHhc-----C---CCCEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCCCCCCC-C--------
Q 014936          113 IDVAMALLS-----R---PGANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEV-D--------  162 (415)
Q Consensus       113 l~~~~~~l~-----~---~gd~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-~--------  162 (415)
                      ++.+++.+.     .   +++.|++.+|+|+++...+...+..             +..++......... |        
T Consensus       120 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (452)
T 3n5m_A          120 NETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVE  199 (452)
T ss_dssp             HHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHH
Confidence            999999987     5   7899999999999877665544322             22222211000001 1        


Q ss_pred             -hhHHHhhcC----CCceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          163 -LDDIESLAD----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       163 -~~~l~~~~~----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                       +++|++.++    ++++++++..+ +| +|.++ +.+.+++|.++|++||+++|+||+|.++.+.|... .....+...
T Consensus       200 ~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~~  277 (452)
T 3n5m_A          200 CVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVKP  277 (452)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCCC
Confidence             788988886    34555555555 79 99765 88889999999999999999999999876655422 222222222


Q ss_pred             CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh----h---ccccCCchhHHHHHHHHhhCCCcH-HHHH
Q 014936          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK----Y---FDILGDPATFIQAAVPSILQQPDE-VFFK  306 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~a~~~~l~~~~~-~~~~  306 (415)
                      +   +.+|||.+++ | +|+||+++++        ++++.+..    .   ...+++.+++++.++.++|+...+ +..+
T Consensus       278 d---i~t~sK~l~~-G~~~ig~~~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~  345 (452)
T 3n5m_A          278 D---IITMAKGITS-AYLPLSATAVKR--------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIE  345 (452)
T ss_dssp             S---EEEECGGGGT-TSSCCEEEEEEH--------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred             C---EEeecccccC-CCcceEEEEECH--------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence            2   3368999866 9 9999999975        67777643    1   123567889999999888864211 2233


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCC--C--CCHHHHHHHHHhhcCeEEEcCCCCCC--C
Q 014936          307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDD--I--IDDIDFCFKLAKEESVIILPGTAVGL--K  380 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~--~--~~~~~~~~~ll~~~gi~v~~g~~~~~--~  380 (415)
                      +..+..+..++.+.+.+.++|.+. . .+..|.++++.+.......  .  ....++...+ .++||.+.|+..|..  .
T Consensus       346 ~~~~~~~~l~~~L~~~~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~~~~~  422 (452)
T 3n5m_A          346 RSAQMGSLLLEQLKEEIGEHPLVG-D-IRGKGLLVGIELVNDKETKEPIDNDKIASVVNAC-KEKGLIIGRNGMTTAGYN  422 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEE-E-EEESSSCEEEEEEEETTTTEECCHHHHHHHHHHH-HHTTEECEECTTSSTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHH-HHCCcEEeecCcccCCCC
Confidence            333333334444444444555444 2 3455667777663211000  0  0013455555 567999999886533  5


Q ss_pred             CeEEEEe--eCChhhHHHHHHHHHHHHH
Q 014936          381 NWLRVTF--AVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       381 ~~iRi~~--~~~~~~l~~~l~~l~~~~~  406 (415)
                      +++||++  ..+++++++++++|+++++
T Consensus       423 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~  450 (452)
T 3n5m_A          423 NILTLAPPLVISSEEIAFVIGTLKTAME  450 (452)
T ss_dssp             CEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            8999986  4789999999999998875

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.98  E-value=1.5e-31  Score=249.96  Aligned_cols=323  Identities=15%  Similarity=0.111  Sum_probs=224.5

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCC---CCC----cHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSE---KFNGYAP---TAG----LPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~y~~---~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      .++++..|.      .++++.+++++.+.+...   ....|..   ..+    ..++++.+++++    |.. ++++|++
T Consensus         3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~v~~   71 (360)
T 1w23_A            3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL----QIP-NDYQILF   71 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH----TCC-TTEEEEE
T ss_pred             ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEE
Confidence            357777774      366799999999887531   0111111   122    345556666655    432 3579999


Q ss_pred             eCCh-HHHHHHHHHHhcCC---CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHh-hcCCCceEEEec
Q 014936          106 TSGC-TQAIDVAMALLSRP---GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVII  180 (415)
Q Consensus       106 ~~g~-~~al~~~~~~l~~~---gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~  180 (415)
                      ++|+ ++++.+++.++..+   ||.|+++.++|.. ...++..| +++.++.+++++ .+|++++++ ++++++++++++
T Consensus        72 ~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~  148 (360)
T 1w23_A           72 LQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHIT  148 (360)
T ss_dssp             ESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEE
T ss_pred             ECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEe
Confidence            9999 99999999998865   5677777777765 34467789 999998864333 378999998 888889999999


Q ss_pred             CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      +|+||||.+++  ++      ++++|+++|+|++|+.+..    ...+..+     .++++|+||.|+++|  +||++++
T Consensus       149 ~~~nptG~~~~--~i------~~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~  209 (360)
T 1w23_A          149 SNNTIYGTQYQ--NF------PEINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVK  209 (360)
T ss_dssp             SEETTTTEECS--SC------CCCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEE
T ss_pred             CCCCCcceecc--cc------cccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEc
Confidence            99999999987  22      2379999999999987542    1223222     178899999988777  8999987


Q ss_pred             CCCCCCChHHHHHHHHhhc-------------cccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcC
Q 014936          261 DPCGMFRKPKVVERMKKYF-------------DILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      +        ++++.+....             ....+++...+.++..+++...+. ++++..++++++++++.+.|+++
T Consensus       210 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  281 (360)
T 1w23_A          210 K--------DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES  281 (360)
T ss_dssp             H--------HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             H--------HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence            5        3443332211             112345666666666666532222 57888999999999999999988


Q ss_pred             CCC-cCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHH
Q 014936          327 PCI-SCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRI  401 (415)
Q Consensus       327 ~~~-~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l  401 (415)
                      +++ .....|  .++.++|+.++..     .+..++...+ .++||.+.||..+  ++++|++++  .+++++++++++|
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l  353 (360)
T 1w23_A          282 NGFYVGHAEKGSRSLMNVTFNLRNE-----ELNQQFLAKA-KEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELM  353 (360)
T ss_dssp             TTSSEESSCGGGBCSSEEEEECSSH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHH
T ss_pred             cCcccccCCchhccCcEEEEEcCCC-----ccHHHHHHHH-HHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHH
Confidence            655 411123  2355889888631     1234565554 6679999888754  589999996  5889999999999


Q ss_pred             HHHHHH
Q 014936          402 KSFYQR  407 (415)
Q Consensus       402 ~~~~~~  407 (415)
                      ++++++
T Consensus       354 ~~~~~~  359 (360)
T 1w23_A          354 IQFKEN  359 (360)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            887653

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.97  E-value=6.7e-30  Score=244.68  Aligned_cols=332  Identities=14%  Similarity=0.113  Sum_probs=235.5

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCC--CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~--~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .+++.++||..|.+..  .++ .+|.+.+++.+++......  .|. .....++++.+++++        ..+++++++|
T Consensus        73 ~~g~~ylD~~sg~~~~--~lgh~~p~v~~Ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~s  141 (439)
T 2oat_A           73 VEGRKYFDFLSSYSAV--NQGHCHPKIVNALKSQVDKLTLTSRAFY-NNVLGEYEEYITKLF--------NYHKVLPMNT  141 (439)
T ss_dssp             TTCCEEEESSGGGGTT--TTCBTCHHHHHHHHHHHTTCSCCCTTSE-ESSHHHHHHHHHHHH--------TCSEEEEESS
T ss_pred             CCCCEEEEccCCcccc--cCCCCCHHHHHHHHHHHHhcCcccCccC-CHHHHHHHHHHHHhc--------CCCEEEEeCC
Confidence            3467789998876431  255 7899999999998753221  232 245678888888877        3689999999


Q ss_pred             hHHHHHHHHHHhc---------CCC-CEEEEcCCCCcchHH-HHHhCC------------CeEEEeeccCCCCCCCChhH
Q 014936          109 CTQAIDVAMALLS---------RPG-ANILLPRPGFPIYEL-SAAFRH------------IEVRHFDLLPDKGWEVDLDD  165 (415)
Q Consensus       109 ~~~al~~~~~~l~---------~~g-d~vi~~~p~y~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~~~~~  165 (415)
                      +++|+..+++++.         .+| |.|++.+|+|++... .....|            .++..++.       .|+++
T Consensus       142 GseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~  214 (439)
T 2oat_A          142 GVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPA  214 (439)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHH
T ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHH
Confidence            9999999999875         357 899999999987654 333334            34445543       38999


Q ss_pred             HHhhcC-CCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936          166 IESLAD-QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (415)
Q Consensus       166 l~~~~~-~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  242 (415)
                      |++.++ ++++ +++++| +|++|. .++.+++++|.++|++||+++|+||+|.++.+.+... .+..++...+++   |
T Consensus       215 le~~l~~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t  289 (439)
T 2oat_A          215 LERALQDPNVA-AFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---L  289 (439)
T ss_dssp             HHHHTTSTTEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---E
T ss_pred             HHHHhCCCCEE-EEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---E
Confidence            999984 4555 455566 567896 5799999999999999999999999998765555322 122222222232   8


Q ss_pred             CccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936          243 LSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY  320 (415)
Q Consensus       243 ~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  320 (415)
                      +||.++ +| +|+||+++++        ++++.+... ...+++.+++++.++.++|+...+   ++..++++++++++.
T Consensus       290 ~sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~  357 (439)
T 2oat_A          290 LGKALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILR  357 (439)
T ss_dssp             ECGGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred             eccccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHH
Confidence            999976 58 9999999965        566655443 223456788888888888864211   256788889999999


Q ss_pred             HHhhcCCCCcCC-CCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHH
Q 014936          321 NKIKEIPCISCP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEEC  397 (415)
Q Consensus       321 ~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~  397 (415)
                      +.|+++ ++..+ ..+..|.++|+.++...  + .+..++...++ ++||.+.|+.    .+++|++++  .++++++++
T Consensus       358 ~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~--~-~~~~~l~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~  428 (439)
T 2oat_A          358 NELMKL-PSDVVTAVRGKGLLNAIVIKETK--D-WDAWKVCLRLR-DNGLLAKPTH----GDIIRFAPPLVIKEDELRES  428 (439)
T ss_dssp             HHHTTS-CTTTEEEEEEETTEEEEEECCCS--S-CCHHHHHHHHH-HTTEECCBSS----SSEEEECCCTTCCHHHHHHH
T ss_pred             HHHHHh-cCCCcEEEEeeeeEEEEEEecCc--c-HHHHHHHHHHH-HCCeEEecCC----CCEEEEECccCCCHHHHHHH
Confidence            999887 44321 13446778888886421  0 13566777765 5699998853    579999874  789999999


Q ss_pred             HHHHHHHHHH
Q 014936          398 LDRIKSFYQR  407 (415)
Q Consensus       398 l~~l~~~~~~  407 (415)
                      +++|++++++
T Consensus       429 l~~l~~~l~~  438 (439)
T 2oat_A          429 IEIINKTILS  438 (439)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999988753

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.97  E-value=8.9e-31  Score=251.01  Aligned_cols=344  Identities=14%  Similarity=0.042  Sum_probs=225.1

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++||..+.....  ++ .+|.+++++.+++.......|+. ....+|++.+++++      + .++++++++|+++
T Consensus        53 ~g~~ylD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~sGse  122 (434)
T 3l44_A           53 DGNKYIDYLAAYGPII--TGHAHPHITKAITTAAENGVLYGTPT-ALEVKFAKMLKEAM------P-ALDKVRFVNSGTE  122 (434)
T ss_dssp             TCCEEEECCGGGTTCS--SCBTCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHC------T-TCSEEEEESSHHH
T ss_pred             CCCEEEECCCchhccc--cCCCCHHHHHHHHHHHHhCcCCCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCchHH
Confidence            4778999998864322  33 58999999999887654444554 45567777777775      2 5789999999999


Q ss_pred             HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCC-eEEEeeccCCCCC------------CCChhHHHhhcCC--Cc
Q 014936          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI-EVRHFDLLPDKGW------------EVDLDDIESLADQ--NT  174 (415)
Q Consensus       112 al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~------------~~~~~~l~~~~~~--~~  174 (415)
                      +++.+++.+..  ++++|++.+|+|+++...+...+. ....+......+.            -.|+++|+++++.  ..
T Consensus       123 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  202 (434)
T 3l44_A          123 AVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHE  202 (434)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCC
Confidence            99999988764  678999999999987655443322 1111111000000            0178999988863  34


Q ss_pred             eEEEecCCC-CccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          175 VALVIINPG-NPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       175 ~~v~i~~p~-nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      .++++++|+ |++|.+. +.+.+++|.++|++||+++|+||+|.++ ..+... ....++...+   +.|+||.++ +|+
T Consensus       203 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~  276 (434)
T 3l44_A          203 VAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVTPD---LTALGKVIG-GGL  276 (434)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCCCS---EEEEEGGGG-TTS
T ss_pred             EEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCCCC---eeehhhhhc-CCc
Confidence            456666664 5566654 8899999999999999999999999987 444321 1222222222   347899986 799


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh----
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK----  324 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----  324 (415)
                      |+||+++++        ++++.+...    ...+++.+++++.++.++|+...+   ++..++++++++++.+.|+    
T Consensus       277 ~iG~~~~~~--------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~  345 (434)
T 3l44_A          277 PIGAYGGKK--------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAA  345 (434)
T ss_dssp             SCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeeeEEEcH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHH
Confidence            999998865        677666542    223567888999888888763211   2333444444444444444    


Q ss_pred             cCCCCcCCCCCCCceEEEEecCccccC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936          325 EIPCISCPHKPEGSMAVMLKLNLSLLD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~  396 (415)
                      .++.+. . .+..|.++++.+......        +.....++...+ .++||.+.|+.    .+.+|+++..+++++++
T Consensus       346 ~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~  418 (434)
T 3l44_A          346 KHNIDI-T-LNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLM-LQEGVNLAPSK----YEAWFLTTEHTKEDIEY  418 (434)
T ss_dssp             HTTCCE-E-EEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHH-HHTTEECCSST----TCCEECCTTCCHHHHHH
T ss_pred             hCCCCE-E-EEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHH-HHCCeEEeecC----CCcEEEecccCHHHHHH
Confidence            343222 2 345577777766421110        000124455555 56699999875    35789988889999999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRHAK  410 (415)
Q Consensus       397 ~l~~l~~~~~~~~~  410 (415)
                      ++++|+++++++.+
T Consensus       419 ~l~~l~~~l~~~~~  432 (434)
T 3l44_A          419 TIEAVGRAFAALAD  432 (434)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999987654

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.97  E-value=9.2e-31  Score=253.35  Aligned_cols=330  Identities=15%  Similarity=0.144  Sum_probs=222.4

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCE---E
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGAN---I  127 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~----~gd~---v  127 (415)
                      +.+++++.+.+..+. ..|++..+..++|+++++++        ..+++++|+|+++|+.+++.++.+    +||+   |
T Consensus        55 ~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~--------~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~v  125 (467)
T 1ax4_A           55 NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELF--------NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPV  125 (467)
T ss_dssp             CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHH--------CCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred             HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHc--------CCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceE
Confidence            567777777665443 36777678899999999998        347999999999999999999988    9998   9


Q ss_pred             EEcCCCCcchHHHHHhCCCeEEEeeccC---C-----CCCCCChhHHHhhcCC----CceEEEecCCCCcc-ccCCCHHH
Q 014936          128 LLPRPGFPIYELSAAFRHIEVRHFDLLP---D-----KGWEVDLDDIESLADQ----NTVALVIINPGNPC-GNVYSYQH  194 (415)
Q Consensus       128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~~~~~l~~~~~~----~~~~v~i~~p~npt-G~~~~~~~  194 (415)
                      +++.+.|..+...+...|.++..++...   .     .++.+|+++|++++++    ++++|++++|+||+ |.+++.++
T Consensus       126 iv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~  205 (467)
T 1ax4_A          126 FISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSN  205 (467)
T ss_dssp             EEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHH
T ss_pred             EEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhH
Confidence            9986666676777888898887665421   1     1346899999998864    68899999999999 89999999


Q ss_pred             HHHHHHHHhhcCcEEEEccccCC-c---------ccCCCCccccc-ccCCCCCeEEEccCccccCCC-CceEEEEEeeCC
Q 014936          195 LQKLAETANKLKTLVIADEVYGH-L---------VFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDP  262 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~-~---------~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~  262 (415)
                      +++|+++|++||+++|+|+++.. .         .+.+.....+. ....... +++.|+||.++++ |   |+++.+++
T Consensus       206 l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~~d~  281 (467)
T 1ax4_A          206 LKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLNIG---GLVAIRDN  281 (467)
T ss_dssp             HHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCSSC---EEEEESSC
T ss_pred             HHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eEEEeccccCCCCcc---eEEEeCCH
Confidence            99999999999999999998654 1         12222111111 0001111 4567999998765 4   67766532


Q ss_pred             CCCCChHHHHHHHHhhcc------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC
Q 014936          263 CGMFRKPKVVERMKKYFD------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE  336 (415)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  336 (415)
                      .      ++++.+.....      .....+.....++...++...+   ++..++..++++++.+.|++ +++. +..|.
T Consensus       282 ~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~  350 (467)
T 1ax4_A          282 E------EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE-AGIP-IQYPT  350 (467)
T ss_dssp             H------HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH-TTCC-BCSSC
T ss_pred             H------HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh-CCCC-cccCC
Confidence            0      35555443311      1112232233333323432211   11223334566778888877 3777 44788


Q ss_pred             CceEEEEecCcc--ccC-CCCCHHHHHHHHHhhcCeEEEc-CCCC-------C-----CCCeEEEEee---CChhhHHHH
Q 014936          337 GSMAVMLKLNLS--LLD-DIIDDIDFCFKLAKEESVIILP-GTAV-------G-----LKNWLRVTFA---VDPYSLEEC  397 (415)
Q Consensus       337 ~g~~~~~~l~~~--~~~-~~~~~~~~~~~ll~~~gi~v~~-g~~~-------~-----~~~~iRi~~~---~~~~~l~~~  397 (415)
                      +++++|+++...  ... ...+..++...++.++||.+.| |..+       +     ..+++||++.   +++++++++
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~  430 (467)
T 1ax4_A          351 GGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYI  430 (467)
T ss_dssp             CSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHH
T ss_pred             CceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHH
Confidence            899999883110  000 0013566777775788999998 5432       1     1379999996   689999999


Q ss_pred             HHHHHHHHHHH
Q 014936          398 LDRIKSFYQRH  408 (415)
Q Consensus       398 l~~l~~~~~~~  408 (415)
                      +++|++++++.
T Consensus       431 ~~~l~~~~~~~  441 (467)
T 1ax4_A          431 ADALIGLKEKF  441 (467)
T ss_dssp             HHHHHTTHHHH
T ss_pred             HHHHHHHHHhh
Confidence            99999988763

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.97  E-value=3.8e-31  Score=247.00  Aligned_cols=315  Identities=10%  Similarity=0.022  Sum_probs=213.7

Q ss_pred             HHHHHHHHHHHhc----CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--EEE
Q 014936           55 HVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--NIL  128 (415)
Q Consensus        55 ~~~~~a~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd--~vi  128 (415)
                      |.+.+++++.+..    .....|++..+..+|++.++++++        .+..++++|+++++.+++.++.++||  .|+
T Consensus        21 p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~--------~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi   92 (357)
T 3lws_A           21 KRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVLG--------MDDAVFFPSGTMAQQVALRIWSDETDNRTVA   92 (357)
T ss_dssp             CCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCCHHHHHHHHHHhhcccCcccccCChHHHHHHHHHHHHhC--------CCcEEEecCcHHHHHHHHHHHhhcCCCcEEE
Confidence            3344445444442    123467776788999999999983        23446668888999999999988888  677


Q ss_pred             EcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc-ccCCCHHHHHHHHHHHhh
Q 014936          129 LPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC-GNVYSYQHLQKLAETANK  204 (415)
Q Consensus       129 ~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~  204 (415)
                      ++.++|.....   .....|+++..++.   .++.+|+++++++.  +++++++++|+||| |.+++.+++++|+++|++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~  167 (357)
T 3lws_A           93 YHPLCHLEIHEQDGLKELHPIETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRE  167 (357)
T ss_dssp             ECTTCHHHHSSTTHHHHHSSCEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHH
T ss_pred             ecccceeeeeccchhhhccCcEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHH
Confidence            77776654333   35566888887763   34568999999884  38899999999998 999999999999999999


Q ss_pred             cCcEEEEccccCCcc--cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc-c
Q 014936          205 LKTLVIADEVYGHLV--FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-I  281 (415)
Q Consensus       205 ~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~  281 (415)
                      ||+++|+|++|....  +.+.....+.  ...+  +++.|+||+|+.++.  ||+++++        ++++.+..... .
T Consensus       168 ~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d--~~~~s~sK~~~~~~g--g~~~~~~--------~~~~~~~~~~~~~  233 (357)
T 3lws_A          168 RGIRLHLDGARLFEMLPYYEKTAAEIA--GLFD--SIYISFYKGLGGIAG--AILAGPA--------AFCQTARIWKRRY  233 (357)
T ss_dssp             TTCEEEEEETTHHHHHHHHTCCHHHHH--TTSS--EEEEESSSTTCCSSC--EEEEECH--------HHHHHHHHHHHHT
T ss_pred             cCCEEEEECchhhhhhhhcCCChHHHH--hcCC--EEEEeccccCCCCce--EEEEcCH--------HHHHHHHHHHHHh
Confidence            999999999986211  1122221221  1111  447899999844332  8888754        67777765432 1


Q ss_pred             c--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHH
Q 014936          282 L--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDF  359 (415)
Q Consensus       282 ~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~  359 (415)
                      .  .......+.++...|+.    +. +..+++.++++++.+.|+++|++.+...|.+++|+|++++....   .+..++
T Consensus       234 ~~~~~~~~~~~~~~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  305 (357)
T 3lws_A          234 GGDLISLYPYIVSADYYYEL----RK-DRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---DISPKL  305 (357)
T ss_dssp             TCCCSCCHHHHHHHHHHHHH----HT-TCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---HHHHHH
T ss_pred             cCCcccchHHHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---HHHHHH
Confidence            1  11122233333344432    22 23344677888999999999888842367788999998864110   013344


Q ss_pred             HHHHHhhcCeEEEcCCCCCC-CCeEEEEee-----CChhhHHHHHHHHHHHH
Q 014936          360 CFKLAKEESVIILPGTAVGL-KNWLRVTFA-----VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       360 ~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~-----~~~~~l~~~l~~l~~~~  405 (415)
                       ...|.++||.+.||..+.. ..++|++++     .+.+++++++++|.+++
T Consensus       306 -~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          306 -EQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             -HHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             -HHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence             4455778999999976652 238999985     46789999999988764

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.97  E-value=8.7e-30  Score=248.29  Aligned_cols=330  Identities=15%  Similarity=0.118  Sum_probs=241.2

Q ss_pred             CCcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----C
Q 014936           52 HTTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----P  123 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~-----~  123 (415)
                      ..++.+.+++.+.+...   ....|....+..++++.+++++.+.+|...+++++++++|+++++.+++.++.+     +
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~  154 (497)
T 3mc6_A           75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR  154 (497)
T ss_dssp             CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence            34577888887776542   223455556778999999999998888766688999999999999999999864     4


Q ss_pred             C---CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHH
Q 014936          124 G---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE  200 (415)
Q Consensus       124 g---d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  200 (415)
                      |   |+|+++.++|.++...++..|++++.++.++ +++.+|+++|++++++++++|++++|+||||.+.+   +++|++
T Consensus       155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~  230 (497)
T 3mc6_A          155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK  230 (497)
T ss_dssp             CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred             CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence            6   8999999999999999999999999999864 35679999999999999999999999999999955   678888


Q ss_pred             HHhhcCcEEEEccccCCcccC-----CCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          201 TANKLKTLVIADEVYGHLVFG-----DKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       201 ~~~~~~~~li~De~~~~~~~~-----~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +|+++|+++|+|++|+.+...     +.+.. ++. .......+++.|++|. +.+|.++||+++++        +....
T Consensus       231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~  300 (497)
T 3mc6_A          231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-FRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SDLRM  300 (497)
T ss_dssp             HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS-TTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HHHHT
T ss_pred             HHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc-ccCCCCcEEEECchhh-cCCCCCceeEEecC--------HHHHh
Confidence            899999999999999865421     11111 111 1111224777899997 57788899999876        23322


Q ss_pred             HHhhcccc------------CCch---hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCc
Q 014936          275 MKKYFDIL------------GDPA---TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGS  338 (415)
Q Consensus       275 ~~~~~~~~------------~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g  338 (415)
                      ........            ++.+   ..++.++...+.   ...+++..++..++++++.+.|++ +|++.++..|..+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~  377 (497)
T 3mc6_A          301 HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG---ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS  377 (497)
T ss_dssp             TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS
T ss_pred             hhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee
Confidence            21111100            0111   233445544443   366788889999999999999998 7898854344444


Q ss_pred             eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-CChhhHHHHHHHHHHHHHHHH
Q 014936          339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~  409 (415)
                       ++++..+.      .+..++...+ .++||.+.++..   +..+|++++ .+++++++++++|++++++..
T Consensus       378 -~v~~~~~~------~~~~~l~~~L-~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~  438 (497)
T 3mc6_A          378 -VISFSSKT------LNIHELSDRL-SKKGWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQELK  438 (497)
T ss_dssp             -EEEEECTT------TTHHHHHHHH-HTTTCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHT
T ss_pred             -EEEEeCCC------CCHHHHHHHH-HhCCEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence             44444432      2456666666 556999877653   357899995 678999999999999988754

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.97  E-value=1.1e-30  Score=251.14  Aligned_cols=352  Identities=15%  Similarity=0.058  Sum_probs=228.0

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++||..|.+...  ++ .+|.+++++.+++....  .|....+..+.++++++++.+..+. ...+++++|+|+++
T Consensus        59 ~g~~ylD~~~~~~~~~--lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGse  133 (451)
T 3oks_A           59 DGNRLIDLGSGIAVTT--VGNSAPKVVEAVRSQVGDFT--HTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSE  133 (451)
T ss_dssp             TSCEEEESSHHHHTCT--TCTTCHHHHHHHHHHHTTCS--CCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHH
T ss_pred             CCCEEEEcCCCccccc--cCCCCHHHHHHHHHHHHhcc--cccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHH
Confidence            4677899988743211  33 37999999999987542  3443345556777777777765542 13579999999999


Q ss_pred             HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccC--------CCCCCC---Chh
Q 014936          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLP--------DKGWEV---DLD  164 (415)
Q Consensus       112 al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~--------~~~~~~---~~~  164 (415)
                      |++.+++.+..  .++.|++..++|+++...+...+.              .+..++...        .+....   +++
T Consensus       134 A~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  213 (451)
T 3oks_A          134 AVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAK  213 (451)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHH
Confidence            99999988753  348999999999987766544322              344444320        000001   233


Q ss_pred             HHHhh----cCCCceEEEecCCCCccc--cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936          165 DIESL----ADQNTVALVIINPGNPCG--NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (415)
Q Consensus       165 ~l~~~----~~~~~~~v~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  238 (415)
                      .+++.    +.+.+.++++++|.|++|  ...+.+.+++|.++|++||+++|+||+|.++.+.+.. .....++...+++
T Consensus       214 ~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pdi~  292 (451)
T 3oks_A          214 RAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM-FACEHEGIDPDLI  292 (451)
T ss_dssp             HHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE
T ss_pred             HHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc-hhhhhcCCCCCee
Confidence            33333    334667788888976665  3457778999999999999999999999987665542 2223333222233


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSV  316 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~  316 (415)
                         ||||.++. |+|+||+++++        ++++.+... ...+++.+++++.++.++|+...+ +..++..+..+..+
T Consensus       293 ---t~sK~l~~-G~~iG~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~  360 (451)
T 3oks_A          293 ---VTAKGIAG-GLPLSAVTGRA--------EIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMK  360 (451)
T ss_dssp             ---EECGGGGT-TSSCEEEEEEH--------HHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             ---eehhhhhC-CcceEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence               88999865 89999999865        566666544 234567899999998888864211 22333333333344


Q ss_pred             HHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc--CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChh
Q 014936          317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL--DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPY  392 (415)
Q Consensus       317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~  392 (415)
                      +.+.+.+.++|.+. . .+..|.++|+.+.....  +......++...+ .++||.+.|+..|+  +++|+++  ..+++
T Consensus       361 ~~L~~~~~~~~~~~-~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~--~~iRi~~~~~~t~e  435 (451)
T 3oks_A          361 DRLGRLQAEDDRIG-D-VRGRGAMIAMELVKAGTTEPDADLTKALCAGA-HAAGVIVLSCGTYG--NVVRFLPPLSIGDD  435 (451)
T ss_dssp             HHHHHHHHHCTTEE-E-EEEETTEEEEEEBSTTSCCBCHHHHHHHHHHH-HHTTEECEEECTTS--CEEEECCCTTCCHH
T ss_pred             HHHHHHHhhCCCeE-E-EEEeeEEEEEEEecCccCCCCHHHHHHHHHHH-HhCCcEEecCCCCC--CEEEEECCCCCCHH
Confidence            44444444455444 2 34457788887732100  0001234455555 56799999976543  6899987  46899


Q ss_pred             hHHHHHHHHHHHHHH
Q 014936          393 SLEECLDRIKSFYQR  407 (415)
Q Consensus       393 ~l~~~l~~l~~~~~~  407 (415)
                      ++++++++|++++++
T Consensus       436 ~i~~~l~~l~~~l~~  450 (451)
T 3oks_A          436 LLNEGLDVLEEVLRG  450 (451)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhh
Confidence            999999999988753

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.97  E-value=7.4e-30  Score=249.61  Aligned_cols=309  Identities=14%  Similarity=0.108  Sum_probs=229.1

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE--EEeCChHHHHHHHHHHhcCCC--------CEEEEcCCCCcchHHHH
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLSRPG--------ANILLPRPGFPIYELSA  141 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~i~~g~~~al~~~~~~l~~~g--------d~vi~~~p~y~~~~~~~  141 (415)
                      .|....+..++++.+++++.+.+|...+++++  ++|+|+++++..+++++.++|        |+|+++.|+|.++...+
T Consensus       130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~  209 (514)
T 3mad_A          130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA  209 (514)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred             ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence            44444566788888988888888866555788  999999999999999998766        89999999999999999


Q ss_pred             HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC
Q 014936          142 AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG  221 (415)
Q Consensus       142 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~  221 (415)
                      +..|++++.++.+.  ++.+|+++|++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|+++.+.
T Consensus       210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~  284 (514)
T 3mad_A          210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP  284 (514)
T ss_dssp             HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred             HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence            99999999998864  5679999999999989999999999999999966   788888999999999999999987541


Q ss_pred             -----CCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc------------ccCC
Q 014936          222 -----DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD------------ILGD  284 (415)
Q Consensus       222 -----~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~  284 (415)
                           +....++. .......+++.|++|. +.+|.++|++++++        +..........            ..++
T Consensus       285 ~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~gs  354 (514)
T 3mad_A          285 WAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR--------PDLLHYQYFIAADWPGGLYFSPTFAGS  354 (514)
T ss_dssp             HHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS--------HHHHTTTCEEESSCTTCSEEESSSCSS
T ss_pred             hHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC--------HHHhccccccccccCCCcccCCccCCC
Confidence                 21111121 1112234778899998 56778899999876        22222111100            0112


Q ss_pred             chh---HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHH
Q 014936          285 PAT---FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCF  361 (415)
Q Consensus       285 ~~~---~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~  361 (415)
                      .+.   ..+.++...+.   ..++++..+++.++++++.+.|++++++..+ .+..+ ++++..+.      .+..++..
T Consensus       355 ~~~~~~~a~~aal~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~-~~~~~~~~------~~~~~l~~  423 (514)
T 3mad_A          355 RPGALSATAWAAMLSLG---EEGYLDATRRILQAADRLKAGVRAIPSLKIL-GDPLW-VIAVASDE------LNIYQVME  423 (514)
T ss_dssp             CCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTSTTCEES-SCCSS-EEEEECSS------SCHHHHHH
T ss_pred             CchHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCCeE-EEEEeCCC------CCHHHHHH
Confidence            222   23334433342   4678889999999999999999998888843 44444 66665532      24666766


Q ss_pred             HHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHHHHHHH
Q 014936          362 KLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       362 ~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      .+ .++||.+ +|..+  ++++|++++   ++++++++++++|++++++..+
T Consensus       424 ~L-~~~Gi~v-~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~  471 (514)
T 3mad_A          424 EM-AGRGWRL-NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA  471 (514)
T ss_dssp             HH-HTTTCBC-EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred             HH-HhcCCEe-ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            66 4569987 44332  578999995   4579999999999999987654

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.97  E-value=5.1e-31  Score=246.63  Aligned_cols=325  Identities=13%  Similarity=0.106  Sum_probs=224.3

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-c-EEE
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-D-VFV  105 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~-i~i  105 (415)
                      .++.+..|.      .++++.+++++.+.+....        ...|.  .+..++++++.+.+++.+|.  +++ + +++
T Consensus         4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~   73 (362)
T 2c0r_A            4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFI   73 (362)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred             ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence            356666663      6778999999998875310        01111  12345566666666666663  443 5 567


Q ss_pred             eCChHHHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHHhCCCeEEEeeccCCCCC--CCChhHHHhhcCCCceEEEecC
Q 014936          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGW--EVDLDDIESLADQNTVALVIIN  181 (415)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~i~~  181 (415)
                      |+|+++++..++.+++++||+|++..+.++..  ...++..| +++.++.+++.++  .+|.++++  +++++++|++++
T Consensus        74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~  150 (362)
T 2c0r_A           74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS  150 (362)
T ss_dssp             SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred             CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence            89999999999999999999999887765543  35667789 9998887532223  34655544  677899999999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      |+||||..++  ++++|      +|+++|+|++|+.+..    +..+...     .+++.|+||+++++|  +||+++++
T Consensus       151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~----~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~  211 (362)
T 2c0r_A          151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILSR----PFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE  211 (362)
T ss_dssp             EETTTTEECS--SCCCC------TTSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred             CcCccceecc--ccccc------CCCEEEEEChhhccCC----ccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence            9999999754  34554      7999999999987432    1222222     277789999998888  99999976


Q ss_pred             CCCCCChHHHHHHHHh-------------hccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          262 PCGMFRKPKVVERMKK-------------YFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                      +        +++.+..             .....++++...+.++..+|+...+. .+++.+++++++++++.+.|++++
T Consensus       212 ~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  283 (362)
T 2c0r_A          212 D--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG  283 (362)
T ss_dssp             G--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             H--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            3        2221111             11223567778888888888643222 678899999999999999999985


Q ss_pred             CC-cCCCCC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHH
Q 014936          328 CI-SCPHKP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIK  402 (415)
Q Consensus       328 ~~-~~~~~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~  402 (415)
                      ++ .+...+  ..+.++++.++..     .+..++...| .++||.+.+|..+  .+++|||++  .++++++.+++.|+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~  355 (362)
T 2c0r_A          284 GFYRGCVDVDSRSDMNITFRLASE-----ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFME  355 (362)
T ss_dssp             TSSEESSCGGGBCSSEEEEECSCH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CccccCCChHHcCCcEEEEEcCCc-----chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHH
Confidence            35 522111  2345677777531     1345666654 6779998888765  468999996  47899999999999


Q ss_pred             HHHHHH
Q 014936          403 SFYQRH  408 (415)
Q Consensus       403 ~~~~~~  408 (415)
                      ++++++
T Consensus       356 ~~~~~~  361 (362)
T 2c0r_A          356 HFKRSR  361 (362)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            887653

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.97  E-value=4.5e-31  Score=246.73  Aligned_cols=328  Identities=13%  Similarity=0.026  Sum_probs=222.7

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      -....++.+.+.    ++++|.+++++.+.+.   ...|++..+..++++.++++++        .+..++++|+++++.
T Consensus        13 ~~~~~~~~~~~~----~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~g~~a~~   77 (359)
T 3pj0_A           13 TPYKLGGNGPRN----VGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILG--------KQSAVFFPSGTMAQQ   77 (359)
T ss_dssp             CSEESSSSSCCB----HHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHH
T ss_pred             cchhhcCCCccc----cCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHH
Confidence            334445555421    4567888888877432   2356666678999999999983        233466688899999


Q ss_pred             HHHHHhcCCCCE--EEEcCCCCcchH---HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCcc-cc
Q 014936          115 VAMALLSRPGAN--ILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC-GN  188 (415)
Q Consensus       115 ~~~~~l~~~gd~--vi~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt-G~  188 (415)
                      +++.++.++||.  |+++.++|....   ......|.+++.++.   +++.+|+++++++ .++++++++++|+||+ |.
T Consensus        78 ~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~  153 (359)
T 3pj0_A           78 IALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQ  153 (359)
T ss_dssp             HHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSB
T ss_pred             HHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCcc
Confidence            999999888886  555555554322   222456889888775   3457899999988 7789999999999998 79


Q ss_pred             CCCHHHHHHHHHHHhhcCcEEEEccccCCccc--CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936          189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF  266 (415)
Q Consensus       189 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  266 (415)
                      +++.+++++|+++|++||+++|+|++|..+..  .+.....+.   .... +++.|+||+++.++.  ||++.++     
T Consensus       154 ~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~g--g~~~~~~-----  222 (359)
T 3pj0_A          154 LPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIAG--AILAGND-----  222 (359)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSSC--EEEEECH-----
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcce--EEEECCH-----
Confidence            99999999999999999999999999876442  122211221   1112 455689998766532  7777654     


Q ss_pred             ChHHHHHHHHhhcc-ccCC--chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEE
Q 014936          267 RKPKVVERMKKYFD-ILGD--PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVML  343 (415)
Q Consensus       267 ~~~~~~~~~~~~~~-~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~  343 (415)
                         ++++.++.... ....  .......++...++.    .. +..+++.++++.+.+.|+++|++.+...|..++++|+
T Consensus       223 ---~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~  294 (359)
T 3pj0_A          223 ---DFVQEAKIWKRRYGGDLISLYPYILSADYYFEK----RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHV  294 (359)
T ss_dssp             ---HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH----HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEE
T ss_pred             ---HHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHH----HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEE
Confidence               67877765421 1111  122222333334432    22 4445677888999999999888873235677888888


Q ss_pred             ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEee-----CChhhHHHHHHHHHHH
Q 014936          344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA-----VDPYSLEECLDRIKSF  404 (415)
Q Consensus       344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-----~~~~~l~~~l~~l~~~  404 (415)
                      +++....    .+.+.+.+.+.++||.+.||..|+.  .+++|++++     .+.+++++++++|.+.
T Consensus       295 ~~~~~~~----~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          295 YFENSAD----EIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             EESSCHH----HHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             EecCccc----hhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence            8764110    1233444455778999999987654  358999885     4678999999998764

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.97  E-value=5.5e-30  Score=245.65  Aligned_cols=328  Identities=13%  Similarity=0.131  Sum_probs=222.8

Q ss_pred             CcceeEeccc-CCCCCCCCCCcHHHHHHHHHH---HhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           34 EKKVISLAMG-DPTVHSCFHTTHVATEAVAEA---LLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        34 ~~~~i~l~~g-~~~~~~~~~~~~~~~~a~~~~---~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      +..+++++.| +|+    +++++.+.++....   ........|+. .|.+ +++++++++.+..|    .+++++++||
T Consensus        88 ~~~~i~l~~g~~~~----~~~~~~i~~a~~~~~~~~~~~~~~~Y~~-~g~~-~~~~l~~~la~~~g----~~~~i~~~sG  157 (464)
T 1ibj_A           88 STLLVNLDNKFDPF----DAMSTPLYQTATFKQPSAIENGPYDYTR-SGNP-TRDALESLLAKLDK----ADRAFCFTSG  157 (464)
T ss_dssp             HHHHTCCCCSSCTT----CCSSCCCCCCSBCCCSSSSCCCSCSBTT-TCCH-HHHHHHHHHHHHHT----CSEEEEESSH
T ss_pred             CCeEEECCCCCCCC----CCCCccHHhhhhhhhhcccccCCccccC-CCCH-HHHHHHHHHHHHhC----CCeEEEECCH
Confidence            3457888887 543    55566566555432   11122345663 4555 67777777776555    2478888888


Q ss_pred             HHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936          110 TQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP  185 (415)
Q Consensus       110 ~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np  185 (415)
                      ++++..++. ++++||+|+++.|+|+++...    ++..|++++.++.+       |++++++++++++++|++++|+||
T Consensus       158 t~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Np  229 (464)
T 1ibj_A          158 MAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNP  229 (464)
T ss_dssp             HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTT
T ss_pred             HHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCC
Confidence            999998885 779999999999999988754    46679999888752       799999999989999999999999


Q ss_pred             cccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCC
Q 014936          186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCG  264 (415)
Q Consensus       186 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~  264 (415)
                      ||.+++   +++|+++|+++|+++|+||+|....    ...++. +   +..+++.|+||.|+. +|+|+||+++++   
T Consensus       230 tG~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~---  295 (464)
T 1ibj_A          230 RQQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG---  295 (464)
T ss_dssp             TCCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECS---
T ss_pred             CCEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh-c---CCEEEEECCcccccCCCCCcEEEEEECh---
Confidence            999985   7888999999999999999997632    111222 2   345899999998765 489999999964   


Q ss_pred             CCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH----------HhhcCCCCcCCC
Q 014936          265 MFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN----------KIKEIPCISCPH  333 (415)
Q Consensus       265 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~----------~l~~~~~~~~~~  333 (415)
                          +++++.+..... ..++.++..+.++...++.. ...+++..+......+++.+          .|+++|++.+. 
T Consensus       296 ----~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~-~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-  369 (464)
T 1ibj_A          296 ----EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM-ALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLH-  369 (464)
T ss_dssp             ----HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHH-
T ss_pred             ----HHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhH-HHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHH-
Confidence                246677765532 34556788888888888642 12233332223333333322          23333444422 


Q ss_pred             CCC---CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC------------CC----------CC-CCeEEEEe
Q 014936          334 KPE---GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT------------AV----------GL-KNWLRVTF  387 (415)
Q Consensus       334 ~p~---~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~------------~~----------~~-~~~iRi~~  387 (415)
                      .|.   .|.++++.++.     ......++.. |+..||.+++|.            .+          +. ++++|+++
T Consensus       370 ~~~~~g~g~~~~~~l~~-----~~~~~~~~~~-L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsv  443 (464)
T 1ibj_A          370 FSQAKGAGSVFSFITGS-----VALSKHLVET-TKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISA  443 (464)
T ss_dssp             TTTCSCCCSEEEEECSC-----HHHHHHHHHH-CSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEEC
T ss_pred             hccCCCCceEEEEEECC-----HHHHHHHHHh-cCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEe
Confidence            332   35678877741     0012234444 355788888875            11          22 47899999


Q ss_pred             eCChhhHHHHHHHHHHHHHH
Q 014936          388 AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       388 ~~~~~~l~~~l~~l~~~~~~  407 (415)
                      +.  |++++++++|++++++
T Consensus       444 g~--edi~~li~~L~~al~~  461 (464)
T 1ibj_A          444 GI--EDVDDLISDLDIAFKT  461 (464)
T ss_dssp             CS--SCHHHHHHHHHHHHHS
T ss_pred             CC--CCHHHHHHHHHHHHhh
Confidence            88  8999999999988753

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.97  E-value=9.9e-29  Score=235.60  Aligned_cols=319  Identities=15%  Similarity=0.187  Sum_probs=224.3

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCC----cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEE
Q 014936           53 TTHVATEAVAEALLSEKFNGYAPTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANI  127 (415)
Q Consensus        53 ~~~~~~~a~~~~~~~~~~~~y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~v  127 (415)
                      .++.+++++.+.+.......|++..|    ..++++.+++++    |  ++  ++++++++++++..++.++ .++||+|
T Consensus        14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~----g--~~--~~i~~~~gt~al~~~~~~~~~~~gd~V   85 (418)
T 2c81_A           14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN----G--VP--YCVPTTSGSTALMLALEALGIGEGDEV   85 (418)
T ss_dssp             CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH----T--CS--EEEEESCHHHHHHHHHHHTTCCTTCEE
T ss_pred             CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh----C--CC--cEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence            47899999999987655444777667    455666666655    3  22  5777888899999999999 8999999


Q ss_pred             EEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCc
Q 014936          128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT  207 (415)
Q Consensus       128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~  207 (415)
                      +++.|+|.++...++..|++++.+++++ +++.+|+++|++.+++++++|+++   ||||..   .++++|.++|+++|+
T Consensus        86 l~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~---~~~~~i~~~~~~~~~  158 (418)
T 2c81_A           86 IVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSM---ANMDEINEIAQEHNL  158 (418)
T ss_dssp             EEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCC---CCHHHHHHHHHHTTC
T ss_pred             EECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCc---ccHHHHHHHHHHCCC
Confidence            9999999999999999999999998854 356799999999998888887765   478987   568899999999999


Q ss_pred             EEEEccccCCcc-cCCCCcccccccCCCCCeEEEccC--ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc--
Q 014936          208 LVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL--  282 (415)
Q Consensus       208 ~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--  282 (415)
                      ++|+|++|+.+. +++..   +..+.    .+.+.||  ||.++. | |+||+++++       +++++.++......  
T Consensus       159 ~li~D~a~~~~~~~~~~~---~~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~-------~~l~~~~~~~~~~~~~  222 (418)
T 2c81_A          159 FVIEDCAQSHGSVWNNQR---AGTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKN-------PRLFELIQQLRADSRV  222 (418)
T ss_dssp             EEEEECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHHHBTTEE
T ss_pred             EEEEECcccccCccCCEe---ccccc----ceEEEeccCCcccCC-C-CeEEEEECC-------HHHHHHHHHHHHhCcc
Confidence            999999999876 54322   22222    1666777  999877 7 999999853       24666665432110  


Q ss_pred             -----------CC--c-----------hhHHHHHHH-HhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          283 -----------GD--P-----------ATFIQAAVP-SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       283 -----------~~--~-----------~~~~~~a~~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                                 ..  .           ....+.++. ..++     .+++..++.+++++++.+.|+++|++.+...|.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~  297 (418)
T 2c81_A          223 YCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ-----ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ  297 (418)
T ss_dssp             ECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred             ccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence                       00  0           011122221 2232     3566777788888999999998888873323444


Q ss_pred             -ceE---EE-EecCccccCCCCCHHHHHHHHHhhcCeE---EEcCCCCC----------------------------C--
Q 014936          338 -SMA---VM-LKLNLSLLDDIIDDIDFCFKLAKEESVI---ILPGTAVG----------------------------L--  379 (415)
Q Consensus       338 -g~~---~~-~~l~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~~----------------------------~--  379 (415)
                       +..   ++ +.++.....+ .+..++...|.+++||.   +.++..+.                            .  
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (418)
T 2c81_A          298 VSRQTYYGYVFRFDPVKFGG-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYP  376 (418)
T ss_dssp             EEECCCSEEEEEECGGGTTT-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCH
T ss_pred             CcccccEEEEEEEccccccc-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCCh
Confidence             222   22 5554210001 24667777765444999   88875220                            0  


Q ss_pred             ------CCeEEEEe--eC-ChhhHHHHHHHHHHHHHHH
Q 014936          380 ------KNWLRVTF--AV-DPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       380 ------~~~iRi~~--~~-~~~~l~~~l~~l~~~~~~~  408 (415)
                            .+.||+++  .+ ++++++.+++.|+++++++
T Consensus       377 ~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~  414 (418)
T 2c81_A          377 VSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKF  414 (418)
T ss_dssp             HHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence                  14799999  47 8999999999999887653

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.97  E-value=2.9e-29  Score=237.35  Aligned_cols=323  Identities=12%  Similarity=0.075  Sum_probs=232.0

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      ++|+|+.  |.    +  ++.+++++.+.+....   |.+..+..++|+.++++++        .+++++++|+++++..
T Consensus         9 ~~i~~~~--p~----~--~~~~~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~   69 (393)
T 1mdo_A            9 DFLPFSR--PA----M--GAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI   69 (393)
T ss_dssp             CCBCSCC--CC----C--CHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred             cccccCC--CC----C--CHHHHHHHHHHHhcCC---cCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence            3567765  32    3  3678899988887542   3344678999999999983        3589999999999999


Q ss_pred             HHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          116 AMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       116 ~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      ++.++ .++||+|+++.|+|+++...++..|++++.++.++ +++.+|++++++.+++++++|++++   |||...   +
T Consensus        70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~---~~G~~~---~  142 (393)
T 1mdo_A           70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPVH---YAGAPA---D  142 (393)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCBC---GGGCCC---C
T ss_pred             HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEeC---CCCCcC---C
Confidence            99999 89999999999999999999999999999998864 3467999999999988888877754   799985   4


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCc-ccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      +++|.++|+++|+++|+|++|+.+ .+.+.   ++   +.  ..+++.|+||...++|.|+||+++++       +++.+
T Consensus       143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~-------~~~~~  207 (393)
T 1mdo_A          143 LDAIYALGERYGIPVIEDAAHATGTSYKGR---HI---GA--RGTAIFSFHAIKNITCAEGGIVVTDN-------PQFAD  207 (393)
T ss_dssp             HHHHHHHHHHHTCCBCEECTTCTTCEETTE---ET---TS--SSEEEEECCTTSSSCSSSCEEEEESC-------HHHHH
T ss_pred             HHHHHHHHHHcCCeEEEECccccCCeECCe---ec---CC--CCeEEEeCCCCCccccccceEEEeCC-------HHHHH
Confidence            888889999999999999999964 33321   11   11  34888999943345556899999863       25666


Q ss_pred             HHHhhcccc-------------------------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936          274 RMKKYFDIL-------------------------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC  328 (415)
Q Consensus       274 ~~~~~~~~~-------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  328 (415)
                      .+.......                         ...+++...++...++     .+++..++.+++++++.+.|++++ 
T Consensus       208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~-  281 (393)
T 1mdo_A          208 KLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-----KLDALNARRAAIAAQYHQAMADLP-  281 (393)
T ss_dssp             HHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHTSS-
T ss_pred             HHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCC-
Confidence            665432211                         1123343333333443     255666777788888999998885 


Q ss_pred             CcCCCCC-----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC--------------CC-------CCe
Q 014936          329 ISCPHKP-----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV--------------GL-------KNW  382 (415)
Q Consensus       329 ~~~~~~p-----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~--------------~~-------~~~  382 (415)
                      +.....|     .+++++|+.++.... + .+..++...+ .++||.+.+|..+              ..       ..+
T Consensus       282 ~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (393)
T 1mdo_A          282 FQPLSLPSWEHIHAWHLFIIRVDEARC-G-ITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERI  358 (393)
T ss_dssp             CEECCCCSSCEECCCSCEEEECCHHHH-S-SCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTE
T ss_pred             cccccCCCCCCCceeEEEEEEeccccc-c-cCHHHHHHHH-HhCCCCcccccCccccChhhhccCCccCChhHHHHHhCE
Confidence            6532123     455678888863100 0 1456666665 5679999988754              11       347


Q ss_pred             EEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          383 LRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       383 iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +|+++.  .++++++.+++.|+++++..
T Consensus       359 lRi~~~~~~t~~~i~~~~~~l~~~~~~~  386 (393)
T 1mdo_A          359 CSLPLFPDMTESDFDRVITALHQIAGQG  386 (393)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred             EEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            999996  68999999999999887653

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.97  E-value=6.3e-30  Score=245.86  Aligned_cols=348  Identities=14%  Similarity=0.068  Sum_probs=221.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +++.++||..|......+. .+|.+.+++.+++....  .|....+..+.++++++++.+..+  ...+++++++|+++|
T Consensus        42 ~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA  116 (448)
T 3dod_A           42 NGKEYYDGFSSVWLNVHGH-RKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEA  116 (448)
T ss_dssp             TSCEEEETTHHHHTCSSCB-SCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence            4778999998753222222 47999999999987542  233334455677777777776554  345899999999999


Q ss_pred             HHHHHHHhcC----CC----CEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCC----------
Q 014936          113 IDVAMALLSR----PG----ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV----------  161 (415)
Q Consensus       113 l~~~~~~l~~----~g----d~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~----------  161 (415)
                      +..+++++..    +|    |+|++.+|+|+++...+...+.             .+..++.  .+.+..          
T Consensus       117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  194 (448)
T 3dod_A          117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECRD  194 (448)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhhH
Confidence            9999999865    44    9999999999887654433322             1222222  122222          


Q ss_pred             -ChhHHHhhcC--CCceEEEecCC-C-Ccccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          162 -DLDDIESLAD--QNTVALVIINP-G-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       162 -~~~~l~~~~~--~~~~~v~i~~p-~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                       |+++|+++++  +...++++++| + |++|. +++.+.+++|.++|++||+++|+||+|.++.+.|... ....++...
T Consensus       195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~  273 (448)
T 3dod_A          195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP  273 (448)
T ss_dssp             HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence             3788888886  33444555555 5 77774 5788889999999999999999999999876655432 222233222


Q ss_pred             CeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHh-------h-ccccCCchhHHHHHHHHhhCCCc-HHHH
Q 014936          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------Y-FDILGDPATFIQAAVPSILQQPD-EVFF  305 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~  305 (415)
                      +   +.+|||+++. | +|+||+++++        ++++.+..       . ...+++.+++++.++.++|+... ++.+
T Consensus       274 d---i~t~sK~l~~-G~~~ig~v~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~  341 (448)
T 3dod_A          274 D---LMAAGKGITG-GYLPIAVTFATE--------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIV  341 (448)
T ss_dssp             S---EEEECGGGGT-TSSCCEEEEEEH--------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred             C---EEEecccccC-CcCceEEEEECH--------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHH
Confidence            2   3368999754 8 5999999975        67777765       2 22356778999999988886421 1233


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC--C---C-HHHHHHHHHhhcCeEEEcCCCCCC
Q 014936          306 KKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI--I---D-DIDFCFKLAKEESVIILPGTAVGL  379 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~--~---~-~~~~~~~ll~~~gi~v~~g~~~~~  379 (415)
                      ++.++..+..++.+.+ +..+|.+. . .+..|.++|+.+........  .   . ..++...++ ++||.+.|+.    
T Consensus       342 ~~~~~~~~~~~~~l~~-l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----  413 (448)
T 3dod_A          342 EQVAEKSKKLHFLLQD-LHALPHVG-D-IRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPLG----  413 (448)
T ss_dssp             HHHHHHHHHHHHHHHH-HTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEET----
T ss_pred             HHHHHHHHHHHHHHHH-HhcCCCeE-E-EEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEeccC----
Confidence            3444444444444544 44554333 2 33457788887754211000  0   0 245666665 5699998872    


Q ss_pred             CCeEEEEe--eCChhhHHHHHHHHHHHHHHHH
Q 014936          380 KNWLRVTF--AVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       380 ~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                       +++||++  ..+++++++++++|++++++..
T Consensus       414 -~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~  444 (448)
T 3dod_A          414 -DVIAFLPPLASTAEELSEMVAIMKQAIHEVT  444 (448)
T ss_dssp             -TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -CEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence             7999966  5789999999999999998754

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.97  E-value=1e-29  Score=242.34  Aligned_cols=319  Identities=13%  Similarity=0.075  Sum_probs=224.5

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~--------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      ++.+.|+.+.+.     +.++.+.+++.+.+... +..+.        ......++++.+++++      ++++++|++|
T Consensus        27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~   94 (416)
T 1qz9_A           27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVT   94 (416)
T ss_dssp             TTCEECCTTTSC-----CCBTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEEC
T ss_pred             CCeEeecCCCcC-----CCcHHHHHHHHHHHHHH-HhccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEe
Confidence            456788877632     45778999999988642 11111        0133456777777766      3567899999


Q ss_pred             CChHHHHHHHHHHhc------CCCCE-EEEcCCCCcchHHH----HHhC--CCeEEEeeccCCCCCCCChhHHHhhcCCC
Q 014936          107 SGCTQAIDVAMALLS------RPGAN-ILLPRPGFPIYELS----AAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQN  173 (415)
Q Consensus       107 ~g~~~al~~~~~~l~------~~gd~-vi~~~p~y~~~~~~----~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~  173 (415)
                      +|+++++..++.++.      ++||+ |+++.++|+.+...    ++..  |++++.++.         +++|+++++++
T Consensus        95 ~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~  165 (416)
T 1qz9_A           95 DTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQD  165 (416)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTT
T ss_pred             CChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCC
Confidence            999999998888876      88987 55556677765443    2333  888888764         78889888888


Q ss_pred             ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      ++++++++|+||||.+++   +++|.++|+++|+++|+|++|+...    ....+..++.   .+++.|+||++ .+|.+
T Consensus       166 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~~~---d~~~~s~~K~l-~~g~~  234 (416)
T 1qz9_A          166 TAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA----VPVDLHQAGA---DYAIGCTYKYL-NGGPG  234 (416)
T ss_dssp             EEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCHHHHTC---SEEEECSSSTT-CCCTT
T ss_pred             ceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccC----cCCChhhcCC---CEEEecCcccC-CCCCC
Confidence            999999999999999987   7888889999999999999998522    2222223332   37888999984 56777


Q ss_pred             E-EEEEeeCCCCCCChHHHHHHHHhh------------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936          254 L-GWFVTTDPCGMFRKPKVVERMKKY------------------------FDILGDPATFIQAAVPSILQQPDEVFFKKT  308 (415)
Q Consensus       254 ~-G~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  308 (415)
                      + |+++++++        +++.+...                        ....++.+...+.++.++++.....++++.
T Consensus       235 ~~g~l~~~~~--------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~  306 (416)
T 1qz9_A          235 SQAFVWVSPQ--------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASL  306 (416)
T ss_dssp             CCCEEEECTT--------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred             CeEEEEECHH--------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence            7 99998763        22222211                        111235566666666666543222357788


Q ss_pred             HHHHHHHHHHHHHHhhcC-C--CCcCCCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCC
Q 014936          309 LNLLKQSVDICYNKIKEI-P--CISCPHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKN  381 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~-~--~~~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~  381 (415)
                      .++++++++++.+.|+++ |  ++.++ .|.    .+.++|+.++        +..++...+ .++||.+...    ..+
T Consensus       307 ~~~~~~~~~~l~~~L~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~--------~~~~l~~~l-~~~gi~~~~~----~~~  372 (416)
T 1qz9_A          307 RRKSLALTDLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPR  372 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTT
T ss_pred             HHHHHHHHHHHHHHHHhhccCCCeEEe-CCCCHHHcCCEEEEecC--------CHHHHHHHH-HhCCcEeccC----CCC
Confidence            899999999999999875 6  77733 443    3567888775        255666666 4669987532    358


Q ss_pred             eEEEEee---CChhhHHHHHHHHHHHHHH
Q 014936          382 WLRVTFA---VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       382 ~iRi~~~---~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++||+++   ++++++++++++|++++++
T Consensus       373 ~lRis~~~~~~t~~~i~~~~~~l~~~~~~  401 (416)
T 1qz9_A          373 IMRFGFTPLYTTFTEVWDAVQILGEILDR  401 (416)
T ss_dssp             EEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence            9999996   4899999999999998875

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.97  E-value=1.7e-30  Score=249.69  Aligned_cols=339  Identities=12%  Similarity=0.043  Sum_probs=232.2

Q ss_pred             cCc--ceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCC---CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           33 NEK--KVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        33 ~~~--~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~---~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      +|+  .++||..|.....  ++ .+|.+.+++.+++.....   ..|+ .....+|++.+++++      +...++++++
T Consensus        71 dG~~~~ylD~~s~~~~~~--lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~~L~e~la~~~------~~~~~~v~~~  141 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWTAI--HGHGHPALDQALTTQLRVMNHVMFGGLT-HEPAARLAKLLVDIT------PAGLDTVFFS  141 (457)
T ss_dssp             TTEEEEEEETTHHHHTCT--TCBTCHHHHHHHHHHHHHCSCCCSSSEE-CHHHHHHHHHHHHHS------STTEEEEEEE
T ss_pred             CCCeeEEEECCCcHhhhc--cCCCCHHHHHHHHHHHHhccCccccccC-CHHHHHHHHHHHHhC------CCCcCEEEEe
Confidence            577  8999988742111  22 589999999998875322   1222 233456666666665      3456799999


Q ss_pred             CChHHHHHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccCCCCCCCChh
Q 014936          107 SGCTQAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPDKGWEVDLD  164 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~-------~g-d~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~  164 (415)
                      +|++++++.+++.+..       +| +.|++.+++|+++...+...+.              .+..++.........|++
T Consensus       142 ~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~  221 (457)
T 3tfu_A          142 DSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSA  221 (457)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHH
Confidence            9999999999998864       55 4899999999987665554421              223333322111123788


Q ss_pred             HHHhhcC---CCceEEEecC-CCCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936          165 DIESLAD---QNTVALVIIN-PGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (415)
Q Consensus       165 ~l~~~~~---~~~~~v~i~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  239 (415)
                      +|+++++   ++++++++.. ++|++|.++ +.+.+++|.++|++||+++|+||+|.++...|... .+..++...+++ 
T Consensus       222 ~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii-  299 (457)
T 3tfu_A          222 AFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM-  299 (457)
T ss_dssp             HHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE-
T ss_pred             HHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE-
Confidence            8998886   4556666666 689999875 78889999999999999999999999876655422 222233333333 


Q ss_pred             EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK  313 (415)
Q Consensus       240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  313 (415)
                        ||||.++.+.+|+||+++++        ++++.+...      ...+++.+++++.++.++|+...+   +...++++
T Consensus       300 --t~sK~l~gG~~~lG~v~~~~--------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~  366 (457)
T 3tfu_A          300 --CVGKALTGGYLSLAATLCTA--------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRIT  366 (457)
T ss_dssp             --EECGGGGTTSSCCEEEEEEH--------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHH
T ss_pred             --EEChhhhCCCcceEEEEEcH--------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHH
Confidence              88998644337999999976        688877521      123467789999988888863111   24456666


Q ss_pred             HHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--e
Q 014936          314 QSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--A  388 (415)
Q Consensus       314 ~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~  388 (415)
                      ++.+++.+.|+++   +++. . .+..|+++++.++..     .+..++...++ ++||.+.|..     +++||++  .
T Consensus       367 ~~~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~l~~~-----~~~~~~~~~l~-~~Gv~v~~~~-----~~lRi~p~~~  433 (457)
T 3tfu_A          367 ELAAGLTAGLDTARALPAVT-D-VRVCGAIGVIECDRP-----VDLAVATPAAL-DRGVWLRPFR-----NLVYAMPPYI  433 (457)
T ss_dssp             HHHHHHHHHHGGGGGSTTEE-E-EEECSSCEEEEESSC-----CCHHHHHHHHH-HTTEECCCBT-----TEEEECCCTT
T ss_pred             HHHHHHHHHHHHHhcCCCee-e-eecCCeEEEEEECCc-----ccHHHHHHHHH-HCCeEEEecC-----CEEEEECCCC
Confidence            7777777777654   3443 2 244577888888642     13566777665 5599998743     7899987  4


Q ss_pred             CChhhHHHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .+++++++++++|++++++.
T Consensus       434 ~t~eei~~~l~~L~~~l~~~  453 (457)
T 3tfu_A          434 CTPAEITQITSAMVEVARLV  453 (457)
T ss_dssp             CCHHHHHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHh
Confidence            68999999999999998764

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.97  E-value=3e-30  Score=246.88  Aligned_cols=342  Identities=15%  Similarity=0.070  Sum_probs=228.7

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++||..|.....  ++ .+|.+++++.+++.......|++ ....+|++.+++++      + .++++++++|++
T Consensus        50 ~~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~~Gs  119 (429)
T 3k28_A           50 IDGNEYIDYVLSWGPLI--HGHANDRVVEALKAVAERGTSFGAPT-EIENKLAKLVIERV------P-SIEIVRMVNSGT  119 (429)
T ss_dssp             TTCCEEEESCGGGTTCT--TCBSCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHS------T-TCSEEEEESSHH
T ss_pred             CCCCEEEECCCChhhcc--cCCCCHHHHHHHHHHHhhCcCcCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCChH
Confidence            35788999998864322  33 58999999999887654434544 45678888888876      2 578999999999


Q ss_pred             HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHh-CCCeEEEeeccCCCCCC------------CChhHHHhhcCC--C
Q 014936          111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGWE------------VDLDDIESLADQ--N  173 (415)
Q Consensus       111 ~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~------------~~~~~l~~~~~~--~  173 (415)
                      ++++.+++.+..  +++.|++.+|+|+++...+.. .|..+..+......+..            -|+++|+++++.  .
T Consensus       120 ea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~  199 (429)
T 3k28_A          120 EATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD  199 (429)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC
Confidence            999999988763  568999999999876544332 22222111111001100            178899888763  3


Q ss_pred             ceEEEecCCC-CccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936          174 TVALVIINPG-NPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (415)
Q Consensus       174 ~~~v~i~~p~-nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  251 (415)
                      ..++++++|. |++|.+ .+.+.+++|.++|++||+++|+||+|.++ ..+... ....++...+   +.|+||.++ +|
T Consensus       200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G  273 (429)
T 3k28_A          200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVTPD---LTCLGKVIG-GG  273 (429)
T ss_dssp             GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCCCS---EEEECGGGG-TT
T ss_pred             CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCCCc---eehhhhhhc-CC
Confidence            4455666664 455655 46888999999999999999999999887 444321 1222222222   347899986 49


Q ss_pred             ceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc--
Q 014936          252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE--  325 (415)
Q Consensus       252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~--  325 (415)
                      +|+||+++++        ++++.+...    ...+++.+++++.++.++|+...    ++..++++++++++.+.|++  
T Consensus       274 ~~iG~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~  341 (429)
T 3k28_A          274 LPVGAYGGKA--------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAA  341 (429)
T ss_dssp             SCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEcH--------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999865        576666442    22346788999999999998653    45566666666666666654  


Q ss_pred             --CCCCcCCCCCCCceEEEEecCcccc--------CCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHH
Q 014936          326 --IPCISCPHKPEGSMAVMLKLNLSLL--------DDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLE  395 (415)
Q Consensus       326 --~~~~~~~~~p~~g~~~~~~l~~~~~--------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~  395 (415)
                        .+.+. . .+..|.++++.+.....        ++.....++...+ .++||.+.|+.    .+.+|+++..++++++
T Consensus       342 ~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~r~~~~~t~e~i~  414 (429)
T 3k28_A          342 EKHGIPH-H-INRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREM-VEQGVFLPPSQ----FEGLFLSTVHSDADIE  414 (429)
T ss_dssp             HHTTCCC-E-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSST----TSCBCCCTTCCHHHHH
T ss_pred             hhCCCCE-E-EEeeccEEEEEEecCCcccccccccccHHHHHHHHHHH-HHCCeEEecCC----CCCEEEECCCCHHHHH
Confidence              33333 2 34556677776643110        0000124555555 46799999874    3678998888999999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRH  408 (415)
Q Consensus       396 ~~l~~l~~~~~~~  408 (415)
                      +++++|+++++++
T Consensus       415 ~~l~~l~~~l~~~  427 (429)
T 3k28_A          415 ATIAAAEIAMSKL  427 (429)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988653

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.97  E-value=1.6e-29  Score=243.29  Aligned_cols=345  Identities=15%  Similarity=0.135  Sum_probs=231.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .++.++|+..+.+....++. +|.+++++.+.+....   +... .+..++++.+++.+.+..+  .++++|++++|+++
T Consensus        48 ~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggse  121 (449)
T 3a8u_X           48 KGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSE  121 (449)
T ss_dssp             TCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHH
T ss_pred             CCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence            46678899777532222223 7999999999886532   1111 2333455566666655433  46789999999999


Q ss_pred             HHHHHHHHhcC--------CCCEEEEcCCCCcchHH-HHHhCCC------------eEEEeeccC--CCC-CCCC-----
Q 014936          112 AIDVAMALLSR--------PGANILLPRPGFPIYEL-SAAFRHI------------EVRHFDLLP--DKG-WEVD-----  162 (415)
Q Consensus       112 al~~~~~~l~~--------~gd~vi~~~p~y~~~~~-~~~~~g~------------~~~~~~~~~--~~~-~~~~-----  162 (415)
                      +++.+++++..        +||+|++.+|+|++... .....|.            .+..++.+.  ..+ .++|     
T Consensus       122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~  201 (449)
T 3a8u_X          122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG  201 (449)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence            99999998763        67999999999997654 3443331            234444321  111 1245     


Q ss_pred             ---hhHHHhhcCC---CceEEEecCCC-Ccccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936          163 ---LDDIESLADQ---NTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (415)
Q Consensus       163 ---~~~l~~~~~~---~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  234 (415)
                         +++|+++++.   ...++++++|+ |+||. ..+.+.+++|.++|++||+++|+||+|.++...+.. ..+..++..
T Consensus       202 ~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~  280 (449)
T 3a8u_X          202 IALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFGVT  280 (449)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcCCC
Confidence               8999988862   23355667774 67997 567999999999999999999999999876544432 122222222


Q ss_pred             CCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh----------ccccCCchhHHHHHHHHhhCCCcHH
Q 014936          235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY----------FDILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      .+++   |+||.++. | +|+||+++++        ++++.+...          ...+.+.+++++.++.++|+...+ 
T Consensus       281 ~di~---s~sK~l~~-G~~~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-  347 (449)
T 3a8u_X          281 PDLM---CIAKQVTN-GAIPMGAVIAST--------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK-  347 (449)
T ss_dssp             CSEE---EECGGGGT-TSSCCEEEEEEH--------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred             CCEE---EEcccccC-CCCceEEEEECH--------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-
Confidence            2233   88999864 7 9999999865        677777653          122456788888888888863211 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCccccCCCC--CHHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLSLLDDII--DDIDFCFKLAKEESVIILPGTAVGLK  380 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~~~~~~~--~~~~~~~~ll~~~gi~v~~g~~~~~~  380 (415)
                        +...++++++++++.+.|++++.+..+ ..+..|+++|+.++....  ..  +..++...++ ++||.+.|+.     
T Consensus       348 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~l~-~~Gv~v~~~g-----  417 (449)
T 3a8u_X          348 --ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDG--DAIVRPFEAGMALW-KAGFYVRFGG-----  417 (449)
T ss_dssp             --TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTT--BSSHHHHHHHHHHH-HHTEECEEET-----
T ss_pred             --cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcc--cccccHHHHHHHHH-HCCcEEecCC-----
Confidence              246677888888888888775333311 124567889998864210  00  1225666665 5699999872     


Q ss_pred             CeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          381 NWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       381 ~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      +++||++  ..+++++++++++|++++++
T Consensus       418 ~~iRis~~~~~t~~~i~~~l~~l~~~l~~  446 (449)
T 3a8u_X          418 DTLQFGPTFNSKPQDLDRLFDAVGEVLNK  446 (449)
T ss_dssp             TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence            7899996  57899999999999998765

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.97  E-value=2.4e-29  Score=236.35  Aligned_cols=323  Identities=15%  Similarity=0.156  Sum_probs=229.8

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.++++++.+.|.      ..+ +++++.+.+...   .|.+..+..++|+.++++++        .+++++++||++++
T Consensus         5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~   66 (374)
T 3uwc_A            5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL   66 (374)
T ss_dssp             CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred             cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence            4567899999754      234 888888877653   45566788999999999983        34889999999999


Q ss_pred             HHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          114 DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       114 ~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      ..++.++ .++||+|+++.|+|+++...++..|.++..++++  .++.+|++++++.+++++++++   |+||||...+ 
T Consensus        67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~-  140 (374)
T 3uwc_A           67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD-  140 (374)
T ss_dssp             HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred             HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence            9999999 8999999999999999999999999999999886  4567899999999988777666   8999999854 


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~  269 (415)
                        +++|.++|+++|+++|+|++|+.+. +.+.   ....+.    .+++.|+|  |.++.+|. .|++++++       +
T Consensus       141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~---~~~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~  203 (374)
T 3uwc_A          141 --MPALAKIAKKHNLHIVEDACQTILGRINDK---FVGSWG----QFACFSLHPLKNLNVWSD-AGVIITHS-------D  203 (374)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS----SEEEEECSSSSSSCCSSC-CEEEEESC-------H
T ss_pred             --HHHHHHHHHHcCCEEEEeCCCccCceeCCe---eccccc----cEEEEeCCCCCcCCccce-eEEEEeCC-------H
Confidence              7888889999999999999998754 2221   111111    26777866  99765455 78888765       2


Q ss_pred             HHHHHHHhhccc-------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC-CcCCCCC
Q 014936          270 KVVERMKKYFDI-------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC-ISCPHKP  335 (415)
Q Consensus       270 ~~~~~~~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p  335 (415)
                      ++.+.++.....             +...+.....+....+     +.+++..++.+++.+.+.+.|+++++ +.....+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~  278 (374)
T 3uwc_A          204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLM-----NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRR  278 (374)
T ss_dssp             HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHG-----GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCC
T ss_pred             HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCC
Confidence            465655544210             1112333333332233     23567778888888999999998866 6633233


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC----------------C-------CCeEEEEee--CC
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG----------------L-------KNWLRVTFA--VD  390 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----------------~-------~~~iRi~~~--~~  390 (415)
                      .++...|..+....    .+..++...+ .++||.+.++....                .       .+.+|+++.  ++
T Consensus       279 ~~~~~~~~~~~~~~----~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t  353 (374)
T 3uwc_A          279 EGVYHVFHIYVLRV----KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLT  353 (374)
T ss_dssp             TTEECCCSSEEEEE----TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSC
T ss_pred             CCCceeeEEEEEEc----CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCC
Confidence            33322221111100    1355665555 56799998875110                0       167999984  68


Q ss_pred             hhhHHHHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSFYQR  407 (415)
Q Consensus       391 ~~~l~~~l~~l~~~~~~  407 (415)
                      +++++.+++.|++++++
T Consensus       354 ~edi~~~~~~l~~~l~~  370 (374)
T 3uwc_A          354 EEEINYIIKKVREFYLE  370 (374)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999998764

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.97  E-value=2.5e-29  Score=242.86  Aligned_cols=351  Identities=13%  Similarity=0.102  Sum_probs=237.3

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++||..|.....  ++ .+|.+++|+.+++..... .+. ..+..+.++++++++.+..+  ...+++++++|++
T Consensus        51 ~~G~~ylD~~s~~~~~~--lGh~~p~v~~A~~~~l~~~~~-~~~-~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGs  124 (476)
T 3i5t_A           51 EDGRRLIDGPAGMWCAQ--VGYGRREIVDAMAHQAMVLPY-ASP-WYMATSPAARLAEKIATLTP--GDLNRIFFTTGGS  124 (476)
T ss_dssp             TTCCEEEETTHHHHTCT--TCBCCHHHHHHHHHHHHHCCC-CCT-TTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHH
T ss_pred             CCCCEEEECCCchhhcc--CCCCCHHHHHHHHHHHHhccC-ccc-CccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchH
Confidence            35788999988842211  23 479999999998875321 122 14556788888888887654  3457999999999


Q ss_pred             HHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCCe-------------EEEeeccCC-CCCCCC------
Q 014936          111 QAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPD-KGWEVD------  162 (415)
Q Consensus       111 ~al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~-~~~~~~------  162 (415)
                      +|+..+++.+..        .++.|++.+|+|+++...+...+..             +..++.... ..+..+      
T Consensus       125 eA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  204 (476)
T 3i5t_A          125 TAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLD  204 (476)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHH
Confidence            999999999853        3579999999999887666544322             122221100 001122      


Q ss_pred             --hhHHHhhcC----CCceEEEecCCCCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc-ccCCC
Q 014936          163 --LDDIESLAD----QNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFGST  234 (415)
Q Consensus       163 --~~~l~~~~~----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~  234 (415)
                        +++|++.++    +++.++++..++|++|. +++.+.+++|.++|++||+++|+||+|.++...|... .+. .++..
T Consensus       205 ~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~  283 (476)
T 3i5t_A          205 DLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVV  283 (476)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCC
Confidence              678888775    23455555555778885 7899999999999999999999999999877666422 222 23322


Q ss_pred             CCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHH
Q 014936          235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      ++++   ++||+++ .| +|+|++++++        ++++.+...        ...+++.+++++.++.++|+...+   
T Consensus       284 pdi~---t~sK~l~-~G~~plg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---  348 (476)
T 3i5t_A          284 PDII---TFAKGVT-SGYVPLGGLAISE--------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---  348 (476)
T ss_dssp             CSEE---EECGGGG-TTSSCCEEEEECH--------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---
T ss_pred             cchh---hhhhhhc-CCCcCeEEEEECH--------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---
Confidence            3333   6789976 48 9999999965        677777642        123567899999999998864211   


Q ss_pred             HHHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCC------CHHHHHHHHHhhcCeEEEcCCC
Q 014936          306 KKTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDII------DDIDFCFKLAKEESVIILPGTA  376 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~------~~~~~~~~ll~~~gi~v~~g~~  376 (415)
                      +...++++++.+++.+.|+.+   |.+. . .+..|.++++.+.........      ....+...+ .++||.+.|.. 
T Consensus       349 ~~~~~~~~~~~~~l~~~L~~l~~~~~v~-~-v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-  424 (476)
T 3i5t_A          349 EGIVDQAREMADYFAAALASLRDLPGVA-E-TRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERC-FELGLIVRPLG-  424 (476)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTTTTSTTEE-E-EEEETTEEEEEECCC-----CCHHHHHHHHHHHHHH-HHTTEECEEET-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCeE-E-EEecCceeEEEEecCccccccccchhHHHHHHHHHH-HHCCCEEEecC-
Confidence            345666777777777777654   3333 2 344566777777532100000      033455555 45699998842 


Q ss_pred             CCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          377 VGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       377 ~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                          +++||++  ..+++++++++++|++++++..+++
T Consensus       425 ----~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~~  458 (476)
T 3i5t_A          425 ----DLCVISPPLIISRAQIDEMVAIMRQAITEVSAAH  458 (476)
T ss_dssp             ----TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence                7999995  6799999999999999999877654

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.97  E-value=2.4e-29  Score=242.62  Aligned_cols=352  Identities=15%  Similarity=0.137  Sum_probs=232.3

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++||..|.....  ++ .+|.+++|+.+++..... .|....+..+.+.++++.+.+..+  ...++|++++|++
T Consensus        52 ~~G~~ylD~~s~~~~~~--lGh~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGs  126 (472)
T 3hmu_A           52 SEGEEILDAMAGLWCVN--IGYGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGS  126 (472)
T ss_dssp             TTCCEEECTTHHHHTCT--TCBCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHH
T ss_pred             CCCCEEEECCCchhhcc--CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHH
Confidence            35778999988842111  22 479999999998875331 222222334555555555555433  4567999999999


Q ss_pred             HHHHHHHHHhcC--------CCCEEEEcCCCCcchHHHHHhCCC------------eEEEeeccC--C-CCCCCC-----
Q 014936          111 QAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI------------EVRHFDLLP--D-KGWEVD-----  162 (415)
Q Consensus       111 ~al~~~~~~l~~--------~gd~vi~~~p~y~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~~-----  162 (415)
                      ++++.+++.+..        +++.|++.+++|+++...+...+.            .+..++...  . +++ .+     
T Consensus       127 eA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~  205 (472)
T 3hmu_A          127 EANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFG  205 (472)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHH
Confidence            999999999874        468999999999987766554433            233343211  0 111 23     


Q ss_pred             ---hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936          163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (415)
Q Consensus       163 ---~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  234 (415)
                         +++|++.++   +...++++++| +|++|.+ .+.+.+++|.++|+++|+++|+||+|.++...|... ....++..
T Consensus       206 ~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~-a~~~~~v~  284 (472)
T 3hmu_A          206 LARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF-GTQTMGIR  284 (472)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc-hhHHhCCC
Confidence               677887775   23445566666 6677765 488999999999999999999999999877665422 22223333


Q ss_pred             CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDEVFFKKTLNL  311 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  311 (415)
                      .+++   +|||+++.+|+|+||+++++        ++++.+...   ...+++.+++++.++.++|+...+   +...++
T Consensus       285 pdi~---t~sK~l~gg~~plG~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~  350 (472)
T 3hmu_A          285 PHIM---TIAKGLSSGYAPIGGSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDH  350 (472)
T ss_dssp             CSEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHH
T ss_pred             Ccee---eechhhhcCCcceEEEEECH--------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHH
Confidence            3333   67899776669999999975        788887322   123567889999999988864211   234555


Q ss_pred             HH-HHHHHHHHHhhc---CCCCcCCCCCCCceEEEEecCccccC--CC-----CCHHHHHHHHHhhcCeEEEcCCCCCCC
Q 014936          312 LK-QSVDICYNKIKE---IPCISCPHKPEGSMAVMLKLNLSLLD--DI-----IDDIDFCFKLAKEESVIILPGTAVGLK  380 (415)
Q Consensus       312 ~~-~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~l~~~~~~--~~-----~~~~~~~~~ll~~~gi~v~~g~~~~~~  380 (415)
                      ++ ++.+++.+.|++   +|.+. . .+..|.++++.+......  ..     ....++...+ .++||.+.|+.     
T Consensus       351 ~~~~~~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----  422 (472)
T 3hmu_A          351 VRNVAAPYLKEKWEALTDHPLVG-E-AKIVGMMASIALTPNKASRAKFASEPGTIGYICRERC-FANNLIMRHVG-----  422 (472)
T ss_dssp             HHHTHHHHHHHHHHGGGGSTTEE-E-EEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHH-HHTTBCCEEET-----
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeE-E-EEecCceEEEEEecCccccccccchhHHHHHHHHHHH-HHCCcEEEecC-----
Confidence            55 566666666654   34343 2 344566777776431100  00     0034555555 46699999863     


Q ss_pred             CeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          381 NWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       381 ~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      +++||++  ..+++++++++++|++++++...++
T Consensus       423 ~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~~~~  456 (472)
T 3hmu_A          423 DRMIISPPLVITPAEIDEMFVRIRKSLDEAQAEI  456 (472)
T ss_dssp             TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            7999996  5799999999999999998876554

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.97  E-value=4.7e-29  Score=236.17  Aligned_cols=286  Identities=14%  Similarity=0.103  Sum_probs=205.1

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh----CCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~----~g~~~~~~~~  153 (415)
                      ...+|++.+++++        ..+++++++||++++..++.+++++||+|+++.|+|+++...+..    .|.++..++.
T Consensus        82 ~~~~l~~~la~~~--------g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~  153 (414)
T 3ndn_A           82 TVSVFEERLRLIE--------GAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG  153 (414)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHHHHH--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC
Confidence            4566777777766        246889999999999999999999999999999999998776644    8999998875


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                      +       |+++|++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|+...+.    .++ .++.
T Consensus       154 ~-------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g~  218 (414)
T 3ndn_A          154 D-------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PLGV  218 (414)
T ss_dssp             T-------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GGTC
T ss_pred             C-------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hcCC
Confidence            2       799999999999999999999999999955   778899999999999999999853321    111 2222


Q ss_pred             CCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHH-HHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936          234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVE-RMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLN  310 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  310 (415)
                         .+++.|+||.++.+| +++|++++++        +.+. .++.. .......++....++...++.     +..+.+
T Consensus       219 ---div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~  282 (414)
T 3ndn_A          219 ---DVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET-----LAIRVQ  282 (414)
T ss_dssp             ---SEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred             ---CeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-----HHHHHH
Confidence               388899999998888 8999999865        3333 44433 223344566655555555543     566777


Q ss_pred             HHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcC
Q 014936          311 LLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG  374 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g  374 (415)
                      +..++++.+.+.|++.|++..+.+|.                .|.++++.++............++.. ++..++.+++|
T Consensus       283 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~s~G  361 (414)
T 3ndn_A          283 HSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDK-MRLIDISNNLG  361 (414)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHH-CSSSEECSCCS
T ss_pred             HHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHh-CccceEcCCCC
Confidence            88888899999998887765343443                47788888853100000113344444 35567777777


Q ss_pred             CCCC-----------------------CCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          375 TAVG-----------------------LKNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       375 ~~~~-----------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                      ..+.                       .+++||+|++.  |+.+.+++.|.+++
T Consensus       362 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al  413 (414)
T 3ndn_A          362 DAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL  413 (414)
T ss_dssp             CSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred             CCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence            6532                       15789999985  45556666666554

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.97  E-value=2e-29  Score=240.37  Aligned_cols=337  Identities=14%  Similarity=0.078  Sum_probs=221.0

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      ...++|..+.      .+.++.+++++.+.+.......|+      ......++++.+.+++.+.+|  +++++|++++|
T Consensus        25 ~~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG   96 (417)
T 3n0l_A           25 CEGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG   96 (417)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH
T ss_pred             hcCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH
Confidence            3467776654      334789999998877432212222      222334555533333333333  45667877777


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHHhCC--CeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCC
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRH--IEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINP  182 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p  182 (415)
                       ++++.+++.++.++||+|+++.|+|+++..   .....|  ..+..++++  .++.+|+++|+++++ +++++|++++|
T Consensus        97 -t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~  173 (417)
T 3n0l_A           97 -SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGAS  173 (417)
T ss_dssp             -HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCS
T ss_pred             -HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCc
Confidence             799999999999999999999999987654   223333  444555543  556799999999987 57889988888


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-ccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      +|  |..++   +++|.++|+++|+++|+||+|... .+.+.....+.     ...+++.|+||++  +|+|+||+++++
T Consensus       174 ~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~  241 (417)
T 3n0l_A          174 AY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND  241 (417)
T ss_dssp             SC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC
T ss_pred             cc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC
Confidence            86  77766   788999999999999999997533 33333222222     1238889999985  788899999863


Q ss_pred             CCCCCChHHHHHHHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          262 PCGMFRKPKVVERMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                             +++.+.+......  ..+++...+.++..++.......+++..++++++++++.+.|++. ++.....+..++
T Consensus       242 -------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~  313 (417)
T 3n0l_A          242 -------EELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNH  313 (417)
T ss_dssp             -------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSS
T ss_pred             -------HHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCce
Confidence                   2577777665332  234445555555545443223567888899999999999999884 776332235567


Q ss_pred             EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC------CCeEEEEee------CChhhHHHHHHHHHHHHHH
Q 014936          340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL------KNWLRVTFA------VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~iRi~~~------~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++|+.++...    .+.. .+..+|.++||.+.++..+..      .+.+|+++.      .+++++++++++|++++++
T Consensus       314 ~~~~~~~~~~----~~~~-~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~  388 (417)
T 3n0l_A          314 LVLMSFLDRE----FSGK-DADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD  388 (417)
T ss_dssp             EEEEECTTSS----SCHH-HHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcccCC----CCHH-HHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence            8888775321    1344 445566788999987654322      367999983      4679999999999998864

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.97  E-value=2.4e-29  Score=242.35  Aligned_cols=335  Identities=15%  Similarity=0.075  Sum_probs=218.6

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .++.++||+.|.+....++ .+|.+++++.+.+....  .|+   +..++++++++++.+..+   .++++++++|++++
T Consensus        55 ~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA  125 (453)
T 2cy8_A           55 DGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTET  125 (453)
T ss_dssp             TCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHH
T ss_pred             CCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHH
Confidence            3667899988864322223 68999999999987643  222   346899999999988765   57899999999999


Q ss_pred             HHHHHHH---hcCCCCEEEEcCCCCcchHHHHHh-----------CCCe------EEEeeccCCCCCCCChhHHHhhcCC
Q 014936          113 IDVAMAL---LSRPGANILLPRPGFPIYELSAAF-----------RHIE------VRHFDLLPDKGWEVDLDDIESLADQ  172 (415)
Q Consensus       113 l~~~~~~---l~~~gd~vi~~~p~y~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~~~~~l~~~~~~  172 (415)
                      +..++++   +.++ +.|++.+|+|+++...+..           .|..      +..++.       .|+++|++.+++
T Consensus       126 ~~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~  197 (453)
T 2cy8_A          126 TLLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFAN  197 (453)
T ss_dssp             HHHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHh
Confidence            9999998   6654 6888889999876553321           1221      222221       388999988863


Q ss_pred             --CceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC
Q 014936          173 --NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI  248 (415)
Q Consensus       173 --~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~  248 (415)
                        ...++++++| +|+||.+ .+.+.+++|.++|++||+++|+||+|.++ ..+. ...+..++...+   +.|+||+++
T Consensus       198 ~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~d---i~s~sK~l~  272 (453)
T 2cy8_A          198 HGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLDVQPD---LTCLAKASA  272 (453)
T ss_dssp             HGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHTCCCS---EEEEEGGGG
T ss_pred             cCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhCCCCc---EEEEChhhh
Confidence              2334566666 4779976 57999999999999999999999999976 4432 111222222222   238999987


Q ss_pred             CCCceEEEEEeeCCCCCCChHHHHHHHHh---h---ccccCCchhHHHHHHHHhhCC-CcHHHHHHHHHHHHHHHHHHHH
Q 014936          249 VPGWRLGWFVTTDPCGMFRKPKVVERMKK---Y---FDILGDPATFIQAAVPSILQQ-PDEVFFKKTLNLLKQSVDICYN  321 (415)
Q Consensus       249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~  321 (415)
                      . |+|+||+++++        ++++.+..   .   ...+++.+++++.++.++|+. .    .++..++++++++++.+
T Consensus       273 ~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~----~~~~~~~~~~~~~~l~~  339 (453)
T 2cy8_A          273 G-GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL----EDDVCAKINDLGQFARE  339 (453)
T ss_dssp             T-TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH----HTTHHHHHHHHHHHHHH
T ss_pred             C-CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHH
Confidence            4 89999999865        56665544   1   122456788888888888753 2    13455666777777777


Q ss_pred             HhhcCC---CCcCCCCCCCceEEEEecCc-----c----ccC-----CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936          322 KIKEIP---CISCPHKPEGSMAVMLKLNL-----S----LLD-----DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR  384 (415)
Q Consensus       322 ~l~~~~---~~~~~~~p~~g~~~~~~l~~-----~----~~~-----~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR  384 (415)
                      .|+++.   ++... .+..|.++|+.++.     .    ...     +.....++...++ ++||.+.|+      +.+|
T Consensus       340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~  411 (453)
T 2cy8_A          340 AMNHLFARKGLNWL-AYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVF  411 (453)
T ss_dssp             HHHHHHHHTTCCEE-EECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEE
T ss_pred             HHHHHHhhCCCcEE-EEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEE
Confidence            766431   22212 35567788988863     1    000     0001345666665 569999653      3478


Q ss_pred             EEeeCChhhHHHHHHHHHHHHHHHHH
Q 014936          385 VTFAVDPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       385 i~~~~~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      +++..+++++++++++|+++++++.+
T Consensus       412 l~~~~t~~~i~~~l~~l~~~l~~~~~  437 (453)
T 2cy8_A          412 LSAQHEREHVEHLVTTFDRVLDRLAD  437 (453)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeccCCHHHHHHHHHHHHHHHHHHHh
Confidence            77778999999999999999887643

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.97  E-value=3.2e-28  Score=230.39  Aligned_cols=280  Identities=17%  Similarity=0.177  Sum_probs=201.4

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~  152 (415)
                      ....++++.++++++      .  ++.+++++|++++..++.++.++||+|+++.|+|+++...+    ...|.++..++
T Consensus        65 ~~~~~l~~~la~~~g------~--~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~  136 (398)
T 1gc0_A           65 PTLNLLEARMASLEG------G--EAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD  136 (398)
T ss_dssp             HHHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence            467889999999883      2  35666667789999999999999999999999999887765    66788888886


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      .       .|++++++.+++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|..+.+..    ++ ..+
T Consensus       137 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~~~  201 (398)
T 1gc0_A          137 M-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-ELG  201 (398)
T ss_dssp             T-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-GGT
T ss_pred             C-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hhC
Confidence            5       2799999999989999999999999999975   8888999999999999999998765431    12 122


Q ss_pred             CCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHH-HHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVE-RMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKT  308 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~  308 (415)
                         ..+++.|+||.++.+|.|+ ||+++++        +.++ .++....  .+++.++..+.++...++.     +..+
T Consensus       202 ---~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~  265 (398)
T 1gc0_A          202 ---ADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LNLR  265 (398)
T ss_dssp             ---CSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred             ---ceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-----HHHH
Confidence               3488899999999999998 9988864        3443 4544432  2456788888887777764     4555


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCcCCC-------------CC---CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936          309 LNLLKQSVDICYNKIKEIPCISCPH-------------KP---EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL  372 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~~~~~~~~-------------~p---~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~  372 (415)
                      .++..++++.+.+.|++++.+..+.             .+   ..+.++.+.++.        ..+....++.+.++.+.
T Consensus       266 ~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~l~~~~i~~~  337 (398)
T 1gc0_A          266 MDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--------GIGAGRRFMNALQLFSR  337 (398)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--------HHHHHHHHHHHCSSSEE
T ss_pred             HHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--------CHHHHHHHHHhCCCcee
Confidence            6666777777777777654322111             11   235566666642        33445666777788776


Q ss_pred             c---CCC------C----------------CC-CCeEEEEeeC--ChhhHHHHHHHHHH
Q 014936          373 P---GTA------V----------------GL-KNWLRVTFAV--DPYSLEECLDRIKS  403 (415)
Q Consensus       373 ~---g~~------~----------------~~-~~~iRi~~~~--~~~~l~~~l~~l~~  403 (415)
                      .   |+.      +                +. ++.||+|++.  ++++++.+.+.|++
T Consensus       338 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~  396 (398)
T 1gc0_A          338 AVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA  396 (398)
T ss_dssp             CSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence            5   422      0                11 4799999974  34555655555544

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.97  E-value=4.9e-29  Score=241.05  Aligned_cols=332  Identities=15%  Similarity=0.106  Sum_probs=237.4

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      ..+.|+ +...     ...|.+.+++.+.+.  .++.|.+   ..|..++++++++++.+..|..   ..+++++|++++
T Consensus        67 ~~~~lg-~~~~-----~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~---~~~~~~~ggt~a  135 (474)
T 1wyu_B           67 TFYPLG-SCTM-----KYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMD---AITLEPAAGAHG  135 (474)
T ss_dssp             SCCCBT-TTCC-----CCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCS---EEECCCSSHHHH
T ss_pred             Cccccc-cccc-----cCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCC---ceeecChHHHHH
Confidence            456777 4311     223556666665422  2334443   4566788888888887766643   246788999999


Q ss_pred             HHHHHHHh----cCCCC-----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCC
Q 014936          113 IDVAMALL----SRPGA-----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG  183 (415)
Q Consensus       113 l~~~~~~l----~~~gd-----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~  183 (415)
                      +..++.++    .++||     +|+++.|+|+.+...++..|++++.++.+.  ++.+|+++|++++++++++|++++| 
T Consensus       136 ~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i~~~t~~v~~~~p-  212 (474)
T 1wyu_B          136 ELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKRELGPHVAALMLTNP-  212 (474)
T ss_dssp             HHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHCSTTEEEEEECSS-
T ss_pred             HHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhhCCCceEEEEECC-
Confidence            99866554    35787     999999999999999999999999998753  4678999999999888999999998 


Q ss_pred             CccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCC-C---ceEEEEEe
Q 014936          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-G---WRLGWFVT  259 (415)
Q Consensus       184 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G---~r~G~~~~  259 (415)
                      ||+|.+.  +++++|+++|+++|+++|+|++|..+.++.   .....++   ..+++.|+||+|+.+ |   +|+||+++
T Consensus       213 n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~---~~~~~~g---~di~~~s~~K~~~~p~g~gG~~~G~~~~  284 (474)
T 1wyu_B          213 NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGW---ARPGDMG---FDVVHLNLHKTFTVPHGGGGPGSGPVGV  284 (474)
T ss_dssp             CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT---CCHHHHT---CSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred             CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC---CCcccCC---CcEEEEeCccccccCCCCCCCCeEEEEE
Confidence            5899872  478999999999999999999998765421   1222233   238888999998766 4   59999999


Q ss_pred             eCCCCCCChHHHHHHHHh-h-------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936          260 TDPCGMFRKPKVVERMKK-Y-------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  319 (415)
                      ++        ++++.+.. .                   .....+.+...+.++..++.....+++++..+++.++++++
T Consensus       285 ~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l  356 (474)
T 1wyu_B          285 KA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYL  356 (474)
T ss_dssp             CG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            76        33333321 0                   00112356677777777776434567888899999999999


Q ss_pred             HHHhhcCCCCcCCCCCCCceE--EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--CCCeEEEEeeC--Chhh
Q 014936          320 YNKIKEIPCISCPHKPEGSMA--VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--LKNWLRVTFAV--DPYS  393 (415)
Q Consensus       320 ~~~l~~~~~~~~~~~p~~g~~--~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~iRi~~~~--~~~~  393 (415)
                      .+.|+++ ++.+. .+. +.+  +|+.++.    + .+..++...+++ +||.+ |+..|.  ..+++||+++.  ++++
T Consensus       357 ~~~L~~~-g~~~~-~~~-~~~~~~~~~~~~----~-~~~~~l~~~L~~-~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~  426 (474)
T 1wyu_B          357 KELLKEK-GYRVP-YDG-PSMHEFVAQPPE----G-FRALDLAKGLLE-LGFHP-PTVYFPLIVKEALMVEPTETEAKET  426 (474)
T ss_dssp             HHHHHHT-TCBCS-SCS-SCCSCEEEBCST----T-CCHHHHHHHHHH-TTCCC-CEESCSTTSTTCEEECCCTTSCHHH
T ss_pred             HHHHhhc-CcEec-CCC-CcceEEEEEcCC----C-CCHHHHHHHHHH-CCccc-cccccccccCCEEEEEeecCCCHHH
Confidence            9999987 77732 232 222  5656521    1 256777777754 59985 555553  36899999964  8999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQR  407 (415)
Q Consensus       394 l~~~l~~l~~~~~~  407 (415)
                      +++++++|++++++
T Consensus       427 id~~~~~L~~~~~~  440 (474)
T 1wyu_B          427 LEAFAEAMGALLKK  440 (474)
T ss_dssp             HHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988754

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.97  E-value=1.5e-29  Score=242.40  Aligned_cols=336  Identities=15%  Similarity=0.097  Sum_probs=224.1

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +++.++||+.|.+....++ .+|.+.+++.+.+.......|+. ....++++.+++++    +   ..+++++++|++++
T Consensus        54 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~---~~~~v~~~~sgseA  124 (434)
T 2epj_A           54 DGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGAPG-EAEVLLAEKILGYV----K---RGGMIRFVNSGTEA  124 (434)
T ss_dssp             TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSCC-HHHHHHHHHHHHHH----C---TTCEEEEESSHHHH
T ss_pred             CCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHhC----C---CCCEEEEeCCHHHH
Confidence            4677899998864322222 68999999999987643333432 22345555555554    2   47899999999999


Q ss_pred             HHHHHHH---hcCCCCEEEEcCCCCcchHHHHH--------------hCCC------eEEEeeccCCCCCCCChhHHHhh
Q 014936          113 IDVAMAL---LSRPGANILLPRPGFPIYELSAA--------------FRHI------EVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus       113 l~~~~~~---l~~~gd~vi~~~p~y~~~~~~~~--------------~~g~------~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      +..++++   +.+ ++.|++.+|+|+++...+.              ..|+      ++..++.       .|++.|++.
T Consensus       125 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~  196 (434)
T 2epj_A          125 TMTAIRLARGYTG-RDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV  196 (434)
T ss_dssp             HHHHHHHHHHHHC-CCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred             HHHHHHHHHHhhC-CCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence            9999987   444 5788888999987554321              1132      2333332       378999988


Q ss_pred             cCC--CceEEEecCC-CCccccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          170 ADQ--NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       170 ~~~--~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                      +++  ...++++++| +|+||.++ +.+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+   +.|+||
T Consensus       197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK  271 (434)
T 2epj_A          197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGD---IIVLGK  271 (434)
T ss_dssp             HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCS---EEEEEG
T ss_pred             HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCC---eeeecc
Confidence            863  2345566667 56799876 7999999999999999999999999976 33321 11222222222   348899


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN  321 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  321 (415)
                      .++. |+|+||+++++        ++++.+...    ...+++.+++++.++.++|+...+   ++..++++++++++.+
T Consensus       272 ~l~~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~  339 (434)
T 2epj_A          272 IIGG-GFPVGAVAGSR--------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEE  339 (434)
T ss_dssp             GGGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHH
T ss_pred             hhcC-CcceeeeeecH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence            9876 89999999865        566655541    122456788888888888764211   3456777777777777


Q ss_pred             HhhcCC---CCcCCCCCCCceEEEEecCccccCC--------CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCC
Q 014936          322 KIKEIP---CISCPHKPEGSMAVMLKLNLSLLDD--------IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVD  390 (415)
Q Consensus       322 ~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~--------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~  390 (415)
                      .|+++.   ++... .+..|.++|+.++.....+        .....++...++ ++||.+.|+..    .++|+++..+
T Consensus       340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t  413 (434)
T 2epj_A          340 AASEVLDRTGLPYT-INRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSNL----EAVFTGLPHQ  413 (434)
T ss_dssp             HHHHHHHHHTCCEE-EEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTTCS
T ss_pred             HHHHHHhhCCCcEE-EEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccCC----CcEEEeccCC
Confidence            776541   23211 3456778898886411000        001345666654 67999998753    4577777789


Q ss_pred             hhhHHHHHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       391 ~~~l~~~l~~l~~~~~~~  408 (415)
                      ++++++++++|+++++++
T Consensus       414 ~e~i~~~l~~l~~~l~~~  431 (434)
T 2epj_A          414 GEALEIAVEGLRSSLKTV  431 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999998765

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.97  E-value=5.8e-29  Score=237.60  Aligned_cols=332  Identities=14%  Similarity=0.071  Sum_probs=223.3

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      +++.++||..|.+....++ .+|.+++++.+.+.......|+     .++++.+++++.+..+   .++++++++|++++
T Consensus        50 ~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~-----~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea  120 (424)
T 2e7u_A           50 DGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGLTFGAP-----SPLEVALAKKVKRAYP---FVDLVRFVNSGTEA  120 (424)
T ss_dssp             TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSC-----CHHHHHHHHHHHHHCT---TCCEEEEESSHHHH
T ss_pred             CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            4677899998864322223 6899999999998764322332     3455566666655443   57899999999999


Q ss_pred             HHHHHHH---hcCCCCEEEEcCCCCcchHHHHHh--------------CCC------eEEEeeccCCCCCCCChhHHHhh
Q 014936          113 IDVAMAL---LSRPGANILLPRPGFPIYELSAAF--------------RHI------EVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus       113 l~~~~~~---l~~~gd~vi~~~p~y~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      +..+++.   +.+ ++.|++.+|+|+++...+..              .|.      ++..++.       .|++.|++.
T Consensus       121 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~  192 (424)
T 2e7u_A          121 TMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV  192 (424)
T ss_dssp             HHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred             HHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence            9999986   554 47899999999986553321              121      2333332       378999988


Q ss_pred             cCC--CceEEEecCCCCc-cccCC-CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          170 ADQ--NTVALVIINPGNP-CGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       170 ~~~--~~~~v~i~~p~np-tG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                      ++.  ...++++++|+|+ ||.++ +.+.+++|.++ ++||+++|+||+|.++ ..+.. .....++...++   .|+||
T Consensus       193 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK  266 (424)
T 2e7u_A          193 LKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDL---VTLGK  266 (424)
T ss_dssp             HHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSE---EEECG
T ss_pred             HHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcch---hhhhh
Confidence            863  3456777788664 89765 79999999999 9999999999999976 33321 112222222222   38999


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN  321 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  321 (415)
                      +++ +|+|+||+++++        ++++.+...    ...+++.+++++.++.++|+... + .++..++++++++++.+
T Consensus       267 ~l~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~-~~~~~~~~~~~~~~l~~  335 (424)
T 2e7u_A          267 ILG-GGLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLE-E-NPGYYAYLEDLGARLEA  335 (424)
T ss_dssp             GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHH-H-CTHHHHHHHHHHHHHHH
T ss_pred             hhh-CCcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHH-h-ccHHHHHHHHHHHHHHH
Confidence            987 499999999865        566666541    12245678888888888886421 1 14566777777788777


Q ss_pred             HhhcC---CCCcCCCCCCCceEEEEecCccccCC--------CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCC
Q 014936          322 KIKEI---PCISCPHKPEGSMAVMLKLNLSLLDD--------IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVD  390 (415)
Q Consensus       322 ~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~--------~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~  390 (415)
                      .|+++   .++. ...+..|.++|+.++.....+        .....++...++ ++||.+.|+..    ..+|+++..+
T Consensus       336 ~L~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t  409 (424)
T 2e7u_A          336 GLKEVLKEKGLP-HTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNF----EAAFLSVAHR  409 (424)
T ss_dssp             HHHHHHHHTTCC-CEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSS----SCEECCTTCC
T ss_pred             HHHHHHHhCCCc-eEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCC----CceEeeccCC
Confidence            77653   1332 113456778999886311000        001345666665 67999998753    4578877789


Q ss_pred             hhhHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSF  404 (415)
Q Consensus       391 ~~~l~~~l~~l~~~  404 (415)
                      ++++++++++|+++
T Consensus       410 ~~~i~~~l~~l~~~  423 (424)
T 2e7u_A          410 EEDVEKTLEALRKA  423 (424)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999875

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.97  E-value=5.9e-28  Score=226.88  Aligned_cols=314  Identities=14%  Similarity=0.076  Sum_probs=225.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANI  127 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l---~~~gd~v  127 (415)
                      .++++.+++++.+.+....   |.+.....++|+.++++++      .  +++++++|+++++..++.++   .++||+|
T Consensus         9 ~~~~~~v~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~V   77 (375)
T 2fnu_A            9 PCLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFSADRNEI   77 (375)
T ss_dssp             CCCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEE
T ss_pred             CCCCHHHHHHHHHHHHcCc---ccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEE
Confidence            3457899999999887532   2333467899999999983      2  39999999999999999999   8899999


Q ss_pred             EEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCc
Q 014936          128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT  207 (415)
Q Consensus       128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~  207 (415)
                      +++.|+|+++...+...|++++.++++++.  .+|++++++.++++++++++++|   ||.+.+   +++|.++|+++|+
T Consensus        78 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~  149 (375)
T 2fnu_A           78 ITTPISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSL  149 (375)
T ss_dssp             EECSSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTC
T ss_pred             EECCCccHhHHHHHHHCCCEEEEeccCCCC--CCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCC
Confidence            999999999999999999999999886532  68999999999888888888876   999865   6788888999999


Q ss_pred             EEEEccccCCcccCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc---
Q 014936          208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL---  282 (415)
Q Consensus       208 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---  282 (415)
                      ++|+|++|+.+.....  ..+..++    .+.+.|+|  |.++. |  +|++++.+      ++++.+.++......   
T Consensus       150 ~li~D~a~~~~~~~~~--~~~~~~~----~i~~~s~s~~K~~~~-g--~g~~~~~~------~~~~~~~~~~~~~~~~~~  214 (375)
T 2fnu_A          150 SFLSDSSHALGSEYQN--KKVGGFA----LASVFSFHAIKPITT-A--EGGAVVTN------DSELHEKMKLFRSHGMLK  214 (375)
T ss_dssp             EEEEECTTCTTCEETT--EETTSSS----SEEEEECCTTSSSCC-S--SCEEEEES------CHHHHHHHHHHTBTTEEE
T ss_pred             EEEEECccccCCeECC--eeccccC----CeEEEeCCCCCCccc-c--CceEEEeC------CHHHHHHHHHHHhcCCcc
Confidence            9999999987543211  1122221    26777888  99755 6  78888742      125666665542111   


Q ss_pred             --------------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-----CCceEEEE
Q 014936          283 --------------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-----EGSMAVML  343 (415)
Q Consensus       283 --------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----~~g~~~~~  343 (415)
                                    ...+++...+....+     +++++..++.+++++++.+.|+++|++... .+     ..++++|+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~  288 (375)
T 2fnu_A          215 KDFFEGEVKSIGHNFRLNEIQSALGLSQL-----KKAPFLMQKREEAALTYDRIFKDNPYFTPL-HPLLKDKSSNHLYPI  288 (375)
T ss_dssp             SSSSCEEESSCCCBCCCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTCSSEEES-GGGCSSCCCCSCEEE
T ss_pred             ccccccccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCCCCcceEEEEE
Confidence                          123333333322223     346778888999999999999998887733 33     12345577


Q ss_pred             ecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC-------CC-------C-------CCeEEEEee--CChhhHHHHHHH
Q 014936          344 KLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA-------VG-------L-------KNWLRVTFA--VDPYSLEECLDR  400 (415)
Q Consensus       344 ~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-------~~-------~-------~~~iRi~~~--~~~~~l~~~l~~  400 (415)
                      .++...   ..+..++...| .++||.+..+..       |+       .       .+++||+++  .++++++.+++.
T Consensus       289 ~~~~~~---~~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~  364 (375)
T 2fnu_A          289 LMHQKF---FTCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHS  364 (375)
T ss_dssp             EECGGG---GGGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHH
T ss_pred             EeCccc---cchHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHH
Confidence            675310   00345566665 567999883211       11       1       267999996  589999999999


Q ss_pred             HHHHHHHH
Q 014936          401 IKSFYQRH  408 (415)
Q Consensus       401 l~~~~~~~  408 (415)
                      |+++++++
T Consensus       365 l~~~~~~~  372 (375)
T 2fnu_A          365 VLKTFESF  372 (375)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99988754

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.97  E-value=6.2e-28  Score=232.25  Aligned_cols=337  Identities=14%  Similarity=0.007  Sum_probs=235.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC---CcEEEeCChHHHHHHHHHHhcC------
Q 014936           52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP---NDVFVTSGCTQAIDVAMALLSR------  122 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~i~~g~~~al~~~~~~l~~------  122 (415)
                      +.++.+.+++.+++.... ..|....+..++++.+.+++.+.+|.+.+.   ..+++|+|+++++.+++.++.+      
T Consensus        53 ~~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~  131 (452)
T 2dgk_A           53 WDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM  131 (452)
T ss_dssp             CCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence            456889999988876532 345555577888999988888887754332   2489999999999999988753      


Q ss_pred             --CC-----CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHH
Q 014936          123 --PG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (415)
Q Consensus       123 --~g-----d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l  195 (415)
                        +|     ++|+++. +|..+...++..|++++.+++++ +++.+|+++|++++++++++|++++|+||||.+   +++
T Consensus       132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l  206 (452)
T 2dgk_A          132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY---EFP  206 (452)
T ss_dssp             HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBB---CCH
T ss_pred             HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCccc---CCH
Confidence              45     5999999 99999999999999999998864 357899999999999899999999999999999   567


Q ss_pred             HHHHHHHhhc------CcEEEEccccCCccc---CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936          196 QKLAETANKL------KTLVIADEVYGHLVF---GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF  266 (415)
Q Consensus       196 ~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  266 (415)
                      ++|+++|+++      |+++++|++|+.+..   .+.....+   ....-..+..+++|. +++|+++||++++++..+ 
T Consensus       207 ~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~hK~-~~~~~~~G~~~~~~~~~~-  281 (452)
T 2dgk_A          207 QPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF---RLPRVKSISASGHKF-GLAPLGCGWVIWRDEEAL-  281 (452)
T ss_dssp             HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---TSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGS-
T ss_pred             HHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc---CCCCCcEEEECcccc-cCCCCCeEEEEEcCHHHH-
Confidence            7888888885      999999999998653   22111111   111112566788995 788999999999753211 


Q ss_pred             ChHHHHHHHHhhc-c---------ccC---CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936          267 RKPKVVERMKKYF-D---------ILG---DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH  333 (415)
Q Consensus       267 ~~~~~~~~~~~~~-~---------~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  333 (415)
                           .+.+.... .         ..+   ......+.++...+.   .+.+++..++..++++++.+.|+++++++++ 
T Consensus       282 -----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-  352 (452)
T 2dgk_A          282 -----PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG---REGYTKVQNASYQVAAYLADEIAKLGPYEFI-  352 (452)
T ss_dssp             -----CGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-
T ss_pred             -----HHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-
Confidence                 11111100 0         001   113444555554443   3668888999999999999999999778743 


Q ss_pred             CC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC---CCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          334 KP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA---VGLKNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       334 ~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~---~~~~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      .|    ....++.++++...... .+..++...| .+.||.+.....   ....+++|++++  .++++++.+++.|+++
T Consensus       353 ~~~~~~~~~~~v~f~~~~~~~~~-~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~  430 (452)
T 2dgk_A          353 CTGRPDEGIPAVCFKLKDGEDPG-YTLYDLSERL-RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKAS  430 (452)
T ss_dssp             EECCTTTBSSEEEEEECTTCCCS-CCHHHHHHHH-HHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCeEEEEEEecCccccc-CCHHHHHHHH-HhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            33    34456666665310000 1235666666 456986432211   112458999995  5689999999999998


Q ss_pred             HHHHHH
Q 014936          405 YQRHAK  410 (415)
Q Consensus       405 ~~~~~~  410 (415)
                      ++.+.+
T Consensus       431 ~~~~~~  436 (452)
T 2dgk_A          431 LKYLSD  436 (452)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            877654

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.96  E-value=4.2e-29  Score=238.84  Aligned_cols=334  Identities=13%  Similarity=0.053  Sum_probs=215.9

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      +++.++||+.|.+...  ++ .+|.+++++.+.+.......| +    .++++++++++.+..+   .++++++++|+++
T Consensus        50 ~g~~~lD~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~~~~~-~----~~~~~~la~~l~~~~~---~~~~v~~~~ggse  119 (427)
T 3fq8_A           50 DGNRYIDYVGTWGPAI--CGHAHPEVIEALKVAMEKGTSFGA-P----CALENVLAEMVNDAVP---SIEMVRFVNSGTE  119 (427)
T ss_dssp             TSCEEEESSGGGTTCT--TCBTCHHHHHHHHHHHTTCSCCSS-C----CHHHHHHHHHHHHHST---TCSEEEEESSHHH
T ss_pred             CCCEEEECCCchhhhc--cCCCCHHHHHHHHHHHHhCCCcCC-C----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHH
Confidence            4778999999864322  33 589999999999876443333 2    3556666666665554   5789999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-CCe-------------------EEEeeccCCCCCCCChhHHHhh
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HIE-------------------VRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g~~-------------------~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      +++.+++...  ..++.|++..|+|+++...+... +..                   +..++.       -|+++|+++
T Consensus       120 a~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~  192 (427)
T 3fq8_A          120 ACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKAL  192 (427)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHHH
Confidence            9999995432  23478999999998755433222 111                   222221       178999988


Q ss_pred             cCC---CceEEEecCCCCccccCCC-HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          170 ADQ---NTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       170 ~~~---~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                      +++   +++++++..++|++|.+.+ .+.+++|.++|++||+++|+||+|.++ ..+.. ......+...+   +.|+||
T Consensus       193 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK  267 (427)
T 3fq8_A          193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPD---LTTLGK  267 (427)
T ss_dssp             HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCS---EEEECG
T ss_pred             HHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCC---hhhhhh
Confidence            865   4444445444667787654 666999999999999999999999987 44432 11122222212   358899


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN  321 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  321 (415)
                      +++ +|+|+||+++++        ++++.+...    ...+++.+++++.++.++|+...+   +...++++++++.+.+
T Consensus       268 ~~~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~  335 (427)
T 3fq8_A          268 IIG-GGLPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSD  335 (427)
T ss_dssp             GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHH
T ss_pred             hhh-CCcceEEEEEcH--------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence            987 799999998864        576666542    122356688899888888753211   2233444444444444


Q ss_pred             Hhh----cCCCCcCCCCCCCceEEEEecCccccC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeC
Q 014936          322 KIK----EIPCISCPHKPEGSMAVMLKLNLSLLD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAV  389 (415)
Q Consensus       322 ~l~----~~~~~~~~~~p~~g~~~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~  389 (415)
                      .|+    .+ ++. ...+..|+++|+.+......        +.....++...+ .++||.+.|+..    ..+|+++..
T Consensus       336 ~l~~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gi~v~~~~~----~r~~~~~~~  408 (427)
T 3fq8_A          336 GLLAIAQET-GHA-ACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF----EAGFTSLAH  408 (427)
T ss_dssp             HHHHHHHHT-TCC-CEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTC
T ss_pred             HHHHHHHhC-CCC-eEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHH-HHCCcEEecCCC----CCEEeeCcC
Confidence            444    33 222 11345677888887542110        000123555555 567999998763    356666678


Q ss_pred             ChhhHHHHHHHHHHHHHH
Q 014936          390 DPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       390 ~~~~l~~~l~~l~~~~~~  407 (415)
                      +++++++++++|++++++
T Consensus       409 t~e~i~~~l~~l~~~l~~  426 (427)
T 3fq8_A          409 TEEDIDATLAAARTVMSA  426 (427)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            999999999999998864

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.96  E-value=8.9e-29  Score=239.43  Aligned_cols=346  Identities=14%  Similarity=0.061  Sum_probs=234.8

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEe
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVT  106 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~i~  106 (415)
                      .+.|+|..+.      .++++.+++++.+.+.+....+|      +...+..++++.+.+++++.+|...+.  .+|+++
T Consensus        44 ~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~  117 (483)
T 1rv3_A           44 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY  117 (483)
T ss_dssp             HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             hcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence            4578997665      34679999999888764321122      222345678877777777777744221  247777


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH--------HHhCC--CeEEEeeccCCCCCCCChhHHHhhcC-CCce
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELS--------AAFRH--IEVRHFDLLPDKGWEVDLDDIESLAD-QNTV  175 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~--------~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~  175 (415)
                      +|+ +++.+++.++++|||+|++++++|.++...        +...|  ..++.+++++ .++.+|+++|+++++ ++++
T Consensus       118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk  195 (483)
T 1rv3_A          118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK  195 (483)
T ss_dssp             SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred             CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence            777 888888999999999999999999876532        22333  3444444443 357799999999997 7889


Q ss_pred             EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-ccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      +|++ +++|++ .+++   +++|.++|+++|+++|+|++|... ...+....++.  .   ..+++.|+||++  .|+|.
T Consensus       196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~---~div~~s~~K~l--~Gprg  263 (483)
T 1rv3_A          196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H---CHVVTTTTHKTL--RGCRA  263 (483)
T ss_dssp             EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T---CSEEEEESSGGG--CCCSC
T ss_pred             EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C---CcEEEecCcccC--CCCCc
Confidence            9888 899988 7655   788888999999999999998743 23333222322  1   127889999985  68888


Q ss_pred             EEEEeeCCCCCCC-------hHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936          255 GWFVTTDPCGMFR-------KPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       255 G~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                      ||+++++......       ..++.+.+....  ...++++.....++..+++.....++++..+++.++++.+.+.|++
T Consensus       264 G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~  343 (483)
T 1rv3_A          264 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE  343 (483)
T ss_dssp             EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence            9999986421000       001333343321  1123445555555555554322356788899999999999999998


Q ss_pred             CCCCcCCCCCC-CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCCCCC-CCCeEEEEee--CC----hhh
Q 014936          326 IPCISCPHKPE-GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGTAVG-LKNWLRVTFA--VD----PYS  393 (415)
Q Consensus       326 ~~~~~~~~~p~-~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~-~~~~iRi~~~--~~----~~~  393 (415)
                      + ++.++ .+. ...++|+.+...   +. +..++ ..+|.+.||.+.    ||..+. .++++||+++  ++    +++
T Consensus       344 ~-g~~~~-~~~~~~~~~~v~~~~~---g~-~~~~~-~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ed  416 (483)
T 1rv3_A          344 L-GYKIV-TGGSDNHLILVDLRSK---GT-DGGRA-EKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD  416 (483)
T ss_dssp             T-TCEEG-GGSCSSSEEEEEGGGG---TC-CHHHH-HHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred             c-CCEec-cCCCCCceEEEeccCC---CC-CHHHH-HHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHH
Confidence            8 78743 443 346778877532   11 44554 455678899999    887432 2579999995  35    899


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQR  407 (415)
Q Consensus       394 l~~~l~~l~~~~~~  407 (415)
                      ++++++.|.++++.
T Consensus       417 i~~~~~~l~~~l~~  430 (483)
T 1rv3_A          417 FQKVAHFIHRGIEL  430 (483)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998875

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.96  E-value=2.2e-29  Score=243.65  Aligned_cols=329  Identities=15%  Similarity=0.132  Sum_probs=215.3

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----C----C
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP-----G----A  125 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~-----g----d  125 (415)
                      +.+++++.+.+..+. ..|++..+..++|+++++++        ..+++++|+|+++|+.+++.++.++     |    |
T Consensus        53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~--------~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d  123 (467)
T 2oqx_A           53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK  123 (467)
T ss_dssp             SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHH--------CCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred             HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHh--------CcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence            677788888776543 36877778899999999998        3479999999999999999999888     8    9


Q ss_pred             EEEEcCCCCcchHHHHHhCCCeEEEeec----cCC----CCCCCChhHHHhhcC----CCceEEEecCCCCcc-ccCCCH
Q 014936          126 NILLPRPGFPIYELSAAFRHIEVRHFDL----LPD----KGWEVDLDDIESLAD----QNTVALVIINPGNPC-GNVYSY  192 (415)
Q Consensus       126 ~vi~~~p~y~~~~~~~~~~g~~~~~~~~----~~~----~~~~~~~~~l~~~~~----~~~~~v~i~~p~npt-G~~~~~  192 (415)
                      +|++..+.|..+.......|..+.....    +..    .++.+|+++|+++++    +++++|++++|+||+ |.+++.
T Consensus       124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~  203 (467)
T 2oqx_A          124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL  203 (467)
T ss_dssp             CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCH
T ss_pred             eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCH
Confidence            9888743334444455556666544321    111    234679999999987    368899999999998 899999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCC-c---------ccCCCCcccccc--cCCCCCeEEEccCccccCCC-CceEEEEEe
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGH-L---------VFGDKPFVPMGV--FGSTVPILTLGSLSKRWIVP-GWRLGWFVT  259 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~-~---------~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~  259 (415)
                      +++++|+++|++||+++|+|+++.. .         .+.+.....+..  ....+  +++.|+||.++++ |   ||+++
T Consensus       204 ~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~  278 (467)
T 2oqx_A          204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCM  278 (467)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEe
Confidence            9999999999999999999977654 1         223322212110  01112  4578999998776 5   78777


Q ss_pred             eCCCCCCChHHHHHHHHhhc--c----ccCCchhHHHHHHHHhhCCCcHHHH-HHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          260 TDPCGMFRKPKVVERMKKYF--D----ILGDPATFIQAAVPSILQQPDEVFF-KKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~a~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      +++. +.   +....++...  .    .....+.....++...++.    ++ ++..++..++++++.+.|+++ ++. +
T Consensus       279 ~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~----~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~  348 (467)
T 2oqx_A          279 KDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD----GMNLDWLAYRIAQVQYLVDGLEEI-GVV-C  348 (467)
T ss_dssp             CSGG-GH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHT-TCC-E
T ss_pred             cChh-HH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHC-CCe-e
Confidence            6520 00   1333343321  1    0112222222233232221    11 123445567788888999887 777 4


Q ss_pred             CCCCCceEEEEecCc--cccCCCCC-HHHHHHHHHhhcCeEEEcCCCC--C-----------CCCeEEEEee---CChhh
Q 014936          333 HKPEGSMAVMLKLNL--SLLDDIID-DIDFCFKLAKEESVIILPGTAV--G-----------LKNWLRVTFA---VDPYS  393 (415)
Q Consensus       333 ~~p~~g~~~~~~l~~--~~~~~~~~-~~~~~~~ll~~~gi~v~~g~~~--~-----------~~~~iRi~~~---~~~~~  393 (415)
                      . |.+++++|+.++.  .......- ...+...++.++||.+.|+..|  +           ..+++|++++   +++++
T Consensus       349 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~  427 (467)
T 2oqx_A          349 Q-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTH  427 (467)
T ss_dssp             E-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHH
T ss_pred             e-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHH
Confidence            4 7778889988742  11100000 3344666657789999985532  1           1379999996   78999


Q ss_pred             HHHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQRH  408 (415)
Q Consensus       394 l~~~l~~l~~~~~~~  408 (415)
                      +++++++|++++++.
T Consensus       428 i~~~~~~l~~~l~~~  442 (467)
T 2oqx_A          428 MDFIIEAFKHVKENA  442 (467)
T ss_dssp             HHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHhhh
Confidence            999999999988753

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.96  E-value=1.4e-27  Score=225.10  Aligned_cols=288  Identities=16%  Similarity=0.198  Sum_probs=206.1

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~  147 (415)
                      .|++ .+..++++.++++++      .+ +.+++++| ++++..++.++.++||+|+++.|+|++....    ++..|.+
T Consensus        48 ~~~~-~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~  118 (386)
T 1cs1_A           48 RRGN-PTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYR  118 (386)
T ss_dssp             TTCC-HHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCE
T ss_pred             CCCC-ccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCE
Confidence            4443 467899999999983      23 55666555 9999999999999999999999999975443    4677888


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      +..++.       .|++.+++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+||+|..+.+..    +
T Consensus       119 ~~~~~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~  184 (386)
T 1cs1_A          119 VLFVDQ-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----P  184 (386)
T ss_dssp             EEEECT-------TCHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----G
T ss_pred             EEEeCC-------CCHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----c
Confidence            888865       2789999999888999999999999999975   7888889999999999999999866431    2


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHH
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      + .+   +..+++.|+||.++.+|.|+ ||+++++       +++++.+..... .+...++..+.++...++.     +
T Consensus       185 ~-~~---~~di~~~s~sK~~~~~~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~  248 (386)
T 1cs1_A          185 L-AL---GADLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----L  248 (386)
T ss_dssp             G-GG---TCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----H
T ss_pred             c-cc---CceEEEEcCcccccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-----H
Confidence            2 22   24588999999999999987 9999864       246677765533 2345677777777666653     4


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcCCCCC----------------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCe
Q 014936          306 KKTLNLLKQSVDICYNKIKEIPCISCPHKP----------------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV  369 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi  369 (415)
                      ....+.+.++++.+.+.|++++.+..+..|                ..+.++.+.++.       ... .+...+.+.||
T Consensus       249 ~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~l~~~gi  320 (386)
T 1cs1_A          249 VPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------DEQ-TLRRFLGGLSL  320 (386)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------CHH-HHHHHHHTCSS
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------CHH-HHHHHHHhCCc
Confidence            556667777888888888776443211111                125566666642       223 34555677899


Q ss_pred             EEEcCCCC-------------------------CC-CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          370 IILPGTAV-------------------------GL-KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       370 ~v~~g~~~-------------------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .+.+.+..                         +. ++++|++++.  ++.++.+++|.+++++.
T Consensus       321 ~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~~~  383 (386)
T 1cs1_A          321 FTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAA  383 (386)
T ss_dssp             SEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHH
T ss_pred             ceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHHHh
Confidence            88742110                         11 4799999976  45566666666666543

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.96  E-value=5.3e-29  Score=238.24  Aligned_cols=344  Identities=15%  Similarity=0.034  Sum_probs=214.2

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+++.++||..+.....  ++ .+|.+++++.+++.......|+. ....++++.+++++    +   .++++++++|++
T Consensus        50 ~~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~~~~~~-~~~~~la~~l~~~~----~---~~~~v~~~~sGs  119 (429)
T 4e77_A           50 VDGKAYIDYVGSWGPMI--LGHNHPAIRQAVIEAVERGLSFGAPT-EMEVKMAQLVTDLV----P---TMDMVRMVNSGT  119 (429)
T ss_dssp             TTCCEEEESSGGGTTCT--TCBTCHHHHHHHHHHHTTCSCCSSCC-HHHHHHHHHHHHHS----T---TCSEEEEESSHH
T ss_pred             CCCCEEEECCCchhccc--cCCCCHHHHHHHHHHHHhCcccCCCC-HHHHHHHHHHHhhC----C---CCCEEEEeCcHH
Confidence            35788999998864322  33 57999999999987654334543 33455666666554    3   578999999999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHH-hCCCeEE--EeeccCCC------C----CCCChhHHHhhcCC--C
Q 014936          111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAA-FRHIEVR--HFDLLPDK------G----WEVDLDDIESLADQ--N  173 (415)
Q Consensus       111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~-~~g~~~~--~~~~~~~~------~----~~~~~~~l~~~~~~--~  173 (415)
                      ++++.+++...  .+++.|++..++|++....+. ..+....  ..+....-      .    ...|+++|+++++.  .
T Consensus       120 ea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~  199 (429)
T 4e77_A          120 EATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQ  199 (429)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCC
Confidence            99999998643  245789999999987665221 1111100  00100000      0    00278999988863  3


Q ss_pred             ceEEEecCCCCccc-cC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC
Q 014936          174 TVALVIINPGNPCG-NV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (415)
Q Consensus       174 ~~~v~i~~p~nptG-~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G  251 (415)
                      ..++++++|+|++| .+ .+.+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+   +.|+||.++ +|
T Consensus       200 ~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pd---i~t~sK~~~-~G  273 (429)
T 4e77_A          200 EVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPD---LTCLGKIIG-GG  273 (429)
T ss_dssp             TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCS---EEEEEGGGG-TT
T ss_pred             CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCC---eeeeccccc-CC
Confidence            45667788876554 43 34666999999999999999999999987 44432 12222222222   248899987 79


Q ss_pred             ceEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       252 ~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      +|+||+++++        ++++.+...    ...+++.+++++.++.++|+... ++..++..+.....++.+.+.+..+
T Consensus       274 ~~~G~~~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  345 (429)
T 4e77_A          274 MPVGAFGGRR--------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEE  345 (429)
T ss_dssp             SCCEEEEECH--------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEECH--------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999865        576666542    22345788899988888876321 2333333333333344444444444


Q ss_pred             CCCcCCCCCCCceEEEEecCccc-cC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHH
Q 014936          327 PCISCPHKPEGSMAVMLKLNLSL-LD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEEC  397 (415)
Q Consensus       327 ~~~~~~~~p~~g~~~~~~l~~~~-~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~  397 (415)
                      + +. ...+..|+++|+.++... ..        +.....++...++ ++||.+.|+..    ..+|+++..++++++++
T Consensus       346 ~-~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~  418 (429)
T 4e77_A          346 N-IP-LVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSAF----EAGFMSLAHSNEDIQKT  418 (429)
T ss_dssp             T-CC-CEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTTCCHHHHHHH
T ss_pred             C-Cc-eEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecCC----CCEEEeccCCHHHHHHH
Confidence            3 32 224556888998886421 00        0001155666664 56999998753    45777777899999999


Q ss_pred             HHHHHHHHH
Q 014936          398 LDRIKSFYQ  406 (415)
Q Consensus       398 l~~l~~~~~  406 (415)
                      +++|+++++
T Consensus       419 l~~l~~~l~  427 (429)
T 4e77_A          419 VNAARRCFA  427 (429)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            999998875

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.96  E-value=7.2e-29  Score=232.97  Aligned_cols=322  Identities=14%  Similarity=0.116  Sum_probs=223.1

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHH
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~  115 (415)
                      ++++++.+.|      ..++.+++++.+.+...   .|.+..+..++|+.++++++        .+++++++||++++..
T Consensus         4 ~~~~l~~~~~------~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~   66 (373)
T 3frk_A            4 SFASFKPMHD------EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHL   66 (373)
T ss_dssp             CSCCCHHHHH------HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHH
T ss_pred             cccCCCcccC------CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHH
Confidence            3456665542      23577888888887653   35555688999999999983        3589999999999999


Q ss_pred             HHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          116 AMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       116 ~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      ++.++ .++||+|+++.++|+++...++..|++++.+++++ +++.+|++++++++++++++++   |+||||...   +
T Consensus        67 ~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~---~  139 (373)
T 3frk_A           67 ILKGYDIGFGDEVIVPSNTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPA---D  139 (373)
T ss_dssp             HHHHTTCCTTCEEEEETTSCTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCC---C
T ss_pred             HHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCcc---c
Confidence            99999 89999999999999999999999999999999865 3467899999999988888777   778999984   5


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++|.++|+++|+++|+|++|+.+. +++.   ....+. +   +.+.|||  |.++..| +.|++++++       +++
T Consensus       140 l~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~-d---~~~~S~~~~K~l~~~g-~gg~~~~~~-------~~~  204 (373)
T 3frk_A          140 MDEIKRIAKKYNLKLIEDAAQAHGSLYKGM---KVGSLG-D---AAGFSFYPAKNLGSLG-DGGAVVTND-------KDL  204 (373)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSS-S---EEEEECCTTSSSCCSS-SCEEEEESC-------HHH
T ss_pred             HHHHHHHHHHcCCEEEEECCcccCCEECCE---eccccc-c---EEEEeCcCCCccCccc-eeEEEEeCC-------HHH
Confidence            7788888999999999999998644 2222   111111 1   6777877  8864434 378888764       246


Q ss_pred             HHHHHhhccc-------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc
Q 014936          272 VERMKKYFDI-------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS  338 (415)
Q Consensus       272 ~~~~~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g  338 (415)
                      .+.++.....             +...+.+...+....+     +.+++..++.+++.+++.+.|++++ +.....+.++
T Consensus       205 ~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~  278 (373)
T 3frk_A          205 AEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL-----KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYA  278 (373)
T ss_dssp             HHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTE
T ss_pred             HHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCC
Confidence            6666544321             1122444333333333     3366777888888899999998875 5522222222


Q ss_pred             eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-----------------------CCeEEEEee--CChhh
Q 014936          339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-----------------------KNWLRVTFA--VDPYS  393 (415)
Q Consensus       339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----------------------~~~iRi~~~--~~~~~  393 (415)
                      ...|..++..    ..+..++...| .++||.+.++.....                       .+.+|+++.  ++++|
T Consensus       279 ~~~~~~~~~~----~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~d  353 (373)
T 3frk_A          279 KHVWYTFVIR----SEKRDELQKYL-NNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEE  353 (373)
T ss_dssp             ECCCSSEEEE----ESSHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHH
T ss_pred             ceeeEEEEEE----eCCHHHHHHHH-HHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHH
Confidence            2222111110    01355565555 566999987652110                       157999994  68999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQR  407 (415)
Q Consensus       394 l~~~l~~l~~~~~~  407 (415)
                      ++.+++.|++...+
T Consensus       354 i~~~~~~l~~~~~~  367 (373)
T 3frk_A          354 IEYVIDKINAWKLE  367 (373)
T ss_dssp             HHHHHHHHHTCC--
T ss_pred             HHHHHHHHHHHhhh
Confidence            99999999877654

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.96  E-value=2.5e-28  Score=230.76  Aligned_cols=322  Identities=14%  Similarity=0.127  Sum_probs=222.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      -.++++++.+.|.    +  ++.+++++.+.+..+   .|+ +..+..++|+.++++++        .+++++++||+++
T Consensus        21 ~~~~~~l~~~~p~----~--~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~a   83 (391)
T 3dr4_A           21 MSDLPRISVAAPR----L--DGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTTA   83 (391)
T ss_dssp             -------CCCCCC----C--CSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHHH
T ss_pred             cCCCceeccCCCC----C--CHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHH
Confidence            4567889988864    2  367888888887653   344 55688999999999993        3488999999999


Q ss_pred             HHHHHHHh-cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          113 IDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       113 l~~~~~~l-~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      +..++.++ .++||+|+++.|+|+++...++..|.+++.+++++ +++.+|++++++++++++++++   |+||||... 
T Consensus        84 l~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~-  158 (391)
T 3dr4_A           84 LHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQIC-  158 (391)
T ss_dssp             HHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCC-
T ss_pred             HHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChh-
Confidence            99999999 89999999999999999999999999999999864 3567999999999988888766   567999984 


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCCh
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                        ++++|+++|+++|+++|+|++|+.+. +.+.   ....+. +   +.+.|||  |.  ++|.+.|++++++       
T Consensus       159 --~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~-d---i~~~S~s~~K~--l~~g~gg~~~~~~-------  220 (391)
T 3dr4_A          159 --DMDPILEVARRHNLLVIEDAAEAVGATYRGK---KSGSLG-D---CATFSFFGNAI--ITTGEGGMITTND-------  220 (391)
T ss_dssp             --CHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS-S---EEEEECBTTSS--SCCBSCEEEEESC-------
T ss_pred             --hHHHHHHHHHHcCCEEEEECcccccceECCe---eecccC-C---EEEEECCCCCc--CCcCCeEEEEECC-------
Confidence              57888889999999999999998643 2221   111221 1   6667766  66  4556789988865       


Q ss_pred             HHHHHHHHhhcccc---------------CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC
Q 014936          269 PKVVERMKKYFDIL---------------GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH  333 (415)
Q Consensus       269 ~~~~~~~~~~~~~~---------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  333 (415)
                      +++.+.++......               ...+.+...+....+     ..+++..++.+++++++.+.|+++ ++....
T Consensus       221 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  294 (391)
T 3dr4_A          221 DDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQL-----ERVDEHLAARERVVGWYEQKLARL-GNRVTK  294 (391)
T ss_dssp             HHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHGGG-TTSEEC
T ss_pred             HHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcC-CccccC
Confidence            24666655443211               122222222222222     346677788888888999999887 666332


Q ss_pred             C--C----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC---C-----------------CCCeEEEEe
Q 014936          334 K--P----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV---G-----------------LKNWLRVTF  387 (415)
Q Consensus       334 ~--p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~---~-----------------~~~~iRi~~  387 (415)
                      .  +    .....+++.++..  .+ .+..++...+ .++||.+.+|...   .                 ....+|+++
T Consensus       295 ~~~~~~~~~~~~~~~i~~~~~--~~-~~~~~l~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~  370 (391)
T 3dr4_A          295 PHVALTGRHVFWMYTVRLGEG--LS-TTRDQVIKDL-DALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPT  370 (391)
T ss_dssp             CCCCTTSCCCCSSEEEEECSS--CS-SCHHHHHHHH-HHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECC
T ss_pred             cCCCCCCcceeEEEEEEECCc--cc-hhHHHHHHHH-HHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccC
Confidence            2  1    1222345555431  01 2456666665 5669999987521   0                 035799998


Q ss_pred             e--CChhhHHHHHHHHHHHH
Q 014936          388 A--VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       388 ~--~~~~~l~~~l~~l~~~~  405 (415)
                      .  .++++++.+++.|++++
T Consensus       371 ~~~~t~edi~~~~~~l~~~l  390 (391)
T 3dr4_A          371 HAGLTEADIDRVIAALDQVL  390 (391)
T ss_dssp             CTTCCHHHHHHHHHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHHHHHh
Confidence            4  68999999999987653

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.96  E-value=1.1e-27  Score=228.80  Aligned_cols=335  Identities=12%  Similarity=0.102  Sum_probs=211.3

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHH----HHHHHHHhhhCCCCCCCCcEE
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTR----RAIAEYLSRDLPYKLTPNDVF  104 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr----~~ia~~~~~~~~~~~~~~~i~  104 (415)
                      .+.+++..+.      .+.++.+++++.+.+.......|+      .......++    +.+++++    |  .+. ..+
T Consensus        32 ~~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~----~--~~~-~~v   98 (425)
T 3ecd_A           32 QSQVELIASE------NIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLF----N--AGH-ANV   98 (425)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHH----T--CSE-EEC
T ss_pred             hcceeeeccc------CCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHh----C--CCC-cee
Confidence            3467886665      233899999998887532111222      111111222    3344444    2  222 234


Q ss_pred             EeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHH--HHhCCC--eEEEeeccCCCCCCCChhHHHhhcC-CCceEEE
Q 014936          105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPI-YELS--AAFRHI--EVRHFDLLPDKGWEVDLDDIESLAD-QNTVALV  178 (415)
Q Consensus       105 i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~-~~~~--~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~  178 (415)
                      +++||++++..++.++.++||+|+++.|+|++ ....  ....|.  .+..++.++ +++.+|+++|++.++ +++++|+
T Consensus        99 ~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~  177 (425)
T 3ecd_A           99 QPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLII  177 (425)
T ss_dssp             CCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEE
T ss_pred             ecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEE
Confidence            58899999999999999999999999999987 2222  223454  444555443 346799999999886 5789999


Q ss_pred             ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      +++|+||+  .   .++++|.++|+++|+++|+||+|.... +.+.....+..  .   .+++.|+||++  +|+|+||+
T Consensus       178 ~~~~~~~~--~---~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~--~---di~~~s~sK~l--~g~~~g~~  245 (425)
T 3ecd_A          178 AGFSAYPR--K---LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH--A---HVVTSTTHKTL--RGPRGGFV  245 (425)
T ss_dssp             EECSCCCS--C---CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT--C---SEEEEESSGGG--CCCSCEEE
T ss_pred             EccccCCC--c---CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc--C---cEEEecCCccc--CCCCcEEE
Confidence            99999964  3   457899999999999999999964433 33332222221  1   27889999996  67889999


Q ss_pred             EeeCCCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          258 VTTDPCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ++++       +.+.+.+.......  .+++.....++..++......++++..++++++++++.+.|++. ++.++..+
T Consensus       246 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  317 (425)
T 3ecd_A          246 LTND-------EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGG  317 (425)
T ss_dssp             EESC-------HHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGS
T ss_pred             EeCC-------HHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCC
Confidence            9874       24666665543321  23344444444434332223567888899999999999999886 77633223


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCCCCC--CCCeEEEEee------CChhhHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGTAVG--LKNWLRVTFA------VDPYSLEECLDRIKS  403 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~--~~~~iRi~~~------~~~~~l~~~l~~l~~  403 (415)
                      ..++++|+.++...    .+. +.+...|.++||.+.    ||..+.  ..+++|+++.      .++++++++++.|++
T Consensus       318 ~~~~~~~~~~~~~~----~~~-~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~  392 (425)
T 3ecd_A          318 TDNHLLLVDLRPKG----LKG-AQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE  392 (425)
T ss_dssp             CSSSEEEEECGGGT----CCH-HHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred             CCceEEEEEeCCCC----CCH-HHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence            56788888875321    133 445555677899999    443221  2468999962      348999999999999


Q ss_pred             HHHHH
Q 014936          404 FYQRH  408 (415)
Q Consensus       404 ~~~~~  408 (415)
                      ++++.
T Consensus       393 ~l~~~  397 (425)
T 3ecd_A          393 VFEAL  397 (425)
T ss_dssp             HHHHH
T ss_pred             HHhcc
Confidence            98775

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.96  E-value=8e-29  Score=239.47  Aligned_cols=332  Identities=11%  Similarity=0.060  Sum_probs=226.0

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHh----cC---CCCCCC-CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALL----SE---KFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~----~~---~~~~y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      ++.+.|+.+...     +.++.+.+++.+.+.    .+   ....|. ......++++.+++++      +.++++|++|
T Consensus        66 ~~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t  134 (465)
T 3e9k_A           66 ENAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV------GANEKEIALM  134 (465)
T ss_dssp             CBCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH------TCCGGGEEEC
T ss_pred             CCeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc------CCCcCCEEEE
Confidence            466777766532     223445555544432    11   111121 1233467888888887      4578999999


Q ss_pred             CChHHHHHHHHHHhcCCCCE---EEEcCCCCcchHH----HHHhCCCeEEE--eecc-CCCCCCCChhHHHhhcC---CC
Q 014936          107 SGCTQAIDVAMALLSRPGAN---ILLPRPGFPIYEL----SAAFRHIEVRH--FDLL-PDKGWEVDLDDIESLAD---QN  173 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~---vi~~~p~y~~~~~----~~~~~g~~~~~--~~~~-~~~~~~~~~~~l~~~~~---~~  173 (415)
                      +|+++++++++.++.++|+.   |+++.|+|++...    .++..|+++..  +.+. .++++.+|+++++++++   ++
T Consensus       135 ~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~  214 (465)
T 3e9k_A          135 NALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDS  214 (465)
T ss_dssp             SCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGG
T ss_pred             CCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCC
Confidence            99999999999999876654   9999999987443    56678887532  1211 22456789999999986   57


Q ss_pred             ceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       174 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                      +++|++++|+||||.+++   +++|.++|+++|+++|+|++|+...    ....+...+.   .++++|++|.+..+..+
T Consensus       215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~----~~~~~~~~~~---D~~~~s~~K~l~~gp~~  284 (465)
T 3e9k_A          215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGN----VELYLHDWGV---DFACWCSYKYLNAGAGG  284 (465)
T ss_dssp             EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHHTC---CEEEECSSSTTCCCTTC
T ss_pred             eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCC----cCCchhhcCC---CEEEECcccccccCCCc
Confidence            899999999999999976   6778888999999999999998632    2223333333   37888999997433336


Q ss_pred             EEEEEeeCCCCCCChHHHHHHHHhh--------------------------ccccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936          254 LGWFVTTDPCGMFRKPKVVERMKKY--------------------------FDILGDPATFIQAAVPSILQQPDEVFFKK  307 (415)
Q Consensus       254 ~G~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~  307 (415)
                      +|++++++.        +.+.+...                          ....++++.....++.++++...+..+++
T Consensus       285 ~g~l~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~  356 (465)
T 3e9k_A          285 IAGAFIHEK--------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKA  356 (465)
T ss_dssp             CCEEEECGG--------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred             eEEEEEcHH--------HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHH
Confidence            899888652        21111100                          00112566666676666665432234788


Q ss_pred             HHHHHHHHHHHHHHHhhcC----------CCCcCCCCCC----CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc
Q 014936          308 TLNLLKQSVDICYNKIKEI----------PCISCPHKPE----GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP  373 (415)
Q Consensus       308 ~~~~~~~~~~~l~~~l~~~----------~~~~~~~~p~----~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~  373 (415)
                      .+++.+++++++.+.|+++          +++.++ .|.    .|.++++.++.       +..++...+ .++||.+..
T Consensus       357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~-~p~~~~~~g~~~~~~~~~-------~~~~l~~~L-~~~Gi~v~~  427 (465)
T 3e9k_A          357 LRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNII-TPSHVEERGCQLTITFSV-------PNKDVFQEL-EKRGVVCDK  427 (465)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCC---------CEEEC-SCSSGGGBCSCEEEEECC-------TTCCHHHHH-HTTTEECEE
T ss_pred             HHHHHHHHHHHHHHHHHhhccccccccCCCCeEEe-CCCCHhhcccEEEEEecC-------CHHHHHHHH-HHCCEEEec
Confidence            8899999999999999874          677733 554    36788877752       234556665 456999873


Q ss_pred             CCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHHHHHH
Q 014936          374 GTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       374 g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                          ..++++|+++ .  ++.++++.+++.|++++++.
T Consensus       428 ----~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~  461 (465)
T 3e9k_A          428 ----RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA  461 (465)
T ss_dssp             ----ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred             ----CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence                2368999997 3  58899999999999988653

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.96  E-value=2.3e-27  Score=223.65  Aligned_cols=284  Identities=17%  Similarity=0.153  Sum_probs=209.7

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~  152 (415)
                      ....++++.+++++        ..+++++++|+++++..++.++.++||+|+++.|+|+++...+    ...|.++..++
T Consensus        66 ~~~~~l~~~la~~~--------g~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~  137 (392)
T 3qhx_A           66 PTRTALEAALAAVE--------DAAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA  137 (392)
T ss_dssp             HHHHHHHHHHHHHT--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence            45678899999987        2347899999999999999999999999999999999877666    66799998887


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      .+       |++++++++++++++|++.+|+||||.+.+   +++|+++|+++|+++|+|++|+.+...    .+. .++
T Consensus       138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~----~~~-~~~  202 (392)
T 3qhx_A          138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ----QPL-SLG  202 (392)
T ss_dssp             TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGG-GGT
T ss_pred             CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC----ChH-HhC
Confidence            52       899999999999999999999999999965   888999999999999999999864321    111 222


Q ss_pred             CCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLN  310 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  310 (415)
                      .   .+++.|+||.++.+| +++||+++++       +++.+.+..... .+...++..+.++...++.     +..+.+
T Consensus       203 ~---di~~~S~sK~lg~~g~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~~~~  267 (392)
T 3qhx_A          203 A---DVVLHSTTKYIGGHSDVVGGALVTND-------EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-----LVLRMQ  267 (392)
T ss_dssp             C---SEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred             C---cEEEEcCccccCCCCCceEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHHH
Confidence            2   388999999998877 7999999864       246676665532 4566778888888877765     556667


Q ss_pred             HHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcC
Q 014936          311 LLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG  374 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g  374 (415)
                      +..++++.+.+.|++.|.+..+.+|.                .|..+++.++...    .....++.. ++..++.++.|
T Consensus       268 ~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----~~~~~~~~~-l~~~~~~~s~G  342 (392)
T 3qhx_A          268 RHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----TAAEQLCAK-TNIFILAESLG  342 (392)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----HHHHHHHHH-CSSSEECSCCC
T ss_pred             HHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----HHHHHHHHh-CCCceECCCCC
Confidence            77888888888888876653232322                2567788785310    123344333 45567777777


Q ss_pred             CCCC--------------------CCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          375 TAVG--------------------LKNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       375 ~~~~--------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                      +.+.                    .++.||||++.  ++.++.++.|.+++
T Consensus       343 ~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~al  391 (392)
T 3qhx_A          343 SVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQAL  391 (392)
T ss_dssp             CSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred             CCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHHh
Confidence            6532                    14679999975  35555566555543

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.96  E-value=4.2e-27  Score=221.87  Aligned_cols=281  Identities=13%  Similarity=0.143  Sum_probs=203.1

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~  152 (415)
                      ....++++.++++++        .++.+++++|++++..++.++.++||+|+++.|+|+++...    ++..|.++..++
T Consensus        59 ~~~~~l~~~la~~~g--------~~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~  130 (389)
T 3acz_A           59 PTVEQFEEMVCSIEG--------AAGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID  130 (389)
T ss_dssp             HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             hHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence            456789999999983        23677777888999999999999999999999999986665    577899999887


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      .       .|++++++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|..+.+.    .++. ++
T Consensus       131 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~----~~~~-~~  195 (389)
T 3acz_A          131 T-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL----KPLE-LG  195 (389)
T ss_dssp             T-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGGG-TT
T ss_pred             C-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc----Cccc-cC
Confidence            5       3899999999989999999999999999976   788888999999999999999876532    1221 22


Q ss_pred             CCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLN  310 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  310 (415)
                         ..+++.|+||.++.+|.|+ ||+++++       +++++.++.... ...+.++..+.++...++.     +..+.+
T Consensus       196 ---~di~~~S~sK~~~~~~~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~~  260 (389)
T 3acz_A          196 ---ADIALHSVSKYINGHGDVIGGVSSAKT-------AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT-----LPIRMQ  260 (389)
T ss_dssp             ---CSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred             ---CeEEEECChhhccCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-----HHHHHH
Confidence               3488999999999999998 9998864       146666665532 3455677777777777764     344445


Q ss_pred             HHHHHHHHHHHHhhcCCCCcCCCC----------------CCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc-
Q 014936          311 LLKQSVDICYNKIKEIPCISCPHK----------------PEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP-  373 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~~~~~~~~~~----------------p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~-  373 (415)
                      +..+++..+.+.+++.+.+..+..                ...|.++.+.++        . .+....++.+.||.+.+ 
T Consensus       261 ~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--------~-~~~~~~~l~~~~i~~~~~  331 (389)
T 3acz_A          261 IHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--------S-FEAAKKLMEHLKVCTLAV  331 (389)
T ss_dssp             HHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--------S-HHHHHHHHTTCSSSEEBS
T ss_pred             HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--------C-HHHHHHHHHhCCCcEECc
Confidence            555566666666655432111111                122456666664        2 33455667778988876 


Q ss_pred             --C------CCC----------------CC-CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          374 --G------TAV----------------GL-KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       374 --g------~~~----------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                        |      ..|                +. ++.||+|++..  +.++.++.|.++++
T Consensus       332 s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~  387 (389)
T 3acz_A          332 SLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE  387 (389)
T ss_dssp             CCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred             CCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence              4      222                11 47999999764  66777777777654

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.96  E-value=8.8e-29  Score=237.72  Aligned_cols=335  Identities=12%  Similarity=0.100  Sum_probs=221.3

Q ss_pred             cCcceeEecccCCCCCCCCC-CcHHHH-H-HHHH---HHhcCCCC--CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q 014936           33 NEKKVISLAMGDPTVHSCFH-TTHVAT-E-AVAE---ALLSEKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF  104 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~-~-a~~~---~~~~~~~~--~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~  104 (415)
                      +++.++||..+.+...  ++ .+|.++ + ++.+   .+....+.  .|.. ....++++.+++++    + ...+++|+
T Consensus        52 ~g~~ylD~~~~~~~~~--lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~-~~~~~la~~la~~~----~-~~~~~~v~  123 (449)
T 2cjg_A           52 TGRRYLDMFTFVASSA--LGMNPPALVDDREFHAELMQAALNKPSNSDVYS-VAMARFVETFARVL----G-DPALPHLF  123 (449)
T ss_dssp             TCCEEEESSHHHHTCS--SCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCC-HHHHHHHHHHHHHH----C-CTTCCEEE
T ss_pred             CCcEEEEccCCccccC--CCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCC-HHHHHHHHHHHHhc----C-CCCCCEEE
Confidence            3567888877764322  33 479999 8 9998   76653221  1322 22345556666655    2 24678999


Q ss_pred             EeCChHHHHHHHHHHhc---C----------C-CCEEEEcCCCCcchHHHHHhC---------CC-----eEEEeeccCC
Q 014936          105 VTSGCTQAIDVAMALLS---R----------P-GANILLPRPGFPIYELSAAFR---------HI-----EVRHFDLLPD  156 (415)
Q Consensus       105 i~~g~~~al~~~~~~l~---~----------~-gd~vi~~~p~y~~~~~~~~~~---------g~-----~~~~~~~~~~  156 (415)
                      +++|++++++.+++.+.   +          + ||+|++.+|+|+++...+...         +.     ++..++.+..
T Consensus       124 ~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  203 (449)
T 2cjg_A          124 FVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRP  203 (449)
T ss_dssp             EESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCT
T ss_pred             EeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCc
Confidence            99999999999997653   2          2 899999999999765533221         11     3444444210


Q ss_pred             CCC--------CCChhHHHhhcC---CCceEEEecCC-CCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCC
Q 014936          157 KGW--------EVDLDDIESLAD---QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK  223 (415)
Q Consensus       157 ~~~--------~~~~~~l~~~~~---~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~  223 (415)
                      ...        ..+++.|++.++   +++++ ++++| +||+| ..++.+.+++|.++|++||+++|+||+|.++.+.|.
T Consensus       204 ~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~  282 (449)
T 2cjg_A          204 GLDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT  282 (449)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHSTTTEEE-EEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred             hhhccccchhhHHHHHHHHHHHHhcCCceEE-EEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc
Confidence            011        134566888774   45555 55556 68999 589999999999999999999999999998766554


Q ss_pred             CcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH-----Hhh-ccccCCchhHHHHHHHHhh
Q 014936          224 PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM-----KKY-FDILGDPATFIQAAVPSIL  297 (415)
Q Consensus       224 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~a~~~~l  297 (415)
                      .. .+..++...++   .|+||.+     |+||+++++        ++++.+     ... ...+++.+++++.++.++|
T Consensus       283 ~~-~~~~~~~~~di---~t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal  345 (449)
T 2cjg_A          283 AW-AYQQLDVAPDI---VAFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRIL  345 (449)
T ss_dssp             SS-THHHHTCCCSE---EEECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHH
T ss_pred             ce-eecccCCCceE---EEecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHH
Confidence            21 22222222223   3789996     799999865        344431     111 2234667889999998888


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHhhc----CCC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936          298 QQPDEVFFKKTLNLLKQSVDICYNKIKE----IPC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL  372 (415)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~  372 (415)
                      +...+   +...++++++++++.+.|++    +|. +. . .+..|.|++++++..     .+..++...++ ++||.+.
T Consensus       346 ~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l~-~~Gv~v~  414 (449)
T 2cjg_A          346 EVIEA---EGLFERAVQHGKYLRARLDELAADFPAVVL-D-PRGRGLMCAFSLPTT-----ADRDELIRQLW-QRAVIVL  414 (449)
T ss_dssp             HHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSE-E-EEEETTEEEEECSSH-----HHHHHHHHHHH-HTTEECE
T ss_pred             HHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-e-EeeccEEEEEEECCh-----HHHHHHHHHHH-HCCeEEe
Confidence            64211   34567777788888887775    343 43 2 234466777777531     12456777775 5799999


Q ss_pred             cCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHHH
Q 014936          373 PGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       373 ~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      |+.    .+++|+++  ..+++++++++++|+++++++
T Consensus       415 ~~g----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  448 (449)
T 2cjg_A          415 PAG----ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV  448 (449)
T ss_dssp             EET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            874    48999977  478999999999999988653

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.96  E-value=5.1e-27  Score=223.07  Aligned_cols=307  Identities=17%  Similarity=0.132  Sum_probs=213.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC--CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL  128 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi  128 (415)
                      ++.++.+.+++.   .. ..+.|+..  ....++++.++++++        .+++++++|+++++..++.++.++||+|+
T Consensus        32 ~~~~~~~~~~~~---~~-~~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd~vi   99 (412)
T 2cb1_A           32 FKTLEEGQERFA---TG-EGYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGDEVV   99 (412)
T ss_dssp             CSSHHHHHHHHH---HC-CSCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEE
T ss_pred             cCChHHHHHHhc---cc-cCcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence            555666666553   22 22355543  457889999999882        34899999999999999999999999999


Q ss_pred             EcCCCCcchHHH----HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          129 LPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       129 ~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      ++.|+|++....    ++..|.++..++.        |+++|++++++++++|++++|+||||.+.+   +++|+++|++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~  168 (412)
T 2cb1_A          100 AAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE  168 (412)
T ss_dssp             EETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred             EeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence            999999876654    3457888888764        489999999989999999999999999975   8888999999


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCC------C------------
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM------F------------  266 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~------~------------  266 (415)
                      +|+++|+|++|+.+.+..   .+. ..   +..+++.|+||.++.+|.|+|++++.++...      .            
T Consensus       169 ~~~~li~D~~~~~~~~~~---~~~-~~---~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  241 (412)
T 2cb1_A          169 AGVALVVDNTFGAAGALC---RPL-AW---GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE  241 (412)
T ss_dssp             HTCEEEEECGGGTTTTSC---CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred             cCCEEEEECCCccccccC---Ccc-cc---CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence            999999999998752211   111 12   2348899999999999999999988663210      0            


Q ss_pred             --ChHHHHHHHHhhc-c-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-------
Q 014936          267 --RKPKVVERMKKYF-D-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-------  335 (415)
Q Consensus       267 --~~~~~~~~~~~~~-~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-------  335 (415)
                        ...++.+.++... . .....++....++...++.     ++.+.++..++.+.+.+.|.+.+++..+..|       
T Consensus       242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~  316 (412)
T 2cb1_A          242 ALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA  316 (412)
T ss_dssp             HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence              0003444454432 1 1223345555554445543     4556666778889999999988777633223       


Q ss_pred             ---------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCC---------CCC----------------C-C
Q 014936          336 ---------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGT---------AVG----------------L-K  380 (415)
Q Consensus       336 ---------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~---------~~~----------------~-~  380 (415)
                               ..+.++.+.+ .       +... +...+.+.||.+ .++         .|.                . +
T Consensus       317 ~~~~~~~~~~~~~iv~~~~-~-------~~~~-~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~  386 (412)
T 2cb1_A          317 HRNARKYLASGGPILTLDL-G-------DLER-ASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTP  386 (412)
T ss_dssp             HHHHHHHCSSSCSEEEEEC-S-------SHHH-HHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCT
T ss_pred             HHHHHHhCCCCceEEEEEe-C-------CHHH-HHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCC
Confidence                     2344666666 2       2333 455567789998 764         221                0 5


Q ss_pred             CeEEEEeeC--ChhhHHHHHHHHH
Q 014936          381 NWLRVTFAV--DPYSLEECLDRIK  402 (415)
Q Consensus       381 ~~iRi~~~~--~~~~l~~~l~~l~  402 (415)
                      +.||+|++.  ++++++.+.+.|+
T Consensus       387 ~~iR~s~g~~~~~~~i~~l~~al~  410 (412)
T 2cb1_A          387 GLVRVSVGLEDPLDLLALFEEALE  410 (412)
T ss_dssp             TEEEEECCSSCHHHHHHHHHHHHH
T ss_pred             CeEEEEeccCCHHHHHHHHHHHHh
Confidence            789999963  4567776666664

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.96  E-value=2.1e-28  Score=233.54  Aligned_cols=326  Identities=12%  Similarity=0.059  Sum_probs=206.1

Q ss_pred             CcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCE
Q 014936           53 TTHVATEAVAEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN  126 (415)
Q Consensus        53 ~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~  126 (415)
                      .+|.+++++.+.+.......|      +.......+++...+++.+..|  +++++|++++| ++++..++.++.++||+
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~  118 (420)
T 3gbx_A           42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT  118 (420)
T ss_dssp             CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred             CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence            589999999888743221122      2222333444433333333333  45556656555 88999999999999999


Q ss_pred             EEEcCCCCcchH---HHHHhCC--CeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCCCCccccCCCHHHHHHHHH
Q 014936          127 ILLPRPGFPIYE---LSAAFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAE  200 (415)
Q Consensus       127 vi~~~p~y~~~~---~~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~  200 (415)
                      |+++.|+|..+.   ......|  .....++.+  .++.+|+++|++++++ +++++++++|+||+  ..   ++++|++
T Consensus       119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~---~l~~l~~  191 (420)
T 3gbx_A          119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VV---DWAKMRE  191 (420)
T ss_dssp             EEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CC---CHHHHHH
T ss_pred             EEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--cc---CHHHHHH
Confidence            999999998743   2212233  344444443  4567899999999876 58899998999874  43   3889999


Q ss_pred             HHhhcCcEEEEccccCCccc-CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc
Q 014936          201 TANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF  279 (415)
Q Consensus       201 ~~~~~~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~  279 (415)
                      +|++||+++|+||+|..+.. .+.....+.   .  ..+++.|+||+++  |.+.||+++++.-     .++.+.++...
T Consensus       192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~---~--~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~  259 (420)
T 3gbx_A          192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVP---H--AHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAV  259 (420)
T ss_dssp             HHHHTTCEEEEECTTTHHHHHTTSSCCSTT---T--SSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHH
T ss_pred             HHHHcCCEEEEECCcchhceecccCCcccc---c--CCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhc
Confidence            99999999999999865432 222121211   1  2388999999974  4556999886410     13556665543


Q ss_pred             cc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHH
Q 014936          280 DI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDI  357 (415)
Q Consensus       280 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~  357 (415)
                      ..  ..+++...+.++..++....+.++++..++++++++++.+.|++. ++.++..+..++++|+.++...     ...
T Consensus       260 ~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----~~~  333 (420)
T 3gbx_A          260 FPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN-----LTG  333 (420)
T ss_dssp             C----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT-----CCH
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC-----CCH
Confidence            21  123444444444434433223667888999999999999999885 7773322356788888775321     123


Q ss_pred             HHHHHHHhhcCeEEEc-------CCCCCCCCeEEEEee------CChhhHHHHHHHHHHHHHH
Q 014936          358 DFCFKLAKEESVIILP-------GTAVGLKNWLRVTFA------VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       358 ~~~~~ll~~~gi~v~~-------g~~~~~~~~iRi~~~------~~~~~l~~~l~~l~~~~~~  407 (415)
                      +.+...++++||.+.|       +..|+ ...+||++.      .++++++.+++.|++++++
T Consensus       334 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~  395 (420)
T 3gbx_A          334 KEADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN  395 (420)
T ss_dssp             HHHHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence            4455556788999998       33333 356999993      3578999999999888754

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.96  E-value=4.7e-28  Score=226.85  Aligned_cols=304  Identities=14%  Similarity=0.171  Sum_probs=220.2

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcC
Q 014936           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR  131 (415)
Q Consensus        53 ~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~  131 (415)
                      ..+++++++.+.+..+   .|.+..+..++|+.++++++        .+++++++||++++..++.++ .++||+|+++.
T Consensus        14 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~   82 (367)
T 3nyt_A           14 IKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITPG   82 (367)
T ss_dssp             HHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred             cCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECC
Confidence            4578888888887653   34455678999999999983        348999999999999999999 79999999999


Q ss_pred             CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936          132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA  211 (415)
Q Consensus       132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  211 (415)
                      ++|+++...+...|++++.++++++ .+.+|++++++++++++++|+   |+||+|..   .++++|.++|+++|+++|+
T Consensus        83 ~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~---~~~~~i~~la~~~~~~li~  155 (367)
T 3nyt_A           83 FTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQC---ADFDAINAIASKYGIPVIE  155 (367)
T ss_dssp             SSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCC---CCHHHHHHHHHHTTCCBEE
T ss_pred             CccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccCh---hhHHHHHHHHHHcCCEEEE
Confidence            9999999999999999999998653 467999999999988888766   78899977   5688888899999999999


Q ss_pred             ccccCCcc-cCCCCcccccccCCCCCeEEEccC--ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc--------
Q 014936          212 DEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--------  280 (415)
Q Consensus       212 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--------  280 (415)
                      |++|+.+. +.+..   +..++    .+.+.||  +|.++.+|. .|++++++       +++.+.++....        
T Consensus       156 D~a~~~g~~~~~~~---~~~~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~~~g~~~~~~  220 (367)
T 3nyt_A          156 DAAQSFGASYKGKR---SCNLS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIARHGQDRRYH  220 (367)
T ss_dssp             ECTTTTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHTBTTEEETTE
T ss_pred             ECccccCCeECCee---ccCCC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHHhcCCCcCce
Confidence            99998643 33221   22222    2777886  899876566 78888854       357666665432        


Q ss_pred             -----ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc----eEEEEecCccccC
Q 014936          281 -----ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS----MAVMLKLNLSLLD  351 (415)
Q Consensus       281 -----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g----~~~~~~l~~~~~~  351 (415)
                           .+...++....++...++.     +++..++.+++++++.+.|+++ ++.....+.++    ..+++.++     
T Consensus       221 ~~~~g~~~~~~~~~aa~~~~~l~~-----~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~-----  289 (367)
T 3nyt_A          221 HIRVGVNSRLDTLQAAILLPKLEI-----FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD-----  289 (367)
T ss_dssp             ECSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS-----
T ss_pred             eeccCcCCCccHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC-----
Confidence                 1344566666666555543     5666677778888888888877 44422122221    12333332     


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCC--------CC-C-----------CCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTA--------VG-L-----------KNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~--------~~-~-----------~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                         +..++...| +++||.+.++..        |. .           ...+|+++.  .+++|++..++.|++.
T Consensus       290 ---~~~~l~~~L-~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          290 ---NRESVQASL-KAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             ---SHHHHHHHH-HHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             ---CHHHHHHHH-HHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence               345555554 667999877643        11 0           346899984  6899999999988754

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.96  E-value=5.3e-27  Score=216.60  Aligned_cols=276  Identities=13%  Similarity=0.075  Sum_probs=194.8

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeeccCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPD  156 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~~~  156 (415)
                      ++++.+|++++      .+  +.+++++|++++..++.++.++||+|+++.|+|+++...+    +..|.++..++.   
T Consensus         2 ~l~~~la~~~g------~~--~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---   70 (331)
T 1pff_A            2 ALEGKIAKLEH------AE--ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             hHHHHHHHHhC------CC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence            68999999983      33  4555555589999999999999999999999999877664    458999888865   


Q ss_pred             CCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh-cCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       157 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                          .|++++++.++++++++++++|+||||.+++   +++|.++|++ +|+++|+|++|+.+.+.    .++ ..   +
T Consensus        71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~~---~  135 (331)
T 1pff_A           71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-DL---G  135 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-GG---T
T ss_pred             ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-hc---C
Confidence                4789999999888999999999999999985   8888999999 99999999999875542    122 22   3


Q ss_pred             CeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHH
Q 014936          236 PILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLL  312 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~  312 (415)
                      ..+++.|+||.|+.+|.| +||+++++       +++.+.++.....  +.+.++..+.++...++.     +..+.+..
T Consensus       136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~  203 (331)
T 1pff_A          136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRA  203 (331)
T ss_dssp             CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred             CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHH
Confidence            458999999999999999 79998853       2577777766443  446777777776666642     33334444


Q ss_pred             HHHHHHHHHHhhcC--------------CCCcCCC--CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936          313 KQSVDICYNKIKEI--------------PCISCPH--KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA  376 (415)
Q Consensus       313 ~~~~~~l~~~l~~~--------------~~~~~~~--~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~  376 (415)
                      .++.+.+.+.+++.              |++..+.  ....+.++.+.++        +..+ +...+.+.||.+.+.+.
T Consensus       204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~l~~~gI~~~~~s~  274 (331)
T 1pff_A          204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------GLEK-AKKVLDNCHVVSLAVSL  274 (331)
T ss_dssp             HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------SHHH-HHHHHHTCSSSEECSSC
T ss_pred             HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------CHHH-HHHHHHhCCCceeccCC
Confidence            44555555444432              2222100  0123556666664        2333 45556788998765421


Q ss_pred             -------------------------CCC-CCeEEEEeeC--ChhhHHHHHHHHHH
Q 014936          377 -------------------------VGL-KNWLRVTFAV--DPYSLEECLDRIKS  403 (415)
Q Consensus       377 -------------------------~~~-~~~iRi~~~~--~~~~l~~~l~~l~~  403 (415)
                                               ++. ++++|++++.  ++++++.+++.|++
T Consensus       275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~  329 (331)
T 1pff_A          275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL  329 (331)
T ss_dssp             CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence                                     122 5799999963  56777777777654

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.96  E-value=5e-27  Score=223.36  Aligned_cols=284  Identities=13%  Similarity=0.103  Sum_probs=203.9

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~  153 (415)
                      ...++|+.++++++      ..  +.+++++|++++..++.+++++||+|+++.++|+++...    ++..|+++..++.
T Consensus       115 ~~~~l~~~lA~l~g------~~--~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~  186 (445)
T 1qgn_A          115 TTVVLEEKISALEG------AE--STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP  186 (445)
T ss_dssp             HHHHHHHHHHHHHT------CS--EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred             HHHHHHHHHHHHhC------CC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence            45689999999873      22  445555556999999999999999999999999987664    4567999988875


Q ss_pred             cCCCCCCCChhHHHhhcCCCc-eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          154 LPDKGWEVDLDDIESLADQNT-VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~-~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                      +       |++++++++++++ ++|++++|+||||.+.+   +++|+++|+++|+++|+|++|+.+...    .++ .++
T Consensus       187 ~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~-~~g  251 (445)
T 1qgn_A          187 A-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL-ALG  251 (445)
T ss_dssp             S-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-TTT
T ss_pred             C-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-ccC
Confidence            2       7999999998888 99999999999999976   678888999999999999999864321    111 222


Q ss_pred             CCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLN  310 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  310 (415)
                      .   .+++.|+||.++..| .++||+++++        ++++.+..... .....++....++...++.     +..+.+
T Consensus       252 ~---Div~~S~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~  315 (445)
T 1qgn_A          252 A---DLVLHSATKFLGGHNDVLAGCISGPL--------KLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQ  315 (445)
T ss_dssp             C---SEEEECTTTTTTCSSSCCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred             C---EEEEECCcccccccccceEEEEEECH--------HHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-----HHHHHH
Confidence            2   388999999987665 4799999865        57777765433 2334566655555556643     555666


Q ss_pred             HHHHHHHHHHHHhhcCCCCcCCCCC----------------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcC
Q 014936          311 LLKQSVDICYNKIKEIPCISCPHKP----------------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPG  374 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g  374 (415)
                      +..++++.+.+.|++.|++..+.+|                ..|.++++.++..    ......++.. ++..++.++.|
T Consensus       316 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~----~~~~~~~l~~-l~~~~i~~s~G  390 (445)
T 1qgn_A          316 QQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD----LLTTAKFVDA-LKIPYIAPSFG  390 (445)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC----HHHHHHHHHH-CSSSEECSCCC
T ss_pred             HHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC----HHHHHHHHHh-CCCceEeccCC
Confidence            7777788899999888776223334                1466777777531    0012333333 23347777777


Q ss_pred             CCCC----------------------C-CCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          375 TAVG----------------------L-KNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       375 ~~~~----------------------~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      +.+.                      . ++.||+|++  .|+++.+++.|++++++
T Consensus       391 ~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--~Edid~li~~L~~al~~  444 (445)
T 1qgn_A          391 GCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--VEDFDDLKADILQALDS  444 (445)
T ss_dssp             SSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--SSCHHHHHHHHHHHHHH
T ss_pred             CCceeeecccccccccCCHHHHHhcCCCCCeEEEEec--cCCHHHHHHHHHHHHhh
Confidence            6542                      1 478999998  46799999999888763

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.96  E-value=4.8e-28  Score=232.53  Aligned_cols=336  Identities=14%  Similarity=0.080  Sum_probs=221.4

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCcHHHH--HHHH-HHHhhhCCCCCCCCcEEE-eCC
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGLPLTR--RAIA-EYLSRDLPYKLTPNDVFV-TSG  108 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g~~~lr--~~ia-~~~~~~~~~~~~~~~i~i-~~g  108 (415)
                      ..++|..+.      .+.+|.+++++.+.+.+.....|+.   ..|...++  +.++ +++.+.+|  ++  ...+ ++|
T Consensus        46 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g--~~--~~~v~~~s  115 (447)
T 3h7f_A           46 DTLEMIASE------NFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG--AE--FANVQPHS  115 (447)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CS--EEECCCSS
T ss_pred             CceeEecCC------CCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcC--CC--ceEEEeCC
Confidence            568885543      2348999999988775322223332   12434433  3344 44444333  22  3444 888


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchH-HH----HHhCCCeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCC
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYE-LS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINP  182 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~-~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p  182 (415)
                      |++++..++.+++++||+|+++.|+|.++. ..    ....+..+..+++++ .++.+|+++++++++ .+++++++++|
T Consensus       116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~  194 (447)
T 3h7f_A          116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWS  194 (447)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred             HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence            899999999999999999999999997732 11    122344556666544 345789999999885 36788888899


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      +||++.     ++++|.++|+++|+++|+||+|.. +.+.+....++   ..  ..+++.|+||++  +|+|.||+++++
T Consensus       195 ~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~---~~--~di~~~s~sK~l--~G~~gG~i~~~~  262 (447)
T 3h7f_A          195 AYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV---PH--ADVVSTTVHKTL--GGGRSGLIVGKQ  262 (447)
T ss_dssp             SCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST---TT--CSEEEEESSGGG--CCCSCEEEEECG
T ss_pred             CCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC---CC--CcEEEecCCcCC--CCCCeEEEEECH
Confidence            999876     589999999999999999999754 33333322222   11  127789999985  478999999865


Q ss_pred             CCCCCChHHHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC----CCCcCCCCC
Q 014936          262 PCGMFRKPKVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI----PCISCPHKP  335 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~p  335 (415)
                              ++.+.+.....  ..++++...+.++..++....+.++++..+++.++++++.+.|++.    +++..+..+
T Consensus       263 --------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~  334 (447)
T 3h7f_A          263 --------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGG  334 (447)
T ss_dssp             --------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGS
T ss_pred             --------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCC
Confidence                    46666655422  1233333334444444443333567888899999999999999875    467633234


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCC--CCCCCCeEEEEee------CChhhHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGT--AVGLKNWLRVTFA------VDPYSLEECLDRIKS  403 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~--~~~~~~~iRi~~~------~~~~~l~~~l~~l~~  403 (415)
                      ..++++|+.+....     ...+.+..++++.||.+.    |+.  .+..++++|+++.      .++++++++++.|.+
T Consensus       335 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~  409 (447)
T 3h7f_A          335 TDVHLVLVDLRDSP-----LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT  409 (447)
T ss_dssp             CSSSEEEEECTTSS-----CCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCC-----CCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence            56778888775321     134556667788899998    652  2334678999982      578999999999998


Q ss_pred             HHHH
Q 014936          404 FYQR  407 (415)
Q Consensus       404 ~~~~  407 (415)
                      ++.+
T Consensus       410 ~l~~  413 (447)
T 3h7f_A          410 ALAT  413 (447)
T ss_dssp             HHHS
T ss_pred             HHhc
Confidence            8754

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.96  E-value=4.9e-27  Score=228.18  Aligned_cols=349  Identities=13%  Similarity=0.056  Sum_probs=242.9

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE---EeCChH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF---VTSGCT  110 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~---i~~g~~  110 (415)
                      +++.+++..-.     ..++++.+.+++.+.+.... ..|....+..++++.+.+++++.+|.+..+++++   +|+|++
T Consensus        54 gnp~~~l~s~~-----t~~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggt  127 (502)
T 3hbx_A           54 GNPRLNLASFV-----TTWMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSS  127 (502)
T ss_dssp             CCGGGBTTCCS-----CCCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHH
T ss_pred             CCCCceecccc-----CCCCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHH
Confidence            55555554422     13457889999988876533 2344444567888888888888888665455554   599999


Q ss_pred             HHHHHHHHHhcCC--------CC-----EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          111 QAIDVAMALLSRP--------GA-----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       111 ~al~~~~~~l~~~--------gd-----~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      +++.+++.++.++        |+     .|+++.++|..+...++..|++++.+++++ +++.+|+++|++++++++++|
T Consensus       128 ea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~t~~v  206 (502)
T 3hbx_A          128 EAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDENTICV  206 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCTTEEEE
T ss_pred             HHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhhCCEEE
Confidence            9999998887654        76     999999999999999999999999999754 347799999999999999999


Q ss_pred             EecCCCCccccCCCHHHHHHHHHHHhhc------CcEEEEccccCCccc---CCCCcccccccCCCCCeEEEccCccccC
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAETANKL------KTLVIADEVYGHLVF---GDKPFVPMGVFGSTVPILTLGSLSKRWI  248 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~  248 (415)
                      ++++|+||||.+   .++++|.++|+++      |+++++|++|+++..   .+.....+.   ...-.++..+.+|. +
T Consensus       207 ~~~~~~n~tG~~---~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~---~~~~D~v~~s~hK~-l  279 (502)
T 3hbx_A          207 AAILGSTLNGEF---EDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR---LPLVKSINVSGHKY-G  279 (502)
T ss_dssp             EEEBSCTTTCCB---CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---STTEEEEEEETTTT-T
T ss_pred             EEecCCCCCCcc---cCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC---CCCceEEEECcccc-c
Confidence            999999999999   5577778888888      999999999987642   222111111   11113666788997 6


Q ss_pred             CCCceEEEEEeeCCCCCCChHHHHHHHHhhcc----------ccCCc---hhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936          249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD----------ILGDP---ATFIQAAVPSILQQPDEVFFKKTLNLLKQS  315 (415)
Q Consensus       249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  315 (415)
                      .++.++||+++.++..+.      +.+.....          ...+.   ....+.++...+.   .+.+.++.++..++
T Consensus       280 ~~p~g~G~~~~~~~~~l~------~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg---~~g~~~~~~~~~~~  350 (502)
T 3hbx_A          280 LVYAGIGWVIWRNKEDLP------EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG---HEGYRNVMENCREN  350 (502)
T ss_dssp             CCCSSCEEEEESSGGGSC------GGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEEeCHHHhh------HHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence            677789999886533111      11110000          00111   2333444444443   35678888999999


Q ss_pred             HHHHHHHhhcCCCCcCCCCC-CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEEEEee--C
Q 014936          316 VDICYNKIKEIPCISCPHKP-EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG---LKNWLRVTFA--V  389 (415)
Q Consensus       316 ~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~~--~  389 (415)
                      ++++.+.|+++++++++ .+ ....++.++++...  + .+..++...| .+.||.+.....+.   ...++||+++  +
T Consensus       351 a~~l~~~L~~~~~~~~~-~~~~~~~~v~f~~~~~~--~-~~~~~l~~~L-~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~  425 (502)
T 3hbx_A          351 MIVLREGLEKTERFNIV-SKDEGVPLVAFSLKDSS--C-HTEFEISDML-RRYGWIVPAYTMPPNAQHITVLRVVIREDF  425 (502)
T ss_dssp             HHHHHHHHHTTTCEEEC-SCSSSSSEEEEEESSCS--S-CCHHHHHHHH-HTTTCBCCEEECCTTCTTCEEEEEECCTTC
T ss_pred             HHHHHHHHHhCCCEEEE-eCCCCceEEEEEecCCC--c-CCHHHHHHHH-HhCCcEEeeccCCcccCCceEEEEEeCCCC
Confidence            99999999999778844 44 45567777775321  1 1344666665 56799864332221   2368999994  6


Q ss_pred             ChhhHHHHHHHHHHHHHHHHH
Q 014936          390 DPYSLEECLDRIKSFYQRHAK  410 (415)
Q Consensus       390 ~~~~l~~~l~~l~~~~~~~~~  410 (415)
                      +.++++.+++.|+++++++.+
T Consensus       426 t~edid~li~~L~~~l~~l~~  446 (502)
T 3hbx_A          426 SRTLAERLVIDIEKVMRELDE  446 (502)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHHHHh
Confidence            889999999999999887654

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.96  E-value=7e-28  Score=228.19  Aligned_cols=324  Identities=14%  Similarity=0.070  Sum_probs=214.1

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCC-CCcHHHHHHHHHHHhhhCCCCCCCCcEEE-eCChH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TSGCT  110 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~i-~~g~~  110 (415)
                      +.+++|+.|.      .++++.+++++.+....  +....|+.. ....++|+.+++++    |.. .+++|++ |+|++
T Consensus        39 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~-~~~~i~~~t~g~t  107 (398)
T 2fyf_A           39 PRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELF----SLP-DGYEVILGNGGAT  107 (398)
T ss_dssp             CSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHT----TCC-TTCEEEEEETCHH
T ss_pred             cCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEeCCchh
Confidence            3456666553      45678898888763111  111122221 12345555555555    432 3468998 99999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHHhC--CCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccc
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPI-YELSAAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG  187 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG  187 (415)
                      +++.+++.++.++| .+++..+.|.. ....+...  |.+++.++.+  +++..+.     .+++++++|++++|+||||
T Consensus       108 ~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG  179 (398)
T 2fyf_A          108 AFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTG  179 (398)
T ss_dssp             HHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTT
T ss_pred             HHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcc
Confidence            99999999998887 23333333321 12245555  7888888875  2332332     2566789999999999999


Q ss_pred             cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCC
Q 014936          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR  267 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~  267 (415)
                      .+++.+++.++      +|+++|+|++|+.+...    ..+..     ..+++.|+||+++++| ++||+++++      
T Consensus       180 ~~~~~~~i~~~------~~~~vivD~a~~~~~~~----~~~~~-----~di~~~s~sK~~~~~g-g~g~l~~~~------  237 (398)
T 2fyf_A          180 VAVAVRRPEGS------DDALVVIDATSGAGGLP----VDIAE-----TDAYYFAPQKNFASDG-GLWLAIMSP------  237 (398)
T ss_dssp             EECCCCCCTTC------C-CEEEEECTTTTTTSC----CCGGG-----CSEEEECTTSTTCSCS-SEEEEEECH------
T ss_pred             eecchHHhhhh------cCCeEEEEeccccCCcc----cCccc-----CcEEEEecCcccCCCC-ceEEEEECH------
Confidence            99998877765      79999999999875421    12211     2378889999988875 599999865      


Q ss_pred             hHHHHHHHHhh----------------------ccccCCchhHHHHHHHHhhCCCcHHH-HHHHHHHHHHHHHHHHHHhh
Q 014936          268 KPKVVERMKKY----------------------FDILGDPATFIQAAVPSILQQPDEVF-FKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       268 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~  324 (415)
                        ++++.++..                      .....+++...+.++..+|+...+.. +++..++++++++++.+.|+
T Consensus       238 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~  315 (398)
T 2fyf_A          238 --AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQ  315 (398)
T ss_dssp             --HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence              566655321                      01124566666777777775322222 78888999999999999999


Q ss_pred             cCCCCcCCC-CC--CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHH
Q 014936          325 EIPCISCPH-KP--EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLD  399 (415)
Q Consensus       325 ~~~~~~~~~-~p--~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~  399 (415)
                      ++|++.++. .|  .++.++|++++..     .+..++...+.+ +||.+.+|......+++||+++  +++++++.+++
T Consensus       316 ~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~-~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~  389 (398)
T 2fyf_A          316 ERPYTTPFVTDPGLRSQVVGTIDFVDD-----VDAGTVAKILRA-NGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTE  389 (398)
T ss_dssp             HSTTEEESCCSGGGBCSSEEEEEECTT-----SCHHHHHHHHHH-TTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHH
T ss_pred             HcCCceeccCChhhcCCcEEEEECCCC-----CCHHHHHHHHHH-CCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHH
Confidence            887877331 14  2344888888531     246677777654 5999988732222579999996  58999999999


Q ss_pred             HHHHHHHH
Q 014936          400 RIKSFYQR  407 (415)
Q Consensus       400 ~l~~~~~~  407 (415)
                      +|++++++
T Consensus       390 ~l~~~l~~  397 (398)
T 2fyf_A          390 CVDWVVER  397 (398)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99988653

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.96  E-value=4.5e-27  Score=223.06  Aligned_cols=294  Identities=15%  Similarity=0.082  Sum_probs=202.9

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~  147 (415)
                      +|++ +...+|++.+|++++        .+..+++++|++|+..++.+++++||+|+++.|+|+++..    .+...|++
T Consensus        78 r~~~-p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~  148 (430)
T 3ri6_A           78 RSSN-PTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIE  148 (430)
T ss_dssp             --CC-HHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCE
T ss_pred             CCCC-HHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence            4444 467889999999882        3456777788899999999999999999999999998777    66788999


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      +..++.+       |++++++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|+...+.    .+
T Consensus       149 ~~~v~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~----~~  214 (430)
T 3ri6_A          149 VRFVDVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL----EA  214 (430)
T ss_dssp             EEEECTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----CG
T ss_pred             EEEeCCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----Ch
Confidence            9988752       899999999999999999999999999975   678888899999999999999864431    11


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceEEEEEee-CCCCCC------------ChHHHHHHHHhh--ccccCCchhHHHHH
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT-DPCGMF------------RKPKVVERMKKY--FDILGDPATFIQAA  292 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~~~~~a  292 (415)
                       ..++.   .+++.|+||.++.+|..+|.+++. +...+.            +...+++..+..  .......++.....
T Consensus       215 -~~~g~---div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l  290 (430)
T 3ri6_A          215 -KRLGV---DIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYL  290 (430)
T ss_dssp             -GGGTC---SEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHH
T ss_pred             -HHcCC---EEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHH
Confidence             12222   388999999988877666666552 221110            001122333221  12233445544444


Q ss_pred             HHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCH
Q 014936          293 VPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDD  356 (415)
Q Consensus       293 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~  356 (415)
                      +...+     +.+..+.++..+++..+.+.|++.|++..+.+|.                +|+.+|++++..     .+.
T Consensus       291 ~l~~l-----~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~-----~~~  360 (430)
T 3ri6_A          291 QSLGL-----ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK-----EAS  360 (430)
T ss_dssp             HHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH-----HHH
T ss_pred             HHhhh-----hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH-----HHH
Confidence            44434     3466677888899999999999888877555565                454888888621     123


Q ss_pred             HHHHHHHHhhcCeEEEcCCCCC-----------------------CCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          357 IDFCFKLAKEESVIILPGTAVG-----------------------LKNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       357 ~~~~~~ll~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                      .+++..+ +..++.+++|..+.                       .+++||+|++.  |+.+.+++.|++++
T Consensus       361 ~~~~~~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~al  429 (430)
T 3ri6_A          361 YRFMDAL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQAL  429 (430)
T ss_dssp             HHHHHHC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred             HHHHHhC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence            3444433 45566777777554                       15789999985  34455555555543

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.96  E-value=2e-27  Score=224.15  Aligned_cols=282  Identities=15%  Similarity=0.112  Sum_probs=195.7

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHHhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~  152 (415)
                      ....++|+.+|++++      .  ++.++++++++++++++. +.++||+|+++.|+|++...    .++..|+++..++
T Consensus        55 ~~~~~lr~~la~~~g------~--~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~  125 (393)
T 1n8p_A           55 PNRENLERAVAALEN------A--QYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN  125 (393)
T ss_dssp             HHHHHHHHHHHHHTT------C--SEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred             hhHHHHHHHHHHHhC------C--CcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence            457899999999983      2  256666667999999999 88999999999999986544    3466788988887


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc----CcEEEEccccCCcccCCCCcccc
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL----KTLVIADEVYGHLVFGDKPFVPM  228 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~De~~~~~~~~~~~~~~~  228 (415)
                      .+       | +++++++++++++|++++|+||||.+++   +++|+++|+++    |+++|+|++|+.+.+.  .   .
T Consensus       126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~---~  189 (393)
T 1n8p_A          126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--N---P  189 (393)
T ss_dssp             SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--C---G
T ss_pred             CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--C---H
Confidence            52       6 8899999888999999999999999986   78888889999    9999999999987653  1   1


Q ss_pred             cccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          229 GVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       229 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      ..++   ..+++.|+||.++.+|+|+ ||+++++       +++++.+..... .....++....++...++.     +.
T Consensus       190 ~~~~---~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----~~  254 (393)
T 1n8p_A          190 LNFG---ADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LH  254 (393)
T ss_dssp             GGGT---CSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HH
T ss_pred             HHcC---CeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-----HH
Confidence            2232   3488999999999999999 9988743       256777665532 2344566666666666654     45


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCC-CcCCCCC---------------C--C-ceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936          307 KTLNLLKQSVDICYNKIKEIPC-ISCPHKP---------------E--G-SMAVMLKLNLSLLDDIIDDIDFCFKLAKEE  367 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p---------------~--~-g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~  367 (415)
                      .+.++..+++..+.+.|++.+. +..+..|               .  . +.++++.++...    .+...++.. ++..
T Consensus       255 ~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----~~~~~~l~~-l~~~  329 (393)
T 1n8p_A          255 LRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA----EAASKFASS-TRLF  329 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH----HHHHHHHHH-CSSS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH----HHHHHHHhh-CCcc
Confidence            5566667777777777776644 2211112               1  2 567787775310    012333333 3334


Q ss_pred             CeEEEcCCCC----------------------CC-CCeEEEEeeC--ChhhHHHHHHHHHH
Q 014936          368 SVIILPGTAV----------------------GL-KNWLRVTFAV--DPYSLEECLDRIKS  403 (415)
Q Consensus       368 gi~v~~g~~~----------------------~~-~~~iRi~~~~--~~~~l~~~l~~l~~  403 (415)
                      ++.++.|+.|                      +. ++.||+|++.  ++++++.+.+.|++
T Consensus       330 ~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~  390 (393)
T 1n8p_A          330 TLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQ  390 (393)
T ss_dssp             EECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             eECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence            5555444321                      11 4789999974  45566666665554

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.96  E-value=1.3e-26  Score=219.25  Aligned_cols=287  Identities=13%  Similarity=0.109  Sum_probs=195.6

Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH  145 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g  145 (415)
                      +.+|++ .+..++|+.+|++++      .. +.+++++| ++++..++. +.++||+|+++.|+|++....    ++..|
T Consensus        61 y~r~~~-p~~~~l~~~la~~~g------~~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G  130 (403)
T 3cog_A           61 YSRSGN-PTRNCLEKAVAALDG------AK-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFG  130 (403)
T ss_dssp             -----C-HHHHHHHHHHHHHHT------CS-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGT
T ss_pred             ccCCCC-chHHHHHHHHHHHhC------CC-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcC
Confidence            345655 467899999999983      22 45555554 699999998 889999999999999975543    35679


Q ss_pred             CeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC-cEEEEccccCCcccCCCC
Q 014936          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKP  224 (415)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~  224 (415)
                      +++..++.+       |++++++++++++++|++++|+||||.+++   +++|+++|+++| +++|+|++|..+.+.   
T Consensus       131 ~~v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~---  197 (403)
T 3cog_A          131 LKISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ---  197 (403)
T ss_dssp             CEEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC---
T ss_pred             CEEEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC---
Confidence            999888752       789999999989999999999999999986   888899999999 999999999986542   


Q ss_pred             cccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcH
Q 014936          225 FVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDE  302 (415)
Q Consensus       225 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~  302 (415)
                       .++. +   +..+++.|+||.++.+| .|+||+++++       +++.+.++.... .+...++..+.++...++.   
T Consensus       198 -~~~~-~---~~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---  262 (403)
T 3cog_A          198 -RPLA-L---GADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT---  262 (403)
T ss_dssp             -CTTT-T---TCSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---
T ss_pred             -Cccc-c---CCeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---
Confidence             1221 2   24589999999988766 5799999854       257777765533 3455678888888888865   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcC--------------CCCcCCCCC----CCceEEEEecCccccCCCCCHHHHHHHHH
Q 014936          303 VFFKKTLNLLKQSVDICYNKIKEI--------------PCISCPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLA  364 (415)
Q Consensus       303 ~~~~~~~~~~~~~~~~l~~~l~~~--------------~~~~~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll  364 (415)
                        +..+.++..++...+.+.+++.              |++.+. .+    .++++. +.++.       .. +....++
T Consensus       263 --l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~~~~~~~g~~~~-~~l~~-------~~-~~~~~~l  330 (403)
T 3cog_A          263 --LHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELV-KRQCTGCTGMVT-FYIKG-------TL-QHAEIFL  330 (403)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-HHHCSCCCSEEE-EEESS-------CH-HHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHH-HhcCCCCceEEE-EEecC-------CH-HHHHHHH
Confidence              3334444455555555555433              333211 11    244444 45642       22 3345566


Q ss_pred             hhcCeEEEc---CC----------CC------------CC-CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          365 KEESVIILP---GT----------AV------------GL-KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       365 ~~~gi~v~~---g~----------~~------------~~-~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .+.||.+..   |.          .+            +. +++||+|++.  ++.++.+++|.+++++.
T Consensus       331 ~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~d~i~~l~~al~~~  398 (403)
T 3cog_A          331 KNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGL--EDEEDLLEDLDQALKAA  398 (403)
T ss_dssp             HHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHH
T ss_pred             HhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHHHh
Confidence            777885432   21          11            22 5799999976  34455666666666543

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.95  E-value=2e-26  Score=217.82  Aligned_cols=311  Identities=13%  Similarity=0.135  Sum_probs=214.5

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCC--cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEc
Q 014936           54 THVATEAVAEALLSEKFNGYAPTAG--LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLP  130 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~~~y~~~~g--~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~  130 (415)
                      ++++++++.+.+..    .|.++.|  ..++|+++|++++        .+++++++|+++++.+++.++ .++||+|+++
T Consensus        11 ~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~   78 (394)
T 1o69_A           11 GGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLAS   78 (394)
T ss_dssp             -CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred             CHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEEC
Confidence            46678888888764    2555457  8999999999983        379999999999999999999 8999999999


Q ss_pred             CCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC---CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCc
Q 014936          131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT  207 (415)
Q Consensus       131 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~  207 (415)
                      .|+|+++...++..|++++.++.+  .++.+|++++++.+++   ++++|++++   |+|..   .++++|.++|+++|+
T Consensus        79 ~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~l~~~~~~  150 (394)
T 1o69_A           79 SFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVEICKENDI  150 (394)
T ss_dssp             SSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHHHHHHTTC
T ss_pred             CCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHHHHHHcCC
Confidence            999999999999999999999875  4567899999998876   688888875   78966   678889999999999


Q ss_pred             EEEEccccC-CcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccC-C-
Q 014936          208 LVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-D-  284 (415)
Q Consensus       208 ~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-  284 (415)
                      ++|+|++|+ ++.+.+....   .+..    +.+.|+||..+++|.|+||+++++       +++++.++....... . 
T Consensus       151 ~li~Dea~~~g~~~~~~~~~---~~~~----~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~  216 (394)
T 1o69_A          151 VLIEDAAEALGSFYKNKALG---TFGE----FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYSTQARENC  216 (394)
T ss_dssp             EEEEECTTCTTCEETTEETT---SSSS----EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTBTCCCSS
T ss_pred             EEEEECcCcccceeCCcccc---cccC----cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHHhccccC
Confidence            999999999 4444432211   1111    445556444345677899999953       256777765422110 0 


Q ss_pred             -------------chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----Cce-EEEEecC
Q 014936          285 -------------PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GSM-AVMLKLN  346 (415)
Q Consensus       285 -------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~-~~~~~l~  346 (415)
                                   .++....++...++     ++++..++++++++++.+.|+++  +... .+.    .++ ++++.++
T Consensus       217 ~~~~~~~~g~~~~~~~~~aa~~l~~l~-----~l~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~~i~~~  288 (394)
T 1o69_A          217 LHYEHLDYGYNYRLSNVLGAIGVAQME-----VLEQRVLKKREIYEWYKEFLGEY--FSFL-DELENSRSNRWLSTALIN  288 (394)
T ss_dssp             SSCCCSSCCCBCBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHTTT--EECC-CCCTTEECCCSSEEEEES
T ss_pred             ccccccccCcccCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccc--cccc-CCCCCCcceeEEEEEEec
Confidence                         22233333222343     36677888899999999999876  4422 221    232 3566665


Q ss_pred             ccc--------------cCC--CCCHHHHHHHHHhhcCeEEEcCCCCC--C---C---------------CeEEEEe--e
Q 014936          347 LSL--------------LDD--IIDDIDFCFKLAKEESVIILPGTAVG--L---K---------------NWLRVTF--A  388 (415)
Q Consensus       347 ~~~--------------~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~--~---~---------------~~iRi~~--~  388 (415)
                      ...              .+.  ..+..++...| .++||.+++|..+.  .   .               ..+|+.+  .
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (394)
T 1o69_A          289 FDKNELNACQKDINISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTA  367 (394)
T ss_dssp             CCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTT
T ss_pred             chhhccccccccccccccccccccCHHHHHHHH-HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCC
Confidence            210              000  00234555554 66799999885331  0   1               2344444  3


Q ss_pred             CChhhHHHHHHHHHHHHHH
Q 014936          389 VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       389 ~~~~~l~~~l~~l~~~~~~  407 (415)
                      .+++|++.+++.|+++++.
T Consensus       368 ~t~edi~~~~~~l~~~~~~  386 (394)
T 1o69_A          368 MSKDDVYEISKLILKSIKA  386 (394)
T ss_dssp             CCHHHHHHHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHHHHHHHhc
Confidence            6899999999999887653

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.95  E-value=2.2e-27  Score=225.29  Aligned_cols=332  Identities=13%  Similarity=0.112  Sum_probs=222.2

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHH----HHHHHHHhhhCCCCCCCCcEE
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY------APTAGLPLTR----RAIAEYLSRDLPYKLTPNDVF  104 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr----~~ia~~~~~~~~~~~~~~~i~  104 (415)
                      +.+++++.++|       .++.+++++.+.+.......|      +......+++    +.+++++      +.+++.++
T Consensus        24 ~~~~~~~~~~~-------~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~------g~~~~~i~   90 (405)
T 2vi8_A           24 AKIELIASENF-------VSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF------GAEHANVQ   90 (405)
T ss_dssp             HSEECCTTCCC-------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH------TCSEEECC
T ss_pred             cceeeccCccc-------CCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh------CCCceEEE
Confidence            45667655542       278999999888752211122      1111234555    4666666      23433444


Q ss_pred             EeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH-H--HHhCC--CeEEEeeccCCCCCCCChhHHHhhcCC-CceEEE
Q 014936          105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL-S--AAFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALV  178 (415)
Q Consensus       105 i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~  178 (415)
                      +++| ++++..++.++.++||+|+++.|+|+.+.. .  +...|  .++..+++++ .++.+|++++++.+++ ++++++
T Consensus        91 ~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~  168 (405)
T 2vi8_A           91 PHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIV  168 (405)
T ss_dssp             CSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEE
T ss_pred             ecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEEE
Confidence            4555 999999999999999999999999987753 1  12233  3666666543 3567899999998875 677766


Q ss_pred             ecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccC-CCCceEEEE
Q 014936          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWF  257 (415)
Q Consensus       179 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~  257 (415)
                      + +|+|. |..   .++++|.++|+++|+++|+||+|+.+..... ... ..+..  ..++++|+||+++ +.|   ||+
T Consensus       169 ~-~~~~~-~~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-~~~-~~~~~--~di~~~s~sK~~~g~~g---G~~  236 (405)
T 2vi8_A          169 A-AAAAY-PRI---IDFAKFREIADEVGAYLMVDMAHIAGLVAAG-LHP-NPVPY--AHFVTTTTHKTLRGPRG---GMI  236 (405)
T ss_dssp             E-CCSSC-CSC---CCHHHHHHHHHHHTCEEEEECTTTHHHHHTT-SSC-CSTTT--CSEEEEESSSTTCCCSC---EEE
T ss_pred             E-eCCCC-Ccc---CCHHHHHHHHHHcCCEEEEEccccccccccC-cCC-Ccccc--CCEEEEeccccCCCCCC---eEE
Confidence            6 55553 344   3478999999999999999999995432211 111 11111  1288899999986 555   999


Q ss_pred             EeeCCCCCCChHHHHHHHHhhc-ccc-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          258 VTTDPCGMFRKPKVVERMKKYF-DIL-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ++++        ++++.++... ... +++++....++.++++.....++++..++++++++++.+.|+++ ++.++ .|
T Consensus       237 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~  306 (405)
T 2vi8_A          237 LCQE--------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV-SG  306 (405)
T ss_dssp             EECH--------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG-GG
T ss_pred             EEcH--------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cC
Confidence            9864        5777776543 222 23345555555555543222577889999999999999999988 77733 44


Q ss_pred             -CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC----CC--CCCeEEEEee------CChhhHHHHHHHHH
Q 014936          336 -EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA----VG--LKNWLRVTFA------VDPYSLEECLDRIK  402 (415)
Q Consensus       336 -~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~----~~--~~~~iRi~~~------~~~~~l~~~l~~l~  402 (415)
                       ..++++|+.++...    .+..++...+ .++||.+.+|..    ++  .++++|++++      .++++++.++++|+
T Consensus       307 ~~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~  381 (405)
T 2vi8_A          307 GTDNHLLLVDLRPQQ----LTGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIG  381 (405)
T ss_dssp             SCSSSEEEEECGGGT----CCHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred             CCCceEEEEEccCCC----CCHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHH
Confidence             46889999886321    1355555554 678999999863    22  2578999996      37999999999999


Q ss_pred             HHHHHH
Q 014936          403 SFYQRH  408 (415)
Q Consensus       403 ~~~~~~  408 (415)
                      +++++.
T Consensus       382 ~~~~~~  387 (405)
T 2vi8_A          382 LVLKNV  387 (405)
T ss_dssp             HHHTCT
T ss_pred             HHHhcc
Confidence            987653

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.95  E-value=1.1e-26  Score=217.65  Aligned_cols=314  Identities=13%  Similarity=0.137  Sum_probs=218.5

Q ss_pred             CCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHH-HHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEE
Q 014936           50 CFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAI-AEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANI  127 (415)
Q Consensus        50 ~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~i-a~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~v  127 (415)
                      ++++++.+++++.+.+..+.+..|++  ...++++++ |++++       ..+++++++|+++++.+++.++ .++||+|
T Consensus        11 ~~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~Gd~V   81 (377)
T 3ju7_A           11 STVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKGKYA   81 (377)
T ss_dssp             CCCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTCCEE
T ss_pred             CCCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence            47888999999999988755432343  468999999 99972       2678999999999999999998 8999999


Q ss_pred             EEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCC--ceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQN--TVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       128 i~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +++.|+|..+...+...|++++.+++++ +++.+|++++++++ +++  +++|+   |+||+|...+   +++|.++|+ 
T Consensus        82 i~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~-  153 (377)
T 3ju7_A           82 LMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK-  153 (377)
T ss_dssp             EEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH-
T ss_pred             EECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh-
Confidence            9999999999999999999999999864 46789999999988 556  77766   6778999855   677788888 


Q ss_pred             cCcEEEEccccCCccc-CCCCcccc-cccCCCCCeEEEccC--ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcc
Q 014936          205 LKTLVIADEVYGHLVF-GDKPFVPM-GVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD  280 (415)
Q Consensus       205 ~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~  280 (415)
                      +|+++|+|++|+.+.. .+.   .+ ..+.  +  +.+.||  +|.++. | +.|++++++       +++.+.++....
T Consensus       154 ~~~~vi~D~a~a~g~~~~~~---~~g~~~~--d--~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~~  217 (377)
T 3ju7_A          154 KGVPVVVDAAPGFGLMNGGM---HYGQDFS--G--MIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMGN  217 (377)
T ss_dssp             TTCCBEEECTTCTTCEETTE---ETTTTCS--S--EEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHTB
T ss_pred             cCCEEEEECCCccCCeECCE---eccCCCC--c--EEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHHh
Confidence            9999999999987542 211   11 1111  1  444554  698764 4 578887755       357777665533


Q ss_pred             c-------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCc-----eEEE
Q 014936          281 I-------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGS-----MAVM  342 (415)
Q Consensus       281 ~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g-----~~~~  342 (415)
                      .             ....+.+....+...++     .++...++.+++++.+.+.|++++++.....+..+     .|+.
T Consensus       218 ~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-----~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~  292 (377)
T 3ju7_A          218 FGFDTNRECTMMGFNCKMSEYAAAIGIATMK-----KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMP  292 (377)
T ss_dssp             TTBCTTSCBCSSCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEE
T ss_pred             cCCCCCCceeeccccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEE
Confidence            1             23345555444544553     36677778888888888888887654212123222     1334


Q ss_pred             EecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC--CCC-------------------CCeEEEEee--CChhhHHHHHH
Q 014936          343 LKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA--VGL-------------------KNWLRVTFA--VDPYSLEECLD  399 (415)
Q Consensus       343 ~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--~~~-------------------~~~iRi~~~--~~~~~l~~~l~  399 (415)
                      +.++..     .+..++...| +++||.+..+..  +..                   .+.+|+.+.  .++++++..++
T Consensus       293 ~~~~~~-----~~~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~  366 (377)
T 3ju7_A          293 ILCPEE-----VRNKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVI  366 (377)
T ss_dssp             EECCTT-----SCHHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHH
T ss_pred             EEeCCh-----hhHHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHH
Confidence            444421     1245555554 677999877652  110                   246999984  68999999999


Q ss_pred             HHHHHHHH
Q 014936          400 RIKSFYQR  407 (415)
Q Consensus       400 ~l~~~~~~  407 (415)
                      .|++++..
T Consensus       367 ~l~~~~~~  374 (377)
T 3ju7_A          367 CLGQKVVS  374 (377)
T ss_dssp             HHTC----
T ss_pred             HHHHHHhc
Confidence            99887754

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.95  E-value=6.4e-26  Score=221.08  Aligned_cols=328  Identities=11%  Similarity=0.048  Sum_probs=226.8

Q ss_pred             HHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CC-----C
Q 014936           59 EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--------PG-----A  125 (415)
Q Consensus        59 ~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~--------~g-----d  125 (415)
                      +.+...+.... ..|....+..++++.+.+++.+.+|.+.+++++++|+|+|+++..++.++..        +|     +
T Consensus       111 ~~l~~~~n~~~-~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~  189 (504)
T 2okj_A          111 EWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK  189 (504)
T ss_dssp             HHHHHHHCCBS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred             HHHHHhhccCC-CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence            44444444332 3565545667788888888887777554478999999999999999988753        56     6


Q ss_pred             -EEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHHHH
Q 014936          126 -NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHL  195 (415)
Q Consensus       126 -~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l  195 (415)
                       .|+++.++|+++...++..|.   +++.++.+  .++.+|+++|++++++      ++++|++++|+||||.+   +++
T Consensus       190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i---~~l  264 (504)
T 2okj_A          190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---DPI  264 (504)
T ss_dssp             EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB---CCH
T ss_pred             eEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc---CCH
Confidence             799999999999999988877   78888874  3577999999998865      57889999999999999   568


Q ss_pred             HHHHHHHhhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          196 QKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       196 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      ++|+++|+++|+++++|++|+.+.+..... ..+..+..  ..+++.+++|+++.| .++|+++++++.       +.+.
T Consensus       265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~--~D~i~~~~hK~~~~p-~~~g~l~~~~~~-------~~~~  334 (504)
T 2okj_A          265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER--ANSVTWNPHKMMGVL-LQCSAILVKEKG-------ILQG  334 (504)
T ss_dssp             HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG--CSEEEECTTSTTCCC-SCCEEEEESSTT-------HHHH
T ss_pred             HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCccc--CCEEEECchhhcCCC-cceEEEEEECHH-------HHHH
Confidence            889999999999999999999877543222 12222211  126677899997655 689999997632       3332


Q ss_pred             HH-hhc-ccc-C-------------------CchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          275 MK-KYF-DIL-G-------------------DPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       275 ~~-~~~-~~~-~-------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      .. ... ... .                   ....+.+.++..++.   .+.+++..++..++++++.+.|+++|+++++
T Consensus       335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  411 (504)
T 2okj_A          335 CNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFEMV  411 (504)
T ss_dssp             HHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEEES
T ss_pred             HhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            11 110 000 0                   012455555555554   3678888999999999999999998888854


Q ss_pred             C--CCCCceEEEEecCccccCCCC-----------CHHHHHHHHHhhcCe-EEEcCCCCCCCCeEEEEee---CChhhHH
Q 014936          333 H--KPEGSMAVMLKLNLSLLDDII-----------DDIDFCFKLAKEESV-IILPGTAVGLKNWLRVTFA---VDPYSLE  395 (415)
Q Consensus       333 ~--~p~~g~~~~~~l~~~~~~~~~-----------~~~~~~~~ll~~~gi-~v~~g~~~~~~~~iRi~~~---~~~~~l~  395 (415)
                      .  .|..+++++...+... .+..           ...++...+. +.|+ .+.++...+..+++|++++   +++++++
T Consensus       412 ~~~~p~~~~v~f~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~  489 (504)
T 2okj_A          412 FNGEPEHTNVCFWYIPQSL-RGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDID  489 (504)
T ss_dssp             SSSCCSSSCEEEEECCGGG-SSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHH
T ss_pred             ecCCCCeEEEEEEEeCccc-cccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHH
Confidence            3  3666776664444210 0000           0234555554 4575 4443322122368999996   6889999


Q ss_pred             HHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQR  407 (415)
Q Consensus       396 ~~l~~l~~~~~~  407 (415)
                      .++++|++++++
T Consensus       490 ~~~~~l~~~~~~  501 (504)
T 2okj_A          490 FLIEEIERLGQD  501 (504)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHH
Confidence            999999988754

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.95  E-value=1.1e-26  Score=225.97  Aligned_cols=334  Identities=14%  Similarity=0.133  Sum_probs=226.4

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh----c------
Q 014936           52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL----S------  121 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l----~------  121 (415)
                      +.++.+.+++.....+.....|.......++++.+.+++.+.+|.+ ..+.+++|+|+++++..++.++    .      
T Consensus       111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~  189 (497)
T 2qma_A          111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH  189 (497)
T ss_dssp             CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence            3467777777655444333355544466788888888888777753 2379999999999999998873    2      


Q ss_pred             ---CC------CC-EEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCCC----c--eEEEecCC
Q 014936          122 ---RP------GA-NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN----T--VALVIINP  182 (415)
Q Consensus       122 ---~~------gd-~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~----~--~~v~i~~p  182 (415)
                         .+      |+ .|+++.++|+++...+...|.   +++.++++  .++.+|+++|+++++++    +  .+|+++++
T Consensus       190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~  267 (497)
T 2qma_A          190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG  267 (497)
T ss_dssp             CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred             chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence               12      46 899999999999999888876   78888875  35779999999988653    3  37888899


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  262 (415)
                      +||||.+   +++++|+++|+++|+++++|++|+.+.+.......+..+..  ..+++.|+||+++.| .++|+++++++
T Consensus       268 ~~~tG~~---~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~--~D~i~~s~hK~l~~p-~~~G~l~~~~~  341 (497)
T 2qma_A          268 TTDHGAI---DDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVER--AHSISVDFHKLFYQT-ISCGALLVNDK  341 (497)
T ss_dssp             CTTTCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGG--CSEEEEETTTTTCCC-SSCEEEEESCG
T ss_pred             CCCCCCC---CCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCccc--CCEEEEcchhccCCC-cceEEEEEeCH
Confidence            9999998   66889999999999999999999987754321111222211  126677899986665 68999998764


Q ss_pred             CCCCChHHHHHHHHh---hccccC--Cc-------------hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936          263 CGMFRKPKVVERMKK---YFDILG--DP-------------ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       263 ~~~~~~~~~~~~~~~---~~~~~~--~~-------------~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      ..       .+.+..   +.....  .+             ..+.+.++...+   ..+.++++.+++.++++++.+.|+
T Consensus       342 ~~-------~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l---g~~g~~~~~~~~~~~a~~l~~~L~  411 (497)
T 2qma_A          342 SN-------FKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV---GPKALGDMYDHLLAQTLEVADMIR  411 (497)
T ss_dssp             GG-------GGGGCC--------------------CCSCCCTHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HH-------HHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHh
Confidence            31       111110   000000  01             122333334444   347788899999999999999999


Q ss_pred             cCCCCcCCCCCCCceEEEEecCccccCCCC-CHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe---eCChhhHHHHHHH
Q 014936          325 EIPCISCPHKPEGSMAVMLKLNLSLLDDII-DDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF---AVDPYSLEECLDR  400 (415)
Q Consensus       325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~-~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~---~~~~~~l~~~l~~  400 (415)
                      ++++++++..|.. .++++++..... ... ...++...+ .+.|+.+.++..+...+++|+++   .+++++++.+++.
T Consensus       412 ~~~~~~~~~~~~~-~~v~f~~~~~~~-~~~~l~~~l~~~l-~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~  488 (497)
T 2qma_A          412 TNDQFELLAEPSL-STVLFRATHETA-DLDELNKALRLEA-LTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSK  488 (497)
T ss_dssp             TCTTEEECSCCSS-SEEEEEECCSSS-CHHHHHHHHHHHH-HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHH
T ss_pred             hCCCeEEEcCCCc-eEEEEEEcCCcc-CHHHHHHHHHHHH-HhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHH
Confidence            9888884434544 466666643110 000 012344444 45688886655444457899998   3689999999999


Q ss_pred             HHHHHHH
Q 014936          401 IKSFYQR  407 (415)
Q Consensus       401 l~~~~~~  407 (415)
                      |++++++
T Consensus       489 l~~~~~~  495 (497)
T 2qma_A          489 INMLAVE  495 (497)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9988765

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.95  E-value=1.3e-26  Score=224.99  Aligned_cols=333  Identities=9%  Similarity=0.029  Sum_probs=230.9

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-------CCcEEEeCChHHHHHHHHHHhcCC---
Q 014936           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-------PNDVFVTSGCTQAIDVAMALLSRP---  123 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~i~~g~~~al~~~~~~l~~~---  123 (415)
                      +..+.+++...+... ...|....+..++++.+++++.+.+|.+..       ...+++|+|+|+++..++.++.++   
T Consensus        87 ~~~~~~~~~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~  165 (486)
T 1js3_A           87 PAMLADMLCGAIGCI-GFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR  165 (486)
T ss_dssp             HHHHHHHHHHHHCCC-CSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcC-ccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence            455777777776543 335665556789999999999988886532       357899999999999998776421   


Q ss_pred             ------CC--------E--EEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCc------eEEEecC
Q 014936          124 ------GA--------N--ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT------VALVIIN  181 (415)
Q Consensus       124 ------gd--------~--vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~v~i~~  181 (415)
                            ||        .  |+++.++|+++...++..|++++.++++  .++.+|+++|++++++++      .+|++++
T Consensus       166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~  243 (486)
T 1js3_A          166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATL  243 (486)
T ss_dssp             HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred             hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeC
Confidence                  42        3  7889999999999999999999999874  467899999999997655      3788999


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      |+||||.+   +++++|+++|+++|+++++|++|+.+.+....... +..+... . .+..++||+++.| +++|+++++
T Consensus       244 ~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~a-d-si~~~~hK~~~~p-~~~G~l~~~  317 (486)
T 1js3_A          244 GTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFA-D-SFNFNPHKWLLVN-FDCSAMWVK  317 (486)
T ss_dssp             SCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGC-S-EEEECHHHHSSCC-SSCEEEEES
T ss_pred             CCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcccc-C-eeEEchhhhcCCC-cceEEEEEe
Confidence            99999988   78999999999999999999999986643221111 1122111 2 4456889996655 889999997


Q ss_pred             CCCCCCChHHHHHHHHh---hc-c-----------------ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936          261 DPCGMFRKPKVVERMKK---YF-D-----------------ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~---~~-~-----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  319 (415)
                      ++.      .+.+.+..   +. .                 .+.....+.+.++...+.   .+.++++.++..++++++
T Consensus       318 ~~~------~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g---~~g~~~~~~~~~~~a~~l  388 (486)
T 1js3_A          318 RRT------DLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG---VKGLQAYIRKHVQLSHEF  388 (486)
T ss_dssp             CHH------HHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred             CHH------HHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHH
Confidence            621      01222110   00 0                 000123344555544442   367888999999999999


Q ss_pred             HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHH
Q 014936          320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEE  396 (415)
Q Consensus       320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~  396 (415)
                      .+.|+++|+++++..|..+. +.++++...    ....++...+.++ |+.+.++..+...+++|+++.   +++++++.
T Consensus       389 ~~~L~~~~~~~~~~~~~~~~-v~f~~~~~~----~~~~~l~~~L~~~-g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~  462 (486)
T 1js3_A          389 EAFVLQDPRFEVCAEVTLGL-VCFRLKGSD----GLNEALLERINSA-RKIHLVPCRLRGQFVLRFAICSRKVESGHVRL  462 (486)
T ss_dssp             HHHHHHCTTEEECSCCCSSE-EEEEESSCH----HHHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHHHHHH
T ss_pred             HHHHhcCCCeEEeCCCceeE-EEEEecChH----HHHHHHHHHHHhc-CCEEEEEEEECCEEEEEEEeCCCCCCHHHHHH
Confidence            99999988888543455444 444554210    0135566666544 654333333444579999983   47899999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRHAK  410 (415)
Q Consensus       397 ~l~~l~~~~~~~~~  410 (415)
                      ++++|+++++++.+
T Consensus       463 ~~~~l~~~~~~~~~  476 (486)
T 1js3_A          463 AWEHIRGLAAELLA  476 (486)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999877654

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.95  E-value=7.9e-26  Score=213.86  Aligned_cols=214  Identities=13%  Similarity=0.085  Sum_probs=160.2

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~  152 (415)
                      ....++|+.+|++++        .++.++++|+++++++++.+++++||+|+++.+.|++....+    +..|+++..++
T Consensus        82 p~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~  153 (415)
T 2fq6_A           82 LTHFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFD  153 (415)
T ss_dssp             HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             chHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEEC
Confidence            346789999999882        346778899999999999999999999999999999877554    45789988886


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccccc
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGV  230 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~  230 (415)
                      .       .|++++++++++++++|++.+|+||+|.+.+   +++|+++|++  +|+++|+|++|+.+...    .++ .
T Consensus       154 ~-------~d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~----~p~-~  218 (415)
T 2fq6_A          154 P-------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-D  218 (415)
T ss_dssp             T-------TCGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-G
T ss_pred             C-------CCHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC----Ccc-c
Confidence            4       2789999999999999999999999999975   7888888999  99999999999864321    122 2


Q ss_pred             cCCCCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936          231 FGSTVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKT  308 (415)
Q Consensus       231 ~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~  308 (415)
                      ++.   .+++.|+||.++.+|.+ +||+++++        ++++.++.... .....++....++...+     +.+..+
T Consensus       219 ~g~---Div~~S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~~~~~~l-----~~l~~r  282 (415)
T 2fq6_A          219 FGI---DVSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYITSRGL-----RTLGVR  282 (415)
T ss_dssp             GTC---SEEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHHHHHH-----HHHHHH
T ss_pred             cCC---eEEEEeCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhhh-----hHHHHH
Confidence            333   38899999999888765 58888765        24455544432 22334554444444444     335666


Q ss_pred             HHHHHHHHHHHHHHhhcCCCC
Q 014936          309 LNLLKQSVDICYNKIKEIPCI  329 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~~~~  329 (415)
                      .++..+++..+.+.|++.|.+
T Consensus       283 ~~~~~~n~~~l~~~L~~~~~v  303 (415)
T 2fq6_A          283 LRQHHESSLKVAEWLAEHPQV  303 (415)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTE
T ss_pred             HHHHHHHHHHHHHHHHcCCCe
Confidence            677777888888888776543

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.95  E-value=4.1e-26  Score=214.54  Aligned_cols=298  Identities=11%  Similarity=0.092  Sum_probs=207.4

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchH--HHHHhCC--CeEEEeeccCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--LSAAFRH--IEVRHFDLLPD  156 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~--~~~~~~g--~~~~~~~~~~~  156 (415)
                      ++.+.+++.+.+.+|  .+ +.+++++|+++++++++..+ ++||+|++..++|++..  ..++..|  .++..++.+..
T Consensus        35 ~~~~~~~~~l~~~~~--~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  110 (379)
T 3ke3_A           35 EVMNDLLSNLKTVYN--AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT  110 (379)
T ss_dssp             HHHHHHHHHHHHHHT--CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred             HHHHHHHHHHHHHhC--CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence            344444444444333  23 68899999999999988665 69999999999998753  3455555  46777765421


Q ss_pred             C------C-CCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc
Q 014936          157 K------G-WEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM  228 (415)
Q Consensus       157 ~------~-~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~  228 (415)
                      +      . ..+|+++++++++ ++++++++++++||+|.+++.+++++|+++|+++|+++|+|++++ +   + ....+
T Consensus       111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~~~  185 (379)
T 3ke3_A          111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWLDM  185 (379)
T ss_dssp             SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCCCH
T ss_pred             ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-ccccc
Confidence            1      1 1479999999885 478899999999999999999999999999999999999999986 2   1 22223


Q ss_pred             cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-----------------------cccCCc
Q 014936          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-----------------------DILGDP  285 (415)
Q Consensus       229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~  285 (415)
                      ..++.+   +++.|++|+++.+ ..+|++++++        ++++.+....                       .+.+++
T Consensus       186 ~~~~~d---~~~~s~~K~l~~~-~g~g~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~  253 (379)
T 3ke3_A          186 KELGID---VLISAPQKGWSST-PCAGLVMLSA--------AAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATM  253 (379)
T ss_dssp             HHHTCS---EEEECTTTTTCSC-CCEEEEEECH--------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCC
T ss_pred             cccCCC---EEEecchhhcCCC-CceEEEEECH--------HHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCC
Confidence            333332   7788999986443 3489998864        4555543210                       011366


Q ss_pred             hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC---CceEEEEecCccccCCCCCHHHHHHH
Q 014936          286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE---GSMAVMLKLNLSLLDDIIDDIDFCFK  362 (415)
Q Consensus       286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~~l~~~~~~~~~~~~~~~~~  362 (415)
                      ++..+.++.++|+...+..+++..++++++++++.+.|+++ ++.++ .+.   .+....+..+.       ....+ ..
T Consensus       254 ~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~-~~~~~~~~~i~~~~~~~-------~~~~~-~~  323 (379)
T 3ke3_A          254 PTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESV-AAEGFEAPGVVVSYTER-------DDMHK-GS  323 (379)
T ss_dssp             CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-BCTTCBCSSEEEEECSC-------HHHHS-SH
T ss_pred             CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEec-CCccccCceEEEEccCC-------cchHH-HH
Confidence            77777777777754333346788899999999999999988 77743 332   22223333321       11222 34


Q ss_pred             HHhhcCeEEEcCCCCCC-----CCeEEEEee--CChhhHHHHHHHHHHHHHHHH
Q 014936          363 LAKEESVIILPGTAVGL-----KNWLRVTFA--VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       363 ll~~~gi~v~~g~~~~~-----~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      .|.++||.+.+|..|..     .+.+||++.  +++++++.++++|+++++++.
T Consensus       324 ~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~  377 (379)
T 3ke3_A          324 AFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL  377 (379)
T ss_dssp             HHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence            45678999999986543     579999994  688999999999999988764

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.95  E-value=3e-25  Score=215.92  Aligned_cols=332  Identities=11%  Similarity=0.057  Sum_probs=230.4

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcC------------
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR------------  122 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~------------  122 (415)
                      ..+.+.+...+.... ..|....+..++++.+++|+.+.+|.+.+++.+++|+|+|+++..++.++.+            
T Consensus       110 ~~~~e~l~~~~~~~~-~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~  188 (511)
T 3vp6_A          110 GLAGEWLTSTANTNM-FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA  188 (511)
T ss_dssp             HHHHHHHHHHHCCCS-SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred             HHHHHHHHHHhccCC-CCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence            344566666665533 4777777889999999999999888776678999999999999998888754            


Q ss_pred             --CCCEEEEcCCCCcchHHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCCC------ceEEEecCCCCccccCCC
Q 014936          123 --PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYS  191 (415)
Q Consensus       123 --~gd~vi~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~~~  191 (415)
                        +++.|+++.++|+++...++..|+   ++..++++  .++.+|+++|++++++.      +++|++++|+||+|.+  
T Consensus       189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v--  264 (511)
T 3vp6_A          189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF--  264 (511)
T ss_dssp             GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB--
T ss_pred             cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc--
Confidence              567899999999999999999998   88888875  34679999999998764      7889999999999999  


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~  270 (415)
                       +++++|+++|++||+++++|++|+.+........ .+.....  -.+++.+++|+++.| ..+|+++++++.       
T Consensus       265 -d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~--aDsv~~~~hK~l~~p-~g~g~l~~~~~~-------  333 (511)
T 3vp6_A          265 -DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER--ANSVTWNPHKMMGVL-LQCSAILVKEKG-------  333 (511)
T ss_dssp             -CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG--CSEEEECTTSTTCCC-SCCEEEEESSTT-------
T ss_pred             -ccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCcc--CCEEEECcccccCCC-cCeEEEEEeCHH-------
Confidence             7799999999999999999999998665322111 1111111  125667999997655 568999887633       


Q ss_pred             HHHHHHhh-c-cc----------------c----CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936          271 VVERMKKY-F-DI----------------L----GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC  328 (415)
Q Consensus       271 ~~~~~~~~-~-~~----------------~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  328 (415)
                      +.+..... . ..                +    .....+...++...+   ..++++++.++..++++++.+.|+++|+
T Consensus       334 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~---g~~gl~~~~~~~~~~a~~l~~~L~~~pg  410 (511)
T 3vp6_A          334 ILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK---GTVGFENQINKCLELAEYLYAKIKNREE  410 (511)
T ss_dssp             HHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            33332110 0 00                0    001233334444444   3478899999999999999999999999


Q ss_pred             CcCCC--CCCCceEEEEecCccccCCCCC-----------HHHHHHHHHhhcCeEEEcCCC-CCCCCeEEEEee---CCh
Q 014936          329 ISCPH--KPEGSMAVMLKLNLSLLDDIID-----------DIDFCFKLAKEESVIILPGTA-VGLKNWLRVTFA---VDP  391 (415)
Q Consensus       329 ~~~~~--~p~~g~~~~~~l~~~~~~~~~~-----------~~~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~---~~~  391 (415)
                      ++++.  .|..+.+.|...+. ...+..+           ..++...+. +.|+.+..... .+..+++|++++   ++.
T Consensus       411 ~~l~~~~~p~~~~v~f~~~p~-~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~  488 (511)
T 3vp6_A          411 FEMVFNGEPEHTNVCFWYIPQ-SLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQ  488 (511)
T ss_dssp             EEESSSSCCSSSCEEEEECCG-GGSSCCCCHHHHHHHHHHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCH
T ss_pred             EEEEecCCCCeEEEEEEEeCc-cccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEeCCceEEEEEEecCCCCCH
Confidence            98553  35555544432232 1111000           124555554 45654433111 111357999983   578


Q ss_pred             hhHHHHHHHHHHHHHH
Q 014936          392 YSLEECLDRIKSFYQR  407 (415)
Q Consensus       392 ~~l~~~l~~l~~~~~~  407 (415)
                      ++++.+++.|+++.+.
T Consensus       489 ~di~~ll~~i~~~~~~  504 (511)
T 3vp6_A          489 SDIDFLIEEIERLGQD  504 (511)
T ss_dssp             HHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999887654

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.94  E-value=2.4e-25  Score=209.75  Aligned_cols=288  Identities=15%  Similarity=0.101  Sum_probs=201.9

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-----hCCC
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-----FRHI  146 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~-----~~g~  146 (415)
                      +|++ +...+|++.++++.        ..++.+++++|++|+.. +..++++||+|+++.|+|++....+.     ..|+
T Consensus        63 r~~~-p~~~~l~~~la~l~--------g~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~  132 (400)
T 3nmy_A           63 RTHN-PTRFAYERCVAALE--------GGTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGL  132 (400)
T ss_dssp             TTCC-HHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCC
T ss_pred             cCCC-HHHHHHHHHHHHHh--------CCCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCe
Confidence            4443 34578888888887        23477788888999998 56788999999999999996665543     3599


Q ss_pred             eEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc
Q 014936          147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV  226 (415)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~  226 (415)
                      ++..++.+       |++++++++++++++|++++|+||+|.+++   +++|+++|+++|+++|+|++|+...+.    .
T Consensus       133 ~~~~v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~  198 (400)
T 3nmy_A          133 DFSFVDLT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ----R  198 (400)
T ss_dssp             EEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----C
T ss_pred             EEEEECCC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC----C
Confidence            98888752       799999999999999999999999999975   888899999999999999999854322    1


Q ss_pred             cccccCCCCCeEEEccCccccCCCCceEEE--EEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHH
Q 014936          227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGW--FVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEV  303 (415)
Q Consensus       227 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~  303 (415)
                      ++ .++   ..+++.|+||.++.+|.++|+  +++.+       +++.+.+.... ..+...++....++...++.    
T Consensus       199 ~~-~~g---~div~~S~sK~l~g~g~~~gG~~vv~~~-------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~----  263 (400)
T 3nmy_A          199 PL-SLG---ADLVVHSATKYLNGHSDMVGGIAVVGDN-------AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT----  263 (400)
T ss_dssp             GG-GGT---CSEEEEETTTTTTCSSSCCCEEEEECSC-------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT----
T ss_pred             hh-hcC---CcEEEecCccccCCCCCcceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH----
Confidence            11 122   238899999999888888766  44433       35777776553 23455677777777777764    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhc
Q 014936          304 FFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEE  367 (415)
Q Consensus       304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~  367 (415)
                       +..+.++..+++..+.+.|++.|.+..+.+|.                .|.+++++++...    .....++.. ++-.
T Consensus       264 -l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----~~~~~~~~~-l~~~  337 (400)
T 3nmy_A          264 -LPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----DAAKRFCEK-TELF  337 (400)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----HHHHHHHHH-CSSS
T ss_pred             -HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----HHHHHHHHc-CCcc
Confidence             56677788888999999998877665343442                3678888885310    012233333 2334


Q ss_pred             CeEEEcCCCCC-----------------------CCCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          368 SVIILPGTAVG-----------------------LKNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       368 gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      ++.++.|..+.                       .++.+|+|++..  +.+.+++.|+++++
T Consensus       338 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle--~~~dli~dl~~al~  397 (400)
T 3nmy_A          338 TLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIE--DLGDLRGDLERALV  397 (400)
T ss_dssp             EECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHC
T ss_pred             eEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHHh
Confidence            44445554321                       146899999863  44455566666664

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.94  E-value=5.2e-25  Score=211.02  Aligned_cols=344  Identities=15%  Similarity=0.079  Sum_probs=210.1

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCcHHHHHHHHHHHhhhCCCCCCCC---cEEEe
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVT  106 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~---~i~i~  106 (415)
                      ..+.|-.+.      ..++++|++++.+.+.+....+|+.      .....++++...+++++.+|  .+.+   ..+++
T Consensus        55 ~~i~lias~------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~  126 (490)
T 2a7v_A           55 RGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQP  126 (490)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCC
T ss_pred             cCceEECCC------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeC
Confidence            456666543      3468999999988776433223331      12234666333344433333  3443   23556


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhCCCe--EEEeeccCCCCCCCChhHHHhhcCC-Cce
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYEL--------SAAFRHIE--VRHFDLLPDKGWEVDLDDIESLADQ-NTV  175 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~--------~~~~~g~~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~  175 (415)
                      +||++|+.+++.+++++||+|+++++.|.++..        .+...|..  +..+++++ .++.+|++++++.+++ +++
T Consensus       127 ~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~k  205 (490)
T 2a7v_A          127 YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPR  205 (490)
T ss_dssp             SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred             CchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCc
Confidence            688999999999999999999999999865421        12334543  33444443 3467999999998853 678


Q ss_pred             EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc-ccCCCCcccccccCCCCCeEEEccCccccCCCCceE
Q 014936          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (415)
Q Consensus       176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~  254 (415)
                      +++++.|+||+  .   .++++|.++|+++|+++++|++|... ...+..+.++.  ..   .+++.|+||++  .|.|.
T Consensus       206 lIi~~~s~~~~--~---~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~a---Div~~S~hK~l--~Gp~G  273 (490)
T 2a7v_A          206 LIIAGTSAYAR--L---IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA---DIVTTTTHKTL--RGARS  273 (490)
T ss_dssp             EEEECCSSCCS--C---CCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TC---SEEEEESSGGG--CSCSC
T ss_pred             EEEEcCCCCCC--c---ccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CC---CEEEECCcccC--ccccc
Confidence            88888888875  3   24889999999999999999998643 33343333332  11   27788999985  46677


Q ss_pred             EEEEeeCCCCCCChH--------HHHHHHHhhcc--ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936          255 GWFVTTDPCGMFRKP--------KVVERMKKYFD--ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       255 G~~~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      |++++++..... ++        ++.+.++....  ..++++.....++..++.......+++..+++.++++++.+.|.
T Consensus       274 G~i~~~~~~~~~-~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~  352 (490)
T 2a7v_A          274 GLIFYRKGVKAV-DPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALL  352 (490)
T ss_dssp             EEEEEECSEEEE-ETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hheeeccchhcc-cccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            999997631000 00        14455554422  12334444455555454432223457888999999999999999


Q ss_pred             cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----CCCeEEEEe------eCChhh
Q 014936          325 EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----LKNWLRVTF------AVDPYS  393 (415)
Q Consensus       325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~------~~~~~~  393 (415)
                      +. |+.++..+...+++|+.+....   . +..+ +...|++.||.+..+..++     .++.||++.      +.++++
T Consensus       353 ~~-G~~v~~~~t~t~lv~vdl~~~g---~-~~~~-~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d  426 (490)
T 2a7v_A          353 ER-GYSLVSGGTDNHLVLVDLRPKG---L-DGAR-AERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDD  426 (490)
T ss_dssp             HT-TCEEGGGSCSSSEEEEECTTTT---C-CHHH-HHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHH
T ss_pred             Hc-CcEEecCCCCCeEEEEEeCCCC---C-CHHH-HHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHH
Confidence            87 7874322345678888876421   1 3444 4556678899998654433     257899987      247899


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQR  407 (415)
Q Consensus       394 l~~~l~~l~~~~~~  407 (415)
                      ++++++.|.++++.
T Consensus       427 ~~~~~~~i~~~l~~  440 (490)
T 2a7v_A          427 FRRVVDFIDEGVNI  440 (490)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999888764

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.94  E-value=4.2e-25  Score=213.65  Aligned_cols=331  Identities=10%  Similarity=0.029  Sum_probs=232.4

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC--------CcEEEeCChHHHHHHHHHHhcC---
Q 014936           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP--------NDVFVTSGCTQAIDVAMALLSR---  122 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~--------~~i~i~~g~~~al~~~~~~l~~---  122 (415)
                      +..+.+.+...+... ...|....+..++++.+++|+.+.+|.+...        ...++|+|+|+++..++.+..+   
T Consensus        92 ~~~~~~~~~~~~n~~-~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~  170 (481)
T 4e1o_A           92 PSLLGDMLADAINCL-GFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI  170 (481)
T ss_dssp             HHHHHHHHHHHHCCC-CSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcc-cCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence            345556666666553 3467776788999999999999988765322        3679999999999988887642   


Q ss_pred             ----------------CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC------ceEEEec
Q 014936          123 ----------------PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVII  180 (415)
Q Consensus       123 ----------------~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~  180 (415)
                                      +++.|+++.++|.++...++..|.+++.++++  .++.+|+++|+++++++      +.+|+.+
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~  248 (481)
T 4e1o_A          171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCAT  248 (481)
T ss_dssp             HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEe
Confidence                            46799999999999999999999999999874  45679999999998654      5678888


Q ss_pred             CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      .++|++|.+   +++++|+++|++||+++++|++|+.+.+....... +..+...  ..+..+++|+++.| ..+|++++
T Consensus       249 ~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~a--Dsi~~~~hK~l~~p-~g~g~l~~  322 (481)
T 4e1o_A          249 LGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYA--DSFTFNPSKWMMVH-FDCTGFWV  322 (481)
T ss_dssp             BSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGC--SEEEECHHHHSSCC-SSCEEEEE
T ss_pred             cCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccC--CEEEEChHHhcCCC-CceEEEEE
Confidence            999999988   77999999999999999999999886533221111 1111111  14556899986654 44788877


Q ss_pred             eCCCCCCChHHHHH-HHHhhc-cc------------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHH
Q 014936          260 TDPCGMFRKPKVVE-RMKKYF-DI------------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC  319 (415)
Q Consensus       260 ~~~~~~~~~~~~~~-~~~~~~-~~------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l  319 (415)
                      +++       .... .+.... ..                  +.....+.+.++...+.   .+.++++.++..++++++
T Consensus       323 ~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g---~~g~~~~~~~~~~~a~~l  392 (481)
T 4e1o_A          323 KDK-------YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG---VKNLQAHVRHGTEMAKYF  392 (481)
T ss_dssp             SBH-------HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred             eCH-------HHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHH
Confidence            652       2221 110000 00                  00112344455544442   467889999999999999


Q ss_pred             HHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHH
Q 014936          320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEE  396 (415)
Q Consensus       320 ~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~  396 (415)
                      .+.|+++|+++++ .+....+++++++...    ....++...+.++..+.+.|+... ...++|+++.   +++++++.
T Consensus       393 ~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~-g~~~lR~~~~~~~tt~~di~~  466 (481)
T 4e1o_A          393 ESLVRNDPSFEIP-AKRHLGLVVFRLKGPN----SLTENVLKEIAKAGRLFLIPATIQ-DKLIIRFTVTSQFTTRDDILR  466 (481)
T ss_dssp             HHHHHTCTTEECC-SCCCSSEEEEEESSCH----HHHHHHHHHHHHHCSSBCEEEEET-TEEEEEEECCCTTCCHHHHHH
T ss_pred             HHHHhcCCCeEEe-cCCceeEEEEEeCCch----HHHHHHHHHHHhCCeEEEEeeEEC-CEEEEEEEeCCCCCCHHHHHH
Confidence            9999999999854 5555667777774310    124566677655533555554332 2468999984   37899999


Q ss_pred             HHHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRHA  409 (415)
Q Consensus       397 ~l~~l~~~~~~~~  409 (415)
                      ++++|+++++++.
T Consensus       467 ~~~~i~~~~~~l~  479 (481)
T 4e1o_A          467 DWNLIRDAATLIL  479 (481)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999987754

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.94  E-value=4.8e-25  Score=212.70  Aligned_cols=337  Identities=9%  Similarity=0.015  Sum_probs=230.0

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-------CcEEEeCChHHHHHHHHHHhcC-----
Q 014936           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-------NDVFVTSGCTQAIDVAMALLSR-----  122 (415)
Q Consensus        55 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-------~~i~i~~g~~~al~~~~~~l~~-----  122 (415)
                      ..+.+.+...+... ...|....+..++++.+++|+.+.+|.+...       ...++|+|+|+++..++.+..+     
T Consensus        88 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~  166 (475)
T 3k40_A           88 AIVADMLSGAIACI-GFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE  166 (475)
T ss_dssp             HHHHHHHHHHHCCC-SSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcc-ccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence            44555566666543 3467766788999999999999988865321       3689999999999888877631     


Q ss_pred             --------------CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC------ceEEEecCC
Q 014936          123 --------------PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINP  182 (415)
Q Consensus       123 --------------~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p  182 (415)
                                    +++.|+++.++|.++...++..|++++.++++  .++ +|+++|+++++++      +.+|+++.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~  243 (475)
T 3k40_A          167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLG  243 (475)
T ss_dssp             HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred             hhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEec
Confidence                          24689999999999999999999999999985  345 9999999998754      567888999


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-ccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      +|++|.+   +++++|+++|+++|+++++|++|+.+.+....... +..+..  -..+..+++|+++.| ..+|++++++
T Consensus       244 ~t~~G~~---~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~--~Ds~~~~~hK~l~~p-~g~g~l~~~~  317 (475)
T 3k40_A          244 TTNSCAF---DYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIES--ADSFNFNPHKWMLVN-FDCSAMWLKD  317 (475)
T ss_dssp             CTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEESS
T ss_pred             CCCCcCc---CCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCccc--CCEEEECchhccCCC-CceEEEEEeC
Confidence            9999998   77899999999999999999999875432211111 111111  125667899985443 4588888876


Q ss_pred             CCCCCC----hHHHHHHHH-----hhcccc--CC--chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936          262 PCGMFR----KPKVVERMK-----KYFDIL--GD--PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC  328 (415)
Q Consensus       262 ~~~~~~----~~~~~~~~~-----~~~~~~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  328 (415)
                      +..+..    .+.+...-.     .....+  .+  ...+.+.++...+   ..+.++++.++..++++++.+.|+++|+
T Consensus       318 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~g  394 (475)
T 3k40_A          318 PSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLY---GVENLQAHIRRHCNFAKQFGDLCVADSR  394 (475)
T ss_dssp             GGGC---------------------------CCCGGGTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            432110    000100000     000000  00  1123344444444   2467889999999999999999999999


Q ss_pred             CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHHHHHH
Q 014936          329 ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       329 ~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~  405 (415)
                      ++++ .+.....++++++...    ....++...+.++.++.+.|+...+ ..++|++++   +++++++.++++|++++
T Consensus       395 ~~l~-~~~~~~iv~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di~~~~~~i~~~~  468 (475)
T 3k40_A          395 FELA-AEINMGLVCFRLKGSN----ERNEALLKRINGRGHIHLVPAKIKD-VYFLRMAICSRFTQSEDMEYSWKEVSAAA  468 (475)
T ss_dssp             EEES-SCCBTTEEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEe-cCCceEEEEEEeCCch----HHHHHHHHHHHhCCcEEEEeeEECC-EEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            9854 4545556666664310    1245677777666555566554433 578999984   47899999999999998


Q ss_pred             HHHHH
Q 014936          406 QRHAK  410 (415)
Q Consensus       406 ~~~~~  410 (415)
                      +++.+
T Consensus       469 ~~~~~  473 (475)
T 3k40_A          469 DEMEQ  473 (475)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            87654

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.89  E-value=2.2e-28  Score=233.12  Aligned_cols=335  Identities=16%  Similarity=0.099  Sum_probs=226.6

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++||..|.....  ++ .+|.+++++.+++.......|+. ....+|.+.|++++      + ..+.+++++||+
T Consensus        97 ~dG~~yiD~~~~~~~~~--lGh~~p~V~~Av~~q~~~~~~~~~~~-~~~~~Lae~L~~~~------p-~~~~v~~~nSGs  166 (465)
T 2yky_A           97 VDGHAYVNFLGEYTAGL--FGHSHPVIRAAVERALAVGLNLSTQT-ENEALFAEAVCDRF------P-SIDLVRFTNSGT  166 (465)
Confidence            35888999998873211  22 47889999999887654445544 34567888888776      2 457899999999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHH----hCCC--eEEEeeccCCCCCCCChhHHHhhcC---CCceEEEe
Q 014936          111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAA----FRHI--EVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVI  179 (415)
Q Consensus       111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~----~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i  179 (415)
                      +|+..+++.+.  ..++.|++.+++|+++...+.    ..|.  .+..++.       .|++.|+++++   +++++|+ 
T Consensus       167 eA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi-  238 (465)
T 2yky_A          167 EANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAIL-  238 (465)
Confidence            99999998763  345899999999988665443    1222  1222221       37888988887   4555555 


Q ss_pred             cCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEE
Q 014936          180 INP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (415)
Q Consensus       180 ~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (415)
                      ++| ++++|.+ .+.+.+++|.++|+++|+++|+||+|. +.. +. ......++.   ...+.||||.++. |+|+||+
T Consensus       239 ~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~gv---~pDi~t~sK~lg~-G~piG~v  311 (465)
T 2yky_A          239 VEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGAQEMLGI---SADLTTLGKYIGG-GMSFGAF  311 (465)
Confidence            455 5669965 568889999999999999999999999 632 22 111222221   2335589999875 8999999


Q ss_pred             EeeCCCCCCChHHHHHHHHh------hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC---C
Q 014936          258 VTTDPCGMFRKPKVVERMKK------YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIP---C  328 (415)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~  328 (415)
                      ++++        ++++.+..      ....+.+.+++++.++.+.|+...+   +...++++++.+++.+.|+++.   +
T Consensus       312 ~~~~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~  380 (465)
T 2yky_A          312 GGRR--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAVENQ  380 (465)
Confidence            9876        56666654      1224567889999999888875422   2355666666666666666531   2


Q ss_pred             CcCCCCCCCceEEEEecCccccC--------CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHH
Q 014936          329 ISCPHKPEGSMAVMLKLNLSLLD--------DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDR  400 (415)
Q Consensus       329 ~~~~~~p~~g~~~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~  400 (415)
                      +. ...+..|.++|+.+......        +......++..++ ++||.+.|+.. .  .   +++..+++++++++++
T Consensus       381 ~~-~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~~-~--~---~s~~~t~edid~~l~~  452 (465)
T 2yky_A          381 AP-LQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRGM-Y--A---LSLEIADAGRDAFAEA  452 (465)
Confidence            22 22456788888877531100        0011345666665 67999998762 2  1   6777899999999999


Q ss_pred             HHHHHHHHHH
Q 014936          401 IKSFYQRHAK  410 (415)
Q Consensus       401 l~~~~~~~~~  410 (415)
                      |.++++++..
T Consensus       453 l~~~l~~~~~  462 (465)
T 2yky_A          453 LADFIGEQRA  462 (465)
Confidence            9999877643

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.94  E-value=5.9e-24  Score=202.31  Aligned_cols=287  Identities=16%  Similarity=0.117  Sum_probs=195.7

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEe-e
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHF-D  152 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~-~  152 (415)
                      ...++++.++++++        .+..+++++|++++..++.++.++||+|+++.++|+++...+    +..|+++..+ +
T Consensus        59 ~~~~l~~~la~~~g--------~~~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  130 (421)
T 2ctz_A           59 TVDVLEKRLAALEG--------GKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR  130 (421)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred             HHHHHHHHHHHHhC--------CCceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence            45789999999983        224455666799999999999999999999999999877654    7789998887 5


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEcccc-CCcccCCCCccccccc
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY-GHLVFGDKPFVPMGVF  231 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~  231 (415)
                      .+       |++++++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++| +.. +.+.   ++ ..
T Consensus       131 ~~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~  195 (421)
T 2ctz_A          131 EE-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AW  195 (421)
T ss_dssp             TC-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GG
T ss_pred             CC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-cc
Confidence            42       799999999999999999999999999977   788899999999999999999 643 2222   22 22


Q ss_pred             CCCCCeEEEccCccccCCCCceEEEEEeeCC-CCC-C-ChHHHH---------------------HHHHh--hccccCCc
Q 014936          232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDP-CGM-F-RKPKVV---------------------ERMKK--YFDILGDP  285 (415)
Q Consensus       232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~-~~~~~~---------------------~~~~~--~~~~~~~~  285 (415)
                      +.   .+++.|+||.++.+|.|+|++++.+. ..+ . ....+.                     ...+.  ........
T Consensus       196 ~~---Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~  272 (421)
T 2ctz_A          196 GA---ALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQAL  272 (421)
T ss_dssp             TC---SEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCC
T ss_pred             CC---eEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCC
Confidence            22   38889999999999999999988631 111 0 000110                     00110  01122244


Q ss_pred             hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC-----------------CCceEEEEecCcc
Q 014936          286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP-----------------EGSMAVMLKLNLS  348 (415)
Q Consensus       286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----------------~~g~~~~~~l~~~  348 (415)
                      ++....++...++.     +..+.++..++.+.+.+.|+++|++..+.+|                 ..|..+.+.++. 
T Consensus       273 ~~~~a~~~~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~-  346 (421)
T 2ctz_A          273 GPFEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKG-  346 (421)
T ss_dssp             CHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETT-
T ss_pred             CHHHHHHHHcCcch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCC-
Confidence            55555555555654     4556666778899999999988887643222                 234556666642 


Q ss_pred             ccCCCCCHHHHHHHHHhh---cCeEEEcCCCCC----------------------C-CCeEEEEeeCChhhHHHHHHHHH
Q 014936          349 LLDDIIDDIDFCFKLAKE---ESVIILPGTAVG----------------------L-KNWLRVTFAVDPYSLEECLDRIK  402 (415)
Q Consensus       349 ~~~~~~~~~~~~~~ll~~---~gi~v~~g~~~~----------------------~-~~~iRi~~~~~~~~l~~~l~~l~  402 (415)
                             ..+....++.+   .++.++.|..+.                      . ++.||+|++.  ++++..++.|+
T Consensus       347 -------~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~  417 (421)
T 2ctz_A          347 -------GYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELK  417 (421)
T ss_dssp             -------HHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHH
T ss_pred             -------CHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHH
Confidence                   11222333333   444545452211                      1 4789999875  57888888887


Q ss_pred             HHH
Q 014936          403 SFY  405 (415)
Q Consensus       403 ~~~  405 (415)
                      +++
T Consensus       418 ~al  420 (421)
T 2ctz_A          418 EAL  420 (421)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            764

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.93  E-value=5.3e-26  Score=217.76  Aligned_cols=289  Identities=12%  Similarity=0.076  Sum_probs=189.8

Q ss_pred             CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeec
Q 014936           74 APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL  153 (415)
Q Consensus        74 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~  153 (415)
                      .+.....++++.+|+ ++      .+ +++++++|+++++.+++.+++++||+|+++.|+|.++...+...|++++.++.
T Consensus        54 ~~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~  125 (446)
T 2x3l_A           54 HPEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIET  125 (446)
T ss_dssp             SCSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEE
T ss_pred             CcchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeC
Confidence            334456677887777 62      33 78999999999999999999999999999999999999999999999998887


Q ss_pred             cCCCC----CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC-cccCCCCcccc
Q 014936          154 LPDKG----WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPM  228 (415)
Q Consensus       154 ~~~~~----~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~  228 (415)
                      ..+.+    +.+|++.+   +.++++++++++ .|++|.+++   +++|+++|+++|+++|+||+|+. +.|.+. ....
T Consensus       126 ~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~  197 (446)
T 2x3l_A          126 HQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDST  197 (446)
T ss_dssp             EECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCG
T ss_pred             eeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCCh
Confidence            32222    45788877   456788999999 455999976   67888999999999999999986 334443 2233


Q ss_pred             cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc--cccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      ...+.+   +++.|+||++ .++.++||+++++..  .   + ...+....  ...++++.....++..+++.......+
T Consensus       198 ~~~g~D---i~~~S~~K~l-~~~~g~g~l~~~~~~--i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~  267 (446)
T 2x3l_A          198 LNYQAD---YVVQSFHKTL-PALTMGSVLYIHKNA--P---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDST  267 (446)
T ss_dssp             GGGTCS---EEEECHHHHS-SSCTTCEEEEEETTC--T---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCH
T ss_pred             HHcCCC---EEEECCcccc-ccccccEEEEEcCCc--C---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHH
Confidence            333332   8889999963 333458999997632  1   1 12232221  112344444444443333211000011


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE-cCCCCCCCCeEEE
Q 014936          307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL-PGTAVGLKNWLRV  385 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~iRi  385 (415)
                      +..++.+++++.+.+.     ++.++ .+..+.++|+.++.      .+..++...|.+ +||.+. +|.     +++|+
T Consensus       268 ~~~~~~~~l~~~l~~~-----g~~~~-~~~~~~~l~i~~~~------~~~~~l~~~L~~-~GI~v~~~g~-----~~iRi  329 (446)
T 2x3l_A          268 LFFAKRAQLIECLENK-----GFEML-QVDDPLKLLIKYEG------FTGHDIQNWFMN-AHIYLELADD-----YQALA  329 (446)
T ss_dssp             HHHHHHHHHHHHHHHH-----TCEEE-ECSSTTEEEEECTT------SCHHHHHHHHHH-TTEEESEECS-----SCEEE
T ss_pred             HHHHHHHHHHHHHHHc-----CCEEC-cCCCCeEEEEEeCC------cCHHHHHHHHHH-CCCEEEecCC-----CEEEE
Confidence            2445555555555554     55522 34445578887751      246667666654 599997 543     68999


Q ss_pred             Eee--CChhhHHHHHHHHHHHHHH
Q 014936          386 TFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       386 ~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      +++  .+++++ .++++|++++++
T Consensus       330 ~~~~~~t~e~i-~l~~aL~~~~~~  352 (446)
T 2x3l_A          330 ILPLWHHDDTY-LFDSLLRKIEDM  352 (446)
T ss_dssp             ECCCCCTTCCC-CHHHHHHHHHTC
T ss_pred             EeecCCCHHHH-HHHHHHHHHHHh
Confidence            996  488899 999999888654

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.93  E-value=2.1e-25  Score=214.47  Aligned_cols=299  Identities=12%  Similarity=0.102  Sum_probs=202.4

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH-HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT-QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP  155 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~-~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~  155 (415)
                      ..++.+.+.+++.+.+|.  +++ +++|+|++ .++.+++.++..  +|+.|+++.++|+++...++..|++++.++..+
T Consensus       131 ~~~~~~~~~~~la~~~g~--~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~  207 (456)
T 2z67_A          131 MYALTNKILESFFKQLGL--NVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL  207 (456)
T ss_dssp             HHHHHHHHHHHHHHHTTC--CCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHcCC--CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence            345555566666665553  344 99999999 566656655443  678899999999999999999999999888643


Q ss_pred             -CCCCCCChhHHHhhc-C----CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc
Q 014936          156 -DKGWEVDLDDIESLA-D----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG  229 (415)
Q Consensus       156 -~~~~~~~~~~l~~~~-~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  229 (415)
                       +.++.+|+++|++++ +    +++.+|++++|+||||.+   +++++|+++|+++|+++++|++|+.+..+. .+....
T Consensus       208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i---~~l~~I~~la~~~g~~v~vD~A~~~~~~g~-~~~~~~  283 (456)
T 2z67_A          208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNYY-LEKLKK  283 (456)
T ss_dssp             ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHH-HHHHHH
T ss_pred             cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc---CCHHHHHHHHHHcCCcEEEECcchHHHHHh-hHHHHH
Confidence             345779999999988 4    467778889999999999   567888888999999999999998755311 011111


Q ss_pred             ccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhcccc-CCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-GDPATFIQAAVPSILQQPDEVFFKKT  308 (415)
Q Consensus       230 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~  308 (415)
                      .+....+ +++.|++|. +.+++++||+++++       +++++.+....... ...+...+.++...+.   ...+++.
T Consensus       284 ~~~~~~D-~~~~s~hK~-~~~p~g~G~l~~~~-------~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~---~~~~~~~  351 (456)
T 2z67_A          284 AFKYRVD-AVVSSSDKN-LLTPIGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVSLLSMG---SKNYLEL  351 (456)
T ss_dssp             HHTSCCS-EEEEEHHHH-HCCCSSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH---HHHHHHH
T ss_pred             hhCCCCC-EEEEcCCCC-cCCCCCeEEEEEcC-------HHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH---HHHHHHH
Confidence            1111111 567889997 45568899999954       24666664432211 1122334444444442   4678888


Q ss_pred             HHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCe---EEE------cCCC
Q 014936          309 LNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV---IIL------PGTA  376 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi---~v~------~g~~  376 (415)
                      .++..++++++.+.|++++   ++. +..|.  .++++.+...   +  ...++...|. +.||   .+.      +|..
T Consensus       352 ~~~~~~~~~~l~~~L~~~~~~~g~~-v~~~~--~~v~~~~~~~---~--~~~~l~~~L~-~~gi~~~rv~~~~g~f~G~~  422 (456)
T 2z67_A          352 VKNQKNSKKLLDELLNDLSKKTGGK-FLDVE--SPIASCISVN---S--DPVEIAAKLY-NLRVTGPRGIKKTDHFGNCY  422 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCC-BCCCC--CSSEEEEECS---S--CHHHHHHHHH-HTTEESCEEECTTCHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCE-ecCCC--CeEEEEEecc---c--HHHHHHHHHH-HcCCCcceEEeecCcccccc
Confidence            9999999999999999875   666 43555  4555555210   0  1355666654 5565   343      2333


Q ss_pred             CCC--CCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936          377 VGL--KNWLRVTFA--VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       377 ~~~--~~~iRi~~~--~~~~~l~~~l~~l~~~~  405 (415)
                      |..  .+++|++++  ++++++++++++|++++
T Consensus       423 ~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          423 LGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             SSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred             ccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence            322  479999996  68999999999998754

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.93  E-value=1.9e-23  Score=197.18  Aligned_cols=307  Identities=14%  Similarity=0.115  Sum_probs=210.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-------cCCC
Q 014936           52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-------SRPG  124 (415)
Q Consensus        52 ~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-------~~~g  124 (415)
                      ..++.+++++.+.+...   .|.+..+..++|+.++++++        .++++++++|++++..++.++       .++|
T Consensus        12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g   80 (390)
T 3b8x_A           12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLLMIAALFFTKKPRLKKG   80 (390)
T ss_dssp             CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred             CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence            35688999998888653   34455678999999999983        236788888889999999998       7899


Q ss_pred             CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       125 d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      |+|+++.++|+++...++..|++++.++++++ ++.+|+++|++++++++++|++++   ++|..   .++++|.++|++
T Consensus        81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~~  153 (390)
T 3b8x_A           81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNP---NNFDEINKIIGG  153 (390)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHTT
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccCh---hhHHHHHHHHHH
Confidence            99999999999999999999999999998653 467999999999988899888875   45555   578999999999


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc--CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc-
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS--LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-  281 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s--~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-  281 (415)
                      +|+++|+|++|+.+....     ...++.... +...|  .+|.+. +| +.|++++++       +++.+.++..... 
T Consensus       154 ~~~~li~D~a~~~g~~~~-----~~~~g~~~~-~~~~s~~~~k~~~-~g-~gG~~~~~~-------~~l~~~~~~~~~~g  218 (390)
T 3b8x_A          154 RDIILLEDNCESMGATFN-----NKCAGTFGL-MGTFSSFYSNHIA-TM-EGGCIVTDD-------EEIYHILLCIRAHG  218 (390)
T ss_dssp             SCCEEEEECTTCTTCEET-----TEETTSSSS-EEEEECCTTSSSC-SS-SCEEEEESC-------HHHHHHHHHHTBTT
T ss_pred             cCCEEEEECcCcccCEEC-----Ccccccccc-eEEEEccCCCCCc-cC-CceEEEeCC-------HHHHHHHHHHHhcC
Confidence            999999999999643211     112222111 22222  245432 23 348888864       1354444332110 


Q ss_pred             -------------------------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936          282 -------------------------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS  330 (415)
Q Consensus       282 -------------------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  330 (415)
                                                     +...+++...++...+     +++++..++.+++++++.+.|+++|++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~  293 (390)
T 3b8x_A          219 WTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYLD  293 (390)
T ss_dssp             BSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred             CCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence                                           0113444444444444     4577888899999999999999888876


Q ss_pred             CCCCC--CCce-EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEc---CCCCCC----------------------CCe
Q 014936          331 CPHKP--EGSM-AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP---GTAVGL----------------------KNW  382 (415)
Q Consensus       331 ~~~~p--~~g~-~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~~~~~----------------------~~~  382 (415)
                      .. .+  ..++ .+++.++...  + .+..++...| .++||.+.+   |..|..                      .+.
T Consensus       294 ~~-~~~~~~~~~~~~i~~~~~~--~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (390)
T 3b8x_A          294 VQ-QETGESSWFGFSFIIKKDS--G-VIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNG  368 (390)
T ss_dssp             EC-CCCSBCCCCEEEEEECTTS--C-CCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHE
T ss_pred             cC-CCCCCcccEEEEEEecCcC--c-ccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCE
Confidence            33 32  1222 2455554210  1 1455666655 667999986   332211                      135


Q ss_pred             EEEEee--CChhhHHHHHHHH
Q 014936          383 LRVTFA--VDPYSLEECLDRI  401 (415)
Q Consensus       383 iRi~~~--~~~~~l~~~l~~l  401 (415)
                      +|+++.  ++++|++.+++.|
T Consensus       369 l~l~~~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          369 LFVGNHQIELFDEIDYLREVL  389 (390)
T ss_dssp             EEEECCSSCCHHHHHHHHHHT
T ss_pred             EEeeCCCCCCHHHHHHHHHhh
Confidence            999994  6899999998876

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.93  E-value=6.4e-24  Score=207.34  Aligned_cols=314  Identities=12%  Similarity=0.065  Sum_probs=211.0

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCC------EEEEcCCCCcch
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-------R-PGA------NILLPRPGFPIY  137 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-------~-~gd------~vi~~~p~y~~~  137 (415)
                      .|....+..++++.+.+++.+..|.  +++++++|+|+|+++.+++.++.       + +|+      .|+++.++|+++
T Consensus       139 ~~~~s~~~~~le~~~~~~la~l~g~--~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~  216 (515)
T 2jis_A          139 TYEIAPVFVLMEEEVLRKLRALVGW--SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSI  216 (515)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHHTC--SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHH
T ss_pred             chhhchHHHHHHHHHHHHHHHHhCC--CCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHH
Confidence            4555445566777766666666554  37899999999999999988873       2 575      899999999999


Q ss_pred             HHHHHhCCC---eEEEeeccCCCCCCCChhHHHhhcCC------CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcE
Q 014936          138 ELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL  208 (415)
Q Consensus       138 ~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~  208 (415)
                      ...++..|.   +++.++.+  .++.+|+++|++++++      ++++|++++|+||||.+.   ++++|+++|+++|++
T Consensus       217 ~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~---~l~~I~~la~~~g~~  291 (515)
T 2jis_A          217 QKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD---PLEAIADVCQRHGLW  291 (515)
T ss_dssp             HHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC---CHHHHHHHHHHHTCE
T ss_pred             HHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc---CHHHHHHHHHHcCCe
Confidence            999988888   88888875  3567999999998865      478899999999999994   588889999999999


Q ss_pred             EEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHH----Hhhc-c--
Q 014936          209 VIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM----KKYF-D--  280 (415)
Q Consensus       209 li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~----~~~~-~--  280 (415)
                      +++|++|+.+.+...... .+..+.  ...+++.+++|+++.| .++|+++++++.      ++.+..    ..+. .  
T Consensus       292 l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~------~~~~~~~~~~~~yl~~~~  362 (515)
T 2jis_A          292 LHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTS------NLLKRCHGSQASYLFQQD  362 (515)
T ss_dssp             EEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCS------CHHHHHHCC---------
T ss_pred             EEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChH------HHHHHHhcCCchhccCCc
Confidence            999999998776433221 122221  1127778999996544 569999997741      132221    0000 0  


Q ss_pred             -----------c----cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEec
Q 014936          281 -----------I----LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL  345 (415)
Q Consensus       281 -----------~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l  345 (415)
                                 .    ......+.+.++..++.   ...+++..++..++++++.+.|+++|+++++..|..+.+.+...
T Consensus       363 ~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~  439 (515)
T 2jis_A          363 KFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFV  439 (515)
T ss_dssp             CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEEC
T ss_pred             ccccccCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEe
Confidence                       0    00011334444444443   36688889999999999999999998988553455555444333


Q ss_pred             CccccCC---CCCH-H-------HHHHHHHhhcCeEEEcCCC-CCCCCeEEEEee---CChhhHHHHHHHHHHHHH
Q 014936          346 NLSLLDD---IIDD-I-------DFCFKLAKEESVIILPGTA-VGLKNWLRVTFA---VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       346 ~~~~~~~---~~~~-~-------~~~~~ll~~~gi~v~~g~~-~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~  406 (415)
                      +.. ..+   ..+- .       .+...+ .+.|+.+..... .+..+++|++++   +++++++.+++.|+++++
T Consensus       440 p~~-~~~~~~~~~~~~~l~~~~~~l~~~l-~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~  513 (515)
T 2jis_A          440 PPS-LRGKQESPDYHERLSKVAPVLKERM-VKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ  513 (515)
T ss_dssp             CGG-GTTCTTSTTHHHHHHTHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred             Ccc-ccccccchhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence            321 001   0010 1       133334 455765432111 122468999994   689999999999988764

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.93  E-value=8.8e-25  Score=210.81  Aligned_cols=340  Identities=12%  Similarity=0.050  Sum_probs=221.5

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcC---CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~---~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      .+|+.++||..|.....  ++ .+|.+.+|+.+++...   ....|+. ....++++.+++.+.+..+  ...+++++++
T Consensus        60 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~  134 (472)
T 1ohv_A           60 VDGNRMLDLYSQISSIP--IGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMA  134 (472)
T ss_dssp             TTSCEEEESSHHHHTCS--SCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEES
T ss_pred             CCCCEEEECCCCHhhcc--cCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeC
Confidence            45778999988874322  23 5899999998875321   1123443 3457899999997766443  3567999999


Q ss_pred             ChHHHHHHHHHHhc--------C-----------------CC---CEEEEcCCCCcchHHHHH-hCCCe--------E--
Q 014936          108 GCTQAIDVAMALLS--------R-----------------PG---ANILLPRPGFPIYELSAA-FRHIE--------V--  148 (415)
Q Consensus       108 g~~~al~~~~~~l~--------~-----------------~g---d~vi~~~p~y~~~~~~~~-~~g~~--------~--  148 (415)
                      ||++|++.+++.+.        +                 +|   +.|++.+++|+++...+. ..|..        .  
T Consensus       135 sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~  214 (472)
T 1ohv_A          135 CGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFD  214 (472)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCC
T ss_pred             CchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCC
Confidence            99999999998873        1                 46   899999999998766553 22321        1  


Q ss_pred             -EEeeccCCC-C------C-----CCChhHHHhhcCC------CceEEEecCCCCcccc-CCCHHHHHHHHHHHhhcCcE
Q 014936          149 -RHFDLLPDK-G------W-----EVDLDDIESLADQ------NTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTL  208 (415)
Q Consensus       149 -~~~~~~~~~-~------~-----~~~~~~l~~~~~~------~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~  208 (415)
                       ..++..... .      +     ..|+++|++++++      ++++|++...+|++|. ..+.+.+++|.++|++||++
T Consensus       215 ~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~l  294 (472)
T 1ohv_A          215 WPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCA  294 (472)
T ss_dssp             CCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCE
T ss_pred             CcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCE
Confidence             111211000 0      0     1257888888865      5666665555788997 57899999999999999999


Q ss_pred             EEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchh
Q 014936          209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPAT  287 (415)
Q Consensus       209 li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  287 (415)
                      +|+||+|.++.+.|. ...+..++.. ..+.+.||||.+ ++|   ||++ ++        ++. .+... ...+.+.++
T Consensus       295 li~DEv~~g~g~~g~-~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~  358 (472)
T 1ohv_A          295 FLVDEVQTGGGSTGK-FWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDP  358 (472)
T ss_dssp             EEEECTTTTTTTTSS-SSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCH
T ss_pred             EEEeCcccCCCCCCC-chhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccH
Confidence            999999997665443 1122233311 002234889995 445   7766 32        221 11122 123446788


Q ss_pred             HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC----CC-CcCCCCCCCceEEEEecCccccCCCCCHHHHHHH
Q 014936          288 FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI----PC-ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFK  362 (415)
Q Consensus       288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~-~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~  362 (415)
                      +++.++.++|+...+   +...++++++++++.+.|+++    |. +. ...+ .|.+++++++..     ....+++..
T Consensus       359 ~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~-~~~~-~g~~~~~~~~~~-----~~~~~~~~~  428 (472)
T 1ohv_A          359 SKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFIS-RVRG-RGTFCSFDTPDE-----SIRNKLISI  428 (472)
T ss_dssp             HHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCE-EEEE-ETTEEEEECSSH-----HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEE-eecC-CceEEEEEeCCh-----hHHHHHHHH
Confidence            898888888753211   235677777777777777653    32 32 1123 366777776521     124567777


Q ss_pred             HHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          363 LAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       363 ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++ ++||.+.|+.    .++||+++  .++++++++++++|++++++
T Consensus       429 l~-~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  470 (472)
T 1ohv_A          429 AR-NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILAD  470 (472)
T ss_dssp             HH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             HH-HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            65 5799998853    47999977  47899999999999988764

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.92  E-value=5.9e-24  Score=203.65  Aligned_cols=282  Identities=17%  Similarity=0.151  Sum_probs=184.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHH-hcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeecc
Q 014936           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMAL-LSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLL  154 (415)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~-l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~~  154 (415)
                      .++++.+++++      +++++++++++|++.+++.+..+ ..++||+|+++.++|+.+....    +..|++++.++. 
T Consensus       111 ~~~~~~la~~~------g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-  183 (438)
T 1wyu_A          111 FEYQTMIAELA------GLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-  183 (438)
T ss_dssp             HHHHHHHHHHH------TSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             HHHHHHHHHHh------CCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-
Confidence            45566666665      34667889999999444433333 2368999999999999887554    458999999886 


Q ss_pred             CCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccc-cCCcccCCCCcccccccCC
Q 014936          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV-YGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       155 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~-~~~~~~~~~~~~~~~~~~~  233 (415)
                        .++.+|+++    +++++++|++++| ||||.+.   ++++|+++|+++|+++++|.. ++...+.    .+ ..++.
T Consensus       184 --~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~---~l~~i~~la~~~g~~vivd~d~~a~g~~~----~~-~~~g~  248 (438)
T 1wyu_A          184 --EGGRTPLPE----VGEEVGAVVVQNP-NFLGALE---DLGPFAEAAHGAGALFVAVADPLSLGVLK----PP-GAYGA  248 (438)
T ss_dssp             --BTTBCCCCC----CCTTEEEEEEESS-CTTSBCC---CHHHHHHHHHHTTCEEEEECCTTGGGTBC----CH-HHHTC
T ss_pred             --cCCccCHHH----hCCCeEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEechhhccCcC----CC-ccCCC
Confidence              234577766    5678999999999 9999996   588888899999999996633 2221111    11 22333


Q ss_pred             CCCeEEEccCccccC----CCCceEEEEEeeCCCCCCChHHHHHHH----------------------------Hhhccc
Q 014936          234 TVPILTLGSLSKRWI----VPGWRLGWFVTTDPCGMFRKPKVVERM----------------------------KKYFDI  281 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~  281 (415)
                      +   ++++| +|.|+    +.|.++||+++++.        +.+.+                            +.... 
T Consensus       249 D---~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~--------~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~-  315 (438)
T 1wyu_A          249 D---IAVGD-GQSLGLPMGFGGPHFGFLATKKA--------FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKA-  315 (438)
T ss_dssp             S---EEEEE-CTTTTCCCGGGCSCCEEEEECGG--------GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGS-
T ss_pred             C---EEEEC-CcccCCCccCCCCCeeEEEEcHH--------HHHhCCCceeccccccCCCcceeeeccccccccchhcc-
Confidence            2   55556 56544    45668999998752        22221                            11111 


Q ss_pred             cCCc---hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHH
Q 014936          282 LGDP---ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDID  358 (415)
Q Consensus       282 ~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~  358 (415)
                      +...   +.....++..++.....+.+++..+++.++++++.+.|++++|+.+. .+. ..|.++.+...     .+..+
T Consensus       316 t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~-~~~~~~~~~~~-----~~~~~  388 (438)
T 1wyu_A          316 KSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPF-TPK-PFFNEFALALP-----KDPEA  388 (438)
T ss_dssp             SCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEEC-SCS-SBCSEEEEECS-----SCHHH
T ss_pred             cCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEC-CCC-CeEEEEEEeCC-----CCHHH
Confidence            1111   22222222222332223567888899999999999999999888843 443 33322222211     14667


Q ss_pred             HHHHHHhhcCeEE--EcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHH
Q 014936          359 FCFKLAKEESVII--LPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       359 ~~~~ll~~~gi~v--~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~  405 (415)
                      +...|+ ++||.+  .++..|. ++++||++.  +++++++.++++|++++
T Consensus       389 ~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          389 VRRALA-ERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             HHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHH-HCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence            777775 469998  6776554 689999996  68999999999998753

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.92  E-value=1.5e-23  Score=197.21  Aligned_cols=268  Identities=16%  Similarity=0.149  Sum_probs=191.0

Q ss_pred             HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCC
Q 014936           55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA  125 (415)
Q Consensus        55 ~~~~~a~~~~~~~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i---~~g~~~al~~~~~~l~~~gd  125 (415)
                      .++.+++.+....      ...+.|++. +..+|++.+|++++        .+..++   ++||++++..++.+++++||
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~-~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~GD  102 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGYDDE-GRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPDD  102 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCCChh-HHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence            5577777765321      123456663 67889999999983        344555   88999999999999999999


Q ss_pred             EEEEcC-CCCcchHHH----------HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC----CCCccccCC
Q 014936          126 NILLPR-PGFPIYELS----------AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN----PGNPCGNVY  190 (415)
Q Consensus       126 ~vi~~~-p~y~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~----p~nptG~~~  190 (415)
                      +|+++. +.|..+...          ++..|+++..++.++  ++.+|++++++++++++++|++++    |+||||.+ 
T Consensus       103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v-  179 (409)
T 3jzl_A          103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI-  179 (409)
T ss_dssp             EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH-
T ss_pred             EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc-
Confidence            999998 999988753          456789998888753  456899999999999999999999    99999988 


Q ss_pred             CHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCC
Q 014936          191 SYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFR  267 (415)
Q Consensus       191 ~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~  267 (415)
                        .++++|+++|++  +|+++++|++|+.+.+...+   . ..+.   .++++|+||.++.+| ...||+++++      
T Consensus       180 --~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~g~---Div~~S~sK~lgg~~~~~GG~v~~~~------  244 (409)
T 3jzl_A          180 --EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EVGA---DIIAGSLIKNPGGGLAKTGGYIAGKE------  244 (409)
T ss_dssp             --HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GGTC---SEEEEETTSGGGTTTCSSCEEEEECH------
T ss_pred             --ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-ccCC---eEEEECccccCCccCCceEEEEEeCH------
Confidence              889999999999  99999999999876643221   1 1222   388999999987766 4468888864      


Q ss_pred             hHHHHHHHHhhccc-----cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce---
Q 014936          268 KPKVVERMKKYFDI-----LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM---  339 (415)
Q Consensus       268 ~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~---  339 (415)
                        ++++.+......     ...+......++...+     ..+..++++..+++..+.+.|+++ ++. + .|..+.   
T Consensus       245 --~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-v-~p~~~~~~~  314 (409)
T 3jzl_A          245 --ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGF-----FLAPHVTAQAIKGARFTAAMLAEF-GVE-A-DPVWDAPRT  314 (409)
T ss_dssp             --HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTSCCS
T ss_pred             --HHHHHHHHHhccccccccccccHHHHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHHhC-CCc-c-cCCCCCCCc
Confidence              688877663211     1122221123344444     235677788899999999999988 555 3 333322   


Q ss_pred             --EEEEecCccccCCCCCHHHHHHHHH
Q 014936          340 --AVMLKLNLSLLDDIIDDIDFCFKLA  364 (415)
Q Consensus       340 --~~~~~l~~~~~~~~~~~~~~~~~ll  364 (415)
                        .+.+.++..     ....+++..+.
T Consensus       315 ~~i~~i~l~~~-----~~~~~~~~~L~  336 (409)
T 3jzl_A          315 DLIQSVSFHNK-----EKMVAFAQAIQ  336 (409)
T ss_dssp             SSCCEEECSCH-----HHHHHHHHHHH
T ss_pred             cEEEEEEeCCH-----HHHHHHHHHHH
Confidence              555566421     13445666653

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.92  E-value=1.7e-23  Score=197.51  Aligned_cols=254  Identities=16%  Similarity=0.137  Sum_probs=184.5

Q ss_pred             HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCC
Q 014936           55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA  125 (415)
Q Consensus        55 ~~~~~a~~~~~~~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i---~~g~~~al~~~~~~l~~~gd  125 (415)
                      +.+.+++.+....      ...+.|++. +..+|++.+|+++        ..+..++   ++||++|+..++.+++++||
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~--------g~e~alv~p~~~sGt~A~~~al~all~pGD  117 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIF--------NTESAFVRPHFVNGTHAIGAALFGNLRPND  117 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHH--------TCSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHh--------CCCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence            6778888775332      122456664 6789999999998        3344566   88999999999999999999


Q ss_pred             EEEEcC-CCCcchHH-----------HHHhCCCeEEEeeccCCCCCCCChhHHHhhcC--CCceEEEecC----CCCccc
Q 014936          126 NILLPR-PGFPIYEL-----------SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIIN----PGNPCG  187 (415)
Q Consensus       126 ~vi~~~-p~y~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~----p~nptG  187 (415)
                      +|++++ |.|..+..           .++..|+++..++.   .++.+|+++++++++  +++++|++++    |+||||
T Consensus       118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg  194 (427)
T 3hvy_A          118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL  194 (427)
T ss_dssp             EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred             EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence            999999 99988763           34567899888876   345789999999998  7899999999    999998


Q ss_pred             cCCCHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCC
Q 014936          188 NVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCG  264 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~  264 (415)
                      .+   .++++|+++|++  +|+++++|++|+.+.+...   +. ..+.   .++++|+||.++.+| .+.||+++++   
T Consensus       195 ~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~GG~i~~~~---  261 (427)
T 3hvy_A          195 RI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKE---PT-DVGA---DIIAGSLIKNIGGGIATTGGYIAGKE---  261 (427)
T ss_dssp             CH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEECH---
T ss_pred             cH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCC---Cc-ccCC---eEEEECCcccccccccceEEEEEECH---
Confidence            77   899999999999  8999999999987654322   11 1222   388999999987655 5568888854   


Q ss_pred             CCChHHHHHHHHhhcccc-----CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          265 MFRKPKVVERMKKYFDIL-----GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                           ++++.++......     ..++.....++...+     ..+..+.++..+++..+.+.|+++ ++. + .|..+.
T Consensus       262 -----~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~  328 (427)
T 3hvy_A          262 -----EYVTQATFRVTVPGIGGECGSTFGVMRSLYEGL-----FMAPHVTIEAVKGAVFCARIMELA-GFD-V-LPKYND  328 (427)
T ss_dssp             -----HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred             -----HHHHHHHHHhhcCCcccccCCCHHHHHHHHHhH-----hHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence                 6888887642211     111111123333333     235667788889999999999988 555 3 343333


Q ss_pred             -----EEEEecC
Q 014936          340 -----AVMLKLN  346 (415)
Q Consensus       340 -----~~~~~l~  346 (415)
                           .+.+.+.
T Consensus       329 ~~~~li~~~~l~  340 (427)
T 3hvy_A          329 KRTDIIQAIKFN  340 (427)
T ss_dssp             CCSSSEEEEECS
T ss_pred             CCceEEEEEeCC
Confidence                 6666664

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.91  E-value=3.7e-23  Score=195.16  Aligned_cols=267  Identities=18%  Similarity=0.170  Sum_probs=189.7

Q ss_pred             HHHHHHHHHHHhc------CCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCC
Q 014936           55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA  125 (415)
Q Consensus        55 ~~~~~a~~~~~~~------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i---~~g~~~al~~~~~~l~~~gd  125 (415)
                      +.+.+++.+....      ...+.|+.. +..+|++.+|++++        .+..++   ++||++++..++.+++++||
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~-~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pGD  116 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGYGDI-GRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPGN  116 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCCCHH-HHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCCC
Confidence            5677777664321      122355553 67889999999983        333455   88899999999999999999


Q ss_pred             EEEEcC-CCCcchHH-----------HHHhCCCeEEEeeccCCCCCCCChhHHHhhcC--CCceEEEecC----CCCccc
Q 014936          126 NILLPR-PGFPIYEL-----------SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIIN----PGNPCG  187 (415)
Q Consensus       126 ~vi~~~-p~y~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~----p~nptG  187 (415)
                      +|+++. |.|..+..           .++..|+++..++.+.  ++.+|+++++++++  +++++|++++    |+||+|
T Consensus       117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg  194 (427)
T 3i16_A          117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRAL  194 (427)
T ss_dssp             EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCC
T ss_pred             EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcc
Confidence            999999 99998774           3456789998888753  34689999999998  7899999999    999998


Q ss_pred             cCCCHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCC
Q 014936          188 NVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCG  264 (415)
Q Consensus       188 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~  264 (415)
                      .+   .++++|+++|++  +|+++++|++|+.+.+...   +. ..+.   .++++|+||.++.+| .+.||+++++   
T Consensus       195 ~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~gG~i~~~~---  261 (427)
T 3i16_A          195 LI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKE---PT-DVGA---DLIAGSLIKNIGGGIAPTGGYLAGTK---  261 (427)
T ss_dssp             CH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEECH---
T ss_pred             cH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCC---cc-ccCC---eEEEecCcccCCCCCCceEEEEEECH---
Confidence            77   899999999999  9999999999987664322   11 1222   388999999987766 6779998864   


Q ss_pred             CCChHHHHHHHHhhcc---ccCCchh-HH-HHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          265 MFRKPKVVERMKKYFD---ILGDPAT-FI-QAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       265 ~~~~~~~~~~~~~~~~---~~~~~~~-~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                           ++++.++....   ......+ .. ...+...+     ..+..+.++..+++..+.+.|+++ ++. + .|..+.
T Consensus       262 -----~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~  328 (427)
T 3i16_A          262 -----DCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGL-----FLAPHISMEALKGAILCSRIMELA-GFE-V-MPKYDE  328 (427)
T ss_dssp             -----HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred             -----HHHHHHHHhcccCccCccCCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence                 68888876422   1111111 21 23333333     335678888999999999999988 455 3 444333


Q ss_pred             -----EEEEecCccccCCCCCHHHHHHHH
Q 014936          340 -----AVMLKLNLSLLDDIIDDIDFCFKL  363 (415)
Q Consensus       340 -----~~~~~l~~~~~~~~~~~~~~~~~l  363 (415)
                           .+.+.+...     ....++++.+
T Consensus       329 ~~~~~i~~i~l~~~-----~~~~~f~~~l  352 (427)
T 3i16_A          329 KRSDIIQSIKFNDK-----DKLIEFCKGI  352 (427)
T ss_dssp             CCSSSCEEEECSSH-----HHHHHHHHHH
T ss_pred             CCccEEEEEEECCH-----HHHHHHHHHH
Confidence                 666666421     1234555555

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.91  E-value=8.4e-23  Score=204.20  Aligned_cols=309  Identities=14%  Similarity=0.068  Sum_probs=204.1

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HHhCCCeEEEeeccC
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRHFDLLP  155 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-~~~~g~~~~~~~~~~  155 (415)
                      .-+.++++.+|++++      . .+.+++++|+++++.+++.+++++||+|+++.++|.++... ++..|++++.++...
T Consensus       173 ~~i~e~e~~lA~~~g------a-e~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~  245 (730)
T 1c4k_A          173 GPAVAAEKHAARVYN------A-DKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR  245 (730)
T ss_dssp             THHHHHHHHHHHHTT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE
T ss_pred             HHHHHHHHHHHHHHC------C-CcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCc
Confidence            446899999999983      2 34578889999999999999999999999999999998888 888899998887543


Q ss_pred             CCCCC----CChhHH-----HhhcCCC------c----eEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccC
Q 014936          156 DKGWE----VDLDDI-----ESLADQN------T----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG  216 (415)
Q Consensus       156 ~~~~~----~~~~~l-----~~~~~~~------~----~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~  216 (415)
                      . +++    +|+++|     +++++++      +    +++++++| ||+|.+.   ++++|+++|+++|+++++|++|+
T Consensus       246 ~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~---dl~~I~~la~~~g~~livDeAh~  320 (730)
T 1c4k_A          246 N-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIY---NAHEVVKRIGHLCDYIEFDSAWV  320 (730)
T ss_dssp             C-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEE---CHHHHHHHHGGGBSEEEEECTTC
T ss_pred             c-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeec---CHHHHHHHHHHcCCeEEEEcccc
Confidence            2 233    688888     8888765      4    78999999 5899995   57889999999999999999997


Q ss_pred             Cc-ccCCCC--ccccc--ccCC-CCCeEEEccCccccCCCCceE-EEEEeeCCCC-----CCChHHHHHHHHhh--cccc
Q 014936          217 HL-VFGDKP--FVPMG--VFGS-TVPILTLGSLSKRWIVPGWRL-GWFVTTDPCG-----MFRKPKVVERMKKY--FDIL  282 (415)
Q Consensus       217 ~~-~~~~~~--~~~~~--~~~~-~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~  282 (415)
                      .. .+++..  ..++.  .++. +.+++++.|+||++  +|++. |++++++...     ...    ...++..  ...+
T Consensus       321 ~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~----~~~~~~~~~~~~s  394 (730)
T 1c4k_A          321 GYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCD----HKHFNNSFNLFMS  394 (730)
T ss_dssp             CGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCC----HHHHHHHHHHHSC
T ss_pred             cccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccC----HHHHHHHHHHhCC
Confidence            53 343211  11221  1222 23579999999984  45544 5665654321     111    1122222  1123


Q ss_pred             CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCC-------------------------
Q 014936          283 GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPE-------------------------  336 (415)
Q Consensus       283 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~-------------------------  336 (415)
                      .+++.....++..++.....+...++.+++.++.+.+++.|++ ++++.++ .|.                         
T Consensus       395 tsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~  473 (730)
T 1c4k_A          395 TSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPPVVNGKKWEDGDTEDMANNIDYWRFE  473 (730)
T ss_dssp             SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCSEETTEEGGGSCHHHHTTCGGGGBCC
T ss_pred             CCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-cccccccccccccccccccccchhhccC
Confidence            4455555554444443222223455667788888888888887 6777633 331                         


Q ss_pred             ------------Cc-eE-----EEEecCc-----cccCC-CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CC
Q 014936          337 ------------GS-MA-----VMLKLNL-----SLLDD-IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VD  390 (415)
Q Consensus       337 ------------~g-~~-----~~~~l~~-----~~~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~  390 (415)
                                  .+ ++     +.+..+.     ....+ ..+..++...| +++||.+....    ...+|++++  .+
T Consensus       474 ~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L-~e~GI~v~~~~----~~~ir~~~s~g~t  548 (730)
T 1c4k_A          474 KGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEKSD----LNSILFLMTPAET  548 (730)
T ss_dssp             TTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSEEC----SSEEEEECCTTCC
T ss_pred             ccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHH-HHCCcEEEECC----CCeEEEEeCCCCC
Confidence                        11 11     3343421     00000 12455665555 55699886532    467899884  68


Q ss_pred             hhhHHHHHHHHHHHHHHHH
Q 014936          391 PYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       391 ~~~l~~~l~~l~~~~~~~~  409 (415)
                      +++++.+++.|.++.+.+.
T Consensus       549 ~e~i~~Ll~aL~~i~~~~~  567 (730)
T 1c4k_A          549 PAKMNNLITQLLQLQRLIE  567 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcc
Confidence            8999999999999887654

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.90  E-value=7.5e-23  Score=194.12  Aligned_cols=277  Identities=16%  Similarity=0.170  Sum_probs=183.8

Q ss_pred             cHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEE
Q 014936           54 THVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI  127 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~v  127 (415)
                      .+.+.+++.+.....      ..+.|++ .+..++++.+++++    |......+++++ ||++|+..++.+++++||+|
T Consensus        37 ~~~vl~A~~~~~~~~~~~~~~~g~~y~~-~~~~~l~~~la~~~----g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~V  110 (431)
T 3ht4_A           37 QFRVLESFGKHKISDSHFIPTTGYGYDD-IGRDTLEKVYADVF----GAEAGLVRPQII-SGTHAISTALFGILRPGDEL  110 (431)
T ss_dssp             HHHHHHHHHHTTCCGGGSCCCCTTCCSC-HHHHHHHHHHHHHT----TCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEE
T ss_pred             HHHHHHHHHHhchhhhhcCCCCCCCCCh-hhHHHHHHHHHHHh----CCCcccccceee-CHHHHHHHHHHHhCCCCCEE
Confidence            356777776643211      1123333 23344555555554    422222233345 67899999999999999999


Q ss_pred             EEcC-CCCcchHHHH----------HhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEec-CCCCccccCCCHHHH
Q 014936          128 LLPR-PGFPIYELSA----------AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHL  195 (415)
Q Consensus       128 i~~~-p~y~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~~~l  195 (415)
                      +++. |.|..+...+          +..|++++.++.++  ++.+|+++|++++++++++|+++ +|+||+|..++.+++
T Consensus       111 l~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l  188 (431)
T 3ht4_A          111 LYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQI  188 (431)
T ss_dssp             EECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHH
T ss_pred             EEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHH
Confidence            9998 9999887654          44789999988754  36799999999999999999999 589999999999999


Q ss_pred             HHHHHHHhh--cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHH
Q 014936          196 QKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       196 ~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      ++|+++|++  +|+++|+|++|+.+.+....    ..++.   .++++|+||.++. .+...||+++++        +++
T Consensus       189 ~~i~~la~~~~~~~~livDea~~~~~~~~~~----~~~g~---Di~~~S~sK~lgg~~~~~GG~v~~~~--------~li  253 (431)
T 3ht4_A          189 KEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP----CHVGA---DLMAGSLIKNPGGGIVKTGGYIVGKE--------QYV  253 (431)
T ss_dssp             HHHHHHHHHHCTTCEEEEECTTCTTSSSCCG----GGTTC---SEEEEETTSGGGTTTCSSCEEEEECH--------HHH
T ss_pred             HHHHHHHHhhCCCCEEEEeCCChhhccCCCc----cccCC---eEEEcCccccCCCCCCCceEEEEecH--------HHH
Confidence            999999999  99999999999987754331    12222   2889999998654 223449999864        677


Q ss_pred             HHHHhhccc---c--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC---CCCCCceEEEEe
Q 014936          273 ERMKKYFDI---L--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP---HKPEGSMAVMLK  344 (415)
Q Consensus       273 ~~~~~~~~~---~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~~p~~g~~~~~~  344 (415)
                      +.++.....   .  ..++.....++...+     ..+..+.++..+++..+.+.|+++ ++.+.   ..+..+..+.+.
T Consensus       254 ~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~  327 (431)
T 3ht4_A          254 EACAYRLTSPGIGAEAGASLYSLQEMYQGF-----FLAPHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQ  327 (431)
T ss_dssp             HHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEE
T ss_pred             HHHHHHhccCCcccccCccHHHHHHHHhHh-----hhHHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEE
Confidence            777664221   1  111111123333333     235667788888899999999887 44421   012233356666


Q ss_pred             cCccccCCCCCHHHHHHHHH
Q 014936          345 LNLSLLDDIIDDIDFCFKLA  364 (415)
Q Consensus       345 l~~~~~~~~~~~~~~~~~ll  364 (415)
                      ++..     ....+++..+.
T Consensus       328 l~~~-----~~~~~~~~~l~  342 (431)
T 3ht4_A          328 FDDK-----DRMIAFCQAIQ  342 (431)
T ss_dssp             CCCH-----HHHHHHHHHHH
T ss_pred             eCCH-----HHHHHHHHHHH
Confidence            6421     12345666553

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.90  E-value=4e-22  Score=184.68  Aligned_cols=326  Identities=14%  Similarity=0.051  Sum_probs=219.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC---CC--CC-----CCCcHHHHHHHHHHHhhhCCCCCCC-CcEEE-eCChHHHHHHHHH
Q 014936           51 FHTTHVATEAVAEALLSEKFN---GY--AP-----TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFV-TSGCTQAIDVAMA  118 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~---~y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i-~~g~~~al~~~~~  118 (415)
                      .+.+++|.+++.+.+.....+   .+  ..     ..-+.+.|+.+++++      ++++ ++|++ |+|+|+++++++.
T Consensus        22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~a~~   95 (377)
T 3e77_A           22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL------AVPDNYKVIFLQGGGCGQFSAVPL   95 (377)
T ss_dssp             CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEEEESSHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCCeEEEEcCchHHHHHHHHH
Confidence            678899999999877531100   00  00     122466788888888      3443 57888 5899999999999


Q ss_pred             HhcCC--CCEEEEcCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHH
Q 014936          119 LLSRP--GANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       119 ~l~~~--gd~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      .+..+  ||+|++...++.+.  ...++..|..+..++.+  .++..+++.++..+++++++|.+++..|.||++.|.  
T Consensus        96 ~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi--  171 (377)
T 3e77_A           96 NLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF--  171 (377)
T ss_dssp             HHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS--
T ss_pred             hccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEchh--
Confidence            99865  89988776666543  34566778777766653  334567788888888899999999988999999886  


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC---ChHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF---RKPKV  271 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~---~~~~~  271 (415)
                            +|+++|+++++|.+++.    +..+..+..++     +++.|.+|++|.+|  +|+++.++.....   ..|.+
T Consensus       172 ------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~  234 (377)
T 3e77_A          172 ------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSV  234 (377)
T ss_dssp             ------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGG
T ss_pred             ------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCch
Confidence                  36789999999999997    33444444443     45678899998788  7888887543100   00112


Q ss_pred             HH--HHHhhccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcCCC-CC--CCceEEEEec
Q 014936          272 VE--RMKKYFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCISCPH-KP--EGSMAVMLKL  345 (415)
Q Consensus       272 ~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p--~~g~~~~~~l  345 (415)
                      .+  .........++++.....++.++|+...+. .++...++.+++.+++.+.|+++|++.... .+  ..+..+.+.+
T Consensus       235 ~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~  314 (377)
T 3e77_A          235 LEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRI  314 (377)
T ss_dssp             GCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEE
T ss_pred             hhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEc
Confidence            11  111111223567777777777777643334 588899999999999999999998876211 11  1233455555


Q ss_pred             CccccCCCCC-HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          346 NLSLLDDIID-DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       346 ~~~~~~~~~~-~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +....  -.+ +..++..+ .++||.+.+|..  ..+.+|+|+.  +++++++.+++.|+++.++.
T Consensus       315 ~~~~~--~~~~~~~~l~~l-~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~~  375 (377)
T 3e77_A          315 GNAKG--DDALEKRFLDKA-LELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH  375 (377)
T ss_dssp             SSTTC--CHHHHHHHHHHH-HHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC--chhHHHHHHHHH-HHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence            53100  000 13455554 467999988753  3467999994  68999999999999988763

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.90  E-value=2.3e-22  Score=187.33  Aligned_cols=323  Identities=13%  Similarity=0.034  Sum_probs=210.3

Q ss_pred             CCCcHHHHHHHHHHHhcC----C----C-C-CCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEE-eCChHHHHHHHHH
Q 014936           51 FHTTHVATEAVAEALLSE----K----F-N-GYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFV-TSGCTQAIDVAMA  118 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~----~----~-~-~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i-~~g~~~al~~~~~  118 (415)
                      .+.+++|++++.+.+...    .    . . ......-+.+.|+.+++++      +++. ++|++ |+|+|+++++++.
T Consensus        36 t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~ai~  109 (386)
T 3qm2_A           36 AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL------NIPSNYKVLFCHGGGRGQFAGVPL  109 (386)
T ss_dssp             CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH------TCCTTEEEEEEESCTTHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCchHHHHHHHH
Confidence            567899999987765321    0    0 0 0111346789999999999      3443 46887 6999999999999


Q ss_pred             HhcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeecc-CCCCCCCChhHHHhhcCCCceEEEecCCCCccccC-CCHHH
Q 014936          119 LLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV-YSYQH  194 (415)
Q Consensus       119 ~l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~-~~~~~  194 (415)
                      .+.++||+|++..-++.+  +...++..| ++..++.+ +.++..++++.++.++++++++|.+++..|.||+. .|.++
T Consensus       110 ~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~  188 (386)
T 3qm2_A          110 NLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPD  188 (386)
T ss_dssp             HHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCC
T ss_pred             hccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhh
Confidence            999999998755444443  334556778 88888875 12332367888888898999999999988999996 55444


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC---ChHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF---RKPKV  271 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~---~~~~~  271 (415)
                      +   .     +|+++++|.+++.    +..+..+..++     +.+.|.+|++|.+|  +|++++++.....   ..|.+
T Consensus       189 i---~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~  249 (386)
T 3qm2_A          189 F---G-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSI  249 (386)
T ss_dssp             C---C-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGG
T ss_pred             h---c-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcH
Confidence            4   2     6999999999987    44444454443     45578899998777  8988887543100   00111


Q ss_pred             H--HHHHhhccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhhcCCCC-cCCCCC--CCceEEEEec
Q 014936          272 V--ERMKKYFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIKEIPCI-SCPHKP--EGSMAVMLKL  345 (415)
Q Consensus       272 ~--~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~p--~~g~~~~~~l  345 (415)
                      .  ...........+++.....++.++++...+. .++...++.+++++++.+.|+++ ++ .....+  .....+.+.+
T Consensus       250 ~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~  328 (386)
T 3qm2_A          250 LDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQL  328 (386)
T ss_dssp             GCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEE
T ss_pred             HHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEEC
Confidence            1  1111111123455666666666666543334 58888899999999999999988 54 211112  1223455556


Q ss_pred             CccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          346 NLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       346 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +...     .+.++... |.++||.+.+|..+  .+.+|+|+.  +++++++.+++.|+++.++.
T Consensus       329 ~~~~-----~~~~~~~~-L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~~  385 (386)
T 3qm2_A          329 ADNT-----LDKVFLEE-SFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERRH  385 (386)
T ss_dssp             SSGG-----GHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcc-----ccHHHHHH-HHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            5311     13455555 57789998887654  256999994  58999999999999988753

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.90  E-value=5.7e-22  Score=183.04  Aligned_cols=324  Identities=15%  Similarity=0.101  Sum_probs=214.6

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCC---CC--CC-----CCCcHHHHHHHHHHHhhhCCCCCC-CCc
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GY--AP-----TAGLPLTRRAIAEYLSRDLPYKLT-PND  102 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~-~~~  102 (415)
                      ..++++|..|.      .+.+++|++++.+.+.....+   .|  ..     ..-+.+.|+.+++++      +++ +++
T Consensus         3 ~~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll------~~~~~~~   70 (361)
T 3m5u_A            3 AMRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY------ELNDDYE   70 (361)
T ss_dssp             -CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH------TCCTTEE
T ss_pred             ccceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh------CCCCCce
Confidence            45678888885      567899999999876521100   00  00     123567788888888      344 457


Q ss_pred             EEE-eCChHHHHHHHHHHhcCCCCEEE-EcCCCCc-chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEe
Q 014936          103 VFV-TSGCTQAIDVAMALLSRPGANIL-LPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI  179 (415)
Q Consensus       103 i~i-~~g~~~al~~~~~~l~~~gd~vi-~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i  179 (415)
                      |++ |+|+|+++++++..+. +||++. +....|. .+...++..|+++..++.+.+..+.++++. +  +++++++|.+
T Consensus        71 v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t~lv~~  146 (361)
T 3m5u_A           71 VLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSDNADYAYI  146 (361)
T ss_dssp             EEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCTTSSEEEE
T ss_pred             EEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCCCCCEEEE
Confidence            887 9999999999999998 788652 2222222 234456778999999988654322245565 3  7888999999


Q ss_pred             cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      ++..|.||.+.+.        +++ +|+++++|.+++..    ..+..+..++     +++.|.+|++|.+|  +|+++.
T Consensus       147 ~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~g----~~~id~~~~d-----~~~~s~~K~~gp~G--~g~l~~  206 (361)
T 3m5u_A          147 CSNNTIYGTQYQN--------YPK-TKTPLIVDASSDFF----SRKVDFSNIA-----LFYGGVQKNAGISG--LSCIFI  206 (361)
T ss_dssp             ESEETTTTEECSS--------CCC-CSSCEEEECGGGTT----SSCCCCTTEE-----EEEEETTTTSSCTT--CEEEEE
T ss_pred             eCCCCCcceeCCc--------ccc-cCCEEEEEcccccC----CCCCCcccCC-----EEEEechhccCCCc--cEEEEE
Confidence            9888999998762        233 49999999999873    3333333321     66778999998777  788888


Q ss_pred             eCCCCCCChHHHHHHHHh--------------hccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHHHHhh
Q 014936          260 TDPCGMFRKPKVVERMKK--------------YFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      ++        ++.+.+..              .....++++.....++.++++...+. .++...++.+++++++.+.|+
T Consensus       207 ~~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~  278 (361)
T 3m5u_A          207 RK--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECID  278 (361)
T ss_dssp             EH--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cH--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence            65        34433321              11123466666666666666532223 478888999999999999999


Q ss_pred             cCCCC-cCCCCCC--CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHH
Q 014936          325 EIPCI-SCPHKPE--GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLD  399 (415)
Q Consensus       325 ~~~~~-~~~~~p~--~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~  399 (415)
                      +++++ ..+..+.  ....+.+.++..  .+  -+.++. ..|.++||.+.+|...  .+.+|+|+.  ++++|++.+++
T Consensus       279 ~~~g~~~~~~~~~~rs~~ivsf~~~~~--~~--~~~~~~-~~L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~  351 (361)
T 3m5u_A          279 LSNGFYKGHADKKDRSLMNVSFNIAKN--KD--LEPLFV-KEAEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCE  351 (361)
T ss_dssp             TSTTSEEESSCGGGBCSSEEEEEESSC--TT--HHHHHH-HHHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHH
T ss_pred             HCCCeeeccCCHHHcCCeEEEEECCCc--hh--hhHHHH-HHHHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHH
Confidence            99766 4222221  223455555420  00  123455 4457789999877542  256999994  58999999999


Q ss_pred             HHHHHHHHH
Q 014936          400 RIKSFYQRH  408 (415)
Q Consensus       400 ~l~~~~~~~  408 (415)
                      .|+++.+++
T Consensus       352 al~~~~~~~  360 (361)
T 3m5u_A          352 FMKEFQGKY  360 (361)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999988753

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.89  E-value=1.3e-21  Score=197.55  Aligned_cols=310  Identities=10%  Similarity=-0.009  Sum_probs=196.7

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~  157 (415)
                      -..++++.++++++      . .+.+++++|+++++.+++.+++++||+|+++.|+|.++...+...|++++.++.+.. 
T Consensus       206 ~v~~~ee~la~l~G------~-d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-  277 (755)
T 2vyc_A          206 AFGESEKYAARVFG------A-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-  277 (755)
T ss_dssp             HHHHHHHHHHHHHT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-
T ss_pred             HHHHHHHHHHHHhC------C-CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-
Confidence            35778888888873      2 356788999999999999999999999999999999999989999999998886532 


Q ss_pred             CCC----C-----ChhHHHhhcCC--Cce--------EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCc
Q 014936          158 GWE----V-----DLDDIESLADQ--NTV--------ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL  218 (415)
Q Consensus       158 ~~~----~-----~~~~l~~~~~~--~~~--------~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~  218 (415)
                      +++    +     |++.|++++++  +++        ++++++| ||+|.+.   ++++|+++|+++|+++++|++|+.+
T Consensus       278 ~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~---dl~~I~~ia~~~~~~livDeA~~~~  353 (755)
T 2vyc_A          278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY---NAKEAQDLLEKTSDRLHFDEAWYGY  353 (755)
T ss_dssp             TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEE---CHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred             ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceec---CHHHHHHHHHHcCCEEEEECcCchh
Confidence            232    4     89999998854  343        8899998 7999995   5788899999999999999999754


Q ss_pred             c-cCCC--Ccccccc--cC-CCCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHH
Q 014936          219 V-FGDK--PFVPMGV--FG-STVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQA  291 (415)
Q Consensus       219 ~-~~~~--~~~~~~~--~~-~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (415)
                      . +++.  +..++..  .+ ...+++++.|+||++  +|++ .|++++++.........+.+.+..  ..+.+++.....
T Consensus       354 ~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~--~~s~sp~~~~ia  429 (755)
T 2vyc_A          354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMM--HATTSPLYAICA  429 (755)
T ss_dssp             GGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHH--TSCSSCCHHHHH
T ss_pred             cccCcccCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHH--hCCCCHHHHHHH
Confidence            3 3321  1222211  12 234678999999984  4555 567777653111110112222211  113455555555


Q ss_pred             HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC---------CcCCCCCC--------------------------
Q 014936          292 AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC---------ISCPHKPE--------------------------  336 (415)
Q Consensus       292 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---------~~~~~~p~--------------------------  336 (415)
                      ++..+++.......+++.+++.++.+.+++.|+++++         ++++ .|.                          
T Consensus       430 al~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (755)
T 2vyc_A          430 SNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW-NKEVVTDPQTGKTYDFADAPTKLLTTVQD  508 (755)
T ss_dssp             HHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES-SCSEEECTTTCCEEEGGGSCHHHHHHCGG
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc-Cchhccccccccccccccccchhccchhh
Confidence            4444433211122344555556666666666655433         3322 111                          


Q ss_pred             -----------------Cc------eEEEEecCccccCC-----CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee
Q 014936          337 -----------------GS------MAVMLKLNLSLLDD-----IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA  388 (415)
Q Consensus       337 -----------------~g------~~~~~~l~~~~~~~-----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~  388 (415)
                                       .+      .-+.+.++.....|     ..+...+... |+++||.+....    .+.+|+.++
T Consensus       509 ~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~-L~~~gI~~e~~~----~~~v~~~~~  583 (755)
T 2vyc_A          509 CWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAW-LGRHGIVPTRTT----DFQIMFLFS  583 (755)
T ss_dssp             GTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHH-HHTTTCCCSEEC----SSEEEEECC
T ss_pred             hhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHH-HHHCCCEEeecC----CCeEEEEEC
Confidence                             11      12233333211111     1133555544 567899875432    578999994


Q ss_pred             --CChhhHHHHHHHHHHHHHHHH
Q 014936          389 --VDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       389 --~~~~~l~~~l~~l~~~~~~~~  409 (415)
                        .++++++.+++.|.++.+.+.
T Consensus       584 ~g~t~~~~~~l~~al~~~~~~~~  606 (755)
T 2vyc_A          584 MGVTRGKWGTLVNTLCSFKRHYD  606 (755)
T ss_dssp             TTCCTTTTHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhhh
Confidence              688999999999998876653

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.85  E-value=9.4e-20  Score=172.40  Aligned_cols=338  Identities=14%  Similarity=0.082  Sum_probs=209.2

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++|+..|.-...  ++ .+|++.+|+.+++....... .+.....++.+.|++.+.       ..+.++++++|+
T Consensus        84 ~dG~~ylD~~~g~~~~~--lGH~hp~v~~Av~~q~~~~~~~~-~~~~~~~~lae~l~~~~p-------~~~~v~f~~SGs  153 (454)
T 4ao9_A           84 ADGHRYADFIAEYTAGV--YGHSAPEIRDAVIEAMQGGINLT-GHNLLEGRLARLICERFP-------QIEQLRFTNSGT  153 (454)
T ss_dssp             TTCCEEEESSGGGGTTT--TCSCCHHHHHHHHHHHHTCSCCC-SEESSHHHHHHHHHHHST-------TCSEEEEESSHH
T ss_pred             CCCCEEEEccccHHhhc--ccCCCHHHHHHHHHHHhcCCCcc-CCcHHHHHHHHHHHHhCC-------CCCEEEEeCchH
Confidence            45888999977752211  22 57999999999988654322 223445677777777652       468999999999


Q ss_pred             HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhC------CCeEEEeeccCCCCCCCChhHHHhhcCCC--ceEEEec
Q 014936          111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFR------HIEVRHFDLLPDKGWEVDLDDIESLADQN--TVALVII  180 (415)
Q Consensus       111 ~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~i~  180 (415)
                      +|++.+++....  .-++|+....+|++....+...      ......+|.       -|++.+++.++..  ..+.+|+
T Consensus       154 EA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIv  226 (454)
T 4ao9_A          154 EANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLV  226 (454)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEE
T ss_pred             HHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEe
Confidence            999999988641  2268999999998744322111      112222221       3788888877542  3456677


Q ss_pred             CC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEE
Q 014936          181 NP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (415)
Q Consensus       181 ~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~  258 (415)
                      .| .+..|.+ .+.+.+++|.++|++||+++|.||++.+  ..+.... ...++..+.++   +++|.+ ..|+.+|.++
T Consensus       227 EPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a-~e~~gv~PDi~---t~gK~l-ggG~Piga~~  299 (454)
T 4ao9_A          227 EPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGL-ANKLGIRSDLT---TLGKYI-GGGMSFGAFG  299 (454)
T ss_dssp             CSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCH-HHHHTCCCSEE---EEEGGG-GTTSSCEEEE
T ss_pred             ccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccc-hhccCCCCcEE---Eecccc-CCCCcceeee
Confidence            77 5556755 6788899999999999999999999974  2232211 12223222333   678995 5679999999


Q ss_pred             eeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          259 TTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      +++        ++++.+...     ...+++.+|++..++.+.|+... ++.+++..+.-...++.+.+.+++.+ +. .
T Consensus       300 ~~~--------ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~-~~-~  369 (454)
T 4ao9_A          300 GRA--------DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEG-VA-M  369 (454)
T ss_dssp             ECH--------HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHT-BS-C
T ss_pred             eHH--------HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCC-CC-E
Confidence            865        677665432     12345678999988888876543 23333333333333333333333332 22 1


Q ss_pred             CCCCCceEEEEecCccccCC---C--CC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          333 HKPEGSMAVMLKLNLSLLDD---I--ID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       333 ~~p~~g~~~~~~l~~~~~~~---~--~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                      ....-|.++-+.+......+   .  .+   ...++..++ ++||.+.|.      +.+.++..+++++|++++++|+++
T Consensus       370 ~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p~------~~~~~s~~~T~~dId~~l~al~~~  442 (454)
T 4ao9_A          370 QFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSPR------GFVVLSLPLTDADIDRYVAAIGSF  442 (454)
T ss_dssp             EEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCTT------CEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             EEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcCC------CCEEEeCCCCHHHHHHHHHHHHHH
Confidence            12233555555553211110   0  01   123444554 569998774      345566678999999999999999


Q ss_pred             HHHHHH
Q 014936          405 YQRHAK  410 (415)
Q Consensus       405 ~~~~~~  410 (415)
                      +.++..
T Consensus       443 l~~~~a  448 (454)
T 4ao9_A          443 IGGHGA  448 (454)
T ss_dssp             HHHSGG
T ss_pred             HHhccc
Confidence            987543

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.84  E-value=2.3e-19  Score=177.95  Aligned_cols=305  Identities=14%  Similarity=0.071  Sum_probs=190.2

Q ss_pred             CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936           75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (415)
Q Consensus        75 ~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~  154 (415)
                      +..-+.++++.+|++++       ..+.+++++|++.++.+++.+++++||.|+++.++|.++...+...|++++.++..
T Consensus       193 ~~g~i~eaE~~lA~~fG-------a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~  265 (715)
T 3n75_A          193 HSGPHKEAEQYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPT  265 (715)
T ss_dssp             TBTHHHHHHHHHHHHHT-------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCC
T ss_pred             CcHHHHHHHHHHHHHhC-------CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecc
Confidence            33446799999999983       23456777888899999999999999999999999999999999999999998865


Q ss_pred             CCCCCCC---------ChhHHHhhcCC--Cce---EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-
Q 014936          155 PDKGWEV---------DLDDIESLADQ--NTV---ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-  219 (415)
Q Consensus       155 ~~~~~~~---------~~~~l~~~~~~--~~~---~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-  219 (415)
                      . +.+++         |++.|++++++  +++   ++++++| |++|.+++   +++|+++|+.++  +++||+|+.+. 
T Consensus       266 ~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~  338 (715)
T 3n75_A          266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTN  338 (715)
T ss_dssp             B-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGG
T ss_pred             c-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccc
Confidence            3 34443         89999998864  234   7999999 99999976   556666776653  79999998654 


Q ss_pred             cCCCCcccccccCC---CCC-eEEEccCccccCCCCc-eEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHH
Q 014936          220 FGDKPFVPMGVFGS---TVP-ILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVP  294 (415)
Q Consensus       220 ~~~~~~~~~~~~~~---~~~-~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  294 (415)
                      +++... ....+..   .+. ++++.|+||+++  |+ ..|++++++..  .  .+......... .+.+++++..+++.
T Consensus       339 f~~~~~-~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i--~--~~~~~~~~~~~-~STSpsy~~~Asld  410 (715)
T 3n75_A          339 FSPIYE-GKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDV--N--EETFNEAYMMH-TTTSPHYGIVASTE  410 (715)
T ss_dssp             GSGGGT-TSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCC--C--HHHHHHHHHHT-SCSSCCHHHHHHHH
T ss_pred             cCCccc-cccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchh--h--HHHHHHHHHhh-cCCCchHHHHHHHH
Confidence            332111 0111211   123 366999999954  33 25888887631  1  12222222222 24566666666666


Q ss_pred             HhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCC------CcCCCCCC-----------------------CceE-----
Q 014936          295 SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC------ISCPHKPE-----------------------GSMA-----  340 (415)
Q Consensus       295 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~p~-----------------------~g~~-----  340 (415)
                      .+++......-+++++++.++.+.+++.|+++++      +.++ .+.                       .+.+     
T Consensus       411 aA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~  489 (715)
T 3n75_A          411 TAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPI  489 (715)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEES-SCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTT
T ss_pred             HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeecc-CcccccchhhhccCcccccccccccccCcccCCCe
Confidence            5553222123345667777777777777765432      2211 111                       0111     


Q ss_pred             -EEEecCccccCC-----CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          341 -VMLKLNLSLLDD-----IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       341 -~~~~l~~~~~~~-----~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                       +.+..+.....|     ..++..+.. .|+++||.+.-.+.    ..|-+-+  +.++++++.+++.|.++.+.
T Consensus       490 Kl~i~~~~~~~~G~~~~~Gi~g~~~~~-~L~~~~I~~E~~d~----~~vl~l~s~g~~~~~~~~L~~aL~~~~~~  559 (715)
T 3n75_A          490 KVTLLTPGMEKDGTMSDFGIPASIVAK-YLDEHGIVVEKTGP----YNLLFLFSIGIDKTKALSLLRALTDFKRA  559 (715)
T ss_dssp             EEEEECSCBCTTSCBCSSCCCHHHHHH-HHHHTTCCCSEEET----TEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCCCCccccCCCcHHHHHH-HHHHCCCEEEecCC----CcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence             122222110001     113445444 45778998765432    3444433  56888888888888877654

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.84  E-value=7.4e-19  Score=167.06  Aligned_cols=350  Identities=15%  Similarity=0.110  Sum_probs=212.3

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCC--CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNG--YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~--y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      .+|+.++|+..|.-...  ++ .+|++.+|+++++....+..  +.+.....+|.+.+++..    + .-..+.++++++
T Consensus        61 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~s  133 (456)
T 4atq_A           61 VDGNSFIDLGSGIAVTS--VGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNS  133 (456)
T ss_dssp             TTSCEEEESSHHHHTCT--TCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESS
T ss_pred             CCCCEEEEccccHHHHh--cCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCC
Confidence            45778899977742111  22 47999999999887533211  122222334555555554    1 112457999999


Q ss_pred             hHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhC-C-------------CeEEEeeccC----CCCCCCChhH---
Q 014936          109 CTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-H-------------IEVRHFDLLP----DKGWEVDLDD---  165 (415)
Q Consensus       109 ~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~----~~~~~~~~~~---  165 (415)
                      |++|++.+++...  ..-.+|+....+|++....+... +             ..+..+|...    ......+.+.   
T Consensus       134 GsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  213 (456)
T 4atq_A          134 GAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKR  213 (456)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHH
T ss_pred             hHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHH
Confidence            9999999998764  12368999999999866544321 1             1233333211    0001112222   


Q ss_pred             ----HHhhcCCCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936          166 ----IESLADQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (415)
Q Consensus       166 ----l~~~~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  239 (415)
                          +++.+.....+.+|..| +...|.+ .+.+.+++|.++|++||+++|.||++.++...|... ....++..+.++ 
T Consensus       214 ~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PDiv-  291 (456)
T 4atq_A          214 AITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPDII-  291 (456)
T ss_dssp             HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCSEE-
T ss_pred             HHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccc-cccccCCCCchh-
Confidence                33333445667778888 4556655 678899999999999999999999999977666532 223333333333 


Q ss_pred             EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHH
Q 014936          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~  318 (415)
                        +++|. ...|+.+|.+++++        ++.+.+... ...+++.++++.+++.+.|+...++   +..++.++.-++
T Consensus       292 --t~gK~-lggg~P~~av~~~~--------~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~---~l~~~~~~~g~~  357 (456)
T 4atq_A          292 --TMAKG-IAGGLPLSAITGRA--------DLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQH---DLNGRARHIEEL  357 (456)
T ss_dssp             --EECGG-GGTTSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHH
T ss_pred             --hhhhc-ccCcCCceeeEecH--------HHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhc---cHHHHHHHHHHH
Confidence              56899 46889999999875        566665544 2346788999999999888653222   233344444444


Q ss_pred             HHHHhhc----CCC--CcCCC-CCCCceEEEEecCccccCC--CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--
Q 014936          319 CYNKIKE----IPC--ISCPH-KPEGSMAVMLKLNLSLLDD--IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--  387 (415)
Q Consensus       319 l~~~l~~----~~~--~~~~~-~p~~g~~~~~~l~~~~~~~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--  387 (415)
                      +.+.|++    ++.  ...+. ...-|+++-+++.......  ......+...+ .++|+.+.++...  .+.|||..  
T Consensus       358 l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~-~~~Gvl~~~~g~~--~~~irl~PpL  434 (456)
T 4atq_A          358 ALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAAC-LKEGVIILTCGTY--GNVIRLLPPL  434 (456)
T ss_dssp             HHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECEEECTT--SCEEEECCCT
T ss_pred             HHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHH-HHCCCEEEecCCC--CCEEEEECCC
Confidence            4444433    321  11010 1234667777664321110  00123444444 5679998765432  36799988  


Q ss_pred             eCChhhHHHHHHHHHHHHHH
Q 014936          388 AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       388 ~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ..+++++++++++|.++++.
T Consensus       435 ~it~~~id~~l~~l~~al~a  454 (456)
T 4atq_A          435 VISDELLIDGLEVLAAAIKA  454 (456)
T ss_dssp             TCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHh
Confidence            46899999999999999875

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.83  E-value=1.3e-18  Score=165.91  Aligned_cols=353  Identities=13%  Similarity=0.085  Sum_probs=215.9

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC-cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAG-LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g-~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++|+..|.-....+ -.+|++.+|+++++....  .|....+ ..+....+|+.+.+..+  .+-+.++++++|+
T Consensus        64 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGs  138 (473)
T 4e3q_A           64 VNGRRYLDANSGLWNMVAG-FDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSP--FDSGRVFYTNSGS  138 (473)
T ss_dssp             TTCCEEEETTTTTTTCTTC-SCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSS--CSSCEEEEESSHH
T ss_pred             CCCCEEEEcccCHHHhhcc-CCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCC--CCccEEEEeCchH
Confidence            4578899998775322111 147999999999887532  1211111 12333344444443322  3456899999999


Q ss_pred             HHHHHHHHHhc-------CCC-CEEEEcCCCCcchHHHHHhCCC------------eEEEeeccCC---CCCCCC-----
Q 014936          111 QAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI------------EVRHFDLLPD---KGWEVD-----  162 (415)
Q Consensus       111 ~al~~~~~~l~-------~~g-d~vi~~~p~y~~~~~~~~~~g~------------~~~~~~~~~~---~~~~~~-----  162 (415)
                      +|++.+++...       +++ .+|+....+|++....+.....            ....++....   ......     
T Consensus       139 EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  218 (473)
T 4e3q_A          139 EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV  218 (473)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence            99999998753       233 5788899999875544322211            1122221100   000011     


Q ss_pred             ---hhHHHhhcC---CCceEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC
Q 014936          163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (415)
Q Consensus       163 ---~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  234 (415)
                         .+++++.+.   +...+.++..| +...|++ .+.+.+++|.++|++||+++|.||++.++...|.... ...++..
T Consensus       219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa-~e~~gv~  297 (473)
T 4e3q_A          219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWG-CVTYDFT  297 (473)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCH-HHHTTCC
T ss_pred             HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhH-HHhcCCC
Confidence               223344332   34567778888 5556765 6778999999999999999999999999876665332 2233333


Q ss_pred             CCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------ccccCCchhHHHHHHHHhhCCCcHHHHH
Q 014936          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQAAVPSILQQPDEVFFK  306 (415)
Q Consensus       235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~  306 (415)
                      +.++   +++|.++..++++|.+++++        ++.+.+...        ...+++.+|++.+++.+.|+...+   +
T Consensus       298 PDi~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~---~  363 (473)
T 4e3q_A          298 PDAI---ISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN---E  363 (473)
T ss_dssp             CSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH---S
T ss_pred             CChH---HhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc---c
Confidence            3334   56899655559999999976        677766432        123567889999998888864322   2


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccC------CCCCHHHHHHHHHhhcCeEEEcCCCC
Q 014936          307 KTLNLLKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLD------DIIDDIDFCFKLAKEESVIILPGTAV  377 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~------~~~~~~~~~~~ll~~~gi~v~~g~~~  377 (415)
                      ...++.++.-+++.+.|+++   |.+..  ...-|+++-+++...+..      .......+... +.++|+.+.|..  
T Consensus       364 ~l~~~~~~~g~~l~~~L~~l~~~~~v~~--vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~g--  438 (473)
T 4e3q_A          364 GLAENVRRLAPRFEERLKHIAERPNIGE--YRGIGFMWALEAVKDKASKTPFDGNLSVSERIANT-CTDLGLICRPLG--  438 (473)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHTTSTTEEE--EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH-HHHTTEECEEET--
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcCCCeeE--EeecceEEEEEEecCccccccccccHHHHHHHHHH-HHHCCcEEEecC--
Confidence            33445555555566665543   44331  233466666655321110      01112344444 466799998753  


Q ss_pred             CCCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          378 GLKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       378 ~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                         +.+|+..  ..+++++++++++|.+++++..+++
T Consensus       439 ---~~i~l~PPL~it~~eid~~~~~l~~al~~v~ael  472 (473)
T 4e3q_A          439 ---QSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEV  472 (473)
T ss_dssp             ---TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence               6789887  4689999999999999999987765

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.77  E-value=3.7e-17  Score=150.81  Aligned_cols=307  Identities=14%  Similarity=0.093  Sum_probs=192.7

Q ss_pred             HHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCEEEEcCCCCcchHHHHHhCCCeEEEeeccC-CCCCCC
Q 014936           87 AEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP----GANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEV  161 (415)
Q Consensus        87 a~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~----gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~  161 (415)
                      .+|+. ..|++ .....++++|+|.++.+++.+.+++    ||.|+++..+|.+...++...|+++++++... ++...+
T Consensus       123 ld~L~-~~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~i  200 (501)
T 3hl2_A          123 LDIIK-LAGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRT  200 (501)
T ss_dssp             HHHHH-HTTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEE
T ss_pred             HHHHH-HcCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCC
Confidence            33443 34644 2346899999998877777777653    49999999999999999999999999886522 234678


Q ss_pred             ChhHHHhhcCC---CceEEEecCC-CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccC-CCC
Q 014936          162 DLDDIESLADQ---NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFG-STV  235 (415)
Q Consensus       162 ~~~~l~~~~~~---~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~-~~~  235 (415)
                      |++.+++++++   ...++++++| .|..|.+   +++++|+++|++||+++++|++|+... +....+.....++ .+ 
T Consensus       201 d~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD-  276 (501)
T 3hl2_A          201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID-  276 (501)
T ss_dssp             CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC-
T ss_pred             CHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc-
Confidence            99999998865   3345555544 4544455   689999999999999999999998744 1111111222233 22 


Q ss_pred             CeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHH
Q 014936          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQS  315 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  315 (415)
                        +++.|.+|.+..+ +..|.+..++       +++.+++........+.++ +......++ +...+.+++..++..++
T Consensus       277 --~vVqS~HK~llvp-IGG~ii~~~d-------~e~l~~~~~~yPGr~S~Sp-sldl~~tLL-~lGr~Gy~~ll~e~~el  344 (501)
T 3hl2_A          277 --AFVQSLDKNFMVP-VGGAIIAGFN-------DSFIQEISKMYPGRASASP-SLDVLITLL-SLGSNGYKKLLKERKEM  344 (501)
T ss_dssp             --EEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHHTSCSCBCSHH-HHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred             --EEEecccccceee-cCceEEEeCC-------HHHHHHHHHhCCCCCCCcH-HHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence              6778999997655 2223444443       3566666443311111222 221222222 23346678888888888


Q ss_pred             HHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCe---EE-EcCC----------CCC
Q 014936          316 VDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV---II-LPGT----------AVG  378 (415)
Q Consensus       316 ~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi---~v-~~g~----------~~~  378 (415)
                      .+++.+.|+++.   +-+....|....-+-+.+........ .....+-.+|...+|   -| .+|.          .|+
T Consensus       345 a~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~-~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g  423 (501)
T 3hl2_A          345 FSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRD-KAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFM  423 (501)
T ss_dssp             HHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTS-CHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTT
T ss_pred             HHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccccc-ccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcc
Confidence            888888888641   33323345555555555543211111 223344445555454   23 3444          333


Q ss_pred             C------CCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHh
Q 014936          379 L------KNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       379 ~------~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      .      ..|+-++.  +.+++|++.++++|.+.+.++.++.
T Consensus       424 ~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~  465 (501)
T 3hl2_A          424 SHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKER  465 (501)
T ss_dssp             TTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred             cCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            2      35788877  5799999999999999999987764

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.76  E-value=2.3e-18  Score=174.98  Aligned_cols=344  Identities=13%  Similarity=0.064  Sum_probs=204.0

Q ss_pred             ceeEecccCCCCCCCCC-C-cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHH
Q 014936           36 KVISLAMGDPTVHSCFH-T-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQA  112 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~-~-~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~a  112 (415)
                      .++|+..|.-..  +++ . +|++.+|+++++..-.+..+..  ...+....+|+.+.+..+  -. .+.++++++|++|
T Consensus       381 ~ylD~~sg~~~~--~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~--~~~~~~~~Lae~L~~~~p--~~~l~~vff~~SGSeA  454 (831)
T 4a0g_A          381 QQFDACASWWTQ--GPDPTFQAELAREMGYTAARFGHVMFPE--NVYEPALKCAELLLDGVG--KGWASRVYFSDNGSTA  454 (831)
T ss_dssp             EEEETTHHHHTC--CCCHHHHHHHHHHHHHHHHHHSSCCCTT--EECHHHHHHHHHHHHTTT--TTTCCEEEEESSHHHH
T ss_pred             heeeecccHhhc--CCCCCCCHHHHHHHHHHHhhcccccccc--cCCHHHHHHHHHHHHhCC--CCCCCEEEECCChhHH
Confidence            677887763111  133 3 7999999999877522211111  112333344555443222  12 4689999999999


Q ss_pred             HHHHHHHhc-----CCC------------CEEEEcCCCCcchHHHHHh-CCCe---------------E-----------
Q 014936          113 IDVAMALLS-----RPG------------ANILLPRPGFPIYELSAAF-RHIE---------------V-----------  148 (415)
Q Consensus       113 l~~~~~~l~-----~~g------------d~vi~~~p~y~~~~~~~~~-~g~~---------------~-----------  148 (415)
                      ++.+++...     ..|            .+||....+|++-...+.. .|..               +           
T Consensus       455 ~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  534 (831)
T 4a0g_A          455 IEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSN  534 (831)
T ss_dssp             HHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEET
T ss_pred             HHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccC
Confidence            999998862     222            2688888888865444332 2210               0           


Q ss_pred             --EEeeccCC------C--CCCCC------------------hhHHHhhcC-------CCceEEEecCC--CCccccC-C
Q 014936          149 --RHFDLLPD------K--GWEVD------------------LDDIESLAD-------QNTVALVIINP--GNPCGNV-Y  190 (415)
Q Consensus       149 --~~~~~~~~------~--~~~~~------------------~~~l~~~~~-------~~~~~v~i~~p--~nptG~~-~  190 (415)
                        ..++....      +  .+ -+                  .+.|++.++       ....+.++..|  ++..|.. +
T Consensus       535 ~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~  613 (831)
T 4a0g_A          535 GSWNISLPESFSEIAPEYGTF-TSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMV  613 (831)
T ss_dssp             TEEEEECCTTSCCCCSSTTEE-SCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEE
T ss_pred             CceEecCCccccccccccccc-cchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccC
Confidence              01111100      0  00 01                  256777664       23456677777  5777776 5


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChH
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKP  269 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~  269 (415)
                      |.+.+++|.++|++||+++|+||++.++...|... ....++..++++   +++|.++. | +++|++++++        
T Consensus       614 ~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~--------  680 (831)
T 4a0g_A          614 DPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD--------  680 (831)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH--------
T ss_pred             CHHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH--------
Confidence            88899999999999999999999999887666543 223333333333   68999655 6 8999999976        


Q ss_pred             HHHHHHHhh-------ccccCCchhHHHHHHHHhhCCCcH-HHHHHH---HHHHHH-HHHHHHHHhhcCCCCcCCCCCCC
Q 014936          270 KVVERMKKY-------FDILGDPATFIQAAVPSILQQPDE-VFFKKT---LNLLKQ-SVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       270 ~~~~~~~~~-------~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~---~~~~~~-~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      ++++.+...       ...+++.++++++++.+.|+...+ +..++.   .+++++ ..+.+.+.+.+.|.+. . ....
T Consensus       681 ~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~-~-vrg~  758 (831)
T 4a0g_A          681 AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQ-R-VVVI  758 (831)
T ss_dssp             HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEE-E-EEEE
T ss_pred             HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-e-Eeec
Confidence            677766432       123567789999888887753111 111111   111111 1123444555565554 2 2345


Q ss_pred             ceEEEEecCccccC-C--CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLD-D--IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       338 g~~~~~~l~~~~~~-~--~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      |.++.+.+...... .  .....++...+ .++||.+.|+.     +.||+++  .++++++++++++|.+++++
T Consensus       759 Gl~~~iel~~~~~~~~~~~~~a~~~~~~l-~e~Gv~v~p~g-----~~lrl~pp~~~t~e~id~~~~~l~~~l~~  827 (831)
T 4a0g_A          759 GTLFALELKADASNSGYASLYAKSLLIML-REDGIFTRPLG-----NVIYLMCGPCTSPEICRRLLTKLYKRLGE  827 (831)
T ss_dssp             TTEEEEEEC---------CHHHHHHHHHH-HHTTEECCCBT-----TEEEEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             ccEEEEEEecCccccccchHHHHHHHHHH-HHCCcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            67777776431100 0  00123455554 56799998863     7899996  57899999999999988764

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.73  E-value=2.1e-15  Score=138.54  Aligned_cols=345  Identities=14%  Similarity=0.061  Sum_probs=207.0

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCC--cEEEeC
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTS  107 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~i~~  107 (415)
                      .-|+|=...      ...++.+.+++-..+.+....+||      -.+-..+++....+..++.+|......  +|- ..
T Consensus        55 ~~ieLIASE------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQ-P~  127 (490)
T 3ou5_A           55 RGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQ-PY  127 (490)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECC-CS
T ss_pred             cCceEecCC------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCC-cC
Confidence            345554443      456788988888777653333443      222244555555555555565332211  333 34


Q ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH--------HhCC--CeEEEeeccCCCCCCCChhHHHhhcCC-CceE
Q 014936          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--------AFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVA  176 (415)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~  176 (415)
                      +|++|+..++.++++|||+|+..+..+.++...-        ...|  .+...+++++++ ..+|.+++++.... ++++
T Consensus       128 SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t-~~IDyd~~~~~A~~~kPkl  206 (490)
T 3ou5_A          128 SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKT-GLIDYNQLALTARLFRPRL  206 (490)
T ss_dssp             SHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTT-TEECHHHHHHHHHHHCCSE
T ss_pred             CHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCC-CcccHHHHHHHHhhcCCCe
Confidence            5678889999999999999999988877653221        1112  234455565543 46999999886654 6776


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  255 (415)
                      |+.....+|.  .+   +.+++.++|++.|.++++|-+|..+. -.|..+.|+.. . +   |+..|.+|+  +.|.|.|
T Consensus       207 Ii~G~SaY~r--~i---d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-A-D---vVTtTTHKT--LrGPrGG  274 (490)
T 3ou5_A          207 IIAGTSAYAR--LI---DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-A-D---IVTTTTHKT--LRGARSG  274 (490)
T ss_dssp             EEECCSSCCS--CC---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-C-S---EEEEESSST--TCSCSCE
T ss_pred             EEECCccCcc--cc---CHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-c-e---EEecccccc--ccCCCce
Confidence            6665444433  22   36777777779999999999995444 44444445432 2 2   778899999  6788889


Q ss_pred             EEEeeCCCCCCC-------hHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          256 WFVTTDPCGMFR-------KPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       256 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      .|.+++...-..       ..++.+++.......  +++.....++.+.++.+.....++...+++.++++.|.+.|.+.
T Consensus       275 ~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~  354 (490)
T 3ou5_A          275 LIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER  354 (490)
T ss_dssp             EEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC
Confidence            999876310000       003556666653322  33333333444433433223567889999999999999999988


Q ss_pred             CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCCC-CCCCCeEEEEe------eCChhhHH
Q 014936          327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGTA-VGLKNWLRVTF------AVDPYSLE  395 (415)
Q Consensus       327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~-~~~~~~iRi~~------~~~~~~l~  395 (415)
                       |+.++........+++++....   . + ...++.+|.+.||.+.    |+.. ...++.|||+.      +..+++++
T Consensus       355 -G~~vvsGgTdnHlvLvDl~~~g---~-t-G~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~  428 (490)
T 3ou5_A          355 -GYSLVSGGTDNHLVLVDLRPKG---L-D-GARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFR  428 (490)
T ss_dssp             -TCEEGGGSCSSSEEEEECGGGT---C-C-HHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHH
T ss_pred             -CCeeecCCCCceEEEEeccccC---C-C-HHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHH
Confidence             8885545556677888875421   1 3 3456677788999986    4431 11257899999      24678999


Q ss_pred             HHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQ  406 (415)
Q Consensus       396 ~~l~~l~~~~~  406 (415)
                      +..+.|.+++.
T Consensus       429 ~IA~~I~~~l~  439 (490)
T 3ou5_A          429 RVVDFIDEGVN  439 (490)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88888887764

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.72  E-value=5.4e-16  Score=145.16  Aligned_cols=318  Identities=12%  Similarity=0.054  Sum_probs=190.4

Q ss_pred             cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCEEEEcCCCCcchHHHHHhCCCeEEEeecc
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP----GANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~----gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~  154 (415)
                      ...+.+.+..++.+..|.+ +....++++|+|.+..+++.+.+++    ++.|+++..+|.+...++...|+.++.++..
T Consensus        96 ~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~  174 (450)
T 3bc8_A           96 LNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENV  174 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred             HHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEee
Confidence            4567778888887767643 2235688888874444444444333    8999999999999999999999998888653


Q ss_pred             C-CCCCCCChhHHHhhcCC---CceEEEecCCC-CccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCC-cccc
Q 014936          155 P-DKGWEVDLDDIESLADQ---NTVALVIINPG-NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPM  228 (415)
Q Consensus       155 ~-~~~~~~~~~~l~~~~~~---~~~~v~i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~  228 (415)
                      + ++...+|++.|++++++   ..+++++.+|+ +.+|.+   +++++|+++|++||+++++|++|+........ +...
T Consensus       175 ~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a  251 (450)
T 3bc8_A          175 LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQG  251 (450)
T ss_dssp             EETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHH
T ss_pred             ecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHH
Confidence            2 23567999999999865   34666777774 456677   78999999999999999999999864321000 0011


Q ss_pred             cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKT  308 (415)
Q Consensus       229 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  308 (415)
                      ......|  .++.|.+|++. .-...+++..++       ++..+.+........+.++ +......++.. ..+.+.+.
T Consensus       252 ~~~~~AD--~~v~S~HK~l~-a~~~~~~l~~rd-------~~~~~~~~~~~~g~~s~Sp-sL~l~~~l~~~-G~~g~~~~  319 (450)
T 3bc8_A          252 ARVGRID--AFVQSLDKNFM-VPVGGAIIAGFN-------EPFIQDISKMYPGRASASP-SLDVLITLLSL-GCSGYRKL  319 (450)
T ss_dssp             HHHSCCC--EEEEEHHHHHS-CCSSCEEEEESC-------HHHHHHHHHHSCSCBCSHH-HHHHHHHHHHH-HHHHHHHH
T ss_pred             hcccCCC--EEEECCccCCC-chhccEEEEecC-------HHHHHHHHHHhhcCCcccH-HHHHHHHHHHH-HHHHHHHH
Confidence            1111111  56779999954 334456666644       3455555443311122233 22222223322 34556666


Q ss_pred             HHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcC---eEEEc--------C
Q 014936          309 LNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEES---VIILP--------G  374 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~g---i~v~~--------g  374 (415)
                      .++..++.+++.+.|++++   +..+...+..+.-..+.++........+...+...+ ...|   .-+.+        |
T Consensus       320 i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~-~~~g~sG~~v~~~~~~~~~~~  398 (450)
T 3bc8_A          320 LKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTVSG  398 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEETT
T ss_pred             HHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEe-cCCCCccceeeecccccchhH
Confidence            6666777788888887665   665332232221122222211000001344554444 2223   33331        0


Q ss_pred             C---CCC------CCCeEEEEe--eCChhhHHHHHHHHHHHHHHHHHHhh
Q 014936          375 T---AVG------LKNWLRVTF--AVDPYSLEECLDRIKSFYQRHAKQLQ  413 (415)
Q Consensus       375 ~---~~~------~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~~~~~  413 (415)
                      .   .|+      ...+|-+.+  +.++++++.++++|.++.+++.+++.
T Consensus       399 ~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~~~  448 (450)
T 3bc8_A          399 HTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQT  448 (450)
T ss_dssp             EEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhhhc
Confidence            1   111      135565555  57899999999999999888777653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	415
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	7e-70
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	3e-66
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-63
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	6e-54
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	9e-48
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	3e-46
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	3e-41
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	4e-40
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	7e-39
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	1e-34
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	5e-34
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	1e-33
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	6e-30
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	8e-30
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	3e-29
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	5e-29
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	3e-28
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	2e-27
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	3e-27
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	6e-26
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	2e-25
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	6e-25
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	1e-24
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	3e-21
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	4e-19
d1fg7a_	354	c.67.1.1 (A:) Histidinol-phosphate aminotransferas	7e-11
d1p3wa_	391	c.67.1.3 (A:) Cysteine desulfurase IscS {Escherich	5e-10
d1lc5a_	355	c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxyl	6e-10
d2f8ja1	334	c.67.1.1 (A:1-334) Histidinol-phosphate aminotrans	1e-06
d2e7ja1	364	c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (	1e-06
d1svva_	340	c.67.1.1 (A:) Low-specificity threonine aldolase {	0.002
d1eg5a_	376	c.67.1.3 (A:) NifS-like protein/selenocysteine lya	0.002
d1c7ga_	456	c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi	0.004

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  223 bits (569), Expect = 7e-70
 Identities = 84/376 (22%), Positives = 155/376 (41%), Gaps = 20/376 (5%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +     V S + G+P     F+T     EA   AL  +    Y P AG P  R AIA+ L
Sbjct: 26  KAEGIDVCSFSAGEPD----FNTPKHIVEAAKAAL-EQGKTRYGPAAGEPRLREAIAQKL 80

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            RD       +++ VT+G  Q+I   M  +  PG  +++P P +  Y             
Sbjct: 81  QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVI 140

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
                +  ++V  + I       T  LV   P NP G VY+   ++ +A+ A +    V+
Sbjct: 141 LPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVL 200

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           +DE+Y  +++ D   + +G          +     +K + + GWR+G+            
Sbjct: 201 SDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAG-------PV 253

Query: 269 PKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPC 328
           P V    K       +  TF Q    +  +   +   ++ L    +      + +  +P 
Sbjct: 254 PLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQD-CVQEMLAAFAERRRYMLDALNAMPG 312

Query: 329 ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA 388
           + CP KP+G+  +   +           +DFC +L  +  V  +PG A G  + +R+++A
Sbjct: 313 LECP-KPDGAFYMFPSIA----KTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA 367

Query: 389 VDPYSLEECLDRIKSF 404
            D  +++  ++R++ F
Sbjct: 368 TDLDTIKRGMERLEKF 383

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  213 bits (544), Expect = 3e-66
 Identities = 85/375 (22%), Positives = 150/375 (40%), Gaps = 21/375 (5%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
            +    +++L  G+P     F T     EA   AL ++    YAP AG+P  R A+AE  
Sbjct: 27  RRQGVDLVALTAGEPD----FDTPEHVKEAARRAL-AQGKTKYAPPAGIPELREALAEKF 81

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R+    +TP +  VT G +QA+      +  PG  +++  P +  Y     F    V  
Sbjct: 82  RRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVE 141

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            + LP++G+  D + +       T ALV+ +P NP G VY  + L+ LA  A +    ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DE+Y HL++  + F P  V       LT+   +K + + GWR+G+             +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHT--LTVNGAAKAFAMTGWRIGYACG--------PKE 251

Query: 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330
           V++ M             I            E          +         ++ +  + 
Sbjct: 252 VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALG 311

Query: 331 CP-HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAV 389
               +P G+  V++         I  D     +   E  V ++PGT       +R+++A 
Sbjct: 312 LKAVRPSGAFYVLMD-----TSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYAT 366

Query: 390 DPYSLEECLDRIKSF 404
              +L + L+R    
Sbjct: 367 SEENLRKALERFARV 381

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  206 bits (524), Expect = 3e-63
 Identities = 85/381 (22%), Positives = 160/381 (41%), Gaps = 21/381 (5%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
              K VISL +G+P     F T     E   EAL  +    Y P  GL   R AIAE L 
Sbjct: 22  AGMKDVISLGIGEPD----FDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEKLK 76

Query: 92  RDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
           +    +  P  ++ V  G  QA  + ++   + G  +L+P P F  Y  +      +   
Sbjct: 77  KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 136

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
                +  + +++D+++      T AL+I +P NP G V + + L+++A+   +   +VI
Sbjct: 137 VPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196

Query: 211 ADEVYGHLVFGDKPFVPM-GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269
           +DEVY H ++ D     +  + G     +T+   SK + + GWRLG+             
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVK 256

Query: 270 KVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCI 329
             +                  AA  ++  +      ++      +   + + ++ E+   
Sbjct: 257 FQMYNATCPVTF------IQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL- 309

Query: 330 SCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTF 387
               KP+G+  +  ++     D  +    F   + KE  V ++PG+A G   + ++R+++
Sbjct: 310 -PTVKPKGAFYIFPRIR----DTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISY 364

Query: 388 AVDPYSLEECLDRIKSFYQRH 408
           A     LEE +DR++   +  
Sbjct: 365 ATAYEKLEEAMDRMERVLKER 385

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  182 bits (461), Expect = 6e-54
 Identities = 112/376 (29%), Positives = 176/376 (46%), Gaps = 12/376 (3%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           EK   KVI L +GDP     F       EA  +A+  E  N Y  + GLP  R+AI E  
Sbjct: 26  EKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAI-KEGHNYYGDSEGLPELRKAIVERE 83

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     +TP+DV VT+  T+A+ +    L  PG  IL+P P +P Y     F   +   
Sbjct: 84  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVE 143

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           +  + ++ W+ D+DDI       T A+ +INP NP G +Y  + L+++   A + +  VI
Sbjct: 144 YRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVI 203

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DE+Y  + +  +   P  +    VP++ +  LSK +   GWRLG+    DP       +
Sbjct: 204 SDEIYDLMTYEGEHISPGSLTKD-VPVIVMNGLSKVYFATGWRLGYMYFVDPENKLS--E 260

Query: 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330
           V E + +   I   P T  Q A  + L  P + + K+ +  LK+  D  Y ++ EIP IS
Sbjct: 261 VREAIDRLARIRLCPNTPAQFAAIAGLTGPMD-YLKEYMKKLKERRDYIYKRLNEIPGIS 319

Query: 331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA 388
              KP+G+  +  K+ +       +D +F   +     V+ + G+  G       R  F 
Sbjct: 320 T-TKPQGAFYIFPKIEVG---PWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL 375

Query: 389 VDPYSLEECLDRIKSF 404
                LEE +DR + F
Sbjct: 376 PPIEILEEAMDRFEKF 391

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  166 bits (421), Expect = 9e-48
 Identities = 44/396 (11%), Positives = 107/396 (27%), Gaps = 60/396 (15%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL--PLTRRAIAEYLSRDL 94
              +A GD      +   H    AV  +        + P +        + I E      
Sbjct: 58  SADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVG 117

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI 146
                   +    G TQ I   +  LS         P + ++   P +P++     +   
Sbjct: 118 NAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFD- 176

Query: 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206
                       W  +  +  ++++      ++ +P NP G +                 
Sbjct: 177 -------KKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH--------------A 215

Query: 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
            +     +Y  + +    + P+         + L ++SK     G R GW +  D     
Sbjct: 216 VIKGCKSIYDMVYYWPH-YTPI--KYKADEDILLFTMSKFTGHSGSRFGWALIKDES--- 269

Query: 267 RKPKVVERMKKYFDILG-DPATFIQAAVPSILQQPDEV----------FFKKTLNLLKQS 315
               V   +  Y            Q     +L++   +                  L++ 
Sbjct: 270 ----VYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRER 325

Query: 316 VDICYNKIKEIPCISCPHKPEGSMAVMLKL------NLSLLDDIIDDIDFCFKLAKEESV 369
                  + +    S    P+       +       + + +    ++   C++  +   +
Sbjct: 326 WVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRI 385

Query: 370 IILPGTAVGL-KNWLRVTFAVDPYSLEECLDRIKSF 404
               G        ++R++        ++ +  +K  
Sbjct: 386 NTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKDM 421

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  162 bits (409), Expect = 3e-46
 Identities = 125/396 (31%), Positives = 206/396 (52%), Gaps = 13/396 (3%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83
           +  +     + K +I L++GDPT+     T+    + + EA+ S++ NGY PT G P  R
Sbjct: 19  VSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAR 78

Query: 84  RAIAEYLSR------DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY 137
            A+A +         +L   +  ++V + SG +  I +A+  +   G   L+P+PGFP Y
Sbjct: 79  EAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHY 138

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197
           E       I +  ++  P+  WE DLD+I  L D  T  L++ NP NPCG+ +S +H++ 
Sbjct: 139 ETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVED 198

Query: 198 LAETANKLKTLVIADEVYGHLVFGDKPFVP----MGVFGSTVPILTLGSLSKRWIVPGWR 253
           +   A +L+  + +DE+Y  +VF  K        +  F +TVP + LG  +K  +VPGWR
Sbjct: 199 IVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWR 258

Query: 254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK 313
           LGW +  DP G    P  +E +K+   ++  P T +QAA+   L    +    + +  ++
Sbjct: 259 LGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIE 316

Query: 314 QSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILP 373
           +S    YN I E   ++    P G+M +M +++L    DI  D++F  KL +EE+V +LP
Sbjct: 317 ESAMYLYNHIGECIGLAP-TMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLP 375

Query: 374 GTAVGLKNWLRVTFAVDPYSLEECLDRIKSFYQRHA 409
           GT      + R+T         E ++RIK+F QRHA
Sbjct: 376 GTIFHAPGFTRLTTTRPVEVYREAVERIKAFCQRHA 411

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score =  148 bits (373), Expect = 3e-41
 Identities = 88/374 (23%), Positives = 154/374 (41%), Gaps = 25/374 (6%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
            K  + VI+L  G+P     F T     E     L  +    Y    G+   R  IA+ +
Sbjct: 24  IKKGEDVINLTAGEPD----FPTPEPVVEEAVRFL-QKGEVKYTDPRGIYELREGIAKRI 78

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
                  ++P+ V VT+G  QA+  A   L  PG  +++  P +  Y          V  
Sbjct: 79  GERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNV 138

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            +    K ++  L+++E L    T A++I +P NP G VY  + L+ L   A K    +I
Sbjct: 139 VETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYII 198

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DEVY  LV+ D+    + V      I+ +   SK   + GWR+G+ ++++         
Sbjct: 199 SDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKI 258

Query: 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330
                               A   ++     +  +       +++  +   K   +    
Sbjct: 259 QSHTTSCI---------NTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKF-- 307

Query: 331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVD 390
              +PEG+  +  K+         DD+ FC +L +E+ V ++PG+A     ++R++FA  
Sbjct: 308 --VEPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATS 358

Query: 391 PYSLEECLDRIKSF 404
              L E LDRI+ F
Sbjct: 359 IERLTEALDRIEDF 372

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (367), Expect = 4e-40
 Identities = 80/400 (20%), Positives = 145/400 (36%), Gaps = 35/400 (8%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-KFNGYAPTAGLPLTRRAIAEYLS 91
           +E  V++L  G P     F     A EA   A+  +   N Y  T G P   + +A +  
Sbjct: 23  SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFG 78

Query: 92  RDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
             L  ++ P   V VT G   A+  A   L   G  +++  P F  YE            
Sbjct: 79  ELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVF 138

Query: 151 FDLLP----------DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
             L P             W++D  ++       T ALV+  P NP G V+S + L+ +A 
Sbjct: 139 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 198

Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVT 259
              +   + I DEVY  +V+     + +    G     LT+GS  K +   GW++GW   
Sbjct: 199 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWV-- 256

Query: 260 TDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319
             P  + +  + V +   +       A   ++     L       +        Q     
Sbjct: 257 LGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDH 316

Query: 320 YNKIKEIPCISCPHKPEGSMAVMLKL--------NLSLLDDIIDDIDFCFKLAKEESVII 371
             +  +   +     P+GS  ++  +        +L    D   D  F   + K + ++ 
Sbjct: 317 MIRSLQSVGLKP-LIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVA 375

Query: 372 LPGTAVG-------LKNWLRVTFAVDPYSLEECLDRIKSF 404
           +P +            +++R  F  D  +L+   ++++ +
Sbjct: 376 IPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKW 415

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score =  142 bits (359), Expect = 7e-39
 Identities = 71/412 (17%), Positives = 150/412 (36%), Gaps = 43/412 (10%)

Query: 29  DDEKNEKKVISLAMGDPTVHSCF---------HTTHVATEAVAEALLSEKFNGYAPTAGL 79
            +  N   +I + + +  +  CF         +    A +   E++ +E    +    GL
Sbjct: 30  HEVHNTNGIIQMGLAENQL--CFDLLESWLAKNPEAAAFKKNGESIFAELAL-FQDYHGL 86

Query: 80  PLTRRAIAEYLS--RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY 137
           P  ++A+ ++++  R       PN + +T+G T A +  +  L+ PG  +L+P P +P +
Sbjct: 87  PAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGF 146

Query: 138 ELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESL------ADQNTVALVIINPGNPCGNVY 190
           +    +R  +E+         G+++    +E         +     +++ NP NP G   
Sbjct: 147 DRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTM 206

Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM----------GVFGSTVPILTL 240
           +   L  L          +I+DE+Y    F    F+ +                  +  +
Sbjct: 207 TRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVV 266

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQP 300
            SLSK   +PG+R+G   + D   +    K+              +  +         + 
Sbjct: 267 YSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLS-------DKK 319

Query: 301 DEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL-NLSLLDDIIDDIDF 359
               +    +   +          +   ISC       +   + + +L   +    +++ 
Sbjct: 320 LTKNYIAENHKRLKQRQKKLVSGLQKSGISC-LNGNAGLFCWVDMRHLLRSNTFEAEMEL 378

Query: 360 CFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYS-LEECLDRIKSFYQRH 408
             K+  E  + I PG++       W RV FA  P   L+  + R+K+F   +
Sbjct: 379 WKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEY 430

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score =  130 bits (328), Expect = 1e-34
 Identities = 70/402 (17%), Positives = 135/402 (33%), Gaps = 34/402 (8%)

Query: 29  DDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEAL-----LSEKFNGYAPTAGLPLTR 83
              KN   VI + + +  +        +                +    +    GLP  R
Sbjct: 30  HPLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFR 89

Query: 84  RAIAEYLSR--DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--- 138
           +AIA+++ +      +  P  V +  G T A +  +  L+ PG   L+P P +P +    
Sbjct: 90  KAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDL 149

Query: 139 -LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT---VALVIINPGNPCGNVYSYQH 194
                 + I +        K     + +    A ++      L++ NP NP G       
Sbjct: 150 RWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDT 209

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--------ILTLGSLSKR 246
           L+ +    N+    ++ DE+Y   VF    FV +                +  + SLSK 
Sbjct: 210 LKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD 269

Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFK 306
             +PG+R+G   + +   +    K+              A  +         +     F 
Sbjct: 270 MGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSD-------EKFVDNFL 322

Query: 307 KTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL-NLSLLDDIIDDIDFCFKLAK 365
           +   +        +    E+  I C  K    +   + L  L        ++     +  
Sbjct: 323 RESAMRLGKRHKHFTNGLEVVGIKC-LKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIIN 381

Query: 366 EESVIILPGTAVGL--KNWLRVTFA-VDPYSLEECLDRIKSF 404
           +  + + PG++       W RV FA +D  +++  L RI+ F
Sbjct: 382 DVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF 423

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score =  129 bits (323), Expect = 5e-34
 Identities = 80/390 (20%), Positives = 140/390 (35%), Gaps = 27/390 (6%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEAL--LSEKFNGYAPTAGLPLTRRAIAEYLSR 92
             VISLA G P             +   E L   ++K   Y  T G    R A+A ++ +
Sbjct: 29  SDVISLAGGLPAPE--TFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEK 86

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
                ++  ++   +G  QA+D+   +   PG  I++  P +     +  +   E     
Sbjct: 87  RYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIP 146

Query: 153 LLPD----KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
           L          E  L+++     +  +   +    NP G   S    +KL E AN+   L
Sbjct: 147 LDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFL 206

Query: 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           ++ D  Y  L +  +P  P+  F     ++ LG+ SK  + PG+R+GW           +
Sbjct: 207 IVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFRIGWVAAHPHLIRKME 265

Query: 269 PKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IP 327
                            A               +    K +   K   D     ++E +P
Sbjct: 266 IAKQSIDLCTNTFGQAIAWKYVEN------GYLDEHIPKIIEFYKPRRDAMLEALEEYMP 319

Query: 328 CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWL 383
                 KPEG M V + L   +      D     + A  + V  +PG A  +    KN +
Sbjct: 320 EGVEWTKPEGGMFVRVTLPEGI------DTKLMMERAVAKGVAYVPGEAFFVHRDKKNTM 373

Query: 384 RVTFA-VDPYSLEECLDRIKSFYQRHAKQL 412
           R+ F  V   ++ E + R+    +   K++
Sbjct: 374 RLNFTYVPEETIREGVRRLAETIKEEMKRV 403

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score =  127 bits (320), Expect = 1e-33
 Identities = 83/398 (20%), Positives = 154/398 (38%), Gaps = 33/398 (8%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYL 90
            + K ++L  G P     +H    A  A+A A  S     N Y    G P   +A+++  
Sbjct: 24  AQYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLY 79

Query: 91  SRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149
           S+ +   + P   V VT G  +A+   +      G  +++  P F  YE          R
Sbjct: 80  SQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPR 139

Query: 150 HFDLLPDKG--------WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
              L P+K         W +D +++E+L ++ T  ++I  P NP G V     L+ +A  
Sbjct: 140 FIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANL 199

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTT 260
             K   L ++DEVY H+VF     + +    G     +T+GS  K + + GW++GW    
Sbjct: 200 CKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGP 259

Query: 261 DPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY 320
           +   +     V +            A  +         +  E +F      L    D   
Sbjct: 260 EAL-LKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMA 318

Query: 321 NKIKEIPCISCPHKPEGSMAVML-------KLNLSLLDDIIDDIDFCFKLAKEESVIILP 373
           + + E+     P  P+G   ++        K++L+   D   D  F   + K   +  +P
Sbjct: 319 SFLAEVGM--NPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIP 376

Query: 374 GTAVGL-------KNWLRVTFAVDPYSLEECLDRIKSF 404
            +A          ++++R  F     +L++  + ++ +
Sbjct: 377 PSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKW 414

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  117 bits (293), Expect = 6e-30
 Identities = 54/375 (14%), Positives = 108/375 (28%), Gaps = 41/375 (10%)

Query: 24  LMQSVDDEKNEKKVISLAMG---DPTVHSCFHTTHVATEAVAEAL-----LSEKFNGYAP 75
           LM+   ++    K ++L++G   +              +AVAEA           + Y P
Sbjct: 16  LMERFKEDPRSDK-VNLSIGLYYNEDGI------IPQLQAVAEAEARLNAQPHGASLYLP 68

Query: 76  TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGANILLPR 131
             GL   R AIA  L       L    V        +  + +         P + + +  
Sbjct: 69  MEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSD 128

Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL---ADQNTVALVIINPGNPCGN 188
           P +  +    A    EV  +    +    V  +D+ +        ++ L+     NP G 
Sbjct: 129 PTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGA 188

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP--MGVFGSTVPILTLGSLSKR 246
             +      + E     + +   D  Y     G +        +  + +P L   S SK 
Sbjct: 189 DLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKI 248

Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEV--F 304
           + + G R+G               + +           P  F    V ++L        +
Sbjct: 249 FSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASW 308

Query: 305 FKKTLNLLKQSVDICYNKIKEIPCISCPH-----KPEGSMAVMLKLNLSLLDDIIDDIDF 359
             +   +  + + +    +K +              +  M     L              
Sbjct: 309 LAEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGL----------SAAQ 358

Query: 360 CFKLAKEESVIILPG 374
             +L +E  V ++  
Sbjct: 359 VDRLREEFGVYLIAS 373

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score =  116 bits (291), Expect = 8e-30
 Identities = 75/377 (19%), Positives = 141/377 (37%), Gaps = 25/377 (6%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
             + + I+L+ G P     F       E +A  + ++  N YAP  G+   R AIA+   
Sbjct: 23  AQQHQAINLSQGFPD----FDGPRYLQERLAHHV-AQGANQYAPMTGVQALREAIAQKTE 77

Query: 92  RDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
           R   Y+    +D+ VT+G T+A+  A+  L R G  ++   P +  Y  + A     V+ 
Sbjct: 78  RLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKR 137

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
              L    + VD  +  +L  + T  +++  P NP   V+       L +     +  VI
Sbjct: 138 MA-LQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVI 196

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP 269
           +DEVY H+ F  +    +          + + S  K + + GW++G+ V   P     + 
Sbjct: 197 SDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRK 256

Query: 270 KVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCI 329
                              +  A P       + + +K                     +
Sbjct: 257 VHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQK---------RDILVNALNESRL 307

Query: 330 SCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRV 385
                 EG+  +++  +       +DD++FC  L +E  V  +P +           +R+
Sbjct: 308 EI-LPCEGTYFLLVDYS---AVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRL 363

Query: 386 TFAVDPYSLEECLDRIK 402
            FA    +L    +R++
Sbjct: 364 CFAKKESTLLAAAERLR 380

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  115 bits (288), Expect = 3e-29
 Identities = 51/368 (13%), Positives = 99/368 (26%), Gaps = 28/368 (7%)

Query: 24  LMQSVDDEKNEKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
           L      ++   K I+L +G                +A    L +E    Y    G+P  
Sbjct: 16  LADLFRADERPGK-INLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEF 74

Query: 83  RRAIAEYLSRDLPYKLTPND----VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE 138
            R   E L       +                  +       +     + +  P +P ++
Sbjct: 75  GRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHK 134

Query: 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESL---ADQNTVALVIINPGNPCGNVYSYQHL 195
                  +EVR +     +   +D D + +    A    V L      NP G   + +  
Sbjct: 135 SVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQW 194

Query: 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVP--MGVFGSTVPILTLGSLSKRWIVPGWR 253
           Q LA+ + +   L + D  Y     G +               ++   S SK + +   R
Sbjct: 195 QTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNER 254

Query: 254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD-----EVFFKKT 308
           +G                 +          +P     + V +IL         E      
Sbjct: 255 VGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDM 314

Query: 309 LNLLKQSVDICYNKIKEIPCISC--PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE 366
              +++   +  N ++E            +  M     L            +   +L +E
Sbjct: 315 RQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT----------KEQVLRLREE 364

Query: 367 ESVIILPG 374
             V  +  
Sbjct: 365 FGVYAVAS 372

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score =  114 bits (286), Expect = 5e-29
 Identities = 79/387 (20%), Positives = 155/387 (40%), Gaps = 34/387 (8%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +K   ++  L +G P       T  V  E + E     +   Y+ +AG+   R A A Y 
Sbjct: 24  KKRGVRIHHLNIGQPD----LKTPEVFFERIYENK--PEVVYYSHSAGIWELREAFASYY 77

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     + P +V VT+G ++AI  + A+++ PG  IL+  P +  Y   A    +++  
Sbjct: 78  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIP 137

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
                ++G+ +   ++ES  ++ T  +V+ NP NP G VY    ++ L E A +    +I
Sbjct: 138 VTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLI 196

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
            DEVY  +VF  +    + +    V ++   S+SK++   G R+G  +T +   +    K
Sbjct: 197 VDEVYSEIVFRGEFASALSIESDKVVVID--SVSKKFSACGARVGCLITRNEELISHAMK 254

Query: 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330
           + +       +    +  +     S      E + ++              K  E   + 
Sbjct: 255 LAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRER---------VETVLKKLEEHGLK 305

Query: 331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE-----ESVIILPGTAVGL-----K 380
              KP G+  +  +L       + D  +F   +  +     E+ ++ P     L     K
Sbjct: 306 RFTKPSGAFYITAEL------PVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGK 359

Query: 381 NWLRVTFAVDPYSLEECLDRIKSFYQR 407
             +R+   ++   L   +D +    + 
Sbjct: 360 KEIRIACVLEKDLLSRAIDVLMEGLKM 386

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score =  112 bits (279), Expect = 3e-28
 Identities = 89/378 (23%), Positives = 140/378 (37%), Gaps = 37/378 (9%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
                 ++L  G P+            EAV  AL   + + YAP AGLP  R A+AE   
Sbjct: 22  AQRLGAVNLGQGFPS----NPPPPFLLEAVRRAL--GRQDQYAPPAGLPALREALAEE-- 73

Query: 92  RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151
               + + P  V VTSG T+A+ V +  L  PG  +++  P F +Y   A     + R  
Sbjct: 74  ----FAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLV 129

Query: 152 DLLPDKGWEV-DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            L         DL  +E      T AL++  P NP G V+  + L+ +A  A      +I
Sbjct: 130 RLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLI 189

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DEVY  L +G++P             +      KR    G+R+GW V            
Sbjct: 190 SDEVYDELYYGERPRRLREFAPERTFTVGSAG--KRLEATGYRVGWIVGPKEFMPRLAGM 247

Query: 271 VVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCIS 330
                      L                   E F++      ++  D+    ++ +    
Sbjct: 248 RQWTSFSAPTPLQAGVAEALK------LARREGFYEALREGYRRRRDLLAGGLRAMGL-- 299

Query: 331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVT 386
             + PEG+  +M +L            D  F+L +E  V ++P +A  L    K+  R  
Sbjct: 300 RVYVPEGTYFLMAEL---------PGWD-AFRLVEEARVALIPASAFYLEDPPKDLFRFA 349

Query: 387 FAVDPYSLEECLDRIKSF 404
           F      L   L+R+   
Sbjct: 350 FCKTEEELHLALERLGRV 367

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score =  110 bits (274), Expect = 2e-27
 Identities = 56/374 (14%), Positives = 120/374 (32%), Gaps = 19/374 (5%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
            +V+ L++ D      F       E + + L  E   GY  T      ++ + +++    
Sbjct: 31  NEVVPLSVADME----FKNPPELIEGLKKYL-DETVLGY--TGPTEEYKKTVKKWMKDRH 83

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL-LPRPGFPIYELSAAFRHIEVRHFDL 153
            + +  + +  T+G   A+  A+   ++PG  ++ +    +P +          +    L
Sbjct: 84  QWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELL 143

Query: 154 LPDKGWEVDLDDIESL-ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
             D  + +D   +E L  D+N  AL+  +P NP G V+    LQK+ +   K   ++ +D
Sbjct: 144 EKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSD 203

Query: 213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272
           E++  L+               +   T+   +         +G           R+    
Sbjct: 204 EIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTK 263

Query: 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332
            R                       ++  +        + K    +        P I  P
Sbjct: 264 SRDATSGMPFTTLGYKACEICY---KECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP 320

Query: 333 HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVD 390
              EG+    +          +D       +  +  +    G   G     + R+  A  
Sbjct: 321 -LIEGTYLQWIDFR----ALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAP 375

Query: 391 PYSLEECLDRIKSF 404
              ++E L+R+   
Sbjct: 376 SSVIQESLERLNKA 389

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score =  110 bits (274), Expect = 3e-27
 Identities = 44/409 (10%), Positives = 106/409 (25%), Gaps = 46/409 (11%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPL 81
           L+    ++ + +K ++L +G      C          V + + +     + Y P  GL  
Sbjct: 20  LIADFREDPDPRK-VNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAE 78

Query: 82  TRRAIAEYLSRDLPYKL---------TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
            R   +     D    L         +           + +       +     + +  P
Sbjct: 79  FRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSP 138

Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEV----DLDDIESLADQNTVALVIINPGNPCGN 188
            +  +         +        D                 A + ++ ++     NP G 
Sbjct: 139 TWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGT 198

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSK 245
             + +  +++A    +       D  Y     G+       +         +    S SK
Sbjct: 199 DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSK 258

Query: 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD---- 301
            + +   R+G               + +  K       +P       V   L  P+    
Sbjct: 259 NFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHE 318

Query: 302 -EVFFKKTLNLLKQSVDICYNKIKEIPCISCPH--KPEGSMAVMLKLNLSLLDDIIDDID 358
                K   + +         +++ +      +    +  M     L          +  
Sbjct: 319 WTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL----------NPK 368

Query: 359 FCFKLAKEESVIILPG-----TAVGLKNWLRVTFAVDPYSLEECLDRIK 402
               L  ++ + +LP        +  KN   V  ++      E + +I+
Sbjct: 369 QVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIH-----EAVTKIQ 412

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score =  106 bits (264), Expect = 6e-26
 Identities = 62/401 (15%), Positives = 118/401 (29%), Gaps = 43/401 (10%)

Query: 24  LMQSVDDEKNEKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
           + ++   + N KK ++L +G     +   +  +   +A A     +    Y P AGL   
Sbjct: 18  VTEAFKRDTNSKK-MNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADF 76

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSG-----CTQAIDVAMALLSRPGANILLPRPGFPIY 137
            RA AE    +              G       +     +    +   ++ LP+P +  +
Sbjct: 77  TRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNH 136

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA---DQNTVALVIINPGNPCGNVYSYQH 194
                   ++++ +     K   +D            + ++ L+     NP G     + 
Sbjct: 137 TPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQ 196

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG---VFGSTVPILTLGSLSKRWIVPG 251
            ++LA    K   L   D  Y     GD               + ++   S +K   + G
Sbjct: 197 WKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYG 256

Query: 252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNL 311
            R G F     C    + K VE   K           +  A  + L        K+ L  
Sbjct: 257 ERAGAFTV--ICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVE 314

Query: 312 LKQSVDICYNK----IKEIPCISCPH-----KPEGSMAVMLKLNLSLLDDIIDDIDFCFK 362
           +K   D   +     +  +      H       +  M     L            +   +
Sbjct: 315 VKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK----------PEQVER 364

Query: 363 LAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIK 402
           L KE S+ +            R++ A V   ++      I 
Sbjct: 365 LTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIH 397

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score =  105 bits (261), Expect = 2e-25
 Identities = 47/413 (11%), Positives = 124/413 (30%), Gaps = 46/413 (11%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPL 81
           + Q    ++   K + L +G     +       + +A  + + ++    + Y    GLP 
Sbjct: 19  IKQRYGQDQRATK-VDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPS 77

Query: 82  TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL----SRPGANILLPRPGFPIY 137
                A+ +       L  + V      +    + ++        P   + L +P +  +
Sbjct: 78  LTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANH 137

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT---VALVIINPGNPCGNVYSYQH 194
                 + ++   +    ++   +DL+   +   +     + ++     NP G   + + 
Sbjct: 138 MAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQ 197

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVP------MGVFGSTVPILTLGSLSKRWI 248
             ++ +       + + D  Y     GD           +    +  P+    S +K   
Sbjct: 198 WVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAG 257

Query: 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL----GDPATFIQAAVPSILQQPD--- 301
           + G R+G F          K        +   I+     +P  +    V  +L+ P+   
Sbjct: 258 MYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTE 317

Query: 302 --EVFFKKTLNLLKQSVDICYNKIKEI--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDI 357
                     + + +      + + ++  P        +  M     L            
Sbjct: 318 QWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL----------TP 367

Query: 358 DFCFKLAKEESVIILPGTAVGLKNWLRVTFA-VDPYSLEECLDRIKSFYQRHA 409
               +L +  +V ++           R + A ++  ++E     I    + +A
Sbjct: 368 QMVKRLEETHAVYLVAS--------GRASIAGLNQGNVEYVAKAIDEVVRFYA 412

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score =  103 bits (256), Expect = 6e-25
 Identities = 51/371 (13%), Positives = 111/371 (29%), Gaps = 37/371 (9%)

Query: 24  LMQSVDDEKNEKKVISLAMG-------DPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT 76
           LM     +  + K I L +G          +            A    L +E    YA  
Sbjct: 16  LMGEFRADPRQGK-IDLGVGVYKDATGHTPIMRA------VHAAEQRMLETETTKTYAGL 68

Query: 77  AGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           +G P  ++A+ E +  D     T      V         + +A ++ P   + +  P +P
Sbjct: 69  SGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWP 128

Query: 136 IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL---ADQNTVALVIINPGNPCGNVYSY 192
            +     F  + V+ +     +   VD + +++    A +  + L+     NP G   + 
Sbjct: 129 NHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTL 188

Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFGSTVPILTLGSLSKRWIVP 250
               ++A    K   L + D  Y     G +        +      +L   S SK + + 
Sbjct: 189 DQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIY 248

Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD-----EVFF 305
             R G  +        R+                P       V ++L  P+         
Sbjct: 249 RERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAEL 308

Query: 306 KKTLNLLKQSVDICYNKIKEIPCISC--PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKL 363
           +   + + +  +    +++++              M   L              +   ++
Sbjct: 309 EAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT----------PEQVKRI 358

Query: 364 AKEESVIILPG 374
            +E  + ++  
Sbjct: 359 KEEFGIYMVGD 369

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score =  102 bits (253), Expect = 1e-24
 Identities = 63/374 (16%), Positives = 125/374 (33%), Gaps = 20/374 (5%)

Query: 38  ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK 97
           +   + D      F T     EA+ + L      GY+          AIA + S      
Sbjct: 2   LPFTISDMD----FATAPCIIEALNQRL-MHGVFGYSRWKNDEF-LAAIAHWFSTQHYTA 55

Query: 98  LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--LSAAFRHIEVRHFDLLP 155
           +    V         +   +   S  G  +++  P +  +   +    R +     +   
Sbjct: 56  IDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQA 115

Query: 156 DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
           D  +         LA      +++ +P NP G V++   L+ +A+   +    VI+DE++
Sbjct: 116 DGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIH 175

Query: 216 GHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM 275
             +V+G++P +P            L S SK + +P     + +  +          ++  
Sbjct: 176 MDMVWGEQPHIPWSNVARGDWA-LLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGR 234

Query: 276 KKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP 335
                      T   AA      Q    +       LK ++    +K+           P
Sbjct: 235 DGLSSPSVLALTAHIAA-----YQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIP 289

Query: 336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYS 393
           + +    L L        IDD      L ++E V I+PG   G   + ++R+        
Sbjct: 290 QSTYLAWLDLR----PLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSK 345

Query: 394 LEECLDRIKSFYQR 407
           LE+ +  + +  + 
Sbjct: 346 LEKGVAGLINAIRA 359

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 92.9 bits (229), Expect = 3e-21
 Identities = 66/393 (16%), Positives = 131/393 (33%), Gaps = 26/393 (6%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEAL--LSEKFNGYAPTAGLPLTRRAIAEYL 90
            +K  IS   G P     F    +A E   E +         Y+ T G P+ ++ I + L
Sbjct: 36  ADKDAISFGGGVPDP-ETFPRKELA-EIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLL 93

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R         D  + +  +Q     +  L     +  +      +  ++A  +++    
Sbjct: 94  ERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFV 153

Query: 151 FDLLPDKGWEVDL-------DDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
              L D G ++++        D      Q     V+ N  NP G   S +  + L E A 
Sbjct: 154 VVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAE 213

Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263
           K    ++ D+ YG L +  +   P+   G    ++ L +   + + PG R+G    +   
Sbjct: 214 KYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNT-FSKVLAPGLRIGMVAGSKEF 272

Query: 264 GMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI 323
                            I        +      L +  +   +         ++      
Sbjct: 273 IRKIVQAKQSADLCSPAIT--HRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYF 330

Query: 324 KEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---- 379
            +IP +    K EG + + L      L +  D  +   + AK + V  +PG    +    
Sbjct: 331 SDIPGVKW-VKSEGGLFIWLT-----LPEGFDTWEMF-EYAKRKKVFYVPGRVFKVYDEP 383

Query: 380 KNWLRVTFA-VDPYSLEECLDRIKSFYQRHAKQ 411
              +R++F       + E + R++     + K+
Sbjct: 384 SPSMRLSFCLPPDEKIVEGIKRLREVVLEYGKE 416

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 86.1 bits (212), Expect = 4e-19
 Identities = 46/362 (12%), Positives = 110/362 (30%), Gaps = 40/362 (11%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
            ++++    D        +       + E   +        +           ++L  D 
Sbjct: 11  LEILNEKGRDALYD---LSGLSGGFLIDEKDKALLNTYIGSSYFAEKVNEYGLKHLGGD- 66

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPIYELSAAFRHIEVRHFDL 153
                 +     +  + AI   +  L        LP  PG P  E   + + +  ++F+ 
Sbjct: 67  ----ENDKCVGFNRTSSAILATILALKPKKVIHYLPELPGHPSIE--RSCKIVNAKYFE- 119

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
             D      + +I +  D++T+ ++  +  +    V   ++ +K+  TA   + +V  D+
Sbjct: 120 -SD-----KVGEILNKIDKDTLVIITGSTMDL--KVIELENFKKVINTAKNKEAIVFVDD 171

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
             G  V       P    G               +V               +  K ++V+
Sbjct: 172 ASGARVRLLFNQPPALKLG-------------ADLVVTSTDKLMEGPRGGLLAGKKELVD 218

Query: 274 RMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC- 331
           ++         +    + A +   L+  +    +K     K        K+ +       
Sbjct: 219 KIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDD 278

Query: 332 ----PHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV-GLKNWLRVT 386
                ++   +  V+ ++      +I   I+  F L K   +I +    + G    LR+ 
Sbjct: 279 NINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRID 338

Query: 387 FA 388
             
Sbjct: 339 LT 340

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]} Length = 354

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

 Score = 60.9 bits (146), Expect = 7e-11
 Identities = 54/347 (15%), Positives = 108/347 (31%), Gaps = 36/347 (10%)

Query: 60  AVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID-VAMA 118
           AV   L  +  N Y       +     A+Y        + P  V V+ G  + I+ +  A
Sbjct: 40  AVEFQLTQQTLNRYPECQPKAV-IENYAQY------AGVKPEQVLVSRGADEGIELLIRA 92

Query: 119 LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178
                   IL   P + +Y +SA    +E R    L +   ++     +         + 
Sbjct: 93  FCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDK---LDGVKVVY 149

Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238
           + +P NP G + + Q  + L E       +V  +                      +   
Sbjct: 150 VCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAI--- 206

Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQ 298
            L +LSK + + G R G+    +   +    KV+                +       L 
Sbjct: 207 -LRTLSKAFALAGLRCGFT-LANEEVINLLMKVIAPYPLST--------PVADIAAQALS 256

Query: 299 QPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDID 358
               V  ++ +  +    +     +KEIPC+        +  ++ +              
Sbjct: 257 PQGIVAMRERVAQIIAEREYLIAALKEIPCVEQ-VFDSETNYILARF---------KASS 306

Query: 359 FCFKLAKEESVIILPGTAV-GLKNWLRVTFAVDPYSLEECLDRIKSF 404
             FK   ++ +I+        L   LR+T        +  +D +++ 
Sbjct: 307 AVFKSLWDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALRAE 352

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} Length = 391

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

 Score = 58.4 bits (140), Expect = 5e-10
 Identities = 54/356 (15%), Positives = 122/356 (34%), Gaps = 34/356 (9%)

Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA----MALLSRPGANI 127
           G+     + + R  IA+ +  D      P ++  TSG T++ ++A         + G +I
Sbjct: 43  GWQAEEAVDIARNQIADLVGAD------PREIVFTSGATESDNLAIKGAANFYQKKGKHI 96

Query: 128 LLPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186
           +  +     + +              L P +   +DL ++E+    +T+ + I++  N  
Sbjct: 97  ITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEI 156

Query: 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246
           G V     + ++      +   V A +  G L           +  S   I     +   
Sbjct: 157 GVVQDIAAIGEMCRARGII-YHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGAL 215

Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFK 306
           ++    R+         G  R  +           +G+     +  + + +++       
Sbjct: 216 YVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRG-LRN 274

Query: 307 KTLNLLKQSVDICYNKIKE-----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCF 361
           +  N +K   ++  N   E     I  +S  +    S+ + LK      D  +     C 
Sbjct: 275 RLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALK------DLAVSSGSACT 328

Query: 362 KLAKEESVIILPGTAVGL-----KNWLRVTFAVDPYSLEECLDRIKSFYQRHAKQL 412
             + E S ++    A+GL      + +R +     ++ EE +D      ++   +L
Sbjct: 329 SASLEPSYVL---RALGLNDELAHSSIRFSLG--RFTTEEEIDYTIELVRKSIGRL 379

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Length = 355

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

 Score = 58.2 bits (139), Expect = 6e-10
 Identities = 54/374 (14%), Positives = 122/374 (32%), Gaps = 41/374 (10%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
           +  +++  +                  A+ + L  +    Y P A      +A+A +   
Sbjct: 20  SPDQLLDFSANINP----LGMPVSVKRALIDNL--DCIERY-PDADYFHLHQALARH--- 69

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
              +++  + +   +G T++I              ++  PGF  Y  + A    E+R + 
Sbjct: 70  ---HQVPASWILAGNGETESI--FTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWS 124

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
           L    GW++  D I      +   L +  P NP G +     LQ +A+    L   +I D
Sbjct: 125 LREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILD 183

Query: 213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272
           E +   +  +  F+P       + +L   +                        R+ ++ 
Sbjct: 184 EAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMP 243

Query: 273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP 332
             +     +               +   D  + + T + L++     Y  + ++P ++  
Sbjct: 244 WSVNALAAL------------AGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTV- 290

Query: 333 HKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--LKNWLRVTFAVD 390
             P  +  ++L+          +DID   +L   + ++I            + RV     
Sbjct: 291 -YPGRANYLLLRCE-------REDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR-S 340

Query: 391 PYSLEECLDRIKSF 404
               E  L  +++ 
Sbjct: 341 AAQNERLLAALRNV 354

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Length = 334

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

 Score = 47.9 bits (112), Expect = 1e-06
 Identities = 45/385 (11%), Positives = 117/385 (30%), Gaps = 54/385 (14%)

Query: 20  MLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL 79
           +  +  ++   E  ++    LA+ +      F       + V   L S+    Y   +  
Sbjct: 4   LDLIAKRAYPYETEKRDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIY-YDSPD 58

Query: 80  PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL 139
                 I  YL       L+ N+V V +G  + I V M           L       +  
Sbjct: 59  EELIEKILSYLD---TDFLSKNNVSVGNGADEIIYVMM-----------LMFDRSVFFPP 104

Query: 140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
           + +   I  +       +        I  +       + I NP NP G+V+  + ++++ 
Sbjct: 105 TYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVGEGDVVFIPNPNNPTGHVFEREEIERIL 164

Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259
           +T   +              +       +        +  + + SK + +   R+G+ V 
Sbjct: 165 KTGAFVA--------LDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVA 216

Query: 260 TDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319
           ++             +  Y  +         + + + +       F++    + +  +  
Sbjct: 217 SEKF-----------IDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERM 265

Query: 320 YNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL 379
            + ++E+          G        N   +    ++ +   +  + ++V +        
Sbjct: 266 KSALREMGY--RITDSRG--------NFVFVFMEKEEKERLLEHLRTKNVAV-----RSF 310

Query: 380 KNWLRVTFAVDPYSLEECLDRIKSF 404
           +  +R+T        +  L  ++ F
Sbjct: 311 REGVRITIG-KREENDMILRELEVF 334

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} Length = 364

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 47.9 bits (112), Expect = 1e-06
 Identities = 46/373 (12%), Positives = 115/373 (30%), Gaps = 32/373 (8%)

Query: 52  HTTHVATEAVAEALLSEKFNGYAPTAGLP------LTRRAIAEYLSRDLPYKLTPNDVFV 105
            T    TE   +ALL E  +GY+            +    I +++   LP  L  +   V
Sbjct: 9   QTGGKLTEEARQALL-EWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARV 67

Query: 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDD 165
           T+G  +A    M  L++  A +++         ++A    + +          + +  ++
Sbjct: 68  TNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPEN 127

Query: 166 IESLADQNTVA-----LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220
                ++          +I  P    GN+   +    +A+  ++    ++ +  Y     
Sbjct: 128 FAQTIEETKKRGEVVLALITYPDGNYGNLPDVKK---IAKVCSEYDVPLLVNGAYAIGRM 184

Query: 221 GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD 280
                     F       ++             +G     +         V+ R +KY +
Sbjct: 185 PVSLKEIGADFIVGSGHKSMA--------ASGPIGVMGMKEE----WAEIVLRRSEKYKN 232

Query: 281 ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVD---ICYNKIKEIPCISCPHKPEG 337
              +           I         ++ +    + V+       +++++        P  
Sbjct: 233 KEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHN 292

Query: 338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRV-TFAVDPYSLEE 396
              +       L +         F L +E     + G   GL  + ++ T+ +    ++ 
Sbjct: 293 HDLMFFHAE-VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDY 351

Query: 397 CLDRIKSFYQRHA 409
            L+  K   ++++
Sbjct: 352 VLNAFKEIIEKYS 364

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]} Length = 340

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 22/109 (20%), Positives = 33/109 (30%), Gaps = 7/109 (6%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA 118
           + +A      +  GY   +      R I E L R         DV   SG TQ   +A +
Sbjct: 18  DLMARDN-MTQHAGYGQDSHCAKAARLIGELLERP------DADVHFISGGTQTNLIACS 70

Query: 119 LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167
           L  RP   ++  + G      + A      +        G     D   
Sbjct: 71  LALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIES 119

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]} Length = 376

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 25/152 (16%), Positives = 58/152 (38%), Gaps = 18/152 (11%)

Query: 59  EAVAEALLSEKFN-------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111
           E +      +  N       G      +   R  +A+ L         P+++F TS  T+
Sbjct: 19  EEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVS------PSEIFFTSCATE 72

Query: 112 AIDVAMALLSRPGANILLPRPGFPIYE--LSAAFRHIEVRHFDLL---PDKGWEVDLDDI 166
           +I+  +  ++             PI    +    +++ ++ F +     D    V L+++
Sbjct: 73  SINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEEL 132

Query: 167 ESLADQNTVALVIINPGNPCGNVYSYQHLQKL 198
           E L D++T  + I+   N  G +   + + ++
Sbjct: 133 EKLVDEDTFLVSIMAANNEVGTIQPVEDVTRI 164

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

 Score = 37.1 bits (85), Expect = 0.004
 Identities = 23/239 (9%), Positives = 57/239 (23%), Gaps = 32/239 (13%)

Query: 103 VFVTSGCTQAIDVAMALLSRPGANILLPRPGFP------IYELSAAFRHIEVRHFDLLPD 156
           V    G   A ++   L  +PG  +                  +      +  H   L  
Sbjct: 94  VPTHQG-RGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNL 152

Query: 157 K-GWEVDLDDIESLADQNT-----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
               ++DL+ + +L  +          + +      G   S  +++ + E A+     + 
Sbjct: 153 PFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIF 212

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLG----------SLSKRWIVPGWRLGWFVTT 260
            D                G    ++  +             S  K  +V           
Sbjct: 213 YDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGG------- 265

Query: 261 DPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDIC 319
                    ++    K+   +     ++   A   +      +        ++  V   
Sbjct: 266 --FLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQV 322

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	415
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	100.0
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.97
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.97
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.96
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.96
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.96
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.96
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.96
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.95
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.94
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.93
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.92
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.91
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.89
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.89
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.89
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.88
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.88
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.88
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.87
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.87
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.86
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.86
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.85
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.85
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.85
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.85
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.84
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.84
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.84
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.84
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.83
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.83
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.83
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.83
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.83
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.82
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.82
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.82
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.81
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.81
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.81
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.8
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.8
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.79
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.79
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.79
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.79
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.79
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.78
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.76
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.73
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.72
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.72
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.71
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.66
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.59
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.55
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.37
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.15
d1ofux_	119	Hypothetical protein PA3008 {Pseudomonas aeruginos	88.63
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	81.38

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=2.5e-61  Score=453.17  Aligned_cols=383  Identities=22%  Similarity=0.387  Sum_probs=336.6

Q ss_pred             CccccCCccCCcch-hhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCc
Q 014936            1 MEISNGGIDNTGSI-ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL   79 (415)
Q Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~   79 (415)
                      |++|+|...+.+|. ..+......+.      ..|+++|||+.|+|+    +++++.+++++++.++.+. .+|+++.|.
T Consensus         1 m~~~~~~~~~~~s~~~~i~~~a~~~~------~~g~~vi~l~~G~p~----~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~   69 (388)
T d1j32a_           1 MKLAARVESVSPSMTLIIDAKAKAMK------AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQGK-TRYGPAAGE   69 (388)
T ss_dssp             CCCCHHHHTSCCCSSTTTHHHHHHHH------TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCC
T ss_pred             CchhhHhhcCCcCHHHHHHHHHHHHH------HCCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCC
Confidence            89999999999993 22444443322      347899999999975    7888999999999988654 589999999


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (415)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  159 (415)
                      ++||+++++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|.+++.++...+++|
T Consensus        70 ~~lR~aia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~  149 (388)
T d1j32a_          70 PRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQF  149 (388)
T ss_dssp             HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTT
T ss_pred             HHHHHHHHHHHHHhcccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEeccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998888889


Q ss_pred             CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC--CCCe
Q 014936          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPI  237 (415)
Q Consensus       160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~  237 (415)
                      .+|++++++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++....++.....  .+++
T Consensus       150 ~~d~~~l~~~~~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~  229 (388)
T d1j32a_         150 KVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERS  229 (388)
T ss_dssp             CCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTE
T ss_pred             CCCHHHHHHhCCCCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccce
Confidence            99999999999999999999999999999999999999999999999999999999999998777666655432  2579


Q ss_pred             EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHH
Q 014936          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSV  316 (415)
Q Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  316 (415)
                      ++++||||.|+++|+|+||+++++        ++++.+.... .....++...|.++...+... ++++++.++.+++++
T Consensus       230 i~~~S~SK~~~~~GlRvG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~-~~~~~~~~~~~~~~~  300 (388)
T d1j32a_         230 VVCSGFAKTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERR  300 (388)
T ss_dssp             EEEEESTTTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHH
T ss_pred             eEecCChhhhhcchhHeEEEEECH--------HHHHHHHHhhhhccccccHHHHHHHhhcccch-HHHHHHHHHHHHHHH
Confidence            999999999999999999999865        6777766553 344677888888888888654 578999999999999


Q ss_pred             HHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHH
Q 014936          317 DICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       317 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~  396 (415)
                      +.+.+.|++++++. +..|++|+|+|++++...    .++.+++.++++++||.+.||..|+.++++|++++.+++++++
T Consensus       301 ~~~~~~l~~~~g~~-~~~p~gg~~l~~~l~~~~----~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~~~~e~l~~  375 (388)
T d1j32a_         301 RYMLDALNAMPGLE-CPKPDGAFYMFPSIAKTG----RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKR  375 (388)
T ss_dssp             HHHHHHHHTCTTCB-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHH
T ss_pred             HHHHHHHHhCCCCE-ecCCCceEEEEEECCCCC----CCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEeCCHHHHHH
Confidence            99999999988888 558999999999887532    3678899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRH  408 (415)
Q Consensus       397 ~l~~l~~~~~~~  408 (415)
                      ++++|+++++.+
T Consensus       376 al~rl~~~l~~l  387 (388)
T d1j32a_         376 GMERLEKFLHGI  387 (388)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3e-59  Score=438.65  Aligned_cols=376  Identities=24%  Similarity=0.401  Sum_probs=320.8

Q ss_pred             ccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHH
Q 014936            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (415)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~   81 (415)
                      .+|+|...++||  .+........+..   .+|.++|+|+.|+|+    +++++.+++++.+++..+. .+|+++.|.++
T Consensus         3 ~~~~r~~~~~~s--~~~~i~~~a~~~~---~~G~~vi~l~~g~p~----~~~p~~i~~a~~~~~~~~~-~~Y~~~~G~~~   72 (382)
T d1b5pa_           3 GLSRRVQAMKPS--ATVAVNAKALELR---RQGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPE   72 (382)
T ss_dssp             CCCHHHHHCCCC--HHHHHHHHHHHHH---HTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHH
T ss_pred             HHHHHHHhCCCC--HHHHHHHHHHHHH---hCCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCCCCHH
Confidence            478899999999  5555555444333   458899999999975    7889999999999988654 58999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCC
Q 014936           82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (415)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (415)
                      ||+++++++++.++.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.++..++..+++++.+
T Consensus        73 lR~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  152 (382)
T d1b5pa_          73 LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVP  152 (382)
T ss_dssp             HHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC
T ss_pred             HHHHHHhhhhhhcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999888788999


Q ss_pred             ChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936          162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (415)
Q Consensus       162 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (415)
                      |++++++.++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++....+...  ..+++++++
T Consensus       153 d~~~l~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~  230 (382)
T d1b5pa_         153 DPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVN  230 (382)
T ss_dssp             CHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT--CTTTEEEEE
T ss_pred             CHHHHHHhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHc--CCCCEEEEe
Confidence            999999999999999999999999999999999999999999999999999999999998766555433  346899999


Q ss_pred             cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHHH
Q 014936          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~  318 (415)
                      |+||.|+++|+|+||+++++        ++++.+.... .....++...|.++...+....  +.+++..++.++++++.
T Consensus       231 s~SK~~~~~GlR~G~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (382)
T d1b5pa_         231 GAAKAFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDL  302 (382)
T ss_dssp             ESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhccCcHhheEEEEECH--------HHHHHHHHHHHhcccCcccccccccccccccccchhHHHHHHHHHHHhhhhH
Confidence            99999999999999999865        6777776553 3345667777777766665422  46677788888999999


Q ss_pred             HHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHH
Q 014936          319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECL  398 (415)
Q Consensus       319 l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l  398 (415)
                      +.+.+... ++. +..|++|+|+|++++...    .+...+.. ++.++||.+.||+.|+.++++||+++.+++++++++
T Consensus       303 ~~~~l~~~-g~~-~~~p~gg~~~~~~~~~~~----~~~~~~~~-~l~e~gV~v~PG~~F~~~~~iRis~~~~~e~l~~al  375 (382)
T d1b5pa_         303 LLEGLTAL-GLK-AVRPSGAFYVLMDTSPIA----PDEVRAAE-RLLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKAL  375 (382)
T ss_dssp             HHHHHHHH-TCC-BCCCSBTTEEEEECTTTC----SSHHHHHH-HHHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHH
T ss_pred             HHHHHhhc-CCe-EecCCceEEEeEeCCCCC----CCHHHHHH-HHHHCCEEEEeCcccCCCCeEEEEEcCCHHHHHHHH
Confidence            99999887 677 558999999999986421    24445544 456779999999999999999999998999999999


Q ss_pred             HHHHHH
Q 014936          399 DRIKSF  404 (415)
Q Consensus       399 ~~l~~~  404 (415)
                      ++|+++
T Consensus       376 ~rl~~~  381 (382)
T d1b5pa_         376 ERFARV  381 (382)
T ss_dssp             HHGGGG
T ss_pred             HHHHHh
Confidence            999875

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=4.9e-58  Score=431.68  Aligned_cols=391  Identities=29%  Similarity=0.487  Sum_probs=327.3

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |+.|+|+.+. +.  .+++.+....+-.   +.|.++|+|+.|+|... ++++++.+++++.+++..+ .+.|+++.|.+
T Consensus         2 ~~~s~r~~~~-~~--~ir~i~~~a~~l~---~~G~~vi~l~~G~P~~~-df~~p~~i~~a~~~a~~~~-~~~Y~~~~G~~   73 (395)
T d1xi9a_           2 IRASKRALSV-EY--AIRDVVLPARELE---KKGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLP   73 (395)
T ss_dssp             CCCCHHHHTC-CC---------CHHHHH---HTTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred             ccchhccccC-cH--HHHHHHHHHHHHH---HCCCCeEECCCCCCCCC-CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence            5778888886 44  6888775433322   45889999999998533 4889999999999998764 45799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      +||++|++++++.+|..+++++|++|+|+++++.+++.+++++||+|++++|+|+.+...++..|.+++.++...+++|.
T Consensus        74 ~LR~aia~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~  153 (395)
T d1xi9a_          74 ELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQ  153 (395)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSE
T ss_pred             HHHHHHHHhhhhcccccccccccccccccchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEecccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987778899


Q ss_pred             CChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (415)
Q Consensus       161 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (415)
                      +|++++++.+.++++++++++||||||.+++.+++++|+++|+++++++|.||+|.++.+++... +...+...+++|++
T Consensus       154 ~d~~~~~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~vi~~  232 (395)
T d1xi9a_         154 PDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI-SPGSLTKDVPVIVM  232 (395)
T ss_dssp             ECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC-CHHHHCSSSCEEEE
T ss_pred             chHHHHHHhhcccccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEecccccccccccccc-chhhcCCCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999988875443 33445556789999


Q ss_pred             ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHH
Q 014936          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICY  320 (415)
Q Consensus       241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~  320 (415)
                      +||||.|+++|+|+||+++++.....  ..+.+...........++.++|.++..++... ++++++.++.++++++.+.
T Consensus       233 ~S~SK~~~~~GlRvG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~  309 (395)
T d1xi9a_         233 NGLSKVYFATGWRLGYMYFVDPENKL--SEVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIY  309 (395)
T ss_dssp             EESTTTTCCGGGCCEEEEEECTTCTT--HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHH
T ss_pred             eCcchhcccchhhcEeeEecCHHHHH--HHHHHHHHHhhcCCCCcCHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999876543222  12223222223334667888999888888753 4789999999999999999


Q ss_pred             HHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHH
Q 014936          321 NKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECL  398 (415)
Q Consensus       321 ~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l  398 (415)
                      +.|++++++. +..|++|+|+|++++...   ..++.+++.++++++||.+.||..|+.  ++++||+++.+++++++++
T Consensus       310 ~~L~~~~~~~-~~~p~gg~~~~~~l~~~~---~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~~~~e~l~eal  385 (395)
T d1xi9a_         310 KRLNEIPGIS-TTKPQGAFYIFPKIEVGP---WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAM  385 (395)
T ss_dssp             HHHHTSTTEE-CCCCCBSSEECCEECSCS---CSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHH
T ss_pred             HHHHhCCCce-ecCCCeeEEEeEECCCCC---CCCHHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEecCCHHHHHHHH
Confidence            9999987677 558999999999987532   136788999999999999999999976  6899999998999999999


Q ss_pred             HHHHHHHHH
Q 014936          399 DRIKSFYQR  407 (415)
Q Consensus       399 ~~l~~~~~~  407 (415)
                      ++|++++++
T Consensus       386 ~rl~~~l~e  394 (395)
T d1xi9a_         386 DRFEKFMKE  394 (395)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999999875

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=2.2e-57  Score=430.41  Aligned_cols=386  Identities=33%  Similarity=0.574  Sum_probs=326.4

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC-
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL-   94 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-   94 (415)
                      +++.+++.+..+    .+++++|+|+.|+|+..+...+.+.+++++++.+.....++|++..|.++||++||+|+++.+ 
T Consensus        15 pir~~~~~~~~~----~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~   90 (412)
T d1bw0a_          15 PIRTVSDNAKPS----PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFV   90 (412)
T ss_dssp             HHHHHHHTCCCC----CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCCC----CCCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcC
Confidence            566666544322    457889999999998766667789999999998887667789999999999999999998764 


Q ss_pred             -----CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936           95 -----PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus        95 -----~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                           +..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++++++|..+++.+++.
T Consensus        91 ~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~l~~~  170 (412)
T d1bw0a_          91 HKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRL  170 (412)
T ss_dssp             CSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHH
T ss_pred             cccccCCCCCCCeEEEecccccchhhhhhhhhccccceeeeeccchhhhhhhhccCccccccccccccccchhhHHHHhh
Confidence                 445889999999999999999999999999999999999999999999999999999998888889999999999


Q ss_pred             cCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc----ccCCCCCeEEEccCcc
Q 014936          170 ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG----VFGSTVPILTLGSLSK  245 (415)
Q Consensus       170 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~----~~~~~~~~i~~~s~sK  245 (415)
                      ..+.++++++++||||||.+++.+++++|+++|++++++||+||+|..+.+++..+.+..    ......++++++|+||
T Consensus       171 ~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK  250 (412)
T d1bw0a_         171 KDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAK  250 (412)
T ss_dssp             CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTT
T ss_pred             hhccccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCc
Confidence            999999999999999999999999999999999999999999999999999876543322    2233456899999999


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE  325 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  325 (415)
                      .|+++|+|+||+++++....  .+.++............++...|.++...+....++++.+.+++++++++.+.+.|.+
T Consensus       251 ~~~~~G~RvG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~  328 (412)
T d1bw0a_         251 NLVVPGWRLGWLLYVDPHGN--GPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGE  328 (412)
T ss_dssp             TTSCGGGCCEEEEEECTTCS--CHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCccCCCCcccccccchhhc--chhhhhhhccccccccCCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHH
Confidence            99999999999999764321  2234444444433344555556665555555555789999999999999999999988


Q ss_pred             CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHHHH
Q 014936          326 IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       326 ~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~~~  405 (415)
                      .+++. +..|++|+|+|++++.....+..++.+++.++++++||.+.||+.|+.++++||+++.+++++++++++|++++
T Consensus       329 ~~g~~-~~~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~~~~e~l~eal~Rl~~~l  407 (412)
T d1bw0a_         329 CIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVEVYREAVERIKAFC  407 (412)
T ss_dssp             STTEE-ECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred             hcCce-ecCCCCceEEEEeCChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence            77888 55899999999999866555556789999999999999999999999999999999999999999999999998


Q ss_pred             HHH
Q 014936          406 QRH  408 (415)
Q Consensus       406 ~~~  408 (415)
                      +++
T Consensus       408 ~~~  410 (412)
T d1bw0a_         408 QRH  410 (412)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            875

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=1.8e-57  Score=427.90  Aligned_cols=378  Identities=25%  Similarity=0.433  Sum_probs=324.8

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l   82 (415)
                      +|.|+....+|  .|+++++...       +.+++|+|+.|+|+    +++++.+++++.+++..+ ..+|+++.|.++|
T Consensus         2 ~s~~~~~~~~s--~ir~~~~~~~-------~~~dvi~l~~g~p~----~~~p~~v~~~~~~a~~~~-~~~Y~~~~G~~~l   67 (388)
T d1gdea_           2 LSDRLELVSAS--EIRKLFDIAA-------GMKDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLEL   67 (388)
T ss_dssp             HHHHHHHSCCC--HHHHHHHHHH-------HCTTCEECCCCSCC----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHH
T ss_pred             hhhhhhhCCcc--HHHHHHHHHh-------CCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcC-ccCCCCCcCCHHH
Confidence            46677777888  7888776322       24678999999975    788999999999998864 3589999999999


Q ss_pred             HHHHHHHHhhhCCC-CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCC
Q 014936           83 RRAIAEYLSRDLPY-KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (415)
Q Consensus        83 r~~ia~~~~~~~~~-~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (415)
                      |++||+|+++..+. ...+++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+++++|.+
T Consensus        68 r~aia~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  147 (388)
T d1gdea_          68 REAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRL  147 (388)
T ss_dssp             HHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCC
T ss_pred             HHHHHHHHHhhccccCCChheeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCC
Confidence            99999999875553 45667899999999999999999999999999999999999999999999999999988888999


Q ss_pred             ChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEE
Q 014936          162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTL  240 (415)
Q Consensus       162 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~  240 (415)
                      |+++|++.++++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+.+....++..+.. .+++|++
T Consensus       148 d~~~l~~~~~~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~  227 (388)
T d1gdea_         148 NVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITV  227 (388)
T ss_dssp             CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEE
T ss_pred             CHHHHHHhCccCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEE
Confidence            999999999999999999999999999999999999999999999999999999999988777766666644 3579999


Q ss_pred             ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHH
Q 014936          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~  318 (415)
                      +||||.|+++|+|+||+++++        ++...+.... ....+++...|.++..++++.. ..++++.++.+++++..
T Consensus       228 ~S~SK~~~~~GlR~G~ii~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  299 (388)
T d1gdea_         228 NGFSKTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKL  299 (388)
T ss_dssp             EESTTTTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eCChhhccCccccEEEEEeec--------cchhhhhhccccccccccccchhhHHHHHhhccchhHHHHHHHHHHHhhhh
Confidence            999999999999999999975        5666666653 3456777888888888887633 35567788888899999


Q ss_pred             HHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHH
Q 014936          319 CYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEE  396 (415)
Q Consensus       319 l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~  396 (415)
                      +.+.+... ++. +..|++|+|+|++++...    .++.+++..+++++||.+.||..|+.  ++++||+++.+++++++
T Consensus       300 ~~~~l~~~-~~~-~~~p~gg~fl~~~l~~~~----~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~~~~e~l~~  373 (388)
T d1gdea_         300 VWKRLNEM-GLP-TVKPKGAFYIFPRIRDTG----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEE  373 (388)
T ss_dssp             HHHHHHHT-TCC-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHH
T ss_pred             hhhhhhhc-ccc-ccCCCceEEEEEECCCCC----CCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEEecCCHHHHHH
Confidence            99999887 566 448999999999987532    26788899999999999999999976  68999999989999999


Q ss_pred             HHHHHHHHHHHH
Q 014936          397 CLDRIKSFYQRH  408 (415)
Q Consensus       397 ~l~~l~~~~~~~  408 (415)
                      ++++|+++++++
T Consensus       374 al~rL~~~l~e~  385 (388)
T d1gdea_         374 AMDRMERVLKER  385 (388)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhc
Confidence            999999998864

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.3e-55  Score=411.47  Aligned_cols=373  Identities=26%  Similarity=0.394  Sum_probs=319.6

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l   82 (415)
                      +|+|....+.|  .+..+.....+..   ++|+++|||+.|+|+    +++++.+++++.+.+..+. .+|+++.|.++|
T Consensus         1 ~~~r~~~~~~~--~~~~~~~~a~~~~---~~G~~vI~l~~G~p~----~~~p~~i~~~~~~~~~~~~-~~Y~~~~G~~~l   70 (375)
T d1o4sa_           1 VSRRISEIPIS--KTMELDAKAKALI---KKGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYEL   70 (375)
T ss_dssp             CCHHHHHSCCC--SSHHHHHHHHHHH---HTTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHH
T ss_pred             CchhhhhCCCC--HHHHHHHHHHHHH---HCCCCeEECCCcCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCcCCHHH
Confidence            46777777777  3333333222222   458889999999975    7788999999999887654 589999999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  162 (415)
                      |+++++++++.++..++++++++|+|+++++..++.+++++||.|++++|+|+.+...+...|.....++...++++.++
T Consensus        71 R~aia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (375)
T d1o4sa_          71 REGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPS  150 (375)
T ss_dssp             HHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCC
T ss_pred             HHHHHhhhhhccccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccch
Confidence            99999999998999999999999999999999999999999999999999999999999999999999888888888899


Q ss_pred             hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (415)
Q Consensus       163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  242 (415)
                      .+.++....++++++++++||||||.+++.+++++|+++|++|+++||+||+|.++.+++.....+...+..+++++++|
T Consensus       151 ~~~~~~~~~~~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S  230 (375)
T d1o4sa_         151 LEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYING  230 (375)
T ss_dssp             HHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEE
T ss_pred             hHHHHHhhccCccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEee
Confidence            99999998889999999999999999999999999999999999999999999999887766665555666789999999


Q ss_pred             CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHH
Q 014936          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYN  321 (415)
Q Consensus       243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  321 (415)
                      +||.|+++|+|+||+++++        +.++.+.... ......+...+......++..    .....+.++++++.+.+
T Consensus       231 ~SK~~~l~G~R~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~r~~~~~~  298 (375)
T d1o4sa_         231 FSKSHSMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVE  298 (375)
T ss_dssp             STTTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHH
T ss_pred             chhhccCCccccccccccc--------cchhhhhhhhccccccccccchhhhhhhcccc----hhhhHHHHHHHHHHHHH
Confidence            9999999999999999876        5666665553 334456666777776666543    44556778888999999


Q ss_pred             HhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHH
Q 014936          322 KIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRI  401 (415)
Q Consensus       322 ~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l  401 (415)
                      .|++. ++. +..|++|+|+|++++.       ++.+++.++++++||.+.||+.|+.++||||+++.+++++++++++|
T Consensus       299 ~l~~~-g~~-~~~p~gg~f~~~~~~~-------~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~~~~e~l~~al~rl  369 (375)
T d1o4sa_         299 RLKKM-GVK-FVEPEGAFYLFFKVRG-------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRI  369 (375)
T ss_dssp             HHHHT-TCC-CCCCSBSSEEEEECSS-------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHH
T ss_pred             HHHhc-Cce-EecCCccEEEEEECCC-------CHHHHHHHHHHhCCEEEEEccccCCCCeEEEEEcCCHHHHHHHHHHH
Confidence            99887 788 5589999999999874       57889999999999999999999999999999998999999999999


Q ss_pred             HHHHH
Q 014936          402 KSFYQ  406 (415)
Q Consensus       402 ~~~~~  406 (415)
                      +++++
T Consensus       370 ~~~l~  374 (375)
T d1o4sa_         370 EDFLN  374 (375)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            99874

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=6.7e-54  Score=406.76  Aligned_cols=382  Identities=22%  Similarity=0.344  Sum_probs=320.0

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCC
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAG   78 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g   78 (415)
                      |.+++|-.++++|  ...++..     .   +.+.++|||+.|+|+    +++++.+++++++++...  ..++|+++.|
T Consensus         2 ~~~~~~~~~~~~~--~~~~~~~-----~---~~~~~~I~L~~G~Pd----~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G   67 (418)
T d2r5ea1           2 FDLPKRYQGSTKS--VWVEYIQ-----L---AAQYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFG   67 (418)
T ss_dssp             CCCCGGGTTCCCC--HHHHHHH-----H---HHHHCCEECSSSCCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCTTC
T ss_pred             CchhhhhcCCCCC--HHHHHHH-----H---hcCCCCEEccCCCCC----CCCCHHHHHHHHHHHhCCCccCcCCCCCCC
Confidence            6688888898888  4444432     1   113467999999975    677899999999998754  2457999999


Q ss_pred             cHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCC
Q 014936           79 LPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (415)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~  157 (415)
                      .++||++||+|+++++|..+.+ ++|++|+|+++++..++.+++++||.|++++|+|+.+...+...|.+++.++++++.
T Consensus        68 ~~~lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~  147 (418)
T d2r5ea1          68 HPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNK  147 (418)
T ss_dssp             CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESC
T ss_pred             CHHHHHHHHHHHHHHhCCCCCccceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEEEecccc
Confidence            9999999999999999988885 899999999999999999999999999999999999999999999999999886543


Q ss_pred             C--------CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc
Q 014936          158 G--------WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG  229 (415)
Q Consensus       158 ~--------~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~  229 (415)
                      .        +..+.+.+.......++++++++||||||.+++.+++++|+++|+++++++|+||+|..+.+++....++.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~  227 (418)
T d2r5ea1         148 TGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRIC  227 (418)
T ss_dssp             CSSCEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred             cccchhhhhhhhhHHHHhhhhhccccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCcccccc
Confidence            2        45678888888888899999999999999999999999999999999999999999999998876665555


Q ss_pred             ccC-CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCC------Cc
Q 014936          230 VFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQ------PD  301 (415)
Q Consensus       230 ~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~------~~  301 (415)
                      .+. ...+++++.|+||.|+++|+|+||+++++        ++++.+.... ......+++.|.++...+..      ..
T Consensus       228 ~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~--------~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~  299 (418)
T d2r5ea1         228 TLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE--------ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSP  299 (418)
T ss_dssp             GSTTTGGGEEEEEEHHHHTTCGGGCCEEEESCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTST
T ss_pred             ccccccceeeeeecCCccccCCCcccccccccc--------hhhhhhhhcccccccccccchhhhccccccccccccccc
Confidence            543 34689999999999999999999999975        6777777653 34456677777777665532      22


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc-------CCCCCHHHHHHHHHhhcCeEEEcC
Q 014936          302 EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL-------DDIIDDIDFCFKLAKEESVIILPG  374 (415)
Q Consensus       302 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~-------~~~~~~~~~~~~ll~~~gi~v~~g  374 (415)
                      +.++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++....       ....++.+++..+++++||.+.||
T Consensus       300 ~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG  377 (418)
T d2r5ea1         300 ECYFNSISGELMAKRDYMASFLAEV-GMN-PTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPP  377 (418)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHT-TCE-EEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCG
T ss_pred             hhhHHHHHHHHHHhhhhHHhhHhhc-CCc-ccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCc
Confidence            4688999999999999999999998 888 5689999999998854211       122357789999999999999999


Q ss_pred             CCCCC-------CCeEEEEeeCChhhHHHHHHHHHHHHH
Q 014936          375 TAVGL-------KNWLRVTFAVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       375 ~~~~~-------~~~iRi~~~~~~~~l~~~l~~l~~~~~  406 (415)
                      +.|+.       +++||||++.++++|++++++|++++.
T Consensus       378 ~~F~~~~~~~~g~~~iRis~~~~~e~l~~a~~rl~~~lg  416 (418)
T d2r5ea1         378 SAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEILRKWKG  416 (418)
T ss_dssp             GGGSCGGGHHHHTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred             hhhCCCCCccCCCCEEEEEecCCHHHHHHHHHHHHHHHc
Confidence            99875       478999998899999999999998763

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.1e-52  Score=395.22  Aligned_cols=377  Identities=23%  Similarity=0.333  Sum_probs=314.7

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~l   82 (415)
                      +|+|+..+.+|  +|+++.....+..   ..|.++|+|+.|+|+    +++++.+++++.+...  ....|+++.|.++|
T Consensus         1 ~~~r~~~~~~~--~i~~l~~~a~~~~---~~g~~vi~l~~G~p~----~~~p~~~~~al~~~~~--~~~~Y~~~~G~~~L   69 (389)
T d2gb3a1           1 FSDRVLLTEES--PIRKLVPFAEMAK---KRGVRIHHLNIGQPD----LKTPEVFFERIYENKP--EVVYYSHSAGIWEL   69 (389)
T ss_dssp             CCHHHHSCCCC--TTGGGHHHHHHHH---HTTCEEEECSSCCCC----SCCCTHHHHHHHHTCC--SSCCCCCTTCCHHH
T ss_pred             CChhhhcCCCC--HHHHHHHHHHHHH---HcCCCEEECCCCCCC----CCCCHHHHHHHHhcCC--CCCCCCCCcCCHHH
Confidence            47888888899  5666554322222   348899999999986    7778989999987543  45689999999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  162 (415)
                      |+++|+|+++.+|..+++++|++|+|+++++..++.+++++||.|+++.|+|+.+...+...|..+..++.+.+. +..+
T Consensus        70 R~aia~~~~~~~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~  148 (389)
T d2gb3a1          70 REAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEE-GFAI  148 (389)
T ss_dssp             HHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGG-TSCC
T ss_pred             HHHHHHHHHHhcCCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCcccccccccccc-ccch
Confidence            999999999999999999999999999999999999999999999999999999999999999999988875433 3445


Q ss_pred             hhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEcc
Q 014936          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (415)
Q Consensus       163 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  242 (415)
                      .+.+.....++++++++++||||||.+++.+++++|+++|+++++++|+||+|..+.+++.......  ...++++++.|
T Consensus       149 ~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~--~~~~~~~v~~s  226 (389)
T d2gb3a1         149 PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALS--IESDKVVVIDS  226 (389)
T ss_dssp             CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGG--SCCTTEEEEEE
T ss_pred             hhhhhhhcccCccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccc--ccccccccccc
Confidence            6667777788899999999999999999999999999999999999999999999998876544332  23457888999


Q ss_pred             CccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNK  322 (415)
Q Consensus       243 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  322 (415)
                      +||.++++|+|+||+++++       +.+.+............+...+.++..++.. .+.++++.++.++++++.+.+.
T Consensus       227 ~sK~~~~~GlRiG~~~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~  298 (389)
T d2gb3a1         227 VSKKFSACGARVGCLITRN-------EELISHAMKLAQGRLAPPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKK  298 (389)
T ss_dssp             STTTTTCGGGCCEEEECSC-------HHHHHHHHHHHHHSCCCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCcccceeeeeccc-------hhHHHHHhhhhhccccccccccccccccccc-cchhcccccccccccchhhhhh
Confidence            9999999999999999876       1345444444444556677777777777754 4688999999999999999999


Q ss_pred             hhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhh-----cCeEEEcCCCCCC-----CCeEEEEeeCChh
Q 014936          323 IKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKE-----ESVIILPGTAVGL-----KNWLRVTFAVDPY  392 (415)
Q Consensus       323 l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~-----~~~iRi~~~~~~~  392 (415)
                      |+++++.. +..|.+|+|+|++++.      .++.+++..++++     .||.+.||+.|+.     ++++||+++.+++
T Consensus       299 L~~~~~~~-~~~p~~g~~~~~~lp~------~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~~~~~  371 (389)
T d2gb3a1         299 LEEHGLKR-FTKPSGAFYITAELPV------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKD  371 (389)
T ss_dssp             HHHTTCCC-BCCCSBSSEEEEECSS------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHH
T ss_pred             hhhhcccc-ccCCCceEEEEEeCCC------CCHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEcCCHH
Confidence            99985555 5589999999999975      3678888888765     4789999998764     5799999998999


Q ss_pred             hHHHHHHHHHHHHHHH
Q 014936          393 SLEECLDRIKSFYQRH  408 (415)
Q Consensus       393 ~l~~~l~~l~~~~~~~  408 (415)
                      ++++++++|.++++++
T Consensus       372 ~l~~a~~~L~~~lk~f  387 (389)
T d2gb3a1         372 LLSRAIDVLMEGLKMF  387 (389)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999999875

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=3.3e-52  Score=392.00  Aligned_cols=357  Identities=17%  Similarity=0.274  Sum_probs=295.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      .|+++++|+.|+|+    +++++.+++++.++++.+. ++|++  |.++||++||+|+++.+|..+++++|++|+|++++
T Consensus        29 ~g~~vi~l~~g~pd----f~~p~~v~~al~~~~~~~~-~~Y~~--g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G~~~a  101 (394)
T d1c7na_          29 VGNEVVPLSVADME----FKNPPELIEGLKKYLDETV-LGYTG--PTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPA  101 (394)
T ss_dssp             CCTTCCCCCSSSCS----SCCCHHHHHHHHHHHHHCC-CSSBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHH
T ss_pred             cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCC-cCCCC--CCHHHHHHHHHHHHHhcCCCCCCcceEeeccchhh
Confidence            47889999999975    8899999999999988653 47864  67999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC-CCCCCCChhHHHhhcC-CCceEEEecCCCCccccCC
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVY  190 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~  190 (415)
                      +..++++++++||.|+++.|.|+++...+...|...+.++... +..+.+|.+.++.... ++++++++++||||||.++
T Consensus       102 l~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPTG~v~  181 (394)
T d1c7na_         102 VFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVW  181 (394)
T ss_dssp             HHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCC
T ss_pred             hhhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEecccccccceec
Confidence            9999999999999999999999999999999999988777543 3446678888887664 4689999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccC--CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh
Q 014936          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG--STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (415)
Q Consensus       191 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~  268 (415)
                      +.+++++|+++|++++++||+||+|.++.+++....+.....  ..++++++.|+||.|+++|+|+||+++++       
T Consensus       182 s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~-------  254 (394)
T d1c7na_         182 KKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------  254 (394)
T ss_dssp             CHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------
T ss_pred             cHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccC-------
Confidence            999999999999999999999999999998876655443332  23578999999999999999999999976       


Q ss_pred             HHHHHHHHhhcccc-CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecC
Q 014936          269 PKVVERMKKYFDIL-GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLN  346 (415)
Q Consensus       269 ~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~  346 (415)
                      +.+.+.+....... ..+....+.++........+.+.++.++.++++++.+.+.++. .+++. +..|++|+|+|++++
T Consensus       255 ~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~p~g~~~~~~~~~  333 (394)
T d1c7na_         255 PDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDFR  333 (394)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEECG
T ss_pred             hhhhhhhhhhhhhccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhcccccee-ecCCCceeEEEEECC
Confidence            24666665554322 2333333333333332233578888889999999999988885 56777 447899999999987


Q ss_pred             ccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHH
Q 014936          347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ...    .++.+++..+++++||.+.||+.|+.  ++++|||++.+++++++++++|+++++++
T Consensus       334 ~~~----~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~~~~e~i~eal~rl~~~l~~L  393 (394)
T d1c7na_         334 ALK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDL  393 (394)
T ss_dssp             GGC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCC----CCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence            521    26788999999999999999999986  67999999989999999999999999875

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-53  Score=398.67  Aligned_cols=359  Identities=23%  Similarity=0.394  Sum_probs=306.7

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEeCChH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCT  110 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i~~g~~  110 (415)
                      .+.++|||+.|+|+    +++++.+++++++++..+. .++|++..|.++||++||+++++.+|..+++ ++|++|+|++
T Consensus        23 ~~~dvI~l~~G~p~----~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~it~G~~   98 (418)
T d1w7la_          23 SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGY   98 (418)
T ss_dssp             HTSCCEECCCCSCS----SCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHH
T ss_pred             CCCCCEECCCCCCC----CCCCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhCCCCCcccceeeccCcH
Confidence            36789999999975    7778999999999988653 4579999999999999999999988888875 6899999999


Q ss_pred             HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC----------CCCCCChhHHHhhcCCCceEEEec
Q 014936          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD----------KGWEVDLDDIESLADQNTVALVII  180 (415)
Q Consensus       111 ~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~~v~i~  180 (415)
                      +++.+++.+++++||.|+++.|+|+.|...+...|.+++.++..+.          .++.+|.+++.....+.+++++++
T Consensus        99 ~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~~~  178 (418)
T d1w7la_          99 GALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLN  178 (418)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHCCTTEEEEEEE
T ss_pred             HHHHHHHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccccccCcccchhhhhccccccccceecc
Confidence            9999999999999999999999999999999999999888876542          345678888888888889999999


Q ss_pred             CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEe
Q 014936          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      +||||||.+++.+++++|+++|+++++++|+||+|.++.|++....++..+.. .++++++.|+||.|+++|+|+||+++
T Consensus       179 ~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~  258 (418)
T d1w7la_         179 TPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG  258 (418)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEEEC
T ss_pred             CcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCccccccc
Confidence            99999999999999999999999999999999999999998877777666643 36799999999999999999999999


Q ss_pred             eCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCC------cHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          260 TDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQP------DEVFFKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      ++        +++..+.... ....+++...|.++..++...      ..+++.+.++.++++++.+.+.|+++ |+. +
T Consensus       259 ~~--------~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~  328 (418)
T d1w7la_         259 PD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLK-P  328 (418)
T ss_dssp             CH--------HHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCE-E
T ss_pred             ch--------hhhhhhccccccccccccchhhHHHHHHhhhccccccccccccccchhhhhhhhhhhhhhhhhc-CCc-c
Confidence            75        6777777664 335677788888777776431      13678888999999999999999998 788 5


Q ss_pred             CCCCCceEEEEecCcccc--------CCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------CCeEEEEeeCChhhHHHH
Q 014936          333 HKPEGSMAVMLKLNLSLL--------DDIIDDIDFCFKLAKEESVIILPGTAVGL-------KNWLRVTFAVDPYSLEEC  397 (415)
Q Consensus       333 ~~p~~g~~~~~~l~~~~~--------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------~~~iRi~~~~~~~~l~~~  397 (415)
                      ..|++|+|+|++++....        .+..++.+++.++|+++||.+.||+.|+.       ++|||||++.++++++++
T Consensus       329 ~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~~~~~~l~~a  408 (418)
T d1w7la_         329 LIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAM  408 (418)
T ss_dssp             EECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHH
T ss_pred             cCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEEEEEcCCHHHHHHH
Confidence            589999999998854111        11124678999999999999999999864       579999998899999999


Q ss_pred             HHHHHHHH
Q 014936          398 LDRIKSFY  405 (415)
Q Consensus       398 l~~l~~~~  405 (415)
                      +++|+++.
T Consensus       409 ~~rl~~~~  416 (418)
T d1w7la_         409 DEKLRKWK  416 (418)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99998764

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-51  Score=385.26  Aligned_cols=350  Identities=23%  Similarity=0.382  Sum_probs=304.6

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~a  112 (415)
                      ++++|||+.|+|+    +++++.+++++.+.+.++ .++|++..|.++||++||+|+++.+|..+.++ +|++|+|++++
T Consensus        25 ~~~~i~l~~G~Pd----~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~a   99 (382)
T d1u08a_          25 QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEA   99 (382)
T ss_dssp             HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHH
T ss_pred             cCCCEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHH
Confidence            4678999999985    778899999999988764 45899999999999999999999889888876 59999999999


Q ss_pred             HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       113 l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      +..++.+++++||.|++++|+|+.+...+...|.....++.+ ++++.+|++++++.+.++++++++++||||||.+++.
T Consensus       100 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~~~  178 (382)
T d1u08a_         100 LYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQ-PPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQ  178 (382)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECC-TTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHhhcccccceEEEecccccchhhhhhhccccceecccc-cccccCCHHHHhhhhccCccEEEECCCCccccccccc
Confidence            999999999999999999999999999999999988877764 4567789999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc-CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      +++++|+++|.+++++++.|++|..+.+.+......... ...+++|++.|+||.++++|+|+||+++++        ++
T Consensus       179 ~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~--------~~  250 (382)
T d1u08a_         179 ADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PI  250 (382)
T ss_dssp             HHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HH
T ss_pred             ccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccc--------hh
Confidence            999999999999999999999999988776544433322 334579999999999999999999999865        67


Q ss_pred             HHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc
Q 014936          272 VERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL  350 (415)
Q Consensus       272 ~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~  350 (415)
                      ++.+.... ....+.+.+.|.++..+++.. ++++++.++.++++++.+.+.++.. ++. +..|++|+|+|++++... 
T Consensus       251 ~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-g~~-~~~p~gg~~~~~~~~~~~-  326 (382)
T d1u08a_         251 SAEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS-  326 (382)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC-
T ss_pred             HHHHHhhhcccccccccccccccccccccc-hHHHHHHHHHHHhhhhhhhhhhccC-CcE-EecCCceEEEEEecCCCC-
Confidence            77776653 345778889999999999754 5789999999999999999998776 788 558999999999987532 


Q ss_pred             CCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhhHHHHHHHHHH
Q 014936          351 DDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       351 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                        ..++.+++.++++++||.+.||+.|+.    .+++|||++.++|++++++++|++
T Consensus       327 --~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~~~~e~l~~al~RL~~  381 (382)
T d1u08a_         327 --TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ  381 (382)
T ss_dssp             --CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred             --CCCHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHhC
Confidence              237889999999999999999999964    468999998899999999999875

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=1.1e-51  Score=390.19  Aligned_cols=381  Identities=23%  Similarity=0.317  Sum_probs=309.7

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP   80 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~   80 (415)
                      +|+++..+.+|  .|++++.     +   .+++++|||+.|.|+..  ..+.+.+++++.+.+...  ....|+++.|.+
T Consensus         7 ~~~~~~~~~~s--~ire~~~-----~---~~~~~~i~l~~G~P~~~--~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~   74 (403)
T d1wsta1           7 FSEKAMLMKAS--EVRELLK-----L---VETSDVISLAGGLPAPE--TFPVETIKKIAVEVLEEHADKALQYGTTKGFT   74 (403)
T ss_dssp             CCHHHHHCCCH--HHHHHHH-----H---HTSSSCEECCCCCCCGG--GSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCH
T ss_pred             HHHHHhcCCCc--HHHHHHH-----H---hCCCCcEECCCCCCCcc--ccCHHHHHHHHHHHHHhCcccccCCCCCcCCH
Confidence            57777888887  6766655     2   23567999999998743  345678888888877543  245799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (415)
                      +||++||+|+++.+|..+++++|++|+|+++++..++.++.++||.|++++|+|..+...+...|.++..++.+....+.
T Consensus        75 ~lR~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~  154 (403)
T d1wsta1          75 PLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRV  154 (403)
T ss_dssp             HHHHHHHHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECH
T ss_pred             HHHHHHHHHHHHHhCCCCChHHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeecccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999876543322


Q ss_pred             CChhHH----HhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCC
Q 014936          161 VDLDDI----ESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (415)
Q Consensus       161 ~~~~~l----~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  236 (415)
                      ......    ....+.....+++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++...+..++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~  234 (403)
T d1wsta1         155 DLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGR  234 (403)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSC
T ss_pred             ccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCc
Confidence            222211    1222334567788999999999999999999999999999999999999999999888777777777789


Q ss_pred             eEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHH
Q 014936          237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQ  314 (415)
Q Consensus       237 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~  314 (415)
                      +++++|+||.+ ++|+|+||+++++        ++++.+.... ......+...|.+...++.... +.++++.++.+++
T Consensus       235 ~i~~~S~SK~~-~~G~RiG~~i~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (403)
T d1wsta1         235 VIYLGTFSKIL-APGFRIGWVAAHP--------HLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKP  305 (403)
T ss_dssp             EEEEEESTTTT-CGGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred             EEEEcccccee-cCcccccccccch--------HHHHHHHHHHhhhccccccchhhhHHhhhhccccchhHHHHHHHHHH
Confidence            99999999997 5999999999965        6777776653 3346677778777777766543 4677888899999


Q ss_pred             HHHHHHHHhhcC--CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEee
Q 014936          315 SVDICYNKIKEI--PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFA  388 (415)
Q Consensus       315 ~~~~l~~~l~~~--~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~  388 (415)
                      +++.+.+.|.+.  .++. +..|.+|+|+|++++..     .+...+++. |.++||.+.||+.|+.    ++++||+++
T Consensus       306 ~~~~~~~~L~~~~~~~~~-~~~p~gg~~~~~~~~~~-----~~~~~~~~~-l~~~gV~v~pg~~f~~~~~~~~~iRi~~~  378 (403)
T d1wsta1         306 RRDAMLEALEEYMPEGVE-WTKPEGGMFVRVTLPEG-----IDTKLMMER-AVAKGVAYVPGEAFFVHRDKKNTMRLNFT  378 (403)
T ss_dssp             HHHHHHHHHHHHCCTTCE-ECCCSBSSEEEEECCTT-----CCTTTTHHH-HHHTTEECEEGGGGSTTCCCCSEEEEECS
T ss_pred             HHHHHHHHHHhhccCCeE-EeCCCceeEEEEECCCC-----CCHHHHHHH-HHHCCEEEEechhhcCCCCCCCEEEEEec
Confidence            999999999863  3455 55899999999999863     134445454 5677999999998864    579999997


Q ss_pred             -CChhhHHHHHHHHHHHHHHHHHH
Q 014936          389 -VDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       389 -~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                       .+++++++++++|++++++..++
T Consensus       379 ~~~~~~l~~al~rl~~~l~~~~k~  402 (403)
T d1wsta1         379 YVPEETIREGVRRLAETIKEEMKR  402 (403)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhc
Confidence             68999999999999999987775

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=2e-51  Score=390.90  Aligned_cols=391  Identities=18%  Similarity=0.293  Sum_probs=302.8

Q ss_pred             cccCCccCCcc-hhhHHHHHHHhh-hcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhc-----------CC
Q 014936            3 ISNGGIDNTGS-IITIKGMLSLLM-QSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-----------EK   69 (415)
Q Consensus         3 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-----------~~   69 (415)
                      +|+|+.-..-. ..+-.+.+..+. ..+++..|+.++|+|+++.+.     ...+.+.+.+.+....           ..
T Consensus         2 ~~~~~~~~~~~~~s~y~~g~~~~~~~~~~~~~np~G~i~l~~~en~-----l~~d~~~~~l~~~~~~~~~~~~~~~~~~~   76 (431)
T d1m7ya_           2 LSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQ-----LCFDLLESWLAKNPEAAAFKKNGESIFAE   76 (431)
T ss_dssp             CCSTTC-------CHHHHHHHHHHHSBCCSSSCTTSBEECSSCCCC-----SCHHHHHHHHHHCCTGGGTEETTEECHHH
T ss_pred             cchhhcccCCccCCchhhhhhhhhcCCCCCcCCCCcEEEeeccccc-----ccHHHHHHHHHhCCchhhhhhhhhhccHH
Confidence            56777633322 223333333332 235666677789999999853     2345555555542110           01


Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhhhCC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-CCC
Q 014936           70 FNGYAPTAGLPLTRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHI  146 (415)
Q Consensus        70 ~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~-~g~  146 (415)
                      ...|+++.|.++||++||+|+++++|  +.+++++|++|+|+++++..++.+++++||+|+++.|+|+.+...+.. .|+
T Consensus        77 ~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~pe~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~  156 (431)
T d1m7ya_          77 LALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGV  156 (431)
T ss_dssp             HHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCC
T ss_pred             hcCCcCCcCcHHHHHHHHHHHHHHhCCCCCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCc
Confidence            23699999999999999999999877  456789999999999999999999999999999999999998888764 589


Q ss_pred             eEEEeeccCCCCCCCChhHHHhhcC------CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCccc
Q 014936          147 EVRHFDLLPDKGWEVDLDDIESLAD------QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF  220 (415)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~  220 (415)
                      +++.++.+.++++.+|++.+++.+.      .++++++++|||||||.+++.+++++|+++|+++|+++|+||+|+.+.|
T Consensus       157 ~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~  236 (431)
T d1m7ya_         157 EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAF  236 (431)
T ss_dssp             EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCC
T ss_pred             eeccccccchhcccccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeeccccccccc
Confidence            9999998888888999999887664      3678899999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccccCC----------CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHH
Q 014936          221 GDKPFVPMGVFGS----------TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ  290 (415)
Q Consensus       221 ~~~~~~~~~~~~~----------~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (415)
                      ++..+.++..+..          .+++++++|+||.|+++|+|+||+++++        +++.............++..+
T Consensus       237 ~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~--------~~i~~~~~~~~~~~~~~~~~~  308 (431)
T d1m7ya_         237 SSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSND--------DMVVAAATKMSSFGLVSSQTQ  308 (431)
T ss_dssp             SSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESC--------HHHHHHHHHHGGGSCCCHHHH
T ss_pred             CCCCCCCHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccch--------hhhHHHHHHHhcccccccccc
Confidence            8766555433221          2479999999999999999999999976        444444333333445556666


Q ss_pred             HHHHHhhCCCc--HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC-CCCCHHHHHHHHHhhc
Q 014936          291 AAVPSILQQPD--EVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD-DIIDDIDFCFKLAKEE  367 (415)
Q Consensus       291 ~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~-~~~~~~~~~~~ll~~~  367 (415)
                      .++.+.+....  ++++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++..... ...++.+++.++++++
T Consensus       309 ~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-gi~-~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~  386 (431)
T d1m7ya_         309 HLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEV  386 (431)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTS
T ss_pred             chhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcC-CcE-EecCCceeEEEEECccccccCcccCHHHHHHHHHHHC
Confidence            66666665432  4678889999999999999999886 888 55899999999998753221 1224567889999999


Q ss_pred             CeEEEcCCCCCC--CCeEEEEee-CChhhHHHHHHHHHHHHHHH
Q 014936          368 SVIILPGTAVGL--KNWLRVTFA-VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       368 gi~v~~g~~~~~--~~~iRi~~~-~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ||.+.||+.|+.  ++|+||+++ .+++++++++++|+++++++
T Consensus       387 gV~v~PG~~F~~~~~~~~Ri~~a~~~e~~l~~al~rL~~~l~~~  430 (431)
T d1m7ya_         387 HLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEY  430 (431)
T ss_dssp             CEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEeccccCCCCCCEEEEEeCcCCHHHHHHHHHHHHHHHHHh
Confidence            999999999876  689999997 46789999999999999875

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.8e-51  Score=378.62  Aligned_cols=354  Identities=19%  Similarity=0.286  Sum_probs=292.9

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHH
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA  116 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~  116 (415)
                      +|+|++|+|+    |++++.+++++++.+..+. .+|++..| +++|++|++++++++|..+++++|++|+|+++++..+
T Consensus         1 ~~~~~~~~~d----f~~p~~i~eal~~~~~~~~-~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~   74 (361)
T d1d2fa_           1 LLPFTISDMD----FATAPCIIEALNQRLMHGV-FGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSEL   74 (361)
T ss_dssp             CEECCSSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHH
T ss_pred             CcCcCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHH
Confidence            4899999975    8899999999999987754 48998777 7899999999999999999999999999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCC-CCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHH
Q 014936          117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQH  194 (415)
Q Consensus       117 ~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~  194 (415)
                      +.+++++||+|++++|+|..+...++..|.+++.++.+.. +++.+|++.+++.+. ++++++++++||||||.+++.++
T Consensus        75 ~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~  154 (361)
T d1d2fa_          75 IRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDE  154 (361)
T ss_dssp             HHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTH
T ss_pred             hhhccccccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhh
Confidence            9999999999999999999999999999999988887543 456689999998875 47889999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHH
Q 014936          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (415)
Q Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~  274 (415)
                      +++|+++|+++|+++|+||+|.++.+++....++.... .++++++.|+||.|+++|+|+||+++++..      .....
T Consensus       155 ~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~------~~~~~  227 (361)
T d1d2fa_         155 LEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA-RGDWALLTSGSKSFNIPALTGAYGIIENSS------SRDAY  227 (361)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTC-CSSEEEEECSHHHHTCGGGCCEEEEECSHH------HHHHH
T ss_pred             hhhhhhhhhhhheeeeeccccccccccccccccccccc-ccccccccccccccccccccceeeecchhH------HHHHH
Confidence            99999999999999999999999998877666665554 357889999999999999999999886521      12222


Q ss_pred             HHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcCCCCCCCceEEEEecCccccC
Q 014936          275 MKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE-IPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       275 ~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      +......  ...++...+.+....+.. ...+.++.+..++++++.+.+.+.. .+++. +..|++|+|+|++++...  
T Consensus       228 ~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~p~gg~~~~~~l~~~~--  303 (361)
T d1d2fa_         228 LSALKGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRPLN--  303 (361)
T ss_dssp             HHHHHTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGGGC--
T ss_pred             hhhcccccccccchhhhHHHHHHHhhc-cchhhhcccccchhhHHHHHHHhhhhccccc-ccccCceeEEEEEccCCC--
Confidence            2222221  223444444444444432 3567888888899998888887764 56777 558999999999886421  


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                        .++.+++.++++++||.+.||+.|+.  ++++|+|++.+++++++++++|++++++++
T Consensus       304 --~~~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis~~~~~e~l~~al~rl~~~l~~lr  361 (361)
T d1d2fa_         304 --IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR  361 (361)
T ss_dssp             --CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred             --CCHHHHHHHHHHhCCEEEEeccccCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHHhcC
Confidence              36889999999999999999999975  578999999899999999999999998763

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=2.9e-50  Score=382.44  Aligned_cols=366  Identities=20%  Similarity=0.346  Sum_probs=293.9

Q ss_pred             cccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC----------CCCCCCCCCCcHHHHHHHHHHHhhhCCC
Q 014936           27 SVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----------KFNGYAPTAGLPLTRRAIAEYLSRDLPY   96 (415)
Q Consensus        27 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----------~~~~y~~~~g~~~lr~~ia~~~~~~~~~   96 (415)
                      .+++..|++++|+|+++.+.     .....+.+.+.+.....          ....|+++.|.++||++||+|+++.+|.
T Consensus        28 ~~~~~~np~G~i~l~~aen~-----l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~  102 (428)
T d1iaya_          28 PFHPLKNPNGVIQMGLAENQ-----LCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGG  102 (428)
T ss_dssp             BCCSSSSTTSBEECSSCCCC-----SSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCcCCCCceEEeecccCc-----cchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCC
Confidence            45665678889999999743     33455555555432211          1247999999999999999999998875


Q ss_pred             --CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHh-CCCeEEEeeccCCCCCCCChhHHHhhc---
Q 014936           97 --KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGWEVDLDDIESLA---  170 (415)
Q Consensus        97 --~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~---  170 (415)
                        .+++++|++|+|+++++..++.+++++||.|++++|+|..+...+.. .|++++.++.+..++|.+|++.++.++   
T Consensus       103 ~~~~~~e~Ivit~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~  182 (428)
T d1iaya_         103 RVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENA  182 (428)
T ss_dssp             CSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHH
T ss_pred             CCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhh
Confidence              46789999999999999999999999999999999999999887764 589999999888888999998876543   


Q ss_pred             ---CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc--------CCCCCeEE
Q 014936          171 ---DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--------GSTVPILT  239 (415)
Q Consensus       171 ---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--------~~~~~~i~  239 (415)
                         ..+++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+.|++..+.++..+        ...+++++
T Consensus       183 ~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~  262 (428)
T d1iaya_         183 QKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI  262 (428)
T ss_dssp             HHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEE
T ss_pred             hccCCCceEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEE
Confidence               4567889999999999999999999999999999999999999999999987766554432        23467999


Q ss_pred             EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCc--HHHHHHHHHHHHHHHH
Q 014936          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPD--EVFFKKTLNLLKQSVD  317 (415)
Q Consensus       240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~  317 (415)
                      ++||||.|+++|+|+||+++.+       +.+.+.++.... ....+...+.++.+.+....  ++++++.++.++++++
T Consensus       263 ~~s~SK~~~~~GlRiG~~~~~~-------~~l~~~~~~~~~-~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~  334 (428)
T d1iaya_         263 VYSLSKDMGLPGFRVGIIYSFN-------DDVVNCARKMSS-FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHK  334 (428)
T ss_dssp             EEESTTTSSCGGGCEEEEEESC-------HHHHHHHHHHHT-TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCcccCCCcccccccccc-------cchhhhhhhhhc-ccccccccccchhhhhhhhccccccccccccccchhHH
Confidence            9999999999999999999865       246665555443 34556666666666665422  4677888889999999


Q ss_pred             HHHHHhhcCCCCcCCCCCCCceEEEEecCccccC-CCCCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEee-CChhh
Q 014936          318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD-DIIDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFA-VDPYS  393 (415)
Q Consensus       318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-~~~~~  393 (415)
                      .+.+.|+.. |+. +..|++|+|+|++++..... ...++.+++..+++++||.+.||..|+.  ++|+||+++ .++++
T Consensus       335 ~~~~~L~~~-gi~-~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a~~~~~~  412 (428)
T d1iaya_         335 HFTNGLEVV-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGT  412 (428)
T ss_dssp             HHHHHHHHT-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHH
T ss_pred             HHHHHHHhC-CCE-EecCCcceEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeCCCCHHH
Confidence            999999876 888 55899999999998653221 1223557888999999999999999976  789999997 46778


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFYQR  407 (415)
Q Consensus       394 l~~~l~~l~~~~~~  407 (415)
                      ++++++||++++..
T Consensus       413 l~~al~Rl~~~l~~  426 (428)
T d1iaya_         413 VDIALARIRRFVGV  426 (428)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998863

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-50  Score=378.62  Aligned_cols=361  Identities=29%  Similarity=0.406  Sum_probs=298.8

Q ss_pred             CccccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcH
Q 014936            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (415)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~   80 (415)
                      |++|+|.+..+++.  ...+.. +.       ...++|||+.|+|+    +++++.+++++++.+..  .+.|+++.|.+
T Consensus         1 ~~~~~~~~~~~~~~--~~~~~~-la-------~~~~~I~ls~g~p~----~~~p~~i~~al~~~l~~--~~~Y~~~~G~~   64 (368)
T d1v2da_           1 MRLHPRTEAAKESI--FPRMSG-LA-------QRLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLP   64 (368)
T ss_dssp             CCCCGGGGGC---C--HHHHHH-HH-------HHHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCH
T ss_pred             CCCChhhhhcCCCH--HHHHHH-Hh-------ccCCCEEecCCCCC----CCCCHHHHHHHHHHhhc--ccCCCCCcCCH
Confidence            89999999999983  333321 11       13457999999975    77899999999998864  35899999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC-CCCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGW  159 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~  159 (415)
                      +||++||+++      ++++++|++|+|+++++..++.+++++||.|+++.|+|..+...++..|.+++.++++. .+.+
T Consensus        65 elr~aiA~~~------~~~~~~Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  138 (368)
T d1v2da_          65 ALREALAEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGF  138 (368)
T ss_dssp             HHHHHHHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEE
T ss_pred             HHHHHHHhhc------ccCCcceeeccchHHHHHHHhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccc
Confidence            9999999999      57899999999999999999999999999999999999999999999999998887643 3457


Q ss_pred             CCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEE
Q 014936          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (415)
Q Consensus       160 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~  239 (415)
                      .+|++.+++.+++.++.+++++||||||.+++.+++++|+++|++||+++|+||+|..+.........  .....+++++
T Consensus       139 ~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~--~~~~~~~~~~  216 (368)
T d1v2da_         139 RLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRL--REFAPERTFT  216 (368)
T ss_dssp             ECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCH--HHHCTTTEEE
T ss_pred             cCCHHHHHHhhccCceEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhccccccccc--ccccccccce
Confidence            89999999999999999999999999999999999999999999999999999999987765443322  2233456788


Q ss_pred             EccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHH
Q 014936          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVD  317 (415)
Q Consensus       240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~  317 (415)
                      +.|+||.++++|+|+||+++++        ++.+.+.... ....+++...|.++..++.... ..++++.++.++++++
T Consensus       217 ~~~~sk~~~~~G~R~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~  288 (368)
T d1v2da_         217 VGSAGKRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRD  288 (368)
T ss_dssp             EEEHHHHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             eecccccccccccccccccccc--------cccchhhhhhhccccccccccccccccccccccchhhHHHHHHHHHHhhh
Confidence            8999999999999999999876        4566665553 3456778888888887776432 3578888999999999


Q ss_pred             HHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----CCeEEEEeeCChhh
Q 014936          318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----KNWLRVTFAVDPYS  393 (415)
Q Consensus       318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~  393 (415)
                      .+.+.|+++ ++. +..|++|+|+|++++.      .+.    .++++++||.+.||+.|+.    ++++|||++.++++
T Consensus       289 ~l~~~l~~~-g~~-~~~p~g~~~~~~~l~~------~~~----~~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~~~~e~  356 (368)
T d1v2da_         289 LLAGGLRAM-GLR-VYVPEGTYFLMAELPG------WDA----FRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEE  356 (368)
T ss_dssp             HHHHHHHHT-TCC-EECCSBSSEEEEECTT------CCH----HHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHH
T ss_pred             hhhhhHHhc-CcE-EecCCceeEEEEeCCc------cHH----HHHHHhCCEEEEechhhCCCCCCCCEEEEEecCCHHH
Confidence            999999998 888 5589999999999863      133    2456788999999998864    57999999888999


Q ss_pred             HHHHHHHHHHHH
Q 014936          394 LEECLDRIKSFY  405 (415)
Q Consensus       394 l~~~l~~l~~~~  405 (415)
                      +++++++|++++
T Consensus       357 i~~ai~rL~~~l  368 (368)
T d1v2da_         357 LHLALERLGRVV  368 (368)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            999999999863

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.3e-51  Score=388.71  Aligned_cols=379  Identities=22%  Similarity=0.299  Sum_probs=308.4

Q ss_pred             cccCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCcH
Q 014936            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP   80 (415)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~y~~~~g~~   80 (415)
                      +|+++..+.+|  .+++++.     +   ..++++|||+.|.|+..  ..|.+.+.+++++.++..  ....|+++.|.+
T Consensus        16 ~s~~~~~~~~s--~ir~~~~-----~---~~~~~~I~l~~G~Pd~~--~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~   83 (420)
T d1vp4a_          16 ISKIGQNMKSS--IIREILK-----F---AADKDAISFGGGVPDPE--TFPRKELAEIAKEIIEKEYHYTLQYSTTEGDP   83 (420)
T ss_dssp             CCHHHHTCCCC--CHHHHTT-----T---TTSTTCEECCCCSCCGG--GSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCH
T ss_pred             HhHHHHhCCCc--HHHHHHH-----H---hCCCCcEecCCcCCCCc--cCCHHHHHHHHHHHHhhCCccccCCCCCcCCH
Confidence            78888888888  7776543     2   34778999999998743  345677888888877643  235899999999


Q ss_pred             HHHHHHHHHHhhhCCCC-CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCC
Q 014936           81 LTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~-~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  159 (415)
                      +||++||+|+++.+|.. +++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.++..++.+++   
T Consensus        84 ~LR~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~---  160 (420)
T d1vp4a_          84 VLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---  160 (420)
T ss_dssp             HHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---
T ss_pred             HHHHHHHHHHHHHhCCCCCCHHHeEeccchhhhHHHHHHhhhccccccccccccccchhHHHHHHhhhccccccccc---
Confidence            99999999999988875 78999999999999999999999999999999999999999999999999999987543   


Q ss_pred             CCChhHHHhhc---------CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc
Q 014936          160 EVDLDDIESLA---------DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (415)
Q Consensus       160 ~~~~~~l~~~~---------~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  230 (415)
                      +++++.++..+         ...+.++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++....+...
T Consensus       161 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~  240 (420)
T d1vp4a_         161 GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK  240 (420)
T ss_dssp             EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH
T ss_pred             ccccchhhhhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccc
Confidence            46777664432         123345668899999999999999999999999999999999999999998877666666


Q ss_pred             cCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHH
Q 014936          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKT  308 (415)
Q Consensus       231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~  308 (415)
                      ....+++++++|+||. +++|+|+||+++++        ++++.+.... .....++...|.++..++.... .+++++.
T Consensus       241 ~~~~~~~i~~~s~sk~-~~~G~RiG~~~~~~--------~~i~~l~~~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~  311 (420)
T d1vp4a_         241 IGGPERVVLLNTFSKV-LAPGLRIGMVAGSK--------EFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPT  311 (420)
T ss_dssp             HHCTTTEEEEEESTTT-TCGGGCEEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHH
T ss_pred             cccccceeEEeccccc-cccccccccccccc--------hhhhhhhhhhhhccccCchhhhhhhhhhcccccccccchhH
Confidence            6667789999999998 57999999999865        6888887663 3346677888888877776543 4667777


Q ss_pred             HHHHHHHHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC----C
Q 014936          309 LNLLKQSVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL----K  380 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~  380 (415)
                      ++.++++++.+.+.|++    +|++. +..|.+|+|+|++++..     .++.+++. +|+++||.+.||+.|+.    .
T Consensus       312 ~~~~~~~~~~~~~~L~~~~~~~~g~~-~~~p~gg~f~~~~~~~~-----~d~~~~~~-~l~~~gV~v~PG~~F~~~~~~~  384 (420)
T d1vp4a_         312 IELYRRKRTVMLNALEEYFSDIPGVK-WVKSEGGLFIWLTLPEG-----FDTWEMFE-YAKRKKVFYVPGRVFKVYDEPS  384 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSTTCE-ECCCSBSSEEEEECCTT-----CCTTTTHH-HHHHHTEECEEGGGGCTTCCCC
T ss_pred             HHHhhhhcccchhhhhhhhccCCCcE-EecCCceEEEEEECCCC-----CCHHHHHH-HHHHCCeEEEechhhCCCCCCC
Confidence            77888887777777764    56787 55899999999999752     14445554 45678999999999875    4


Q ss_pred             CeEEEEee-CChhhHHHHHHHHHHHHHHHHHHh
Q 014936          381 NWLRVTFA-VDPYSLEECLDRIKSFYQRHAKQL  412 (415)
Q Consensus       381 ~~iRi~~~-~~~~~l~~~l~~l~~~~~~~~~~~  412 (415)
                      +++|||++ .+++++++++++|+++++++.++.
T Consensus       385 ~~iRls~~~~~~e~l~~a~~rL~~~l~~~~~~~  417 (420)
T d1vp4a_         385 PSMRLSFCLPPDEKIVEGIKRLREVVLEYGKEK  417 (420)
T ss_dssp             SEEEEECSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEeCcCCHHHHHHHHHHHHHHHHHhhHhh
Confidence            69999996 578999999999999999988764

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=3.8e-45  Score=339.20  Aligned_cols=332  Identities=20%  Similarity=0.321  Sum_probs=272.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ++++|||+.|.+.    +++++.+++++.+.+..  +..|+++ +..+||+++|+++      ++++++|++++|+++++
T Consensus        21 p~~~idls~~~np----~~~p~~~~~a~~~~~~~--~~~Yp~~-~~~~Lr~aia~~~------~v~~~~I~~~~g~~~~~   87 (355)
T d1lc5a_          21 PDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPDA-DYFHLHQALARHH------QVPASWILAGNGETESI   87 (355)
T ss_dssp             GGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCCT-TCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred             hhheEEccCCCCC----CCCCHHHHHHHHHHHHH--hccCCCC-ChHHHHHHHHHHh------CCCHHHEEecccHHHHH
Confidence            4568999999643    66789999999887653  4579764 6799999999999      57899999999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHH
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~  193 (415)
                      ..++.++.  |+.+++..|.|..+.......+.++..+++..++++.++ +.+++...++++++++++||||||.+++.+
T Consensus        88 ~~~~~~~~--~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~l~nP~NPtG~~~~~e  164 (355)
T d1lc5a_          88 FTVASGLK--PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERP  164 (355)
T ss_dssp             HHHHHHHC--CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHHhhhc--cccccccCCccceeccccccccccceeeeeeccCCccce-eeeeeccccccceeeeecccCcccccchhh
Confidence            98887764  456667789999888888899999999998777777666 556667788899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHH
Q 014936          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (415)
Q Consensus       194 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~  273 (415)
                      ++++|+++|+++++++|+||+|..+.+.+.....  .....++++++.|+||.|+++|+|+||+++++.       .+.+
T Consensus       165 ~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~-------~~~~  235 (355)
T d1lc5a_         165 LLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD-------AAMA  235 (355)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGG--GCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH-------HHHH
T ss_pred             hhhhhhhhccccccccccccceeeeeeecccccc--cccccccceeecccccccccccccccceeccch-------hhhH
Confidence            9999999999999999999999998766544333  234456899999999999999999999998761       2444


Q ss_pred             HHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCC
Q 014936          274 RMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDI  353 (415)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~  353 (415)
                      .++... ..+..+.+++.++..+|++  ..++.+.+++++++++++.+.|.+++++. + .|.+|+|+|++++.      
T Consensus       236 ~~~~~~-~~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~p~~~~f~~~~~~~------  304 (355)
T d1lc5a_         236 RMRRQQ-MPWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-V-YPGRANYLLLRCER------  304 (355)
T ss_dssp             HHHHHS-CTTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCCSSSEEEEEESC------
T ss_pred             HHHhhc-CCccccccccccccccccc--cchhHHHHHHHHHHHHHHHHHHhhcCCcE-E-CCCCCEEEEEECCC------
Confidence            444433 3467788899999999975  57788889999999999999999998877 5 68889999998874      


Q ss_pred             CCHHHHHHHHHhhcCeEEEcCCCCCC--CCeEEEEeeCChhhHHHHHHHHHHH
Q 014936          354 IDDIDFCFKLAKEESVIILPGTAVGL--KNWLRVTFAVDPYSLEECLDRIKSF  404 (415)
Q Consensus       354 ~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~l~~~l~~l~~~  404 (415)
                       ++.+++..+ .++||.++||..|+.  ++|+||+++ ++++++.++++|+++
T Consensus       305 -~~~~~~~~L-~~~gv~vr~~~~f~~~~~~~iRis~~-~~~e~~~li~aL~~i  354 (355)
T d1lc5a_         305 -EDIDLQRRL-LTQRILIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNV  354 (355)
T ss_dssp             -TTCCHHHHH-HTTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHH-HHCCcEEEeCccCCCCCCCEEEEEeC-CHHHHHHHHHHHHHh
Confidence             445666666 466999999988764  689999996 678888888888875

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=9.6e-46  Score=348.53  Aligned_cols=366  Identities=16%  Similarity=0.126  Sum_probs=285.8

Q ss_pred             cCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHH
Q 014936            9 DNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA   87 (415)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia   87 (415)
                      ..+++  +|..++.++.++.     .+++|||+.|.+ +.....++.+.|+++..+.+..+....|+++.|.++||++++
T Consensus         9 ~~p~d--~i~~~~~~~~~d~-----~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia   81 (401)
T d7aata_           9 MGPPD--PILGVTEAFKRDT-----NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASA   81 (401)
T ss_dssp             CCCCC--HHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHH
T ss_pred             CCCCC--hHHHHHHHHhCCC-----CCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHH
Confidence            34444  6777776555443     345799999952 222335567999999988887766568999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEeCChH-----HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCC
Q 014936           88 EYLSRDLPYKLTPNDVFVTSGCT-----QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (415)
Q Consensus        88 ~~~~~~~~~~~~~~~i~i~~g~~-----~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~  162 (415)
                      +++.+..+..+.+++|+++.++.     +++..++++++++||+|++++|+|+.|...++..|++++.++..+++++..+
T Consensus        82 ~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~  161 (401)
T d7aata_          82 ELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLD  161 (401)
T ss_dssp             HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEEC
T ss_pred             HHHhccCCcccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEecccccccccc
Confidence            99988777667788887765543     5677788889999999999999999999999999999999998887888889


Q ss_pred             hhHHHhhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc---cccCCCCC
Q 014936          163 LDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM---GVFGSTVP  236 (415)
Q Consensus       163 ~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~---~~~~~~~~  236 (415)
                      ++.+.+.+.   ++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++......   ......++
T Consensus       162 ~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~  241 (401)
T d7aata_         162 FTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGID  241 (401)
T ss_dssp             HHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred             HHHHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhcc
Confidence            988877663   568899999999999999999999999999999999999999999999876433222   11233456


Q ss_pred             eEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh----h-ccccCCchhHHHHHHHHhhCCCc-----HHHHH
Q 014936          237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQAAVPSILQQPD-----EVFFK  306 (415)
Q Consensus       237 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~  306 (415)
                      ++++.|+||.++++|+|+||++++...  .   +....+..    . .....+++...|.++..++.+..     ..+++
T Consensus       242 ~~~~~s~sk~~~~~G~RiG~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~  316 (401)
T d7aata_         242 VVLSQSYAKNMGLYGERAGAFTVICRD--A---EEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVK  316 (401)
T ss_dssp             CEEEEECTTTSCCGGGCEEEEEEECSS--H---HHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             cceeEeccccceeeccccceeecchHH--H---HHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            788899999999999999999997632  1   11111111    1 12235677788888888887632     25567


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCC---CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeE
Q 014936          307 KTLNLLKQSVDICYNKIKEIPC---ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWL  383 (415)
Q Consensus       307 ~~~~~~~~~~~~l~~~l~~~~~---~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~i  383 (415)
                      ..+++++++++.+.+.|+++..   +. +..|++|+|+|+.++          .+++.+|++++||.+.||.        
T Consensus       317 ~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~ls----------~e~~~~L~~e~gV~~~pg~--------  377 (401)
T d7aata_         317 GMADRIISMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKDG--------  377 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTTC--------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCcc-eECCCCeEEEecCCC----------HHHHHHHHHhCCEEECCCc--------
Confidence            7888899999999999998622   33 346899999997653          4568889999999999984        


Q ss_pred             EEEee-CChhhHHHHHHHHHHHH
Q 014936          384 RVTFA-VDPYSLEECLDRIKSFY  405 (415)
Q Consensus       384 Ri~~~-~~~~~l~~~l~~l~~~~  405 (415)
                      |||++ .++++++.+.++|.+++
T Consensus       378 Ris~a~~~~~~i~~la~ai~~v~  400 (401)
T d7aata_         378 RISVAGVASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred             EEEeccCCHHHHHHHHHHHHHHh
Confidence            99995 78999999888888775

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-42  Score=321.65  Aligned_cols=324  Identities=20%  Similarity=0.324  Sum_probs=257.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHH
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~a  112 (415)
                      ++++.+.|+.+.+.    +++++.+        ....+++||++ +..+||+++|+++      ++++++|++|+|++++
T Consensus        25 ~~~~~i~L~~ne~p----~~~~~~~--------~~~~l~rYPd~-~~~~Lr~~ia~~~------gv~pe~I~it~Gs~ea   85 (354)
T d1fg7a_          25 GGNGDVWLNANEYP----TAVEFQL--------TQQTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEG   85 (354)
T ss_dssp             TTTCSEECSSCCCS----SCCCCCC--------CCCCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred             CCCCCEEeeCCCCC----CCCCHHH--------HHHHHhcCCCC-cHHHHHHHHHHHh------CCChHHeeeccCchHH
Confidence            45678999988632    3333322        22245789875 5589999999999      6899999999999999


Q ss_pred             HHHHHHHhcCCCC-EEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          113 IDVAMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       113 l~~~~~~l~~~gd-~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      +..++++++++|| .|+++.|+|..+...++..|.++..++..  ++|.+|+++++..+. +++++++++||||||.+++
T Consensus        86 i~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~--~~~~~d~~~l~~~~~-~~~~v~~~~pnNPtG~~~~  162 (354)
T d1fg7a_          86 IELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLIN  162 (354)
T ss_dssp             HHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHhhccccccccccccccccchhhhhccCceeeccccc--cccccchhhhhhccc-ccceeeccCCCccceeEee
Confidence            9999999999998 58889999999999999999999888764  568899999998774 7899999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      .++++.+.+.++. +.++|+||+|.++..+....   ......+++++++||||.|+++|+|+||+++++        ++
T Consensus       163 ~~~~~~~~~~~~~-~~~~iidd~~~~f~~~~~~~---~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~~--------~~  230 (354)
T d1fg7a_         163 PQDFRTLLELTRG-KAIVVADEAYIEFCPQASLA---GWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EV  230 (354)
T ss_dssp             HHHHHHHHHHHTT-TCEEEEECTTGGGSGGGCSG---GGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HH
T ss_pred             ecccccccccccc-cccccccccchhhccccccc---hhhcccccceEEeCCccccCCCccccccccccc--------hh
Confidence            9999999888865 67788888888776443322   223445678999999999999999999999865        78


Q ss_pred             HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      ++.+..... .+..+.+.+.++..++......+.....+++.+.++.+.+.+.+++++. ...|.+++|+|++++     
T Consensus       231 i~~l~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~-~~~p~~~~f~~~~~~-----  303 (354)
T d1fg7a_         231 INLLMKVIA-PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVE-QVFDSETNYILARFK-----  303 (354)
T ss_dssp             HHHHHHHSC-SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECCCSSSEEEEEET-----
T ss_pred             hhhhhhhcC-ccchhhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcc-eeCCCCceEEEEeCC-----
Confidence            888877654 3456666777666666543345566777888899999999999987765 337899999999886     


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCC-CCCCeEEEEeeCChhhHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAV-GLKNWLRVTFAVDPYSLEECLDRIK  402 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~iRi~~~~~~~~l~~~l~~l~  402 (415)
                         ++.+++..| .++||.++++..| +.++|+|||++ ++++++.++++|+
T Consensus       304 ---~~~~~~~~L-~~~gIlvr~~~~~~~~~~~lRisig-t~ee~~~~l~aLk  350 (354)
T d1fg7a_         304 ---ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALR  350 (354)
T ss_dssp             ---THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC-CHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHH-HHCCcEEecCCCCCCCCCEEEEEeC-CHHHHHHHHHHHh
Confidence               456677666 5679999998775 45899999996 4567777777765

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=4.7e-43  Score=331.27  Aligned_cols=364  Identities=13%  Similarity=0.111  Sum_probs=272.4

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccC-CCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCcHHHHHHHHHHHhhh
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLSE-KFNGYAPTAGLPLTRRAIAEYLSRD   93 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~~-~~~~y~~~~g~~~lr~~ia~~~~~~   93 (415)
                      ++..+..++.++.     .+.+|||+.|. ++.....++.+.|+++.+...... ..+.|++..|.++||+++++++.+.
T Consensus        16 ~i~~l~~~~~~d~-----~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G~p~lreaia~~~~~~   90 (412)
T d1ajsa_          16 LVFKLIADFREDP-----DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGD   90 (412)
T ss_dssp             HHHHHHHHHHTCC-----CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHhcCC-----CCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCCCHHHHHHHHHHHhcc
Confidence            6777777666443     34569999993 111223556788988877765543 3357999999999999999999877


Q ss_pred             CCCCCCCCcEE--EeCChHHHHHHHHHH-------hcCCCCEEEEcCCCCcchHHHHHhCCCeEEEe-eccCCCCCCCCh
Q 014936           94 LPYKLTPNDVF--VTSGCTQAIDVAMAL-------LSRPGANILLPRPGFPIYELSAAFRHIEVRHF-DLLPDKGWEVDL  163 (415)
Q Consensus        94 ~~~~~~~~~i~--i~~g~~~al~~~~~~-------l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~  163 (415)
                      .+..+..+++.  .|++++.++..+..+       +.++||+|++++|+|+.|...++..|++.+.+ +...++.+..|.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~~~~d~  170 (412)
T d1ajsa_          91 DSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDL  170 (412)
T ss_dssp             TCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECH
T ss_pred             CCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeecccccccccccH
Confidence            76656666554  455666555554444       36999999999999999999999999886544 444445567788


Q ss_pred             hHHHhh---cCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc---ccccCCCCCe
Q 014936          164 DDIESL---ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP---MGVFGSTVPI  237 (415)
Q Consensus       164 ~~l~~~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~---~~~~~~~~~~  237 (415)
                      +.+++.   ..++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++.....   .......+++
T Consensus       171 ~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~  250 (412)
T d1ajsa_         171 QGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFEL  250 (412)
T ss_dssp             HHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCE
T ss_pred             HHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhhhcccc
Confidence            776654   3567888999999999999999999999999999999999999999999987643222   1222344568


Q ss_pred             EEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH----hh-ccccCCchhHHHHHHHHhhCCCc-----HHHHHH
Q 014936          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----KY-FDILGDPATFIQAAVPSILQQPD-----EVFFKK  307 (415)
Q Consensus       238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~  307 (415)
                      +++.|+||.++++|+|+||++++...     .+....+.    .. .....+++...|.++..++.+..     .++++.
T Consensus       251 ~~~~s~sk~~~~~G~R~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (412)
T d1ajsa_         251 FCAQSFSKNFGLYNERVGNLTVVAKE-----PDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKT  325 (412)
T ss_dssp             EEEEECTTTSCCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCccccccchhH-----HHHHHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            89999999999999999999997632     11112221    11 12345677888888888876522     355677


Q ss_pred             HHHHHHHHHHHHHHHhhcCCC---CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEE
Q 014936          308 TLNLLKQSVDICYNKIKEIPC---ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLR  384 (415)
Q Consensus       308 ~~~~~~~~~~~l~~~l~~~~~---~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iR  384 (415)
                      .+++++++++.+.+.|+.++.   +. +..+.+|+|.|+.++          .+++.+|++++||.+.||.        |
T Consensus       326 ~~~~l~~~r~~l~~~L~~~~~~~~~~-~i~~~~G~F~~~~ls----------~~~v~~L~~e~gV~~vpg~--------R  386 (412)
T d1ajsa_         326 MADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIYLLPSG--------R  386 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTTS--------E
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCee-eecCCCeEEEecCCC----------HHHHHHHHHhCCEEEeCCC--------e
Confidence            888899999999999998622   33 336789999996552          3567888899999999985        9


Q ss_pred             EEe-eCChhhHHHHHHHHHHHHHHH
Q 014936          385 VTF-AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       385 i~~-~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ||+ +.++++++.++++|.++++++
T Consensus       387 i~~ag~~~~~i~~~a~aI~~av~~~  411 (412)
T d1ajsa_         387 INMCGLTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             EEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred             EEeccCCHHHHHHHHHHHHHHHHhc
Confidence            999 478999999999999998763

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=8.5e-43  Score=329.02  Aligned_cols=376  Identities=12%  Similarity=0.114  Sum_probs=279.5

Q ss_pred             cCCccCCcchhhHHHHHHHhhhcccccccCcceeEecccC-CCCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCcHHH
Q 014936            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLS-EKFNGYAPTAGLPLT   82 (415)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~-~~~~~y~~~~g~~~l   82 (415)
                      .+-...+++  +|.++...+.++.     .+..|||++|. ++.....++.+.|+++.+..... ...+.|++..|.++|
T Consensus         6 ~~~~~~~~d--~i~~~~~~~~~d~-----~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~l   78 (412)
T d1yaaa_           6 NNIELLPPD--ALFGIKQRYGQDQ-----RATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSL   78 (412)
T ss_dssp             TTCCCCCCC--TTHHHHHHHHTCC-----CSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHH
T ss_pred             hcCCcCCCC--hHHHHHHHHhcCC-----CCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCCHHH
Confidence            344555666  5666666555544     23469999993 11122245568899887665543 234589999999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEe--CChHHHHHHHH--HHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCC
Q 014936           83 RRAIAEYLSRDLPYKLTPNDVFVT--SGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (415)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~i~--~g~~~al~~~~--~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  158 (415)
                      |+++++++.+..+..+.++.++.+  .|+..++..++  ..+.++||.|++++|+|+.|...++..|.++..++...+++
T Consensus        79 r~aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~  158 (412)
T d1yaaa_          79 TSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANET  158 (412)
T ss_dssp             HHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTT
T ss_pred             HHHHHHHHhcccCccccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceeccccccccc
Confidence            999999998766544444544433  34444443333  34568999999999999999999999999999999877777


Q ss_pred             CCCChhHHHhhcC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccc------c
Q 014936          159 WEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM------G  229 (415)
Q Consensus       159 ~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~------~  229 (415)
                      +..+.+.++..+.   +.++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++....+.      .
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~  238 (412)
T d1yaaa_         159 KSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVE  238 (412)
T ss_dssp             TEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHH
T ss_pred             ccccchhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhh
Confidence            7888888776653   456788999999999999999999999999999999999999999999876433221      2


Q ss_pred             ccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH----hh-ccccCCchhHHHHHHHHhhCCCc---
Q 014936          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----KY-FDILGDPATFIQAAVPSILQQPD---  301 (415)
Q Consensus       230 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~a~~~~l~~~~---  301 (415)
                      .....++++++.|+||.|+++|+|+||++++++.... ..+..+.+.    .. .....+++...|.++..++.+..   
T Consensus       239 ~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  317 (412)
T d1yaaa_         239 KLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQ-NKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTE  317 (412)
T ss_dssp             HTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTT-HHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHH
T ss_pred             ccccCCCeEEEEecCCccccCcCceEEEEEchhhhhh-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHH
Confidence            2345567899999999999999999999998633111 111222221    11 22356788899999998887632   


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHHhhcCCC---CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCC
Q 014936          302 --EVFFKKTLNLLKQSVDICYNKIKEIPC---ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTA  376 (415)
Q Consensus       302 --~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~  376 (415)
                        ..+++..++.++++++.+.+.|+++..   +. +..|++|+|+|+.++          .+++++|++++||.+.||. 
T Consensus       318 ~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~~~~gG~F~~~~ls----------~e~~~~L~~e~~V~~~~g~-  385 (412)
T d1yaaa_         318 QWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT----------PQMVKRLEETHAVYLVASG-  385 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTTS-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc-eeCCCceEEEecCcC----------HHHHHHHHHhCCEEECCCC-
Confidence              355777888999999999999987521   44 347899999997552          4578899999999998875 


Q ss_pred             CCCCCeEEEEe-eCChhhHHHHHHHHHHHHHH
Q 014936          377 VGLKNWLRVTF-AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       377 ~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~~~  407 (415)
                             |||+ +.++++++.+.++|+++++.
T Consensus       386 -------Ris~~g~~~~~i~~l~~ai~~v~k~  410 (412)
T d1yaaa_         386 -------RASIAGLNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             -------EEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred             -------EEEeccCCHHHHHHHHHHHHHHHHh
Confidence                   9999 47899999999998888764

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-41  Score=312.40  Aligned_cols=318  Identities=16%  Similarity=0.209  Sum_probs=253.2

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      ..+++++.|+.|.+.    +++++.+++++.+.+....+..|++ .|.++||++||+|+++.   ++++++|++|+|+++
T Consensus        16 ~~~~d~~~l~~~enp----~~~p~~i~~~~~~~~~~~~~~~yp~-~g~~~Lr~aia~~~~~~---~v~~d~I~it~G~~~   87 (334)
T d2f8ja1          16 TEKRDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADE   87 (334)
T ss_dssp             CCCCCSEECSSCCCS----SCCCHHHHHHHHHHCCTTGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEEEHHHH
T ss_pred             ccCCCceEEECCCCC----CCCCHHHHHHHHHHhhcchhcCCCC-CCcHHHHHHHHHHhccc---CCCcceEEecCcchh
Confidence            457899999999754    6778999999999988766656654 69999999999999653   378999999999999


Q ss_pred             HHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       112 al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      ++.+++..    ||+|++++|+|..+...++..|++++.++.+++..  .+     +...++++++++++|+||||.+++
T Consensus        88 ~l~~l~~~----~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~--~~-----~~~~~~~~~l~l~nP~NPtG~~~s  156 (334)
T d2f8ja1          88 IIYVMMLM----FDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLR--IP-----EVNVGEGDVVFIPNPNNPTGHVFE  156 (334)
T ss_dssp             HHHHHHHH----SSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSC--CC-----CCCCCTTEEEEEESSCTTTCCCCC
T ss_pred             HHHHHhhh----ccccccccccccccccchhccCCcccccccccccc--cc-----ccccccceEEEecccccccceeec
Confidence            99877654    68999999999999999999999999999865432  11     223457889999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                      .+++.++    .++++++|+||+|.++.+...    .......+++++++|+||.|+++|+|+||+++++        ++
T Consensus       157 ~~~l~~~----~~~~~~ii~Dd~~~~~~~~~~----~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~--------~~  220 (334)
T d2f8ja1         157 REEIERI----LKTGAFVALDEAYYEFHGESY----VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------KF  220 (334)
T ss_dssp             HHHHHHH----HTTTCEEEEECTTGGGTCCCC----GGGGGTCSSEEEEEESTTTSSCTTTCEEEEEECH--------HH
T ss_pred             HHHhhcc----ccceeEEeecccchhhccccc----ccccccCceEEEEecCccccchhhhhhhhcccch--------HH
Confidence            8776654    357899999999987554332    2223345689999999999999999999999965        68


Q ss_pred             HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccC
Q 014936          272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~  351 (415)
                      ++.++.... ....+..+|.++..++..  .+++++.++.++++++.+.+.|+++ |+. +..| .|.|+|+.++..   
T Consensus       221 i~~l~~~~~-~~~~s~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~g~f~~~~~~~~---  291 (334)
T d2f8ja1         221 IDAYNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-ITDS-RGNFVFVFMEKE---  291 (334)
T ss_dssp             HHHHHHHSC-TTCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCE-ECCC-CSSEEEEECCHH---
T ss_pred             HHHHHHhhc-ccccchhhhhhccccccc--ccchhhHHHHHHHHHHHHHHHHHHC-CCe-ECCC-CceEEEEECCCC---
Confidence            888877754 456788888888888875  5788899999999999999999998 787 4345 456889888652   


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLDRIKS  403 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~~l~~  403 (415)
                         +..++.+.+ .++||.+.++     ++++|||++ +++++++++++|++
T Consensus       292 ---~~~~~~~~L-~~~GI~vr~~-----~~~vRis~g-~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         292 ---EKERLLEHL-RTKNVAVRSF-----REGVRITIG-KREENDMILRELEV  333 (334)
T ss_dssp             ---HHHHHHHHH-HHTTEECEEE-----TTEEEEECC-CHHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHH-HHCCCEECCC-----CCeEEEEcC-CHHHHHHHHHHHhc
Confidence               355565555 5679998764     489999997 45667888887765

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-43  Score=332.53  Aligned_cols=364  Identities=15%  Similarity=0.113  Sum_probs=273.6

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCcHHHHHHHHHHHhhh
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLS-EKFNGYAPTAGLPLTRRAIAEYLSRD   93 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~-~~~~~y~~~~g~~~lr~~ia~~~~~~   93 (415)
                      +|..+...+.++.     ..+.|||+.|.+ +.....+..+.+++|....... .....|++..|.++||+++|+++.+.
T Consensus        12 pi~~~~~~~~~d~-----~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~   86 (397)
T d3tata_          12 PILTLMERFKEDP-----RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGA   86 (397)
T ss_dssp             TTTTHHHHHHHSC-----CSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHHHTCS
T ss_pred             cHHHHHHHHhcCC-----CCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHHHhhc
Confidence            4444555444443     234599999942 1112245678899987765443 23457999999999999999999887


Q ss_pred             CCCCCCCCcEEEeCChHHH----HHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh
Q 014936           94 LPYKLTPNDVFVTSGCTQA----IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL  169 (415)
Q Consensus        94 ~~~~~~~~~i~i~~g~~~a----l~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~  169 (415)
                      .+..+.+++++++.+++++    +.+++..+.++||+|++++|+|+.|...++..|.+++.++...++.+..+.+.+.+.
T Consensus        87 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~  166 (397)
T d3tata_          87 DHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLAT  166 (397)
T ss_dssp             SCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCHHHHHHH
T ss_pred             cCCcCCcCcEEEecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhccccchHHHHHH
Confidence            7777788999888776654    556666677999999999999999999999999999999998888888888887765


Q ss_pred             cC---CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccc--ccCCCCCeEEEccCc
Q 014936          170 AD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG--VFGSTVPILTLGSLS  244 (415)
Q Consensus       170 ~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~~~~~~i~~~s~s  244 (415)
                      +.   ++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++....+..  .....++++++.|+|
T Consensus       167 ~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~S  246 (397)
T d3tata_         167 LKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFS  246 (397)
T ss_dssp             HTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEECBCCH
T ss_pred             hhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEEecCc
Confidence            43   4678889999999999999999999999999999999999999999998754322221  123445789999999


Q ss_pred             cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHHHHHHHH
Q 014936          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       245 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~  318 (415)
                      |.|+++|+|+||++++...... ...+....... .....+++...|.++..++....     .++++..+++++++++.
T Consensus       247 K~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  325 (397)
T d3tata_         247 KIFSLYGERVGGLSVMCEDAEA-AGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQE  325 (397)
T ss_dssp             HHHTBTTTCCBCCEEECSSTTH-HHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCccccccccchhHHHH-HHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999987633111 00111111111 22335667778888877776532     24556667778888888


Q ss_pred             HHHHhhcC-CC--CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhH
Q 014936          319 CYNKIKEI-PC--ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSL  394 (415)
Q Consensus       319 l~~~l~~~-~~--~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l  394 (415)
                      +.+.|..+ ++  +. +..|.+|+|+|+.++          .+++.+|++++||.+.||.        |||+ +.+++++
T Consensus       326 l~~~L~~~~~~~~~~-~~~~~~G~F~~~~ls----------~e~~~~L~~e~~V~l~~g~--------Ri~~a~~~~~~i  386 (397)
T d3tata_         326 LVKVLSTEMPERNFD-YLLNQRGMFSYTGLS----------AAQVDRLREEFGVYLIASG--------RMCVAGLNTANV  386 (397)
T ss_dssp             HHHTTTTTCTTSCTT-HHHHCCSSBCCCCCC----------HHHHHHHTTTTCEECCSSS--------CCBTTSCCTTTH
T ss_pred             HHHHHHHhCCCCceE-EEcCCCceEEecCcC----------HHHHHHHHHhCCEEeCCCC--------EEEeccCCHHHH
Confidence            88888865 22  44 337899999997663          3567889999999999975        9999 5789999


Q ss_pred             HHHHHHHHHH
Q 014936          395 EECLDRIKSF  404 (415)
Q Consensus       395 ~~~l~~l~~~  404 (415)
                      +.+.++|+++
T Consensus       387 ~~~~~ai~~v  396 (397)
T d3tata_         387 QRVAKAFAAV  396 (397)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9988888765

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-42  Score=327.19  Aligned_cols=365  Identities=18%  Similarity=0.148  Sum_probs=265.0

Q ss_pred             cCCcchhhHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHH
Q 014936            9 DNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA   87 (415)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia   87 (415)
                      ..+++  +|..+...+.++.     ..+.|||+.|.. +.....++.+.|++|..+.++....+.|++..|.++||++++
T Consensus         7 ~~p~d--~i~~~~~~~~~d~-----~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia   79 (396)
T d2q7wa1           7 AAPAD--PILGLADLFRADE-----RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQ   79 (396)
T ss_dssp             CCCC------------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHH
T ss_pred             cCCCC--hHHHHHHHHhccC-----CCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHH
Confidence            34444  5555554443332     344699999931 112235667899999998887766668999999999999999


Q ss_pred             HHHhhhCCCCCCCCcE--EEeCChHHHHHHHHH--HhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCCh
Q 014936           88 EYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMA--LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDL  163 (415)
Q Consensus        88 ~~~~~~~~~~~~~~~i--~i~~g~~~al~~~~~--~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  163 (415)
                      +|+.+..+....++.+  +++.|++.++.+++.  ...++||.|++++|+|+.|...++..|++++.++...++++..+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~  159 (396)
T d2q7wa1          80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF  159 (396)
T ss_dssp             HHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECH
T ss_pred             HHHHhhcCCcccccceeeeccchHHHHHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEeccccccccccccc
Confidence            9998766655555543  456666666555544  346899999999999999999999999999999987777766676


Q ss_pred             hHHHhh---cCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc--cCCCCCeE
Q 014936          164 DDIESL---ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FGSTVPIL  238 (415)
Q Consensus       164 ~~l~~~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~~~i  238 (415)
                      ..+++.   ..++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++........  ....++++
T Consensus       160 ~~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~  239 (396)
T d2q7wa1         160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELI  239 (396)
T ss_dssp             HHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEE
T ss_pred             chHHHHHHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhccccc
Confidence            666554   3456788899999999999999999999999999999999999999999987543322211  12335678


Q ss_pred             EEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-----ccccCCchhHHHHHHHHhhCCCc-----HHHHHHH
Q 014936          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQAAVPSILQQPD-----EVFFKKT  308 (415)
Q Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~  308 (415)
                      ++.|+||.|+++|+|+||++++...  .   +........     .....+++...|.++..++....     ++++++.
T Consensus       240 ~~~s~sk~~~~~G~R~G~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~  314 (396)
T d2q7wa1         240 VASSYSKNFGLYNERVGACTLVAAD--S---ETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDM  314 (396)
T ss_dssp             EEEECTTTTTCGGGCCEEEEEECSS--H---HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC
T ss_pred             ccccccccccccCCCccccccchhH--H---HHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence            8899999999999999999997632  1   111222111     12235677778888887776532     3667788


Q ss_pred             HHHHHHHHHHHHHHhhcCC-C--CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEE
Q 014936          309 LNLLKQSVDICYNKIKEIP-C--ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRV  385 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~~-~--~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi  385 (415)
                      +++++++++.+.+.|+++. .  +. +..+.+|+|+|+.++          .+++.+|++++||.+.||+        ||
T Consensus       315 ~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~G~F~~~~l~----------~e~~~~L~~e~gV~~~~g~--------Ri  375 (396)
T d2q7wa1         315 RQRIQRMRQLFVNTLQEKGANRDFS-FIIKQNGMFSFSGLT----------KEQVLRLREEFGVYAVASG--------RV  375 (396)
T ss_dssp             -CHHHHHHHHHHHHHHHTTCCSCCT-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTTC--------EE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCcc-eecCCCeEEEeeCCC----------HHHHHHHHHhCCEEECCCC--------EE
Confidence            8899999999999999862 1  33 236788999997663          3568889999999999875        99


Q ss_pred             Eee-CChhhHHHHHHHHHHH
Q 014936          386 TFA-VDPYSLEECLDRIKSF  404 (415)
Q Consensus       386 ~~~-~~~~~l~~~l~~l~~~  404 (415)
                      |++ .++++++.++++|.++
T Consensus       376 ~~a~l~~~~i~~~~~ai~~v  395 (396)
T d2q7wa1         376 NVAGMTPDNMAPLCEAIVAV  395 (396)
T ss_dssp             EGGGCCTTTHHHHHHHHHHH
T ss_pred             EecCCCHHHHHHHHHHHHHh
Confidence            994 6899999999888875

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=2.6e-41  Score=317.63  Aligned_cols=360  Identities=14%  Similarity=0.138  Sum_probs=267.2

Q ss_pred             hHHHHHHHhhhcccccccCcceeEecccCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhC
Q 014936           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL   94 (415)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~   94 (415)
                      +|..+...+.++-     ....|||+.|.. +.....++.+.|++|+++.++......|++..|.++||+++++++.+..
T Consensus        12 ~i~~l~~~~~~d~-----~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~   86 (394)
T d2ay1a_          12 KILALMGEFRADP-----RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDG   86 (394)
T ss_dssp             SHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGG
T ss_pred             hHHHHHHHHhCCC-----CCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccc
Confidence            6666666555443     345699999942 1122356678999999998876655689999999999999999998655


Q ss_pred             CCCCCCCcEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhh---c
Q 014936           95 PYKLTPNDVFVTSGC-TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL---A  170 (415)
Q Consensus        95 ~~~~~~~~i~i~~g~-~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~---~  170 (415)
                      +.....+.+++++|+ ..++.+.+..+.++||.|++++|+|+.|...++..|.+++.++...++.+..+.+.+++.   .
T Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~  166 (394)
T d2ay1a_          87 LKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAA  166 (394)
T ss_dssp             CCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTC
T ss_pred             cccccccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhHHHHHhhc
Confidence            533334444444443 344566666677999999999999999999999999999999987666666666665543   3


Q ss_pred             CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccc--cCCCCCeEEEccCccccC
Q 014936          171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FGSTVPILTLGSLSKRWI  248 (415)
Q Consensus       171 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~~  248 (415)
                      .++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++....+...  .....+++++.|+||.++
T Consensus       167 ~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~  246 (394)
T d2ay1a_         167 KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFG  246 (394)
T ss_dssp             CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTT
T ss_pred             ccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhccccccccccccccc
Confidence            456778888999999999999999999999999999999999999999987643332221  122346788999999999


Q ss_pred             CCCceEEEEEeeCCCCCCChHHHHHHHH----hh-ccccCCchhHHHHHHHHhhCCCc-----HHHHHHHHHHHHHHHHH
Q 014936          249 VPGWRLGWFVTTDPCGMFRKPKVVERMK----KY-FDILGDPATFIQAAVPSILQQPD-----EVFFKKTLNLLKQSVDI  318 (415)
Q Consensus       249 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~~~~~  318 (415)
                      ++|+|+||++++...  .   +......    .. ......++...|..+...+.+..     .++++.++++++++++.
T Consensus       247 ~~G~R~G~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~  321 (394)
T d2ay1a_         247 IYRERTGCLLALCAD--A---ATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQ  321 (394)
T ss_dssp             CGGGCEEEEEEECSS--H---HHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccchhhchhH--H---HHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999997632  1   1111111    11 12234566677777776665422     35667778889999999


Q ss_pred             HHHHhhcCCC---CcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhH
Q 014936          319 CYNKIKEIPC---ISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSL  394 (415)
Q Consensus       319 l~~~l~~~~~---~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l  394 (415)
                      +.+.|+++++   +. +..|++|+|+|+.++          .+++++|++++||.+.||.        |||+ +.+++++
T Consensus       322 l~~~L~~~~~~~~~~-~~~~~~G~F~~~~ls----------~~~~~~L~~~~~V~~~~g~--------Ri~~a~l~~~~i  382 (394)
T d2ay1a_         322 LAGELRDLSGSDRFG-FVAEHRGMFSRLGAT----------PEQVKRIKEEFGIYMVGDS--------RINIAGLNDNTI  382 (394)
T ss_dssp             HHHHHHHHHTSSTTT-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTTH
T ss_pred             HHHHHHHhCCCCcee-eECCCceeEEecCcC----------HHHHHHHHHhCCEEecCCC--------EEEecCCCHHHH
Confidence            9999987521   44 347899999997663          4567889899999999874        9999 5799999


Q ss_pred             HHHHHHHHHH
Q 014936          395 EECLDRIKSF  404 (415)
Q Consensus       395 ~~~l~~l~~~  404 (415)
                      +.+.++|.++
T Consensus       383 ~~l~~ai~~v  392 (394)
T d2ay1a_         383 PILARAIIEV  392 (394)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9888888764

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=100.00  E-value=7.3e-39  Score=299.27  Aligned_cols=330  Identities=15%  Similarity=0.138  Sum_probs=246.2

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHh-cC-CCCCCCCCC----CcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALL-SE-KFNGYAPTA----GLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~-~~-~~~~y~~~~----g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      ++-++|+++|+|...+    +-..+.+...+.. .+ +...|....    -.++|++.|++++...-+...+..+|++++
T Consensus        55 ~~~~~~~~~gdp~~~~----~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG~  130 (425)
T d2hoxa1          55 QGCSADVASGDGLFLE----EYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV  130 (425)
T ss_dssp             TTCCEECCSCCCGGGH----HHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred             CCceeeCCCCCCCCCC----HHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEECC
Confidence            5568899999987432    1122222222221 12 112343221    238999999999876555555666899999


Q ss_pred             ChHHHHHHHHHHh--------cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEe
Q 014936          108 GCTQAIDVAMALL--------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI  179 (415)
Q Consensus       108 g~~~al~~~~~~l--------~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i  179 (415)
                      |+++++++++.+|        .+|||+|+++.|+|+.|...++..+.+...+        .+|.+.+++.++++++++++
T Consensus       131 Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~~--------~~D~~~~~~~~~~~~~ii~l  202 (425)
T d2hoxa1         131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIEMV  202 (425)
T ss_dssp             HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEEEE
T ss_pred             CHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCcc--------CCCHHHHHhhCCCCceEEEE
Confidence            9999999999999        4689999999999999999998888765544        35778888888889999999


Q ss_pred             cCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       180 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      ++||||||.+..          +..+++.+|.||+|.+..+.     ++.  ...+++|++.||||.|+++|+|+||+++
T Consensus       203 ~sPnNPtG~l~~----------~v~~~~~~I~DEaY~~~~f~-----~~~--~~~~~~Ivl~S~SK~fglaGlRiGw~i~  265 (425)
T d2hoxa1         203 TSPNNPEGLLRH----------AVIKGCKSIYDMVYYWPHYT-----PIK--YKADEDILLFTMSKFTGHSGSRFGWALI  265 (425)
T ss_dssp             ESSCTTTCCCCC----------CSSTTCEEEEECTTCSTTTS-----CCC--SCBCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred             ECCCCCCcchhh----------hhhhCCEEEEeccccCcccc-----chh--hhcCCeEEEEeCHHhccCcchheeeEEe
Confidence            999999998732          33568999999999753332     222  2335689999999999999999999988


Q ss_pred             eCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCC----------cHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014936          260 TDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQP----------DEVFFKKTLNLLKQSVDICYNKIKEIPC  328 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~~~l~~~~~  328 (415)
                      ++       +.+++.+.... ..+.+++.++|.++..+|+..          ..++++..++.++++++.+.+.|++.+.
T Consensus       266 ~~-------~~i~~~~~~~~~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~  338 (425)
T d2hoxa1         266 KD-------ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR  338 (425)
T ss_dssp             CC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred             CC-------HHHHHHHHHhhccCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            65       24777776653 335678889998888887531          1356777889999999999999987644


Q ss_pred             CcCCC-------------CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEEeeCChhhH
Q 014936          329 ISCPH-------------KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVTFAVDPYSL  394 (415)
Q Consensus       329 ~~~~~-------------~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~l  394 (415)
                      +....             .+..+.|.|+++..       ++.+++.++|+++||.++||+.|+. ++++|||+..+++++
T Consensus       339 ~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~~~-------~~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~~~~e~l  411 (425)
T d2hoxa1         339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDF  411 (425)
T ss_dssp             EECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHH
T ss_pred             ceeeccCCccceeeeeeccCCCcceeeeeCCC-------ChHHHHHHHHHhCCEEEEechhcCCCCCEEEEEecCCHHHH
Confidence            32111             23445578877753       2344567788899999999999986 689999999999999


Q ss_pred             HHHHHHHHHHHH
Q 014936          395 EECLDRIKSFYQ  406 (415)
Q Consensus       395 ~~~l~~l~~~~~  406 (415)
                      ++++++|+++++
T Consensus       412 d~~l~rL~~~v~  423 (425)
T d2hoxa1         412 DQLMYYLKDMVK  423 (425)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.97  E-value=1.6e-30  Score=240.45  Aligned_cols=332  Identities=15%  Similarity=0.097  Sum_probs=220.1

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      ...++++.-...    +++..+...+++    ..    .+++..+.+++++..+++++     ....+++++++|+++++
T Consensus        19 ~~~i~~~~gl~~----~~~~~~~~~~~~----~~----~~~~~~~~~~l~~~~~~~~~-----~~~~e~~~~~~~~~~a~   81 (366)
T d2aeua1          19 RDALYDLSGLSG----GFLIDEKDKALL----NT----YIGSSYFAEKVNEYGLKHLG-----GDENDKCVGFNRTSSAI   81 (366)
T ss_dssp             GGGCEECSSCCC----CCCCCHHHHHHH----TS----TTHHHHHHHHHHHHHHHHHT-----CCTTEEEEEESSHHHHH
T ss_pred             cchHhhhccCCC----CCCccHHHHHHH----HH----hcCchhhHHHHHHHHHHHcc-----CCCccEEEEeCCHHHHH
Confidence            445677764432    245556544433    21    12333456788888888874     23557899999999999


Q ss_pred             HHHHHHhcCCCCEEEEc-CCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          114 DVAMALLSRPGANILLP-RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~-~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                      ..++.++.++++.|+++ .|+|.++...++..|++++.  +       -|+++++++++++|+++++++|+||+  .++.
T Consensus        82 ~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~--~-------~d~e~l~~~i~~~tk~i~~~~p~n~~--~~~~  150 (366)
T d2aeua1          82 LATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYFE--S-------DKVGEILNKIDKDTLVIITGSTMDLK--VIEL  150 (366)
T ss_dssp             HHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEEE--E-------SCHHHHHTTCCTTEEEEEECBCTTSC--BCCH
T ss_pred             HHHHHHhCCCCEEEEecCCCcchhHHHHHHhcCCeEEC--C-------CCHHHHHHhcCCCceEEEEEecCCCC--cCCH
Confidence            99999986544444544 68999999999999987543  2       27999999999999999999999985  4567


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++++|+++|++||+++++||+|+.+.+...........+.+   +++.|+||.  ++|+|+||+++++        +++
T Consensus       151 ~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~~d---i~~~S~sK~--~~g~~~G~i~~~~--------~~i  217 (366)
T d2aeua1         151 ENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGAD---LVVTSTDKL--MEGPRGGLLAGKK--------ELV  217 (366)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCS---EEEEETTSS--SSSCSCEEEEEEH--------HHH
T ss_pred             HHHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcCce---EEEeccccc--ccccceeEEEecH--------HHH
Confidence            899999999999999999999998776653333332233333   788899997  5689999999976        788


Q ss_pred             HHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH----HHHHHHHHhhcCCCCcC-CCCCCCceEEEEecC
Q 014936          273 ERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ----SVDICYNKIKEIPCISC-PHKPEGSMAVMLKLN  346 (415)
Q Consensus       273 ~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~~~~~-~~~p~~g~~~~~~l~  346 (415)
                      +.++... ....+.+++.|.++.+.|+......+++..+..++    ..+.+.......+++.. ...+.++.++|....
T Consensus       218 ~~~~~~~~~~g~~~~~~~~~a~~~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (366)
T d2aeua1         218 DKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVY  297 (366)
T ss_dssp             HHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEE
T ss_pred             HHHHHHHhcccccCCHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhccccccccccCcccccCccchhccCCC
Confidence            8887764 34456778888888887764332222332222222    22333333333333221 113345566665543


Q ss_pred             ccccCCCCCHHHHHHHHHhhcCeEEEcCCCC-CCCCeEEEEeeC-Chh--hHHHHHHHHHHHHH
Q 014936          347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAV-GLKNWLRVTFAV-DPY--SLEECLDRIKSFYQ  406 (415)
Q Consensus       347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-~~~~~iRi~~~~-~~~--~l~~~l~~l~~~~~  406 (415)
                      ........++.+++..+++++||.+.||..| +..+++||+++. +.+  +.+..++.|.+.++
T Consensus       298 ~~~~~~~~~~~~~a~~Ll~~~gV~~ip~~~~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK  361 (366)
T d2aeua1         298 KDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIK  361 (366)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHH
T ss_pred             cceeecccCHHHHHHHHHHhCCEEEEECCCCCCCCCEEEEeccccchhhCCHHHHHHHHHHHHH
Confidence            2111111235678889999999999999877 346899999964 222  23444444444443

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.97  E-value=8.5e-29  Score=227.92  Aligned_cols=331  Identities=16%  Similarity=0.113  Sum_probs=242.7

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      +++++||++++   +.++..+|+++++..++++.-      .-..++...-+.+|++.+|+|+        ..+..++++
T Consensus        44 ~~~~~~FsSnd---YLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~--------g~e~all~~  112 (396)
T d2bwna1          44 KQDITVWCGND---YLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH--------QKEAALVFS  112 (396)
T ss_dssp             EEEEEECSCSC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT--------TCSEEEEES
T ss_pred             CeEEEEEEccc---ccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHh--------CCCceeeee
Confidence            57899999999   677888999999999988741      1122333344678999999998        467888889


Q ss_pred             ChHHHHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc---CC-CceEEEecC
Q 014936          108 GCTQAIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA---DQ-NTVALVIIN  181 (415)
Q Consensus       108 g~~~al~~~~~~l--~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~---~~-~~~~v~i~~  181 (415)
                      +|..++..++.++  .++||.|+.+.-.|.++.+.++..++++..++++       |++++++.+   .+ +++.|++..
T Consensus       113 sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hn-------d~~~l~~l~~~~~~~~~~~iv~eg  185 (396)
T d2bwna1         113 SAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES  185 (396)
T ss_dssp             CHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred             cchHHHHHHHHHHhcccCCCceeehhhhhhccchhhhccccCceEeecc-------hHHHhhhHHhhhcccCceeEEEEe
Confidence            9999999888887  4788999999999999999999999999988763       455555443   33 345555556


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC-CCCeEEEccCccccCCCCceEEEEEee
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      ..+..|.+.|   +++|+++|++||+++++||+|+.++++..+......++. ....++++||||+|+..|   |++.++
T Consensus       186 vySmdGd~ap---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~  259 (396)
T d2bwna1         186 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS  259 (396)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred             eccCcccccc---cHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchh
Confidence            6788999955   777788888999999999999999988655444433322 223588999999999998   998886


Q ss_pred             CCCCCCChHHHHHHHHhhcc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC
Q 014936          261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG  337 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~  337 (415)
                      +        ++++.++....   ++...++....++.+.++.......++.++.++.+.+++.+.+..+ ++. + .+..
T Consensus       260 ~--------~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~-~~~~  328 (396)
T d2bwna1         260 A--------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-I-IDHG  328 (396)
T ss_dssp             H--------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCS
T ss_pred             H--------HHHHHHHhhcchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc-CCC-c-CCCC
Confidence            5        67777765521   2334455555555554443222445667788888999999999887 666 3 3445


Q ss_pred             ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          338 SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       338 g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      +..+.+.+...     ....++..++|+++||.+.+..++..   ...+||+++  +++++|+.+++.|+++
T Consensus       329 spIvpv~ig~~-----~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~lsa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         329 SHIVPVVIGDP-----VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             SSCEEEECCCH-----HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEeCccCCHHHHHHHHHHHHHh
Confidence            55555555431     12456667778888999987766654   357999993  7899999999999875

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=3.7e-28  Score=224.95  Aligned_cols=330  Identities=12%  Similarity=0.073  Sum_probs=241.8

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      ++++++||++++   +.++..+|+++++..+++++-      .-..++...-+.+|++.+|+|+        ..+..+++
T Consensus        36 ~g~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~--------g~e~al~~  104 (383)
T d1bs0a_          36 DDRQYLNFSSND---YLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL--------GYSRALLF  104 (383)
T ss_dssp             TTEEEEECSCCC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH--------TCSEEEEE
T ss_pred             CCeEEEEEEccc---ccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhc--------CCCceEEe
Confidence            467899999998   666778999999999998741      1122334445689999999998        56789999


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC---CCceEEEecCCC
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPG  183 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~  183 (415)
                      ++++.++..++.++..++|.|+++...|.++...++..+.++..+++       .|++++++.+.   +++.+|++..+.
T Consensus       105 ~SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~h-------nd~~~le~~l~~~~~~~~~vv~e~v~  177 (383)
T d1bs0a_         105 ISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVF  177 (383)
T ss_dssp             SCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBC
T ss_pred             cccchhhHHHHHhhcCCCceEEeeccccHHHhhccccCCCcceEecc-------hHHHHHHHHhcccCCCceEEEecCCC
Confidence            99999999999999999999999999999999999999999988876       36777776653   356677778889


Q ss_pred             CccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (415)
Q Consensus       184 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  263 (415)
                      +.+|.+.|   +++|.++|++||+++++||+|+.++++..+......++. ...+.+.|++|.++..|   |++.++.  
T Consensus       178 s~~G~i~p---l~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~-~~~~~~~t~~ka~g~~G---g~v~~~~--  248 (383)
T d1bs0a_         178 SMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSS--  248 (383)
T ss_dssp             TTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECH--
T ss_pred             CCCCcccc---hhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcCC-ccccccccccccccccc---cccccch--
Confidence            99999966   566667788999999999999999877554433333333 23466779999998888   8888865  


Q ss_pred             CCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE
Q 014936          264 GMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA  340 (415)
Q Consensus       264 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~  340 (415)
                            +.++.++...   ..+...++....++.+.++.......+.++++++++..++.+.|.++ ++. + .+..+.+
T Consensus       249 ------~~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~-~-~~~~s~I  319 (383)
T d1bs0a_         249 ------TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSAI  319 (383)
T ss_dssp             ------HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSSB
T ss_pred             ------hHHHHHHhhchhhhhcccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc-CCc-c-CCCCCCE
Confidence                  5667665542   22334455554555555443223556678888999999999999988 565 3 3344444


Q ss_pred             EEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          341 VMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       341 ~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      +.+.+...     ....++.+.| .++||.+.+..++..   ...+|++++  +++|+++.+++.|..+
T Consensus       320 i~v~~g~~-----~~a~~~~~~L-~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         320 QPLIVGDN-----SRALQLAEKL-RQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             CCEEEESH-----HHHHHHHHHH-HHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             EEEEECCH-----HHHHHHHHHH-HHCCceEEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence            43334321     1234555555 567999988665543   346999994  7899999999998764

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.96  E-value=6.9e-29  Score=230.07  Aligned_cols=323  Identities=12%  Similarity=0.120  Sum_probs=206.9

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCC---------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCC
Q 014936           53 TTHVATEAVAEALLSEKFNGYA---------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP  123 (415)
Q Consensus        53 ~~~~~~~a~~~~~~~~~~~~y~---------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~  123 (415)
                      .++++++++.+.........|.         .+.-+..+++.+|+++        ..|++++|+|+++|+.+++.+++++
T Consensus        14 l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~--------g~e~~~~t~g~t~a~~~~~~al~~~   85 (364)
T d2e7ja1          14 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL--------GCDVARVTNGAREAKFAVMHSLAKK   85 (364)
T ss_dssp             CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT--------TSSEEEEESSHHHHHHHHHHHHCCT
T ss_pred             CCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHh--------CcCEEEEECcHHHHHHHHHHHHhCC
Confidence            4678888887643211111111         1123466888899987        3578999999999999999999999


Q ss_pred             CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-----CceEEEecCCCCccccCCCHHHHHHH
Q 014936          124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKL  198 (415)
Q Consensus       124 gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i  198 (415)
                      ||.|+++.++|++....++..|+++..+|++...++.+|++++++++++     .+++|++++|+||||.+.+   +++|
T Consensus        86 gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---l~~I  162 (364)
T d2e7ja1          86 DAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKI  162 (364)
T ss_dssp             TCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHHH
T ss_pred             CcEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---chhh
Confidence            9999999999999999999999999999987666788999999998854     3457889999999999955   7789


Q ss_pred             HHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh
Q 014936          199 AETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (415)
Q Consensus       199 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~  278 (415)
                      +++|++||+++++|++|+...+    ...+..++.+   ++++|+||+++++| ++||+++++.        +.+.+...
T Consensus       163 ~~ia~~~~i~livD~a~~~g~~----~~~~~~~g~D---~~~~S~~K~~~~~g-~~g~l~~~~~--------~~~~~~~~  226 (364)
T d2e7ja1         163 AKVCSEYDVPLLVNGAYAIGRM----PVSLKEIGAD---FIVGSGHKSMAASG-PIGVMGMKEE--------WAEIVLRR  226 (364)
T ss_dssp             HHHHHTTTCCEEEECTTTBTTB----CCCHHHHTCS---EEEEEHHHHSSCCS-SCEEEEECTT--------TTTTTTCB
T ss_pred             eeccccccchhhccccchhhhh----hhcccccccc---eeeeccccccCCCC-CEEEEEECHH--------HHHHHHhh
Confidence            9999999999999999976332    2233344433   78889999987776 6899998763        22222111


Q ss_pred             c---------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCCCCceEEEEecCcc
Q 014936          279 F---------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP-HKPEGSMAVMLKLNLS  348 (415)
Q Consensus       279 ~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~l~~~  348 (415)
                      .         ............++.+.++.. .+.++...+. .++++++.+.++++ ++... ..|......+...+..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~-~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~  303 (364)
T d2e7ja1         227 SEKYKNKEVELLGCTARGATIITLMASFPHV-RERIKRWDEE-VEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAEVL  303 (364)
T ss_dssp             CSSCTTSBGGGTTCCCCSHHHHHHHHHHHHH-HHHGGGHHHH-HHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECHHH
T ss_pred             ccccCcccccccccccchhHHHHHHHHHHHH-HHHHHHHHHH-HHHHHHHHHHHHHc-CCeecCCCCCCcceEEEeccch
Confidence            0         001111222223333333211 1222333333 34556677777776 44322 1233333333333210


Q ss_pred             c--cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-eCChhhHHHHHHHHHHHHHHH
Q 014936          349 L--LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-AVDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       349 ~--~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .  .........+....+.+.++..   ..++....+|++. +.++++++.++++|+++++++
T Consensus       304 ~~~~~~~~~~~~~~~~~l~~~~~~~---~~~g~~~~~~~~~~~~t~edid~~~~~l~ei~~~y  363 (364)
T d2e7ja1         304 YEISKKAKGGRFFLYRELKSRKIHG---IKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY  363 (364)
T ss_dssp             HHHHHHSSSGGGHHHHHHHHTTEEC---SCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhhccchHHHHHHHhcCCce---ecCCCcceEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence            0  0000112223344455667653   2233456778876 678999999999999998764

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=9.5e-28  Score=224.44  Aligned_cols=329  Identities=13%  Similarity=0.135  Sum_probs=222.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCC--C----------cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHH
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTA--G----------LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA  118 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~--g----------~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~  118 (415)
                      .++++.+++++.+.+....  .|+++.  .          +.++|+.+|+++      ++++++|++++|+|++++.++.
T Consensus        12 ~p~~~~v~ea~~~~~~~~~--~~~np~~~~~~~~~~~~~~~~~~R~~iA~~l------g~~~~~I~~~~~~t~~l~~~~~   83 (391)
T d1p3wa_          12 TPVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPREIVFTSGATESDNLAIK   83 (391)
T ss_dssp             CCCCHHHHHHHHTTTSTTS--CCCCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESSHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHhcc--ccCCCchhhhHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEEECCHHHHHHHHHh
Confidence            4678999999998876432  344321  1          346888999998      5789999999999999998888


Q ss_pred             Hhc----CCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCC
Q 014936          119 LLS----RPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (415)
Q Consensus       119 ~l~----~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~  191 (415)
                      ++.    ++||+|++.++.|+++...   ++..|+++..++.+.  .+.+|++.++++++++|++|++++++||||.++|
T Consensus        84 ~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~~~~~i~~~T~lv~is~~~n~tG~~~~  161 (391)
T d1p3wa_          84 GAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQD  161 (391)
T ss_dssp             HHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEEEEECCSBCTTTCCBCC
T ss_pred             hhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCC--CCeEcHHHHHHhCCCCcEEEEEECCCCCCeeECC
Confidence            753    7999999999999987554   345699999998753  3458999999999999999999999999999977


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHH
Q 014936          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (415)
Q Consensus       192 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~  271 (415)
                         +++|+++|+++|+++++|.+|+...    .+..+...+.+   +++.|.+|+++.+|  .|++..++.......+..
T Consensus       162 ---~~~I~~~~~~~~~~~ivD~~~~~g~----~~~d~~~~~~D---~~~~s~~k~~g~~g--~g~~~~~~~~~~~~~~~~  229 (391)
T d1p3wa_         162 ---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLSQLKVD---LMSFSGHKIYGPKG--IGALYVRRKPRVRIEAQM  229 (391)
T ss_dssp             ---HHHHHHHHHHHTCEEEEECTTTBTT----BCCCTTTSCCS---EEEEESTTTTSCSS--CEEEEECBTTBCCCCCSS
T ss_pred             ---HHHHHHHhccCCcEEEEeeccccCC----ccccchhcccc---ccccccccccCCCc--eEEEEEecchhcccCCcc
Confidence               5678888999999999999998743    33334444443   77789999987777  577777543211100000


Q ss_pred             HHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC-C-CCceEEEEecCccc
Q 014936          272 VERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHK-P-EGSMAVMLKLNLSL  349 (415)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p-~~g~~~~~~l~~~~  349 (415)
                      ...........+..+.....++...+... .+......+++++.+..+.+.|..+++...... + .....+.+.++.  
T Consensus       230 ~gg~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--  306 (391)
T d1p3wa_         230 HGGGHERGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNY--  306 (391)
T ss_dssp             CSSCTTTTTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETT--
T ss_pred             cCCccccCcccCcchhhhhhhhhhhhhHH-HHHhhHHHHHHHHHHHHHHHHHHhhcCeeecccccccCceEEEEEeCC--
Confidence            00000001112333444444444443321 234555567788888888898887755331111 1 122233333332  


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                          .....+...+   +++.++.|..|..                   .++||||++  ++++|++.+++.|+++++++
T Consensus       307 ----~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~l  379 (391)
T d1p3wa_         307 ----VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRL  379 (391)
T ss_dssp             ----SCHHHHHHHT---TTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ----CChHHHHHHh---CCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence                2455554443   4677766655421                   257999996  58999999999999999987


Q ss_pred             HHH
Q 014936          409 AKQ  411 (415)
Q Consensus       409 ~~~  411 (415)
                      ++.
T Consensus       380 r~~  382 (391)
T d1p3wa_         380 RDL  382 (391)
T ss_dssp             HHS
T ss_pred             HHh
Confidence            753

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.4e-27  Score=222.35  Aligned_cols=334  Identities=13%  Similarity=0.082  Sum_probs=236.9

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC------CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      +|+.++||++++   +.++..+|.+++++.++++.......      +...-+.+|++.+|+|+        ..+.++++
T Consensus        43 dG~~~l~f~s~d---YLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~--------g~e~al~~  111 (401)
T d1fc4a_          43 DGSHVINFCANN---YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL--------GMEDAILY  111 (401)
T ss_dssp             TSCEEEECCCSC---TTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH--------TCSEEEEE
T ss_pred             CCCEEEEEEccc---cccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhh--------cCCceEEe
Confidence            578899999887   56677899999999998875221111      12344678999999998        56889999


Q ss_pred             CChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhc---C---CCceEEEec
Q 014936          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA---D---QNTVALVII  180 (415)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~---~---~~~~~v~i~  180 (415)
                      +++++++..++.++.+++|.|+++..+|.++...+...+.++..+++       .|.+++++.+   +   ..+.++++.
T Consensus       112 ~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~-------~d~~~le~~~~~~~~~~~~~~liv~e  184 (401)
T d1fc4a_         112 SSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD  184 (401)
T ss_dssp             SCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred             cchhhhhHHHHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEcC-------CChHHHHHHHHHhhhcccCceEEEEc
Confidence            99999999999999999999999999999999999999999888765       2455554433   2   123444444


Q ss_pred             CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCC-CCeEEEccCccccCCCCceEEEEEe
Q 014936          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      ...+..|.+.   +++++.++|++||+++|+||+|+.+.++..+......++.. +..++++|++|.++.  ...|++.+
T Consensus       185 gv~s~~G~~~---~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg--~~Gg~v~g  259 (401)
T d1fc4a_         185 GVFSMDGVIA---NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGG--ASGGYTAA  259 (401)
T ss_dssp             SEETTTTEEC---CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCS--SSCEEEEE
T ss_pred             CCCCCCCchh---hhhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeeccccccc--CCcccccC
Confidence            4466677774   48888888999999999999999998876544332222221 234788999999743  33488887


Q ss_pred             eCCCCCCChHHHHHHHHhhc---cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC
Q 014936          260 TDPCGMFRKPKVVERMKKYF---DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE  336 (415)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~  336 (415)
                      +.        ++++.++...   ..+...++....++...++..  ...++++++++++.+++.+.+... ++. . ...
T Consensus       260 ~~--------~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~~--~~~~~~~~~l~~~~~~~~~~l~~~-g~~-~-~~~  326 (401)
T d1fc4a_         260 RK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV--EAGSELRDRLWANARQFREQMSAA-GFT-L-AGA  326 (401)
T ss_dssp             CH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHT-TCC-B-CCS
T ss_pred             CH--------HHHHHHHcCChhhhhcCCCCHHHHHHHHhhhccc--ccCHHHHHHHHHHHHHHHhhhccc-CCc-c-CCC
Confidence            54        6777766442   133445555555555555431  234567899999999999999887 555 3 233


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC---CCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL---KNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .+.++.+.+...     ....++...| .++||.+.+-.++..   ...+|++++  +++|+++.+++.|+++.+++
T Consensus       327 ~~pIv~v~~~~~-----~~a~~~~~~L-~~~Gi~v~~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~l  397 (401)
T d1fc4a_         327 DHAIIPVMLGDA-----VVAQKFAREL-QKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             SSSEEEEEEECH-----HHHHHHHHHH-HHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEEECCH-----HHHHHHHHHH-HHCCceEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            344444444321     1234566665 567999877655443   346999994  79999999999999998764

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=8.4e-27  Score=218.46  Aligned_cols=335  Identities=15%  Similarity=0.157  Sum_probs=240.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--C------CCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP--T------AGLPLTRRAIAEYLSRDLPYKLTPNDVF  104 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~--~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~  104 (415)
                      .+++++-|+.+..     .+.++.+.+++.+.++....+....  .      .-+.+.|+.+|++++     ...+++|+
T Consensus        19 ~~~~~iYld~a~~-----~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~-----~~~~~~i~   88 (405)
T d1jf9a_          19 NGLPLAYLDSAAS-----AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN-----ARSAEELV   88 (405)
T ss_dssp             TTEECEECCTTTC-----CCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT-----CSCGGGEE
T ss_pred             CCCCeEEEeCccc-----cCCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcC-----CCCccccc
Confidence            3567778877652     4668899999998876532211111  0      124567888888883     13468999


Q ss_pred             EeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcchH----HHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936          105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (415)
Q Consensus       105 i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (415)
                      +++|+|++++.++.++    .++||+|++.+..|++..    ..++..|+++..+|++++  ..+|++.++++++++|++
T Consensus        89 ~~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~--g~~~~~~~~~~i~~~t~l  166 (405)
T d1jf9a_          89 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQLETLPTLFDEKTRL  166 (405)
T ss_dssp             EESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT--SCBCGGGHHHHCCTTEEE
T ss_pred             ccCcHHHHHHHHHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCC--CcCCHHHHHHhccCCcEE
Confidence            9999999999888763    478999999999998744    455677999999998754  358999999999999999


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~  256 (415)
                      +++++.+|.||.++|   +++|+++|+++|+++++|.+++.    |..+..+..++.+   +++.|++|++|.+|  +|+
T Consensus       167 v~~~~v~~~tG~~~p---i~~i~~~~~~~g~~~~vD~~q~~----g~~~id~~~~~~D---~~~~s~hK~~Gp~G--~g~  234 (405)
T d1jf9a_         167 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAV----MHHPVDVQALDCD---FYVFSGHKLYGPTG--IGI  234 (405)
T ss_dssp             EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EEEEEGGGTTSCSS--CEE
T ss_pred             EEEecCCCcccccCc---hHHhhhHHHHcCCeeecccceec----cccccchhhcCCc---eeeccccccccCCC--cee
Confidence            999999999999966   67778888899999999999987    4344445556555   88889999987777  788


Q ss_pred             EEeeCCCCCCChHHHHHHHHh-----------------------hccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936          257 FVTTDPCGMFRKPKVVERMKK-----------------------YFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK  313 (415)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  313 (415)
                      ++.++        +..+.+..                       .....++.+.....++..+++...+...+...++..
T Consensus       235 l~v~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~  306 (405)
T d1jf9a_         235 LYVKE--------ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ  306 (405)
T ss_dssp             EEECH--------HHHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             eeech--------hhhcccCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence            87754        23222111                       001124666667777777766433344666777777


Q ss_pred             HHHHHHHHHhhcCCCCcCCCCCC-CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCCeEE
Q 014936          314 QSVDICYNKIKEIPCISCPHKPE-GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKNWLR  384 (415)
Q Consensus       314 ~~~~~l~~~l~~~~~~~~~~~p~-~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~~iR  384 (415)
                      ...+++.+.++.++..... .|. .+..+.+.++.      .+..++.. .|.++||.++.|+.|.        .++++|
T Consensus       307 ~L~~~~~~~l~~~~~~~~~-~~~~r~~ivsf~~~~------~~~~~~~~-~L~~~gI~v~~G~~c~~~~~~~~~~~g~iR  378 (405)
T d1jf9a_         307 NLMHYALSQLESVPDLTLY-GPQNRLGVIAFNLGK------HHAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCR  378 (405)
T ss_dssp             HHHHHHHHHHTTSTTEEEE-SCTTCCSEEEEEETT------CCHHHHHH-HHHHTTEECEEECTTCHHHHHHTTCSCEEE
T ss_pred             HHHHHHHhhhhcCCccccc-CCcCcCcEEEEEcCC------CCHHHHHH-HHHHCCcEEEccchhhhhHHHhcCCCCEEE
Confidence            7888888888887665522 332 23344455553      14555444 4578899999888763        368899


Q ss_pred             EEee--CChhhHHHHHHHHHHHHHH
Q 014936          385 VTFA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       385 i~~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      ||++  ++++|++.+++.|+++.+-
T Consensus       379 iS~~~ynt~eDid~l~~~l~~i~r~  403 (405)
T d1jf9a_         379 ASLAMYNTHEEVDRLVTGLQRIHRL  403 (405)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHh
Confidence            9995  6889999999999887764

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.95  E-value=4e-27  Score=219.40  Aligned_cols=330  Identities=15%  Similarity=0.145  Sum_probs=220.0

Q ss_pred             eEecccCCCCCCCCCCcHHHHHHHHHHHhc---CCCCCCCCC----CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLS---EKFNGYAPT----AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~---~~~~~y~~~----~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      +-|..+..     .+.++.+++++.+.+..   .....+...    .-..++|+.+|+++      ++++++|++|+|+|
T Consensus         9 ~yld~~~~-----~~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~i~~~~g~t   77 (381)
T d1elua_           9 TYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITDNVT   77 (381)
T ss_dssp             EECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEESSHH
T ss_pred             EEeeCCcc-----cCCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHh------CCCcccEEEECChH
Confidence            55666642     34567788888887652   111111111    12456788888888      56889999999999


Q ss_pred             HHHHHHHHHh-cCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCc
Q 014936          111 QAIDVAMALL-SRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP  185 (415)
Q Consensus       111 ~al~~~~~~l-~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np  185 (415)
                      +++++++.++ .++||+|+++++.|++...    .++..|+++..++.+.........+.+++.++++++++++++++||
T Consensus        78 ~a~~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n~  157 (381)
T d1elua_          78 TGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWN  157 (381)
T ss_dssp             HHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTT
T ss_pred             HHhhhcchhhhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhccccccccccccccc
Confidence            9999999998 4899999999999986443    4556799999998765433333467788889999999999999999


Q ss_pred             cccCCCHHHHHHHHHHHh-hcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCC
Q 014936          186 CGNVYSYQHLQKLAETAN-KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (415)
Q Consensus       186 tG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~  264 (415)
                      ||.++|.+++.+|++.+. .+++++++|.+++..    ..+..+..++.+   +++.|++|+++.| .++|++.+++.. 
T Consensus       158 tG~~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g----~~~~~~~~~~~D---~~~~s~~K~~~~p-~G~g~l~~~~~~-  228 (381)
T d1elua_         158 TGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAG----SLPLDFSRLEVD---YYAFTGHKWFAGP-AGVGGLYIHGDC-  228 (381)
T ss_dssp             TCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBT----TBCCCTTTSCCS---EEEEESSSTTCCC-TTCEEEEECTTT-
T ss_pred             ccccchhhHHHHHHhhcccccccccccccccccc----cccccccccccc---ccccccccccccc-chhhHHHhhHHH-
Confidence            999988665555444322 147999999999873    333344444443   8888999996543 347888775522 


Q ss_pred             CCChHHHHHHHHh-----------------------hccccCCchhHHHHHHHHhhCCCcHH-HHHHHHHHHHHHHHHHH
Q 014936          265 MFRKPKVVERMKK-----------------------YFDILGDPATFIQAAVPSILQQPDEV-FFKKTLNLLKQSVDICY  320 (415)
Q Consensus       265 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~  320 (415)
                             .+.++.                       .....++.+.....++.++++..... ..+.+.++..++++++.
T Consensus       229 -------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~  301 (381)
T d1elua_         229 -------LGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLW  301 (381)
T ss_dssp             -------GGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             -------HHhcCcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHH
Confidence                   121110                       00112345555555555555432211 13455678888899999


Q ss_pred             HHhhcCCCCcCCC--CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHH
Q 014936          321 NKIKEIPCISCPH--KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEE  396 (415)
Q Consensus       321 ~~l~~~~~~~~~~--~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~  396 (415)
                      +.|+++|++.++.  .|.++ ++++.++.     ......+ ...|+++||.++.   ++.++++|+|++  ++.+|++.
T Consensus       302 ~~L~~~~~~~~~~~~~~~~~-~vsf~~~~-----~~~~~~i-~~~L~~~gi~v~~---~~~~~~lRis~~~~nt~edid~  371 (381)
T d1elua_         302 RGLNQLPHVHCLATSAPQAG-LVSFTVDS-----PLGHRAI-VQKLEEQRIYLRT---IADPDCIRACCHYITDEEEINH  371 (381)
T ss_dssp             HHHHHSTTEEESCSSCCSSS-EEEEEECS-----SSCHHHH-HHHHHHTTEECEE---ETTTTEEEEECCTTCCHHHHHH
T ss_pred             HHHhcCCCeEecCCCCcccc-EEEEEcCC-----CCCHHHH-HHHHHhCCcEEEe---cCCCCEEEEecCCCCCHHHHHH
Confidence            9999998877442  23333 55555542     1233444 4566888998764   234689999995  58899999


Q ss_pred             HHHHHHHH
Q 014936          397 CLDRIKSF  404 (415)
Q Consensus       397 ~l~~l~~~  404 (415)
                      +++.|+++
T Consensus       372 ll~~l~e~  379 (381)
T d1elua_         372 LLARLADF  379 (381)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHHhh
Confidence            99998764

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.94  E-value=5e-25  Score=206.49  Aligned_cols=336  Identities=13%  Similarity=0.162  Sum_probs=241.5

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--C------CCcHHHHHHHHHHHhhhCCCCCC-CCcE
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP--T------AGLPLTRRAIAEYLSRDLPYKLT-PNDV  103 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~--~------~g~~~lr~~ia~~~~~~~~~~~~-~~~i  103 (415)
                      ++++++-|+.+..     .++++.+.+++.+.+.....+....  .      .-+++.|+.+|+++      +++ ++.+
T Consensus        19 ~~~~~iYld~a~~-----~~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~ll------ga~~~~~i   87 (408)
T d1t3ia_          19 NGHPLVYLDNAAT-----SQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI------NARSPREI   87 (408)
T ss_dssp             TTEECEECBTTTC-----CCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT------TCSCGGGE
T ss_pred             CCCCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCcccE
Confidence            4667888888863     4568899999999877532111110  0      12346788888888      455 5789


Q ss_pred             EEeCChHHHHHHHHHHh----cCCCCEEEEcCCCCcchHH----HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCce
Q 014936          104 FVTSGCTQAIDVAMALL----SRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV  175 (415)
Q Consensus       104 ~i~~g~~~al~~~~~~l----~~~gd~vi~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  175 (415)
                      ++++++++++++++..+    .++|++|++.+-.|++...    .++..|..+..++.+.  ....+.+.+++.++++|+
T Consensus        88 ~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~l~~~~~~~t~  165 (408)
T d1t3ia_          88 VYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE--QESFDLEHFKTLLSEKTK  165 (408)
T ss_dssp             EEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT--TSSBCHHHHHHHCCTTEE
T ss_pred             EeecchHHHHHHHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeeccc--cccccHHHhhhccCCCce
Confidence            99999999999888763    4789999999999986543    4456799999998754  335789999999999999


Q ss_pred             EEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (415)
Q Consensus       176 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  255 (415)
                      +|.+++.+|.||..+|   +++|.++|+++|+++++|.+++.    |..+..+..++.+   +++.|.+|+++.+|  +|
T Consensus       166 lv~i~~~~~~tG~~~p---~~~i~~~~~~~g~~~ivDa~q~~----g~~~id~~~~~~D---~~~~s~hK~~gp~G--~g  233 (408)
T d1t3ia_         166 LVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSA----PHYPLDVQLIDCD---WLVASGHKMCAPTG--IG  233 (408)
T ss_dssp             EEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTCS---EEEEEGGGTTSCTT--CE
T ss_pred             EEEEecccccccccCc---HHHHhhhhhccCceeeeccceec----ccccccccccCCc---eEEeccccccCCCC--cc
Confidence            9999999999999977   56777888899999999999987    4444555566665   88889999876666  78


Q ss_pred             EEEeeCCCCCCChHHHHHHHHhh----------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHH
Q 014936          256 WFVTTDPCGMFRKPKVVERMKKY----------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLK  313 (415)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  313 (415)
                      +++.++        +........                      ....++.+.....++..+++...+...++..++..
T Consensus       234 ~l~v~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~  305 (408)
T d1t3ia_         234 FLYGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEV  305 (408)
T ss_dssp             EEEECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             ccccch--------hhhhcCCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            888754        343332111                      01134566666777777775433345667778888


Q ss_pred             HHHHHHHHHhhcCCCCcCCCCC----CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC--------CCC
Q 014936          314 QSVDICYNKIKEIPCISCPHKP----EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG--------LKN  381 (415)
Q Consensus       314 ~~~~~l~~~l~~~~~~~~~~~p----~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--------~~~  381 (415)
                      ++.+++.+.++..+++..+..+    ..+..+.+.++.      .+..++... |.++||.++.|..|.        .++
T Consensus       306 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~------~~~~~v~~~-L~~~gI~v~~G~~c~~~~~~~~~~~g  378 (408)
T d1t3ia_         306 ELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAG------LHASDVATM-VDQDGIAIRSGHHCTQPLHRLFDASG  378 (408)
T ss_dssp             HHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETT------BCHHHHHHH-HHTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred             HHHhHHhhhhccCccccccCCCccccCcceEEEEEeCC------CCHHHHHHH-HhhCCcEEecCcccccHHHHhhcCCc
Confidence            8888999999888776533111    123344444542      245565555 578899999888764        367


Q ss_pred             eEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          382 WLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       382 ~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ++|||++  ++++|++.+++.|+++++.+
T Consensus       379 ~vRiS~~~ynt~~did~li~~L~~~~~~f  407 (408)
T d1t3ia_         379 SARASLYFYNTKEEIDLFLQSLQATIRFF  407 (408)
T ss_dssp             CEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             cEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            8999995  68999999999999988753

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=3e-26  Score=209.75  Aligned_cols=329  Identities=16%  Similarity=0.100  Sum_probs=211.9

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHH
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA  116 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~  116 (415)
                      ++||.+.+.     ..|+|++++|+.++...  ...|++.+...+|++.+|+++        ..+++++++||++|+.++
T Consensus         1 ~~~~~~~~~-----t~p~p~v~~A~~~a~~g--~~~yg~~p~~~~le~~lA~~~--------G~~~~~~~~sGt~A~~~a   65 (343)
T d1m6sa_           1 MIDLRSDTV-----TKPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF--------GKEAALFVPSGTMGNQVS   65 (343)
T ss_dssp             CEECSCGGG-----CCCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHH
T ss_pred             CcccccccC-----CCCCHHHHHHHHhhhcC--CcccCCCHHHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHH
Confidence            367765552     23478899999776432  225766667889999999998        346889999999999999


Q ss_pred             HHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC------ce-EEEecCCCCcc
Q 014936          117 MALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TV-ALVIINPGNPC  186 (415)
Q Consensus       117 ~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~-~v~i~~p~npt  186 (415)
                      ++++.++||.+++..+.|..+..   .....+..+..++.   .....+++.+++.+...      +. .++.+.++|+.
T Consensus        66 l~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  142 (343)
T d1m6sa_          66 IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPG---KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSG  142 (343)
T ss_dssp             HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECE---ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTT
T ss_pred             HHHHhccCCceeccccccceeeecccccccccceeecccc---ccCccCHHHHHHhhhhhhcccccccccccccccccCC
Confidence            99999999999999998875543   33344455555443   23456899988887642      23 34455668899


Q ss_pred             ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCC
Q 014936          187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF  266 (415)
Q Consensus       187 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  266 (415)
                      |.+++.+++.+|+++|+++++++++|+++..+...............  ....+.+.+|  +..|...|++....     
T Consensus       143 ~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~g~~~~~~~~~~-----  213 (343)
T d1m6sa_         143 GRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY--ADSVMFCLSK--GLCAPVGSVVVGDR-----  213 (343)
T ss_dssp             SBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHT--CSEEEEESSS--TTCCSSCEEEEECH-----
T ss_pred             ceecCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhccc--cccccccccc--cccccccccccccH-----
Confidence            99999999999999999999999999999876543221111111111  1133333333  45566677777643     


Q ss_pred             ChHHHHHHHHhhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEec
Q 014936          267 RKPKVVERMKKYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKL  345 (415)
Q Consensus       267 ~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l  345 (415)
                         +.......... ...+.+.....++......   .......+...++...+.+.+.++++.. ...|..++++|+.+
T Consensus       214 ---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~  286 (343)
T d1m6sa_         214 ---DFIERARKARKMLGGGMRQAGVLAAAGIIAL---TKMVDRLKEDHENARFLALKLKEIGYSV-NPEDVKTNMVILRT  286 (343)
T ss_dssp             ---HHHHHHHHHHHHHTCCCSSTHHHHHHHHHHH---HHSSTTHHHHHHHHHHHHHHHHHHTCBC-CGGGCCSSEEEEEC
T ss_pred             ---HHHhhhHhhCcccccccchhHHHHHhhhhhh---hhhHHHHHHHHHHHHHhhhHHHHhccCc-cCCCCCceEEEEEe
Confidence               44444433321 2222222222222211111   1112223334444455555555544444 33566778899888


Q ss_pred             CccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          346 NLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       346 ~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      +...    .+..++...| .++||.+.|..    ++++||+++  +++|+|+++++.|+++++++
T Consensus       287 ~~~~----~~a~~l~~~L-~~~Gi~v~~~~----~~~iRi~~~~~~t~edid~~v~~l~~v~~~~  342 (343)
T d1m6sa_         287 DNLK----VNAHGFIEAL-RNSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  342 (343)
T ss_dssp             TTSS----SCHHHHHHHH-HHHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCc----ccHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            6432    2456777766 56699998753    578999984  68999999999999999876

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=4.1e-23  Score=191.62  Aligned_cols=324  Identities=12%  Similarity=0.116  Sum_probs=209.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCC-----------cHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHH
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAG-----------LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMAL  119 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g-----------~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~  119 (415)
                      .++++.+.+++.+.+...    |+++.+           +.+.|+.+|+++      ++++++|++++|+|+++..++.+
T Consensus        11 ~~~p~~v~ea~~~~~~~~----~~np~~~~~~~~~~~~~~~~aR~~ia~l~------~~~~~~i~~~~~~T~~l~~~~~~   80 (376)
T d1eg5a_          11 TRVDDRVLEEMIVFYREK----YGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCATESINWILKT   80 (376)
T ss_dssp             CCCCHHHHHHHHHHHHTC----CCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHc----CCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEEECCHHHHHHhhhhc
Confidence            466789999999988743    222211           345688999998      57899999999999999998864


Q ss_pred             ----hcCCCCEEEEcCCCCcchHHH---HHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCH
Q 014936          120 ----LSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (415)
Q Consensus       120 ----l~~~gd~vi~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~  192 (415)
                          ...+|+.|++....|+.+...   ++..|++++.+|++.  ++.+|+++++++++++|+++++++++|+||...+.
T Consensus        81 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~~  158 (376)
T d1eg5a_          81 VAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPV  158 (376)
T ss_dssp             HHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCH
T ss_pred             ccccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCC--CCeECHHHHHHhcCCCceEEEEECCccccceeeee
Confidence                346788888888888765544   456699999999864  34699999999999999999999999999999887


Q ss_pred             HHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHH
Q 014936          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (415)
Q Consensus       193 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~  272 (415)
                      +++.++++.. ..++++++|.+++.    +..+..+..++.+   ++++|++|+++.+|..+.|+  .+...+.  |.+.
T Consensus       159 ~~i~~~~~~~-~~~~~~~vD~~q~~----g~~~~d~~~~~~D---~~~~s~~K~~gp~G~~~l~~--~~~~~~~--p~~~  226 (376)
T d1eg5a_         159 EDVTRIVKKK-NKETLVHVDAVQTI----GKIPFSLEKLEVD---YASFSAHKFHGPKGVGITYI--RKGVPIR--PLIH  226 (376)
T ss_dssp             HHHHHHHHHH-CTTCEEEEECTTTT----TTSCCCCTTTCCS---EEEEEGGGGTSCTTCEEEEE--CTTSCCC--CSBC
T ss_pred             hhhhhhhhhc-ccCceeEEEeeecc----ccccccccccCcc---ceecccceeecCCCceeEEe--ccCcccC--Cccc
Confidence            7777766533 44899999999987    3334444444444   88999999988888655554  3321110  0000


Q ss_pred             HHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC-CCCCceEEEEecCccccC
Q 014936          273 ERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH-KPEGSMAVMLKLNLSLLD  351 (415)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~l~~~~~~  351 (415)
                      ..-.......+..+......+....... .................+.+.|.......... ...........++.    
T Consensus       227 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----  301 (376)
T d1eg5a_         227 GGGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPN----  301 (376)
T ss_dssp             SSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTT----
T ss_pred             CCCCcccccCCcccchhhhhHHHHhhcc-ccchhhhhhhhhhhhhhhccccccccccccccccccccceeeeccCC----
Confidence            0000000112233334433333333221 12234445555566667777777653322110 11111223333432    


Q ss_pred             CCCCHHHHHHHHHhhcCeEEEcCCCCCC-------------------CCeEEEEee--CChhhHHHHHHHHHHHHH
Q 014936          352 DIIDDIDFCFKLAKEESVIILPGTAVGL-------------------KNWLRVTFA--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       352 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~-------------------~~~iRi~~~--~~~~~l~~~l~~l~~~~~  406 (415)
                        .+...+.. .|.++||.+++|..|..                   .++||+|++  ++++|++.+++.|++++.
T Consensus       302 --~~~~~~~~-~L~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~  374 (376)
T d1eg5a_         302 --IRGSTLQN-LLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS  374 (376)
T ss_dssp             --CCHHHHHH-HHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             --CCHHHHHH-HHhhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence              14555544 56788999988876532                   246999996  589999999999999875

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.91  E-value=1.1e-23  Score=192.47  Aligned_cols=328  Identities=10%  Similarity=0.049  Sum_probs=214.5

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHH
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~  114 (415)
                      .+.+||++.++     .+++|++++|+.++... ....|+......++|+.+|++++       .+..+++|+|||+++.
T Consensus         2 ~~~~~f~s~n~-----~g~~P~v~~A~~~a~~~-~~~~~~~~~~~~~l~~~la~~~g-------~~~~v~f~~sGt~An~   68 (345)
T d1v72a1           2 PPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIFE-------RDVEVFLVPTGTAANA   68 (345)
T ss_dssp             CCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHHT-------SCCEEEEESCHHHHHH
T ss_pred             CCCcCcCCCCC-----CCCCHHHHHHHHHHhcc-CccccCCCHHHHHHHHHHHHHHC-------CCcEEEECCchHHHHH
Confidence            46789998773     45689999999887543 33467666678899999999983       3457999999999999


Q ss_pred             HHHHHhcCCCCEEEEcCCCCcchHH---HHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC------ce-EEEecCCCC
Q 014936          115 VAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TV-ALVIINPGN  184 (415)
Q Consensus       115 ~~~~~l~~~gd~vi~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~-~v~i~~p~n  184 (415)
                      .++..++.+++.+++....+..+..   .....+..+..++.  ..+...+++.+++.+...      +. .++.+.+.|
T Consensus        69 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  146 (345)
T d1v72a1          69 LCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVD--GPAAKLDIVRLRERTREKVGDVHTTQPACVSITQAT  146 (345)
T ss_dssp             HHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECC--CGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC
T ss_pred             HHHHHHHhcCCccccccccceeeechhhHHHhcCcccccccc--cccccccHHHhhhhhcccccccccccceeeeeeccc
Confidence            9999999999988888877765432   33445555555443  334457899999887653      22 345667788


Q ss_pred             ccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCC
Q 014936          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (415)
Q Consensus       185 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  263 (415)
                      +.|...+.++++++.++|+++|+++++|+++.++........ ......... .....+.+|..+..   .+........
T Consensus       147 ~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~  222 (345)
T d1v72a1         147 EVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGV-DALSFGATKNGVLA---AEAIVLFNTS  222 (345)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTC-CEEEECCGGGTCSS---CEEEEESSGG
T ss_pred             cccccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccc-cccccCcccccccc---ccccccchhh
Confidence            899999999999999999999999999999976543321111 111111111 23333444542222   2333333211


Q ss_pred             CCCChHHHHHHHHhhccccCC--chhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEE
Q 014936          264 GMFRKPKVVERMKKYFDILGD--PATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAV  341 (415)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~  341 (415)
                            ...............  .......+....+..   ....+...+..++...+.+.+.+++++. +..|..++++
T Consensus       223 ------~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~p~~~niv  292 (345)
T d1v72a1         223 ------LATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD---DLWLRNARKANAAAQRLAQGLEGLGGVE-VLGGTEANIL  292 (345)
T ss_dssp             ------GHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHTTCTTEE-EESCCCSSEE
T ss_pred             ------hhhhccccccccccccchhhHHhhhhHHHHHH---hhhhhhccchhhHHHHHHHHHHhcCCcE-eccCCCccEE
Confidence                  111111111111222  222222333333333   4455566667777788888999998888 5478888899


Q ss_pred             EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                      +++++          .+....++ ++||.+.++.  ..++.+||+++  +|+|+++.+++.|+++
T Consensus       293 ~~~~~----------~~~~~~L~-~~gi~v~~~~--~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         293 FCRLD----------SAMIDALL-KAGFGFYHDR--WGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             EEEEC----------HHHHHHHH-HTTCBCBCSS--SSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             EEEcC----------HHHHHHHH-HcCCCccccC--CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            98774          23455554 5698875443  12579999995  6899999999999864

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=9.3e-23  Score=190.06  Aligned_cols=325  Identities=12%  Similarity=0.085  Sum_probs=216.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILL  129 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~vi~  129 (415)
                      .+.+++|++++....-.+....+  ..-+.++|+.+++++      +++.+ .|++++|+|+++++++..++.+|+++++
T Consensus        28 ~~~~~~Vl~am~~~~i~HRs~~f--~~i~~ea~~~l~~ll------g~~~~~~ii~~gsgT~a~~~~i~~l~~~~~~~~~   99 (388)
T d1h0ca_          28 SNLPPRIMAAGGLQMIGSMSKDM--YQIMDEIKEGIQYVF------QTRNPLTLVISGSGHCALEAALVNVLEPGDSFLV   99 (388)
T ss_dssp             CCCCHHHHHHHTCCCCCTTSHHH--HHHHHHHHHHHHHHH------TCCCSEEEEESSCHHHHHHHHHHHHCCSSCCEEE
T ss_pred             CCCCHHHHHHhCcCCCCCCCHHH--HHHHHHHHHHHHHHh------CCCCCcEEEEcCcHHHHHHHHHHHhhccCCceee
Confidence            45678888877432111110000  122567777777777      34433 6888999999999999999999999999


Q ss_pred             cCCCCcchHH--HHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcC
Q 014936          130 PRPGFPIYEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (415)
Q Consensus       130 ~~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~  206 (415)
                      ....+.+...  .+...+..+..+...  ....++.+.+++.+ +.+++++.+++.+|.||.+.|   +++|+++|+++|
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~p---i~~i~~~~~~~g  174 (388)
T d1h0ca_         100 GANGIWGQRAVDIGERIGARVHPMTKD--PGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQP---LDGFGELCHRYK  174 (388)
T ss_dssp             CBSSHHHHHHHHHHHHHC--CBCCBCC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHTTT
T ss_pred             ecccceeeeeccccccccccccccccC--CccccchHHHHHHhccCCcceEEEeeeeeccccccC---HHHHHHHhhccc
Confidence            9988876443  345556666555543  33457888876654 447889999999999999954   778888889999


Q ss_pred             cEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh--------
Q 014936          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------  278 (415)
Q Consensus       207 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------  278 (415)
                      +++++|.+++..    .....+..++.+   +++.|.+|.++.++ .+|+++.++        ...+.+...        
T Consensus       175 ~~~~vD~~qs~g----~~~~d~~~~~~D---~~~~s~~K~~~gp~-g~~~~~~~~--------~~~~~~~~~~~~~~~~~  238 (388)
T d1h0ca_         175 CLLLVDSVASLG----GTPLYMDRQGID---ILYSGSQKALNAPP-GTSLISFSD--------KAKKKMYSRKTKPFSFY  238 (388)
T ss_dssp             CEEEEECTTTTT----TSCCCTTTTTCS---EEEEESSSTTCCCT-TCEEEEECH--------HHHHHHTTCSSCCSCST
T ss_pred             ccceeccccccc----cccccccccccc---eecccccccccCCC-ceEEEeecH--------HHHHhhhhccccccccc
Confidence            999999999873    333344444443   77888899875443 256666543        222222110        


Q ss_pred             ----------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----Cc
Q 014936          279 ----------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GS  338 (415)
Q Consensus       279 ----------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g  338 (415)
                                      .....+++.....++..++....+..++...++..++.+++.+.++.+ ++... .+.    ..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~~~~-g~~~~-~~~~~~rs~  316 (388)
T d1h0ca_         239 LDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQAL-GLQLF-VKDPALRLP  316 (388)
T ss_dssp             TCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBS-SCSGGGBCT
T ss_pred             cccchhhhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHhhc-Ccccc-cCCHHHcCC
Confidence                            011234555555555555543333446777777788888888888876 43322 221    12


Q ss_pred             eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEE-ee--CChhhHHHHHHHHHHHHHHHHHH
Q 014936          339 MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT-FA--VDPYSLEECLDRIKSFYQRHAKQ  411 (415)
Q Consensus       339 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~-~~--~~~~~l~~~l~~l~~~~~~~~~~  411 (415)
                      ..+.+.+++.     .+..++...+++++||.+..|..+...+.|||| ++  .+.++++.+++.|+++++++.++
T Consensus       317 ~i~~~~~p~~-----~~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l~k~  387 (388)
T d1h0ca_         317 TVTTVAVPAG-----YDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKK  387 (388)
T ss_dssp             TEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHSCCC
T ss_pred             eEEEEECCCC-----CCHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHhccc
Confidence            2445556532     267888888888889999998776667899999 54  57899999999999999987653

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.89  E-value=4.4e-22  Score=180.52  Aligned_cols=319  Identities=14%  Similarity=0.106  Sum_probs=197.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEc
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~  130 (415)
                      .+++|++++|+.+....+ ...|++.....++|+.+|+++      +.++++|++|+|+|+++..++..+.++++.+++.
T Consensus        10 ~g~~P~v~eAl~~~~~~~-~~~y~~~~~~~~lr~~ia~~~------g~~~~~v~~tsggtean~~a~~~~~~~~~~~~~~   82 (340)
T d1svva_          10 VGMHPKILDLMARDNMTQ-HAGYGQDSHCAKAARLIGELL------ERPDADVHFISGGTQTNLIACSLALRPWEAVIAT   82 (340)
T ss_dssp             SCCCHHHHHHHHHHTTCC-CCSTTCSHHHHHHHHHHHHHH------TCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEE
T ss_pred             CCCCHHHHHHHHHHhhcC-CCCCCCCHHHHHHHHHHHHHh------CCCcceEEEcCCHHHHHHHHHHHHhhhccccccc
Confidence            456899999999876643 346777677789999999999      5678899999999999999999999999999999


Q ss_pred             CCCCcchHHHH--HhCCCeEEEeeccCCCCCCCChhHHHhhc------CCCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936          131 RPGFPIYELSA--AFRHIEVRHFDLLPDKGWEVDLDDIESLA------DQNTVALVIINPGNPCGNVYSYQHLQKLAETA  202 (415)
Q Consensus       131 ~p~y~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~  202 (415)
                      .+.|..+....  ...+........  ... ..+.+......      ...+..++++.+.|+.|.+.+.+++..+...|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (340)
T d1svva_          83 QLGHISTHETGAIEATGHKVVTAPC--PDG-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASC  159 (340)
T ss_dssp             TTSHHHHSSTTHHHHTTCCEEEECC--TTS-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHH
T ss_pred             cccceeeeecccccccceeeeeccc--ccc-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhccc
Confidence            98887654332  222333222222  111 12333222221      11234455555556677888889999999999


Q ss_pred             hhcCcEEEEccccCCcccCCCCc-ccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc
Q 014936          203 NKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI  281 (415)
Q Consensus       203 ~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (415)
                      ++++.++++|+++.......... ........ ...+...+..|..  .+.+.++.........    ..... ......
T Consensus       160 ~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~-~~~~~~  231 (340)
T d1svva_         160 KEHGLYLFLDGARLASALSSPVNDLTLADIAR-LTDMFYIGATKAG--GMFGEALIILNDALKP----NARHL-IKQRGA  231 (340)
T ss_dssp             HHHTCEEEEECTTHHHHHTSTTCCCCHHHHHH-HCSEEEEECTTTT--CSSCEEEEECSGGGCT----THHHH-HHHTTC
T ss_pred             ccccceeeeeccceeeeecccccccccccccc-cceeeecCCcccc--ccccccccccchhhhh----hhhhh-cccccC
Confidence            99999999999997655332221 11111111 1224444555553  3333455544321111    01111 111111


Q ss_pred             cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHH
Q 014936          282 LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCF  361 (415)
Q Consensus       282 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~  361 (415)
                      ..........++...++.   .......++..+++.++...++.. ++. +..|..++++++.++.          +...
T Consensus       232 ~~~~~~~~~aa~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~-g~~-~~~p~~~~~v~~~~~~----------~~~~  296 (340)
T d1svva_         232 LMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGLEAC-GIR-LAWPSASNQLFPILEN----------TMIA  296 (340)
T ss_dssp             CCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCCSSSEECBEEEH----------HHHH
T ss_pred             ccchhhHHHHHHHHHhhh---hHHHHHHHHHHHHHhhhHHHHhcC-CCe-eecCCCceEEEEeCCH----------HHHH
Confidence            222233344444445544   345556677788888888999887 787 4478888888887742          3445


Q ss_pred             HHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHH
Q 014936          362 KLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKS  403 (415)
Q Consensus       362 ~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~  403 (415)
                      .++++..+...+... ..++++|++++  ++++++|++++.|++
T Consensus       297 ~l~~~~~~~~~~~~~-~~~~~vR~s~~~~~t~edid~~l~~l~~  339 (340)
T d1svva_         297 ELNNDFDMYTVEPLK-DGTCIMRLCTSWATEEKECHRFVEVLKR  339 (340)
T ss_dssp             HHTTTEECEEEEEET-TTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             HHHHhhhhhcccccC-CCCcEEEEECCCCCCHHHHHHHHHHHhc
Confidence            554442222222211 22588999884  789999999999876

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.89  E-value=2.2e-20  Score=169.72  Aligned_cols=281  Identities=13%  Similarity=0.155  Sum_probs=201.7

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~  153 (415)
                      ....|++.+|+.-        ..+..+++++|++|+..++.+++++||+|+++...|.+....    +...|+++..++.
T Consensus        64 T~~~LE~~la~LE--------gg~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~  135 (397)
T d1y4ia1          64 TTDALEKKLAVLE--------RGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA  135 (397)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCccceeehHHHHHHHHHHhhccCCCCeeeeecccccccchhhhcccCCCceEeeccCC
Confidence            4566777777765        456788999999999999999999999999999999876554    4577999988753


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                             -|++.++++++++|++|++-.|.||+..+   .++++|+++|+++|+++++|..++...    ...|+ .++.
T Consensus       136 -------~d~~~~~~~i~~~Tklv~~Esp~NP~l~v---~Di~~i~~iA~~~gi~~vvDnT~atP~----~~~Pl-~~Ga  200 (397)
T d1y4ia1         136 -------GKPEEIRAAMRPETKVVYIETPANPTLSL---VDIETVAGIAHQQGALLVVDNTFMSPY----CQQPL-QLGA  200 (397)
T ss_dssp             -------TSHHHHHHHCCTTEEEEEEESSCTTTCCC---CCHHHHHHHHHHTTCEEEEECTTTCTT----TCCGG-GGTC
T ss_pred             -------CCHHHHHHhcCCCCcEEEecCCcccceee---cccHHHHHHhhcCCceEEecCcccCcc----cCcch-hcCC
Confidence                   37899999999999999999999999888   568888889999999999999987522    12222 2344


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHH--hhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK--KYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLN  310 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  310 (415)
                      +   |++.|++|.++..+--+|.+++.+.       +.+.+.+  .... .....+|.....+..-|+.     +.-+.+
T Consensus       201 D---ivihS~TKyi~Ghsdvl~G~v~~~~-------~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~T-----L~lRm~  265 (397)
T d1y4ia1         201 D---IVVHSVTKYINGHGDVIGGIIVGKQ-------EFIDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRME  265 (397)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEECH-------HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred             C---EEEEehhhhcCCCcceeeeccCCCH-------HHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCc-----HHHHHH
Confidence            4   8999999998766655555555431       3444332  3232 3567788888888888987     788889


Q ss_pred             HHHHHHHHHHHHhhcCCCCcCCCCC-----------------CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeE---
Q 014936          311 LLKQSVDICYNKIKEIPCISCPHKP-----------------EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVI---  370 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~~~~~~~~~~p-----------------~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~---  370 (415)
                      +..++...+.+.|+..|.+..+.+|                 .+| .+.+.+..        +.+...+++..-.+.   
T Consensus       266 ~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg-~~sf~~~~--------~~~~~~~f~~~L~l~~~a  336 (397)
T d1y4ia1         266 RHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGG-IISFEIAG--------GLEAGRRMINSVELCLLA  336 (397)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCS-EEEEEETT--------HHHHHHHHHHTCSSSEEC
T ss_pred             HHHHHHHHHHHHHHhCCCcCeEeCCCCCCCccccccccccCCCCe-EEEEEecC--------CHHHHHHHHHcCCcccee
Confidence            9999999999999988776555555                 234 34445542        333344554443433   


Q ss_pred             EEcCCCCC-----------------------CCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          371 ILPGTAVG-----------------------LKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       371 v~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++-|....                       .++.||+|++.  |+.+.+++.|.+++++
T Consensus       337 ~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlsvGl--Ed~~DLi~Dl~~AL~~  394 (397)
T d1y4ia1         337 VSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGL--EDPEDIINDLEHAIRK  394 (397)
T ss_dssp             SCCSCSSCEEECTTTTTTSSSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred             eccCcccceeeCccccccccCCHHHHHHcCCCcCEEEEEecc--CCHHHHHHHHHHHHHH
Confidence            22222110                       14689999986  4556667777777654

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.88  E-value=1.2e-20  Score=171.38  Aligned_cols=219  Identities=19%  Similarity=0.218  Sum_probs=172.5

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~  153 (415)
                      ....|++.||+.-        ..+..+++++|.+|+..++.+++++||+|+++...|++....++    ..|+++..++.
T Consensus        60 T~~~LE~~la~LE--------g~~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~  131 (392)
T d1gc0a_          60 TLNLLEARMASLE--------GGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM  131 (392)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCcceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCc
Confidence            5678888888876        46788899999999999999999999999999999998777654    45888888753


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                             -|++.++++++++|++|++-+|.||+..+   .++++|+++|+++|+++++|..++...+    ..|+ .++.
T Consensus       132 -------~d~~~~~~ai~~~t~lv~~Esp~NP~l~v---~Di~~i~~ia~~~g~~~vvDnT~atP~~----~~Pl-~~Ga  196 (392)
T d1gc0a_         132 -------ADLQALEAAMTPATRVIYFESPANPNMHM---ADIAGVAKIARKHGATVVVDNTYCTPYL----QRPL-ELGA  196 (392)
T ss_dssp             -------TCHHHHHHHCCTTEEEEEEESSCTTTCCC---CCHHHHHHHHGGGTCEEEEECTTTHHHH----CCGG-GGTC
T ss_pred             -------cCHHHHHHhCCCCCeEEEecccccceeee---cchHHHHHHHHhcCCEEEEecCccCccc----cChH-HhCC
Confidence                   37899999999999999999999999998   5688889999999999999999875332    1122 3444


Q ss_pred             CCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHH--hhcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHH
Q 014936          234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMK--KYFD-ILGDPATFIQAAVPSILQQPDEVFFKKTL  309 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  309 (415)
                      +   |++.|.+|.++..| .-.|.+++++        +.+.+++  .... .....+|.....+..-|+.     +.-+.
T Consensus       197 D---ivihS~TKyi~Ghsd~~~G~v~~~~--------~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~T-----L~lRm  260 (392)
T d1gc0a_         197 D---LVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LNLRM  260 (392)
T ss_dssp             S---EEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             C---EEEEecceeecCCcccccccccchh--------HHHHHHHHHHHHHccCCcCChhhHHHHHhcccc-----HHHHH
Confidence            4   89999999986655 4455555543        3444433  2232 3567888899999999987     78888


Q ss_pred             HHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          310 NLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       310 ~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ++..++...+.+.|+..|.+..+.+|
T Consensus       261 ~~~~~nA~~lA~~L~~hp~V~~V~yP  286 (392)
T d1gc0a_         261 DRHCANAQVLAEFLARQPQVELIHYP  286 (392)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCccEEeec
Confidence            99999999999999988776644444

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=9e-21  Score=172.04  Aligned_cols=219  Identities=14%  Similarity=0.115  Sum_probs=168.2

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~  153 (415)
                      ....|++.||+.-        ..+..+++++|.+|+. ++..++++||+|++..+.|.+....++    ..|+++..++.
T Consensus        50 t~~~le~~la~LE--------~~~~a~~fsSGMaAis-all~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~  120 (380)
T d1ibja_          50 TRDALESLLAKLD--------KADRAFCFTSGMAALS-AVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT  120 (380)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHH-HHHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT
T ss_pred             HHHHHHHHHHHHc--------CCceEEehhhHHHHHH-HHHHhhCCCCEEEEEecccccccchhhhhhccccccccccCc
Confidence            4567788887775        4567888999999997 456788999999999999998777664    35777776643


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                             .+.+.+++++++++++|++-.|.||+..+   .++++|+++|+++|+++|+|+.++...    ...++ .++.
T Consensus       121 -------~~~~~~~~ai~~~t~li~~EtpsNP~l~v---~Di~~i~~iA~~~g~~~vVDnT~atP~----~~~Pl-~~Ga  185 (380)
T d1ibja_         121 -------TKLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKISEMAHAQGALVLVDNSIMSPV----LSRPL-ELGA  185 (380)
T ss_dssp             -------TSHHHHHHHCCSSEEEEEECSSCTTTCCC---CCHHHHHHHHHTTTCEEEEECTTTCTT----TCCGG-GTTC
T ss_pred             -------chHHHHHHHhccCccEEEecccccccccc---ccHHHHHHHHHHcCCeEEeeccccccc----ccccc-ccCC
Confidence                   37899999999999999999999999999   557888888889999999999987522    12222 2344


Q ss_pred             CCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936          234 TVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNL  311 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  311 (415)
                      +   |++.|++|.++..|--+ |.++.++       ..+.+.++... ......++.....+..-|+.     +..+.++
T Consensus       186 D---iVvhS~TKyi~GhsDv~~G~v~~~~-------~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T-----l~lRm~~  250 (380)
T d1ibja_         186 D---IVMHSATKFIAGHSDVMAGVLAVKG-------EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT-----MALRIEK  250 (380)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEECS-------HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT-----HHHHHHH
T ss_pred             C---EEEecccceeccccCccccccccch-------hhHHHHHHhhccccCCcCCHHHHHHHHhcchh-----hhhhHHH
Confidence            3   89999999987766544 4445443       14556665553 34456788888999888987     7888899


Q ss_pred             HHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          312 LKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       312 ~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ..++...+.+.|++.|.+..+.+|
T Consensus       251 ~~~nA~~lA~~L~~hp~V~~V~yP  274 (380)
T d1ibja_         251 QQENARKIAMYLSSHPRVKKVYYA  274 (380)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEECT
T ss_pred             HHHHHHHHHHHHHhCCCeeEEecc
Confidence            999999999999988776655554

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=3.3e-20  Score=168.28  Aligned_cols=287  Identities=15%  Similarity=0.166  Sum_probs=202.4

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCe
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIE  147 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~  147 (415)
                      ++++ +....|++.||+.-        ..+..+++++|.+|+..++.+++++||.|++....|.+....+    ...|..
T Consensus        46 R~~n-Pt~~~le~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~  116 (384)
T d1cs1a_          46 RRGN-PTRDVVQRALAELE--------GGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYR  116 (384)
T ss_dssp             TTCC-HHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCE
T ss_pred             CCCC-HHHHHHHHHHHHHh--------CCCceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhcccccc
Confidence            3444 35577888888876        4578899999999999999999999999999999998765544    445777


Q ss_pred             EEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc
Q 014936          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP  227 (415)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~  227 (415)
                      +..++.       .|.+.++..+++++++|++-.|.||+..+   -++++|+++|+++|+++|+|..++...    ...+
T Consensus       117 ~~~~d~-------~d~~~~~~~~~~~t~~v~~EspsNP~l~v---~Di~~i~~ia~~~g~~~vVDNT~atP~----~~~P  182 (384)
T d1cs1a_         117 VLFVDQ-------GDEQALRAALAEKPKLVLVESPSNPLLRV---VDIAKICHLAREVGAVSVVDNTFLSPA----LQNP  182 (384)
T ss_dssp             EEEECT-------TCHHHHHHHHHTCCSEEEEECSCTTTCCC---CCHHHHHHHHHHTTCEEEEECTTTCTT----TCCG
T ss_pred             cccccC-------CCHHHHHhhccccccEEEEecccccccee---ccHHHHhhhhhhcCcEEEEeccccCcc----cccc
Confidence            766542       47899999999999999999999999988   457788888889999999999986422    1122


Q ss_pred             ccccCCCCCeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHH
Q 014936          228 MGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFF  305 (415)
Q Consensus       228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~  305 (415)
                      + .++.+   |++.|++|.++..|--+ |.+++++       +.+.+.+... .......++.....+..-|+.     +
T Consensus       183 l-~~GaD---iVvhS~TKyi~Ghsdv~~G~vv~~~-------~~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~T-----L  246 (384)
T d1cs1a_         183 L-ALGAD---LVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----L  246 (384)
T ss_dssp             G-GGTCS---EEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----H
T ss_pred             c-ccCCC---EEEEccccccccCCCcccccccCCc-------hhhhhhhhhhhhhhhhccccccHHHHhhccch-----h
Confidence            2 23444   89999999987665444 4455533       2455555554 334566788888888888887     7


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCe
Q 014936          306 KKTLNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESV  369 (415)
Q Consensus       306 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi  369 (415)
                      .-+.++..++...+.+.|+..|.+..+.+|.                .|..+.+.+..        +.+.+.+++..-.+
T Consensus       247 ~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~--------~~~~a~~f~~~L~l  318 (384)
T d1cs1a_         247 VPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--------DEQTLRRFLGGLSL  318 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--------CHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHHHHHHhcccCCceeeeeeccccchhHHHHHHhhcCCCcceeEEeecc--------hHHHHHHHHHhCCc
Confidence            8888999999999999999887765555553                23344455542        22333444444333


Q ss_pred             E---EEcCCCCC-----------------------CCCeEEEEeeCChhhHHHHHHHHHHHHHH
Q 014936          370 I---ILPGTAVG-----------------------LKNWLRVTFAVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       370 ~---v~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~~~  407 (415)
                      .   ++-|....                       .++.||+|++.  |+.+.+++.|+++++.
T Consensus       319 ~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvGl--Ed~eDLi~Dl~~AL~a  380 (384)
T d1cs1a_         319 FTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRA  380 (384)
T ss_dssp             SEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred             ceeccccCCccceeccccccccccCCHHHHHhcCCCcCeEEEEecc--CCHHHHHHHHHHHHHH
Confidence            2   22222211                       04679999986  4566666777777664

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=4.5e-20  Score=173.31  Aligned_cols=360  Identities=13%  Similarity=-0.009  Sum_probs=238.4

Q ss_pred             cCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC---cEEEeCCh
Q 014936           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVTSGC  109 (415)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~---~i~i~~g~  109 (415)
                      .+++-.||.+....     ..++.+.+.+.+.+..+.. .+...+...++++.+.+++.+.+|.+...+   .-.+|+|+
T Consensus        51 dg~~~~n~asf~~t-----~~~~~~~~l~~~~~~~N~~-~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~Gg  124 (450)
T d1pmma_          51 DGNARQNLATFCQT-----WDDENVHKLMDLSINKNWI-DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGS  124 (450)
T ss_dssp             SCCGGGBCSCCSCC-----CCCHHHHHHHHHTTTCBTT-CTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSH
T ss_pred             CCCccccccccccC-----CCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCch
Confidence            36666777766532     3457888888888776432 444344457899999999999888654322   35899999


Q ss_pred             HHHHHHHHHHhcC-----------C-CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEE
Q 014936          110 TQAIDVAMALLSR-----------P-GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (415)
Q Consensus       110 ~~al~~~~~~l~~-----------~-gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v  177 (415)
                      |+|+.+++.+...           . ...++++...|.++..+++..|+++..++.++ .++.+|+++|++++++++.+|
T Consensus       125 SeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~-~~~~~d~~~L~~~i~~~t~~V  203 (450)
T d1pmma_         125 SEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGV  203 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecC-CCCcCcHHHHHHHhhhCceEE
Confidence            9999998877531           1 23577888899999999999999999999875 357899999999999999999


Q ss_pred             EecCCCCccccCCCHHHHHHHHH---HHhhcCcEEEEccccCCccc--CCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          178 VIINPGNPCGNVYSYQHLQKLAE---TANKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       178 ~i~~p~nptG~~~~~~~l~~i~~---~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      +.+.+++.||.+=+.+.+.+|++   .|+++|+++++|.+++++..  ..........+.  .-.-+..|.+|. +....
T Consensus       204 v~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~~--~aDSi~~s~HK~-~~~p~  280 (450)
T d1pmma_         204 VPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLP--RVKSISASGHKF-GLAPL  280 (450)
T ss_dssp             ECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTST--TEEEEEEETTTT-TCCCS
T ss_pred             EeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhccc--ceeEeecChhhc-cCCCC
Confidence            99999999999977776655544   46789999999999987542  211111111111  112556689997 44445


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHh--------hcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKK--------YFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNK  322 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  322 (415)
                      .+||++.+++....      ..+..        ....+  ++-+......+...+.....+.+++..++..++++++.+.
T Consensus       281 g~g~l~~r~~~~~~------~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l~~~  354 (450)
T d1pmma_         281 GCGWVIWRDEEALP------QELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADE  354 (450)
T ss_dssp             SCEEEEESSGGGSC------GGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeeEEEecChhhhh------hhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            59999997644221      11100        00011  1111112222222333333577899999999999999999


Q ss_pred             hhcCCCCcCCC--CCCCc-eEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC---CCCeEEEEe--eCChhhH
Q 014936          323 IKEIPCISCPH--KPEGS-MAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG---LKNWLRVTF--AVDPYSL  394 (415)
Q Consensus       323 l~~~~~~~~~~--~p~~g-~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---~~~~iRi~~--~~~~~~l  394 (415)
                      |+++++++++.  .|..+ ..+.+++......+. +..++... |+++|..+.......   ....+|+.+  ..+++++
T Consensus       355 L~~~~~~el~~~~~p~~~l~~V~Fr~~~~~~~~~-~~~~l~~~-L~~~Gw~v~~~~~p~~~~~~~~lRvvv~~~~t~e~~  432 (450)
T d1pmma_         355 IAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGY-TLYDLSER-LRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFA  432 (450)
T ss_dssp             HHTTSCEEEEEECCTTTBSSEEEEEECTTCCCSS-CHHHHHHH-HHTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHH
T ss_pred             HHhCCCeEEEeCCCCCCceEEEEEecCCcccCCC-CHHHHHHH-HHHcCCeeeccCcCCCcCCcEEEEEEccCCCCHHHH
Confidence            99998877432  12222 234555543322222 34555544 567786653221111   134799999  4688999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 014936          395 EECLDRIKSFYQRHAK  410 (415)
Q Consensus       395 ~~~l~~l~~~~~~~~~  410 (415)
                      +.+++.|+++++.+.+
T Consensus       433 d~lv~dl~~~v~~l~~  448 (450)
T d1pmma_         433 ELLLEDYKASLKYLSD  448 (450)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999988765

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.87  E-value=7.5e-20  Score=169.40  Aligned_cols=310  Identities=12%  Similarity=0.072  Sum_probs=206.5

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCC
Q 014936           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP  132 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p  132 (415)
                      .++-++++.+.++.+.+ ..++  ...++++.+|+++        ..++.+++++||+|+.+++.++ .++||+|+++..
T Consensus        11 ~~~~~~~~~~~~~~~~~-~~G~--~v~~~E~~la~~~--------g~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~   79 (376)
T d1mdoa_          11 GAEELAAVKTVLDSGWI-TTGP--KNQELEAAFCRLT--------GNQYAVAVSSATAGMHIALMALGIGEGDEVITPSM   79 (376)
T ss_dssp             CHHHHHHHHHHHHHTCC-SSSH--HHHHHHHHHHHHH--------CCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred             CHHHHHHHHHHHhcCCC-cCCH--HHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHhCCCCCCEEEEecc
Confidence            35666888888887654 2343  4689999999999        4568899999999999999998 689999999999


Q ss_pred             CCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEc
Q 014936          133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (415)
Q Consensus       133 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D  212 (415)
                      +|.+........|.+++.+++++ +.+.+|+++|+++++++|++|+++|   ..|..   .++.+|.++|+++|+++|+|
T Consensus        80 ~~~~~~~ai~~~g~~pv~~d~~~-~~~~~d~~~l~~~i~~~tkaIi~~h---~~G~~---~~~~~i~~i~~~~~i~vIeD  152 (376)
T d1mdoa_          80 TWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPVH---YAGAP---ADLDAIYALGERYGIPVIED  152 (376)
T ss_dssp             SCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCBC---GGGCC---CCHHHHHHHHHHHTCCBCEE
T ss_pred             cccccccchhccccceeeecccc-cccCCCHHHHHHhcCCCCeEEEEeC---CCCCc---cchhHHHHHHHhcCceEEec
Confidence            99999999999999999999876 4567999999999999999998876   56776   35778888888999999999


Q ss_pred             cccCCccc-CCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc----------
Q 014936          213 EVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI----------  281 (415)
Q Consensus       213 e~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~----------  281 (415)
                      ++++.+.. .+.   .....+   ..++-+..+|.+..++  .|.+++++       .++.+.++.....          
T Consensus       153 ~a~a~g~~~~~~---~~g~~g---~~~~Sf~~~K~l~~g~--GG~i~t~~-------~~l~~~~~~~~~~g~~~~~~~~~  217 (376)
T d1mdoa_         153 AAHATGTSYKGR---HIGARG---TAIFSFHAIKNITCAE--GGIVVTDN-------PQFADKLRSLKFHGLGVDAWDRQ  217 (376)
T ss_dssp             CTTCTTCEETTE---ETTSSS---EEEEECCTTSSSCSSS--CEEEEESC-------HHHHHHHHHHTBTTEECC-----
T ss_pred             cchhccCeeCCe---eccccc---CccccCCCcCCCCCCC--CCEEEEec-------hhHHHHHHhhcccCCcccccccc
Confidence            99998552 211   111222   1233333458754433  57777655       3466655544221          


Q ss_pred             ---------------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCC----ce-EE
Q 014936          282 ---------------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEG----SM-AV  341 (415)
Q Consensus       282 ---------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~----g~-~~  341 (415)
                                     +...+....+....-|.     .+++..++.+++++.+.+.|++++..... .+..    .+ .+
T Consensus       218 ~~~~~~~~~~~~~g~n~~~~~~~Aai~~~qL~-----~~~~~~~~r~~~~~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~  291 (376)
T d1mdoa_         218 SGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-----KLDALNARRAAIAAQYHQAMADLPFQPLS-LPSWEHIHAWHLF  291 (376)
T ss_dssp             ------CCEESSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHTSSCEECC-CCSSCEECCCSCE
T ss_pred             cccccccccchhcccccccchhhhhhhhhhhh-----hhhHHHHHHhhhhhhhhhhcccccccccc-ccccccccccccc
Confidence                           11222233333333333     36667777788888888999887554422 2211    11 12


Q ss_pred             EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC-----------CC----------CCeEEEEe--eCChhhHHHHH
Q 014936          342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV-----------GL----------KNWLRVTF--AVDPYSLEECL  398 (415)
Q Consensus       342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-----------~~----------~~~iRi~~--~~~~~~l~~~l  398 (415)
                      .+.++.... + .+..++...| +++||.+.+....           ..          ...|.+.+  ..++++++..+
T Consensus       292 ~~~~~~~~~-~-~~Rd~l~~~L-~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~  368 (376)
T d1mdoa_         292 IIRVDEARC-G-ITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVI  368 (376)
T ss_dssp             EEECCHHHH-S-SCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHH
T ss_pred             ccccccccc-h-hhHHHHHHHH-HHCCCCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHH
Confidence            222222111 0 1223455554 7789987643211           00          34466655  35889999999


Q ss_pred             HHHHHHH
Q 014936          399 DRIKSFY  405 (415)
Q Consensus       399 ~~l~~~~  405 (415)
                      +.|++++
T Consensus       369 ~~i~~i~  375 (376)
T d1mdoa_         369 TALHQIA  375 (376)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998865

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.86  E-value=2.2e-19  Score=166.15  Aligned_cols=313  Identities=12%  Similarity=0.109  Sum_probs=210.8

Q ss_pred             cHHHHHHHHHHHhcCCC-CCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcC
Q 014936           54 THVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR  131 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~  131 (415)
                      ..+-.+++.+.++.+.+ ...++  -..++++.+|+|+        ...+.+.+++||+|+.++++++ .++||+|+++.
T Consensus        12 ~~~~~~~~~~~l~~g~~~~~~g~--~v~~fE~~~a~~~--------g~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p~   81 (384)
T d1b9ha_          12 DDAERNGLVRALEQGQWWRMGGD--EVNSFEREFAAHH--------GAAHALAVTNGTHALELALQVMGVGPGTEVIVPA   81 (384)
T ss_dssp             CHHHHHHHHHHHHTSCCBTTTCS--HHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred             CHHHHHHHHHHHHcCCeeecCCH--HHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHcCCCCCCEEEEec
Confidence            45667788888887653 22333  4689999999998        4568899999999999999998 58999999999


Q ss_pred             CCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936          132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA  211 (415)
Q Consensus       132 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  211 (415)
                      .+|......+...|.+++.+++++ ..+.+|++.+++.+.+++++|++++.   .|..   .++.+|.++|+++++++|+
T Consensus        82 ~t~~a~~~ai~~~g~~p~~~d~~~-~~~~~d~~~~~~~i~~~tk~i~~~~~---~g~~---~d~~~i~~~~~~~~i~lie  154 (384)
T d1b9ha_          82 FTFISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIMPVHM---AGLM---ADMDALAKISADTGVPLLQ  154 (384)
T ss_dssp             SSCTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCBCG---GGCC---CCHHHHHHHHHHHTCCBCE
T ss_pred             cccccccccccccccccccccccc-cccccchhhhcccccccccccccccc---cccc---cccccchhhhhhhhhhhhh
Confidence            999999999999999999998865 45678999999999999999876654   4555   5678888999999999999


Q ss_pred             ccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc---------
Q 014936          212 DEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI---------  281 (415)
Q Consensus       212 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~---------  281 (415)
                      |.+++.+. +.|..   +..++.  -.++-.+.+|.+..  ...|.++++++.       +.+.++.....         
T Consensus       155 D~a~a~ga~~~g~~---~g~~g~--~~~~Sf~~~K~i~~--g~GG~i~t~~~~-------~~~~~~~~~~~g~~~~~~~~  220 (384)
T d1b9ha_         155 DAAHAHGARWQGKR---VGELDS--IATFSFQNGKLMTA--GEGGAVVFPDGE-------TEKYETAFLRHSCGRPRDDR  220 (384)
T ss_dssp             ECTTCTTCEETTEE---GGGSSS--CEEEECCTTSSSCS--SSCEEEEECTTC-------HHHHHHHHHHTBTTCCTTCS
T ss_pred             hhceecccccCCEe---cCcccc--cceecccccccccc--cccchhhhhhHH-------HHHHHHHHHhcCCCCccccc
Confidence            99998866 33332   223332  12444445787543  335778876643       55544433211         


Q ss_pred             ---------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----C-ceEEEEecCc
Q 014936          282 ---------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----G-SMAVMLKLNL  347 (415)
Q Consensus       282 ---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~-g~~~~~~l~~  347 (415)
                               +...+.+..+.+...|+.     +++..++.+++.+++.+.|+.++++.....+.    . .++..+.++.
T Consensus       221 ~~~~~~~G~n~rms~l~Aaig~~qL~~-----ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  295 (384)
T d1b9ha_         221 RYFHKIAGSNMRLNEFSASVLRAQLAR-----LDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPG  295 (384)
T ss_dssp             SCCCCSCCCBCBCBHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTT
T ss_pred             cccccccccccccccchhhhhhhhhhh-----cccchhhhhhhhhhhhhhhhcccccccccccccccccccccccceecc
Confidence                     122344444444444543     66677777888888888898876654221111    1 1233333432


Q ss_pred             cccCCCCCH-HHHHHHHHhhcCeEEEcCCCC----------CC-------------------CCeEEEEee--CC-hhhH
Q 014936          348 SLLDDIIDD-IDFCFKLAKEESVIILPGTAV----------GL-------------------KNWLRVTFA--VD-PYSL  394 (415)
Q Consensus       348 ~~~~~~~~~-~~~~~~ll~~~gi~v~~g~~~----------~~-------------------~~~iRi~~~--~~-~~~l  394 (415)
                      ..    ... .+++..| +++||.+.+.-..          +.                   +..+.+-+.  .+ ++|+
T Consensus       296 ~~----~~~Rd~l~~~L-~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei  370 (384)
T d1b9ha_         296 LT----EERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPEL  370 (384)
T ss_dssp             CC----HHHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHH
T ss_pred             cc----cccHHHHHHHH-HHCCCCeeeeCcchhcCHHHHhcCCCcccccccccCCHHHHHHHhCEEEccCCCCCCCHHHH
Confidence            10    012 2355554 7789988754210          00                   134666663  45 5799


Q ss_pred             HHHHHHHHHHHHH
Q 014936          395 EECLDRIKSFYQR  407 (415)
Q Consensus       395 ~~~l~~l~~~~~~  407 (415)
                      +..++.|++++.+
T Consensus       371 ~~I~~~i~~~l~~  383 (384)
T d1b9ha_         371 HATAEIIADAVAR  383 (384)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998764

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.86  E-value=1.2e-20  Score=176.57  Aligned_cols=329  Identities=12%  Similarity=0.033  Sum_probs=210.3

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~-------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~  106 (415)
                      .++++.|..+.-     .+.++.+.+++.+.+.......-.       ...-..++|+.+|+++      ++++++|++|
T Consensus        25 ~~~~iYLd~as~-----g~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~ll------ga~~~ei~~~   93 (404)
T d1qz9a_          25 PEGVIYLDGNSL-----GARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVT   93 (404)
T ss_dssp             CTTCEECCTTTS-----CCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEEC
T ss_pred             CCCCEEcCCccc-----ccCCHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHh------CCCCCcEEEe
Confidence            456788888762     455788899998887642211100       0122346888888888      5789999999


Q ss_pred             CChHHHHHHHHHHh------cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEec
Q 014936          107 SGCTQAIDVAMALL------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII  180 (415)
Q Consensus       107 ~g~~~al~~~~~~l------~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~  180 (415)
                      +++|++++.++...      ..+|+.|++.+..|++........+.++..++.+.  ....+++.++++++++|++|.++
T Consensus        94 ~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~T~lV~i~  171 (404)
T d1qz9a_          94 DTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTL--RLVDSPEELPQAIDQDTAVVMLT  171 (404)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE--EEESSGGGHHHHCSTTEEEEEEE
T ss_pred             cCchHHHHHHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceec--cccccchhHHHhcCCCceEEEEe
Confidence            99999998876532      36788888888777765444433333333332221  12357889999999999999999


Q ss_pred             CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEee
Q 014936          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (415)
Q Consensus       181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  260 (415)
                      +.+|.||.++|   +++|+++|+++|+.+++|.+++..    .....+...+.+   ++..|.+|.+..+..-.|+++.+
T Consensus       172 ~v~~~tG~~~p---v~~i~~~~~~~~~~~~vD~~q~~g----~~~~~~~~~~~d---~~~~s~~K~~~~~~g~~g~~~~~  241 (404)
T d1qz9a_         172 HVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAG----AVPVDLHQAGAD---YAIGCTYKYLNGGPGSQAFVWVS  241 (404)
T ss_dssp             SBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT----TSCCCHHHHTCS---EEEECSSSTTCCCTTCCCEEEEC
T ss_pred             cccccccceec---HHHHhccccccccceeEEeecccc----ccccccccccce---EEEEechhhcccCCceEEEEEec
Confidence            99999999966   777888888999999999999983    333444455544   77778899864443335666665


Q ss_pred             CCCCCCChHHHHHHHHh------------------------hccccCCchhHHHH---HHHHhhCCCcHHHHHHHHHHHH
Q 014936          261 DPCGMFRKPKVVERMKK------------------------YFDILGDPATFIQA---AVPSILQQPDEVFFKKTLNLLK  313 (415)
Q Consensus       261 ~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~---a~~~~l~~~~~~~~~~~~~~~~  313 (415)
                      +..        .+.+..                        ......+.+.....   +....+........++....+.
T Consensus       242 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  313 (404)
T d1qz9a_         242 PQL--------CDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALT  313 (404)
T ss_dssp             TTT--------TTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             hhh--------hhhCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhH
Confidence            421        111100                        00011223333333   3333444433445555555555


Q ss_pred             HHHHHHHHHhhcCCCCcCCCCCCC----ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee-
Q 014936          314 QSVDICYNKIKEIPCISCPHKPEG----SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA-  388 (415)
Q Consensus       314 ~~~~~l~~~l~~~~~~~~~~~p~~----g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~-  388 (415)
                      .....+.+.+...+++.++ .|..    +.++.+.++        +..++...| .++||.+..    ..++.||||++ 
T Consensus       314 ~~~~~l~~~~~~~~~~~i~-~p~~~~~r~~~vsf~~~--------~~~~v~~~L-~~~gi~~~~----r~~~~lRiS~~h  379 (404)
T d1qz9a_         314 DLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDY----REPRIMRFGFTP  379 (404)
T ss_dssp             HHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEE----ETTTEEEEECCT
T ss_pred             HHHHHHHHhhccCCCEEEE-CCCCccceeeEEEEecC--------CHHHHHHHH-HHCCCEEee----cCCCeEEEECCC
Confidence            5555555666666677743 3322    334555554        356666665 677997531    12478999984 


Q ss_pred             --CChhhHHHHHHHHHHHHHH
Q 014936          389 --VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       389 --~~~~~l~~~l~~l~~~~~~  407 (415)
                        ++++|++.+++.|++++++
T Consensus       380 ~ynt~~did~~~~~L~~vl~~  400 (404)
T d1qz9a_         380 LYTTFTEVWDAVQILGEILDR  400 (404)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHh
Confidence              5789999999999999875

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=5.3e-19  Score=161.10  Aligned_cols=221  Identities=12%  Similarity=0.099  Sum_probs=166.5

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~  152 (415)
                      +....|++.+++.-        ..+..+++++|++|+..++.+++++||+|++....|.+....++    ..|+++..++
T Consensus        58 Pt~~~le~~la~LE--------g~~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d  129 (391)
T d1cl1a_          58 LTHFSLQQAMCELE--------GGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFD  129 (391)
T ss_dssp             HHHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hhHHHHHHHHHHHh--------CCccEEEeccccceeeehhhcccCCCCeEEEecccccchhhhhhhccccccccccccc
Confidence            34567777777765        45789999999999999999999999999999999998776654    5677877764


Q ss_pred             ccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh--cCcEEEEccccCCcccCCCCcccccc
Q 014936          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGV  230 (415)
Q Consensus       153 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~  230 (415)
                      .       .|.+.+++++++++++|++..|.||+..+.+   +++++++|++  +|+++++|+.++...    ...++ .
T Consensus       130 ~-------~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~D---i~~i~~~a~~~~~g~~~vVDnT~atP~----~~~Pl-~  194 (391)
T d1cl1a_         130 P-------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGV----LFKAL-D  194 (391)
T ss_dssp             T-------TCGGGGGGTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTT----SSCGG-G
T ss_pred             C-------ccccccccccccccceeeecccCcccccccc---cHHHHHHHHhccCCcEEEEeccccchh----hhccc-c
Confidence            3       3788999999999999999999999999965   5566666644  599999999987533    11222 2


Q ss_pred             cCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHH
Q 014936          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTL  309 (415)
Q Consensus       231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  309 (415)
                      ++.+   |++.|++|.++..|--+|.+++.+..       +...+... .......++.....+..-|+.     +.-+.
T Consensus       195 ~GaD---ivvhS~TKy~~GhsdvlgG~vv~~~~-------~~~~~~~~~~~~G~~~~p~~a~ll~rgl~T-----L~lR~  259 (391)
T d1cl1a_         195 FGID---VSIQAATKYLVGHSDAMIGTAVCNAR-------CWEQLRENAYLMGQMVDADTAYITSRGLRT-----LGVRL  259 (391)
T ss_dssp             GTCS---EEEEETTTTTTCSSSCCCEEEEECTT-------THHHHHHHHHHTTCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred             cccc---eEEeecchhccccccccccceecccc-------ccccchhhhhcccccCCchhhhhhhccchh-----HHHHH
Confidence            3443   88999999987766544444444322       34444443 234567788888888888876     78888


Q ss_pred             HHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          310 NLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       310 ~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ++..++...+.+.|++.|.+..+.+|
T Consensus       260 ~~~~~nA~~vA~~L~~hp~V~~V~yP  285 (391)
T d1cl1a_         260 RQHHESSLKVAEWLAEHPQVARVNHP  285 (391)
T ss_dssp             HHHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHHHhcccccccccc
Confidence            99999999999999988776655454

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-19  Score=168.51  Aligned_cols=335  Identities=15%  Similarity=0.098  Sum_probs=221.0

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCC-CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCCh
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNG-YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~-y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~  109 (415)
                      .+|+.++||..|.-...  ++ .+|++.+|+++++....+.. +....-..++.+.+++..        ..+.+++++++
T Consensus        38 ~dG~~ylD~~~g~~~~~--lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~sG  107 (404)
T d2byla1          38 VEGRKYFDFLSSISAVN--QGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLF--------NYHKVLPMNTG  107 (404)
T ss_dssp             TTCCEEEESSHHHHTCT--TCBTCHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHH--------TCSEEEEESSH
T ss_pred             CCCCEEEEecCCHHHHh--hcCCCHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcc--------cccccccccCc
Confidence            35888999988752211  22 57899999999988643221 112223345566666654        46799999999


Q ss_pred             HHHHHHHHHHhc----------CCCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCCChhHH
Q 014936          110 TQAIDVAMALLS----------RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDI  166 (415)
Q Consensus       110 ~~al~~~~~~l~----------~~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l  166 (415)
                      ++|+..+++...          .....++...-+|+.....+.....             .+..+|.       .|++.+
T Consensus       108 seA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p~-------~d~~~l  180 (404)
T d2byla1         108 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPAL  180 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEECT-------TCHHHH
T ss_pred             cccchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEecc-------cCHHHH
Confidence            999999998863          1224677777777764443322211             1222221       378999


Q ss_pred             HhhcCCCceEEEecCC-CCccc-cCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCc
Q 014936          167 ESLADQNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS  244 (415)
Q Consensus       167 ~~~~~~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  244 (415)
                      ++.+.....+.++..| ....| ..++.+.+++|.++|++||+++|.||++.++...|... ....++..+.++   +++
T Consensus       181 ~~~l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~-a~~~~gv~PDi~---~~g  256 (404)
T d2byla1         181 ERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLG  256 (404)
T ss_dssp             HHHHTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EEC
T ss_pred             HHhcCCCCeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccc-hhhhcCCCCCEE---EEC
Confidence            9998776666777788 44456 45788899999999999999999999999876655533 223333333333   678


Q ss_pred             cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHh
Q 014936          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKI  323 (415)
Q Consensus       245 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l  323 (415)
                      |.++..++.+|.+++++        ++.+.+.... ..+++.++++.+++.+.|+...+   ++..++.++...++.+.|
T Consensus       257 K~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~~~~~g~~l~~~l  325 (404)
T d2byla1         257 KALSGGLYPVSAVLCDD--------DIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNEL  325 (404)
T ss_dssp             GGGGTTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred             chhhCCCccceeeeech--------hhhhccCCCCCCcCCCcCHHHHHHHHHHHHHHHh---cCchhhhhHhhHHHHHHH
Confidence            99665558999999865        5655554442 23567789999999998865322   234556666677777777


Q ss_pred             hcCCCCcCCC-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHH
Q 014936          324 KEIPCISCPH-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDR  400 (415)
Q Consensus       324 ~~~~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~  400 (415)
                      +++.. ..+. ....|++.-+.+.....   ....++..++ .++||.+.+..    .+.+|++..  .+++++++++++
T Consensus       326 ~~l~~-~~i~~vRg~Gl~~~i~~~~~~~---~~~~~~~~~l-~~~Gvl~~~~~----~~~i~l~PpL~it~~~id~~~~~  396 (404)
T d2byla1         326 MKLPS-DVVTAVRGKGLLNAIVIKETKD---WDAWKVCLRL-RDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIEI  396 (404)
T ss_dssp             HTSCT-TTEEEEEEETTEEEEEECCCSS---CCHHHHHHHH-HHTTEECEEEE----TTEEEECCCTTCCHHHHHHHHHH
T ss_pred             Hhhcc-ccceeeeecccEEEEEEecCCc---hhHHHHHHHH-HhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHH
Confidence            76521 1111 12345555555543211   2455677766 46699987632    368999874  689999999999


Q ss_pred             HHHHHHH
Q 014936          401 IKSFYQR  407 (415)
Q Consensus       401 l~~~~~~  407 (415)
                      |++++++
T Consensus       397 l~~al~~  403 (404)
T d2byla1         397 INKTILS  403 (404)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHc
Confidence            9998864

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=4.7e-19  Score=162.18  Aligned_cols=229  Identities=17%  Similarity=0.099  Sum_probs=167.9

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~~  153 (415)
                      ....|++.|++.-        ..+..+++++|.+|+..++.+++++||+|+++...|++....+    ...|+++..++.
T Consensus        59 T~~~LE~~la~LE--------~~~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~  130 (421)
T d2ctza1          59 TVDVLEKRLAALE--------GGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR  130 (421)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred             HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceeccc
Confidence            4567777777775        4567889999999999999999999999999999998766554    567888887643


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  233 (415)
                      .      -..+..+..++++|++|++-.|.||+..+   .++++|+++|+++|+++++|+.++..-   -...| ..++.
T Consensus       131 ~------~~~~~~~~~~~~~t~li~~EtpsNP~l~v---~Di~~i~~iA~~~g~~~vvDnT~a~tP---~~~~P-l~~Ga  197 (421)
T d2ctza1         131 E------ERPEEFLALTDEKTRAWWVESIGNPALNI---PDLEALAQAAREKGVALIVDNTFGMGG---YLLRP-LAWGA  197 (421)
T ss_dssp             T------CCHHHHHHHCCTTEEEEEEESSCTTTCCC---CCHHHHHHHHHHHTCEEEEECGGGGGG---TSCCG-GGGTC
T ss_pred             c------cCcchhccccCCCceEEEEcCCCcceeEe---cchHHHHHHHHhcCCceEecccccccc---eeccc-cccCC
Confidence            1      13566677788999999999999999998   568888888999999999999986210   01112 23344


Q ss_pred             CCCeEEEccCccccCCCCceEEEEEeeCCCCCCCh------------------------HHHHHHHHhh--ccccCCchh
Q 014936          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK------------------------PKVVERMKKY--FDILGDPAT  287 (415)
Q Consensus       234 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~------------------------~~~~~~~~~~--~~~~~~~~~  287 (415)
                      +   |++.|++|.++..|--+|.+++.+....+..                        ..++.+.+..  .......+|
T Consensus       198 D---iVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~sP  274 (421)
T d2ctza1         198 A---LVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGP  274 (421)
T ss_dssp             S---EEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCH
T ss_pred             c---EEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHHHHHhccCCCCH
Confidence            4   8999999998776665555555433221100                        0112221111  224567788


Q ss_pred             HHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          288 FIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      .....+..-|+.     +.-+.++..++...+.+.|++.|.+..+.+|
T Consensus       275 ~~a~l~~rgl~T-----L~lRm~~~~~nA~~vA~~L~~hp~V~~V~yP  317 (421)
T d2ctza1         275 FEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYP  317 (421)
T ss_dssp             HHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHhcCCcc-----hhhHHHHHHHHHHHHHhhhccCCCeeEEecC
Confidence            888888888887     7888899999999999999988776545555

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.85  E-value=8.3e-19  Score=159.58  Aligned_cols=221  Identities=12%  Similarity=0.100  Sum_probs=167.8

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----HhCCCeEEEee
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----~~~g~~~~~~~  152 (415)
                      +....|++.||+.-        ..+..+++++|++|+..++.+++++||+|++....|++....+    ...|+++..++
T Consensus        67 Pt~~~LE~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~  138 (398)
T d1qgna_          67 PTTVVLEEKISALE--------GAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVID  138 (398)
T ss_dssp             HHHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHh--------CCceEEEecCcchHHHHHHhhcccccccccccccccchhhhhhccccccccccccccc
Confidence            34567888888875        4578899999999999999999999999999999999876655    45677777764


Q ss_pred             ccCCCCCCCChhHH-HhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936          153 LLPDKGWEVDLDDI-ESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF  231 (415)
Q Consensus       153 ~~~~~~~~~~~~~l-~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  231 (415)
                      .       .+.+.. +....+++++|++-.|.||+..+   .++++|+++|+++|+++|+|..++...    ...++ .+
T Consensus       139 ~-------~~~~~~~~~~~~~~t~~v~~EspsNP~l~v---~Di~~ia~ia~~~g~~~vVDnT~atP~----~~~Pl-~~  203 (398)
T d1qgna_         139 P-------ADVGALELALNQKKVNLFFTESPTNPFLRC---VDIELVSKLCHEKGALVCIDGTFATPL----NQKAL-AL  203 (398)
T ss_dssp             S-------SCHHHHHHHHHHSCEEEEEEESSCTTTCCC---CCHHHHHHHHHHTTCEEEEECTTTCTT----TCCTT-TT
T ss_pred             c-------cchhhhhhhhccccceEEEccCcccccccc---chHHHHHHHHhhcCCEEEecceeeccc----cCCch-hh
Confidence            2       244444 44566789999999999999888   558888999999999999999986422    11222 23


Q ss_pred             CCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHHHHH
Q 014936          232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKKTLN  310 (415)
Q Consensus       232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~  310 (415)
                      +.+   |++.|++|.++..+--+|.+++.+       +++...++... ......++.....+..-|+.     +.-+.+
T Consensus       204 GaD---iVihS~TKy~~Ghsdv~~G~v~~~-------~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T-----L~lRm~  268 (398)
T d1qgna_         204 GAD---LVLHSATKFLGGHNDVLAGCISGP-------LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQ  268 (398)
T ss_dssp             TCS---EEEECTTTTTTCSSSCCCEEEEEC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred             CCC---EEEEechhhcCcccceeehhhcch-------hhhhhhhhhhcccCCCcCCHHHHHHHHhcchH-----HHHHHH
Confidence            444   889999999877665555555543       24556665553 34567788888888888876     788889


Q ss_pred             HHHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          311 LLKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       311 ~~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      +..+++..+.+.|+..|.+..+.+|
T Consensus       269 ~~~~nA~~lA~~L~~hp~V~~V~yP  293 (398)
T d1qgna_         269 QQNSTALRMAEILEAHPKVRHVYYP  293 (398)
T ss_dssp             HHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHHhCCCeeecCCC
Confidence            9999999999999988776645455

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.84  E-value=4.2e-20  Score=174.02  Aligned_cols=339  Identities=15%  Similarity=0.088  Sum_probs=213.3

Q ss_pred             CcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHH
Q 014936           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (415)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al  113 (415)
                      +.-+|||-+....    .+..+    ++..++.-++ ..|+..+...+|++.+|+++        ..+.++++++|+.|+
T Consensus        41 ~~v~iDl~sDs~t----~am~~----~~~aa~~~GD-d~Y~~dpt~~~lE~~~a~l~--------G~e~al~~~SGt~An  103 (456)
T d1c7ga_          41 KDIYIDLLTDSGT----NAMSD----KQWAGMMIGD-EAYAGSENFYHLEKTVKELF--------GFKHIVPTHQGRGAE  103 (456)
T ss_dssp             GGCSEECSCSSSC----CCEEH----HHHHHTTSCC-CCSSSCHHHHHHHHHHHHHH--------CCSEEEEESSHHHHH
T ss_pred             cceeeEcccCCCc----ccchH----HHHHHHhccc-hhccCCchHHHHHHHHHHHh--------CCCeEEECCCHHHHH
Confidence            3446788776633    12233    3333333333 26877778899999999999        567899999999999


Q ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHhCCCeEEEeecc--------CCCCCCCChhHHHhhcCC----CceEEEecC
Q 014936          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--------PDKGWEVDLDDIESLADQ----NTVALVIIN  181 (415)
Q Consensus       114 ~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~----~~~~v~i~~  181 (415)
                      .+++++++++||.|+..... ..........|.....+..+        ....+.+|+++|++.+++    .+..+++.+
T Consensus       104 ~~a~~~l~~~Gd~Vi~~~~f-~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~  182 (456)
T d1c7ga_         104 NLLSQLAIKPGQYVAGNMYF-TTTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAV  182 (456)
T ss_dssp             HHHHHHHCCTTEEEEESSCC-HHHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEES
T ss_pred             HHHHHHhcCCCCeEecCcch-HHHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeee
Confidence            99999999999999877653 33444456677776655431        112356899999998864    345778889


Q ss_pred             CCCcc-ccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc----------cCCCCcccc-cccCCCCCeEEEccCccccCC
Q 014936          182 PGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHLV----------FGDKPFVPM-GVFGSTVPILTLGSLSKRWIV  249 (415)
Q Consensus       182 p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~----------~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~  249 (415)
                      |+|+. |.+++.+++++|.++|++||+.+++|+++....          +.+.....+ ........ ++..|++|.++.
T Consensus       183 ~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad-~~s~s~~K~~~~  261 (456)
T d1c7ga_         183 TVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYAD-GCTMSGKKDCLV  261 (456)
T ss_dssp             SBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS-EEEEETTTTTCC
T ss_pred             cccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccc-cEEEeccccccc
Confidence            98875 688999999999999999999999999986421          111111110 00001111 555689999765


Q ss_pred             CCceEEEEEeeCCCCCCChHHHHHHHHhhcc------ccCCchhHHHHHHHHhhCC-CcHHHHHHHHHHHHHHHHHHHHH
Q 014936          250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD------ILGDPATFIQAAVPSILQQ-PDEVFFKKTLNLLKQSVDICYNK  322 (415)
Q Consensus       250 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~  322 (415)
                      ++  .|++++++       .++.++.+....      ..+..+.....++...+.. ...+    ..++..++.+++.+.
T Consensus       262 ~~--GG~i~~~~-------~~l~~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~~~----~l~~r~~~~~~L~e~  328 (456)
T d1c7ga_         262 NI--GGFLCMND-------EEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYE----YIEHRVKQVRYLGDK  328 (456)
T ss_dssp             SS--CEEEEESC-------HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTCHH----HHHHHHHHHHHHHHH
T ss_pred             cc--eeEEEcCC-------HHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHH
Confidence            53  36676654       246665554321      1122333333333333322 1122    233445566778888


Q ss_pred             hhcCCCCcCCCCCCCceEEEEecCc----cccCCCCCHHHHHHHHHhhcCeEEEcCCCC-------------CCCCeEEE
Q 014936          323 IKEIPCISCPHKPEGSMAVMLKLNL----SLLDDIIDDIDFCFKLAKEESVIILPGTAV-------------GLKNWLRV  385 (415)
Q Consensus       323 l~~~~~~~~~~~p~~g~~~~~~l~~----~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-------------~~~~~iRi  385 (415)
                      |++. ++. +..|.++..++++...    ..... .....+...++.+.||...+...+             .....+|+
T Consensus       329 L~~~-g~~-vv~p~g~~~v~vda~~~~~~i~~~~-~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRL  405 (456)
T d1c7ga_         329 LREA-GVP-IVEPTGGHAVFLDARRFCPHLTQDQ-FPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRL  405 (456)
T ss_dssp             HHHT-TCC-BCSSCCSSEEEEEHHHHCTTSCGGG-CHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEE
T ss_pred             HHhc-cCC-cccCCCCcceeEechhhccCCCccc-ccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEE
Confidence            8887 666 4467777777664321    11111 135567777777889975432211             11346999


Q ss_pred             Eee---CChhhHHHHHHHHHHHHHH
Q 014936          386 TFA---VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       386 ~~~---~~~~~l~~~l~~l~~~~~~  407 (415)
                      ++.   .++++|+..++.|+++.++
T Consensus       406 aip~~~~T~e~iD~Vae~i~~v~~~  430 (456)
T d1c7ga_         406 TIPRRVYTYAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             ECCTTSCCHHHHHHHHHHHHHHHTT
T ss_pred             ecCcccCCHHHHHHHHHHHHHHHhh
Confidence            985   4889999999999988753

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.84  E-value=2.5e-19  Score=164.91  Aligned_cols=327  Identities=13%  Similarity=0.087  Sum_probs=204.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCC--CCCCcHHHHHHHHHHHhhhCCCCCCCCc--EEEeCChHHHHHHHHHHhcCCCCE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLSRPGAN  126 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~--i~i~~g~~~al~~~~~~l~~~gd~  126 (415)
                      .+.+++|++|+.+.    ....++  ...-..+.|+.+++++      ++++++  +++++|+|+++++++..+..+++.
T Consensus         9 ~~~~~~V~~A~~~~----~~~~~~~~~~~~~~~~r~~l~~l~------~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~   78 (361)
T d1m32a_           9 LTTSRTVKEAMLFD----SCTWDDDYNIGVVEQIRQQLTALA------TASEGYTSVLLQGSGSYAVEAVLGSALGPQDK   78 (361)
T ss_dssp             CCCCHHHHHTTCCC----CCTTSHHHHTTTHHHHHHHHHHHH------CSSSSEEEEEEESCHHHHHHHHHHHSCCTTCC
T ss_pred             CCCCHHHHHHhhhh----ccCCCcHHHHHHHHHHHHHHHHHh------CCCCCCEEEEECCCHHHHHHHHHHHhhhhccc
Confidence            45677787765432    111221  1245689999999998      456665  778889999999999999988888


Q ss_pred             EEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          127 ILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       127 vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      +++....+..  ........+.....+..........+.+.......++++.+.+++.+|.||...+   +++|+++|++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~---i~~i~~~~~~  155 (361)
T d1m32a_          79 VLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGALAHR  155 (361)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHH
T ss_pred             cceeeehhhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhccCccceEEEeeecccccchh---hhhhhhhhcc
Confidence            7777666543  2333455566655555433333223344455566778999999999999999965   7777888999


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCC---------CCCChHHHH-H
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPC---------GMFRKPKVV-E  273 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~---------~~~~~~~~~-~  273 (415)
                      +|+++++|.+++.+.    .+..+..++.+   ++++|.+|+++. +|  +|+++.+++.         ......... .
T Consensus       156 ~g~~~~vDa~qs~G~----~~~d~~~~~~D---~~~~s~~K~l~gp~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T d1m32a_         156 YGKTYIVDAMSSFGG----IPMDIAALHID---YLISSANKCIQGVPG--FAFVIAREQKLAACKGHSRSLSLDLYAQWR  226 (361)
T ss_dssp             HTCEEEEECTTTTTT----SCCCTTTTTCS---EEEEESSSTTCCCSS--EEEEEEEHHHHTTCTTCCSCSTTCHHHHHH
T ss_pred             cceeeEeecccccCc----ccccccccccc---eEEeeecccccCCCC--ceEEEechhhhhhhccccccccccchhhhc
Confidence            999999999999733    33344444443   888899998744 46  7888776310         000000011 1


Q ss_pred             HHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEEEEecCccc
Q 014936          274 RMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAVMLKLNLSL  349 (415)
Q Consensus       274 ~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~l~~~~  349 (415)
                      ..... .....+++.....++...+..... ...+...++.+...+.+.+.++.. ++.....+.  ....+.+.++...
T Consensus       227 ~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~rs~~v~~~~~p~~~  305 (361)
T d1m32a_         227 CMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDP  305 (361)
T ss_dssp             HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCT
T ss_pred             cccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhc-CCcccCChhhcCCcEEEEECCCCC
Confidence            11111 112345566666666655543222 234455566666777777777776 444222221  1223344554321


Q ss_pred             cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936          350 LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       350 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~  405 (415)
                         ..+..++...+ .++||.+.+|... .++.+||++  ..+++|++.+++.|++++
T Consensus       306 ---~~~~~~~~~~l-~~~gi~i~~G~~~-~~~~~Ris~~g~~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         306 ---QYRFSEFYRRL-KEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAM  358 (361)
T ss_dssp             ---TCCHHHHHHHH-HHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred             ---CCCHHHHHHHH-HHCCcEEECCCcC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHc
Confidence               12455665555 6779999887643 357899996  368899999999998874

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.84  E-value=1.2e-18  Score=155.75  Aligned_cols=216  Identities=14%  Similarity=0.118  Sum_probs=163.1

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeeccCC
Q 014936           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPD  156 (415)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~~~~  156 (415)
                      .|++.+|+.-        ..+..+++++|++|+..++.+++++||+|++..+.|.+....    +...|+++..++.   
T Consensus         2 aLE~~la~Le--------g~~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~---   70 (331)
T d1pffa_           2 ALEGKIAKLE--------HAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             HHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecc---
Confidence            5788999886        467889999999999999999999999999999999875544    5678999888754   


Q ss_pred             CCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHH-HhhcCcEEEEccccCCcccCCCCcccccccCCCC
Q 014936          157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET-ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (415)
Q Consensus       157 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~-~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  235 (415)
                          -|.+.++++++++++.|++..|.||+..+.+   +++++++ ++++|+++|+|..++....-    .++ .++.+ 
T Consensus        71 ----~d~~~~~~~i~~~t~~i~~Es~~np~~~v~d---~~~~~~~~a~~~~~~~vVDnT~atp~~~----~pl-~~GaD-  137 (331)
T d1pffa_          71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-DLGVD-  137 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-GGTCS-
T ss_pred             ----cchhhHhhhcccccceeeeeccccccccccc---chhhhhhhhcccCceEEeeccccccccc----ccc-ccCCC-
Confidence                3789999999999999999999999999955   5555555 36789999999998753311    122 23333 


Q ss_pred             CeEEEccCccccCCCCceE-EEEEeeCCCCCCChHHHHHHHHh--hcc-ccCCchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936          236 PILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKK--YFD-ILGDPATFIQAAVPSILQQPDEVFFKKTLNL  311 (415)
Q Consensus       236 ~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  311 (415)
                        |++.|++|.++..|--+ |.++.++        +.....+.  ... .....++.....+..-|+.     +..+.++
T Consensus       138 --iVv~S~TKy~~Gh~d~~~G~v~~~~--------~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~T-----l~~Rm~~  202 (331)
T d1pffa_         138 --IVVHSATKYINGHTDVVAGLVCSRA--------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKR  202 (331)
T ss_dssp             --EEEEETTTTTSSSSSCCCEEEEECH--------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHH
T ss_pred             --EEEecchhhcCCCCccccccccccc--------cchhhhhhhhhhhccCCCCCHHHHHHHHHHHHH-----HHHHHHH
Confidence              88999999987755554 4444432        23333222  222 3456778877777777754     7888899


Q ss_pred             HHHHHHHHHHHhhcCCCCcCCCCC
Q 014936          312 LKQSVDICYNKIKEIPCISCPHKP  335 (415)
Q Consensus       312 ~~~~~~~l~~~l~~~~~~~~~~~p  335 (415)
                      ..++...+.+.|++.|.+..+.+|
T Consensus       203 ~~~nA~~lA~~L~~hp~V~~V~yP  226 (331)
T d1pffa_         203 AAENAQKVAEFLHEHKAVKKVYYP  226 (331)
T ss_dssp             HHHHHHHHHHHHHHCTTCCCEECT
T ss_pred             HHHHHHHHHHhhhhCCcEEeeccc
Confidence            999999999999988887656565

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.84  E-value=3.9e-18  Score=155.48  Aligned_cols=283  Identities=14%  Similarity=0.113  Sum_probs=198.1

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~~~  153 (415)
                      ....|++.|++.-        ..+..+++++|++|+..++.++.++||.|++.+..|.+....    +...|+.+..++.
T Consensus        60 T~~~le~~la~LE--------g~~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~  131 (394)
T d1e5ea_          60 TVSNLEGKIAFLE--------KTEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINT  131 (394)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCcceeeeccchHHHHHHHHhhcccccccccccceeehhhHhHHHHhhccceeeeccCC
Confidence            4566777777765        466889999999999999999999999999999999875543    5678999888864


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH-hhcCcEEEEccccCCcccCCCCcccccccC
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~~~~~~~~~~~  232 (415)
                             .|.+.+++++++++++|++..|.||+..+.+   ++++++.+ +++|+++++|..++...    ...|+ .++
T Consensus       132 -------~d~~~~~~~i~~~t~lv~~Etp~NP~l~v~D---i~~~~~~~~~~~g~~vvvDnT~atP~----~~~Pl-~~G  196 (394)
T d1e5ea_         132 -------AIPGEVKKHMKPNTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPM----ITNPV-DFG  196 (394)
T ss_dssp             -------TSTTHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTT----TCCGG-GGT
T ss_pred             -------CCHHHHHHhhcccccEEEEeccCCcceeeeh---hhhhhhccccccCeEEEecCcccCcc----cCCch-hcC
Confidence                   3678999999999999999999999999855   56666655 45789999999987522    11222 334


Q ss_pred             CCCCeEEEccCccccCCCCce-EEEEEeeCCCCCCChHHHHHHHHhh--cc-ccCCchhHHHHHHHHhhCCCcHHHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKY--FD-ILGDPATFIQAAVPSILQQPDEVFFKKT  308 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~  308 (415)
                      .+   |++.|++|.++..+-- .|.+++++        +.....+..  .. .....+|.....+..-|+.     +.-+
T Consensus       197 aD---iVvhS~TKy~~GhsDv~~G~v~~~~--------~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~T-----L~lR  260 (394)
T d1e5ea_         197 VD---VVVHSATKYINGHTDVVAGLICGKA--------DLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIR  260 (394)
T ss_dssp             CS---EEEEETTTTTTCSSCCCCEEEEECH--------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred             CC---EEEechhhhcCCCcccccccccchh--------hHHHHHHHHHHHHhhCCCCChHHHHHHHhhchh-----HHHH
Confidence            44   8999999998765544 45555543        344443322  22 3566788888888888987     7888


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCcCCCCCC----------------CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEE-
Q 014936          309 LNLLKQSVDICYNKIKEIPCISCPHKPE----------------GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVII-  371 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v-  371 (415)
                      .++..+++..+.+.|++.|.+..+.+|.                .|..+.+.+.        .+.+...+++..-++.. 
T Consensus       261 m~r~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~~sf~~~--------~~~~~a~~f~~~l~l~~~  332 (394)
T d1e5ea_         261 MKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILK--------SGFEGAKKLLDNLKLITL  332 (394)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEET--------THHHHHHHHHHTCSSSEE
T ss_pred             HHHHHHHHHHHHHHHhhcCCccEEeCCCcccccchhhhhcccccCCCeeeeecc--------CCHHHHHHHHHhCCccce
Confidence            8999999999999999987765455542                1323333443        23333445555544322 


Q ss_pred             --EcCCCCC-----------------------CCCeEEEEeeCChhhHHHHHHHHHHHHHHHH
Q 014936          372 --LPGTAVG-----------------------LKNWLRVTFAVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       372 --~~g~~~~-----------------------~~~~iRi~~~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                        +-|....                       .++.||+|++.  |+.+.+++.|.++++++.
T Consensus       333 a~SlGg~eSLi~~p~~~th~~~~~~~r~~~Gi~~~liRlSVGl--Ed~eDLi~Dl~qAl~~l~  393 (394)
T d1e5ea_         333 AVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI--EDADELIADFKQGLDALL  393 (394)
T ss_dssp             SSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHH
T ss_pred             eeccCCccceeECccccccccCCHHHHHhcCCCcCEEEEEecc--CCHHHHHHHHHHHHHHhh
Confidence              1122110                       04579999987  566777777777776653

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=3.3e-19  Score=162.21  Aligned_cols=319  Identities=17%  Similarity=0.154  Sum_probs=204.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL  128 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi  128 (415)
                      .+.+++|++|+.+..    ....++  ..-..+.++.+++.+      +.+.+.+++++|+|.++++++..++++|++|+
T Consensus         9 ~~v~~~V~~am~~~~----~~hr~~~f~~i~~~~~~~l~~ll------~~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vl   78 (348)
T d1iuga_           9 VRLHPKALEALARPQ----LHHRTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVL   78 (348)
T ss_dssp             CCCCHHHHHHHHSCC----CCTTSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCCHHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCchHHHHHHHHHhcccccccce
Confidence            456788888875432    211111  012345555555555      24567888999999999999999999999998


Q ss_pred             EcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhc-
Q 014936          129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-  205 (415)
Q Consensus       129 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-  205 (415)
                      +...++++  +...++.+|.++..+.....  ..++++.   ....+.+.+++++..+.||...+   +++|.++|+++ 
T Consensus        79 v~~~G~f~~~~~~~a~~~~~~~~~~~~~~g--~~~~~~~---~~~~~~~~v~~~h~eTstG~~~~---i~~i~~~~~~~~  150 (348)
T d1iuga_          79 VPVYGKFSERFYEIALEAGLVVERLDYPYG--DTPRPED---VAKEGYAGLLLVHSETSTGALAD---LPALARAFKEKN  150 (348)
T ss_dssp             EEECSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCTTT---SCCSSCSEEEEESEETTTTEECC---HHHHHHHHHHHC
T ss_pred             eecchHHHHHHHHHHHhcCcccccccccCC--Ccccccc---ccccCCCeeEEEecchhhhhhcc---HHHHHHHHHhhh
Confidence            88877654  45567888888888776432  2344433   33457788999999999999976   45555666565 


Q ss_pred             -CcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCC--------CCCChHHHHHHH
Q 014936          206 -KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPC--------GMFRKPKVVERM  275 (415)
Q Consensus       206 -~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~--------~~~~~~~~~~~~  275 (415)
                       +.++++|.+.+.+.    .+.++...+.+   +++.|..|.+ +.+|  +|+++.+++.        ..+   ++...+
T Consensus       151 ~~~l~~vDavss~g~----~~i~~d~~~iD---~~~~~sqK~l~gppG--~~~v~~s~~~le~~~~~~~~~---dl~~~~  218 (348)
T d1iuga_         151 PEGLVGADMVTSLLV----GEVALEAMGVD---AAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYL---DLAREL  218 (348)
T ss_dssp             TTCEEEEECTTTBTT----BCCCSGGGTCS---EEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTT---CHHHHH
T ss_pred             ccceeechhhhcccc----cccccccccCC---EEEeccccceecCCc--eeeeeechHHHhhhccccccc---chhhhh
Confidence             47889999998733    33445444443   7777889998 6678  7888886421        111   122222


Q ss_pred             Hhh--ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC-CceEEEEecCccccCC
Q 014936          276 KKY--FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE-GSMAVMLKLNLSLLDD  352 (415)
Q Consensus       276 ~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-~g~~~~~~l~~~~~~~  352 (415)
                      ...  ..+.++++.....++.++|+...++ .+++.+..+...+.+...++.. ++... ... ......+.+|..    
T Consensus       219 ~~~~~~~~~~Tp~v~~i~~l~~aL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-gl~~~-~~~~s~~v~~~~~P~g----  291 (348)
T d1iuga_         219 KAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPV-PKRFSPAVAAFYLPEG----  291 (348)
T ss_dssp             HHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSBCTTCEEEECCTT----
T ss_pred             hhhccCcccccccchHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhhhhhhh-hhccC-hhhcCCeEEEEECCCC----
Confidence            221  2234567777777777777643223 3334444444445555555554 55522 111 112355666642    


Q ss_pred             CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e-CChhhHHHHHHHHHHHHHHH
Q 014936          353 IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A-VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       353 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~l~~~l~~l~~~~~~~  408 (415)
                       .+..++... |+++||.+.+|...-....+||+. + .+.++++.+++.|++++++.
T Consensus       292 -~~~~~~~~~-l~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l~~~  347 (348)
T d1iuga_         292 -VPYARVKEA-FAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI  347 (348)
T ss_dssp             -CCHHHHHHH-HHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHH-HHHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence             256666555 577899999887544456899998 3 67899999999999999875

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=7.6e-19  Score=161.88  Aligned_cols=331  Identities=19%  Similarity=0.175  Sum_probs=217.6

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++|+..|.-...  ++ .+|++.+++++++.+.....+.   -..+.+..+++.+.....  ...+.++++++|+
T Consensus        34 ~dG~~ylD~~~g~~~~~--lGh~hp~v~~a~~~~~~~~~~~~~~---~~~~~~~~la~~l~~~~~--~~~~~v~f~~sGs  106 (387)
T d1vefa1          34 AEGNEYIDCVGGYGVAN--LGHGNPEVVEAVKRQAETLMAMPQT---LPTPMRGEFYRTLTAILP--PELNRVFPVNSGT  106 (387)
T ss_dssp             TTSCEEEESSHHHHTCT--TCBTCHHHHHHHHHHHHHCCCCCTT---SCCHHHHHHHHHHHHTSC--TTEEEEEEESSHH
T ss_pred             CCCCEEEEcchhHHhhh--hcCCcHHHHHHHHHHHHhhcccccc---cCCchHHHHHHHhhhhcc--ccceeeccccCch
Confidence            35889999977642211  33 4799999999998864322221   123566666666654222  2235799999999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC-------------eEEEeeccCCCCCCCChhHHHhhcCCCce
Q 014936          111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESLADQNTV  175 (415)
Q Consensus       111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  175 (415)
                      +|++.+++...  ..-..|+....+|++....+.....             .+..+|.       .|++.|++.++++..
T Consensus       107 eA~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~~~~~~iA  179 (387)
T d1vefa1         107 EANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEETA  179 (387)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTTEE
T ss_pred             HHHHHHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-------CCHHHHHHhcCCCeE
Confidence            99999998864  1226888889888876544433221             1222221       378999999876654


Q ss_pred             EEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCce
Q 014936          176 ALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (415)
Q Consensus       176 ~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r  253 (415)
                       .++..| ....|. ..+.+.+++|.++|++||+++|.||++.++...|.... ...++..+.++   +++|.+ ..|..
T Consensus       180 -avi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~-~~~~~v~PDi~---~~gK~l-~gG~~  253 (387)
T d1vefa1         180 -AVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFA-FEHFGIVPDIL---TLAKAL-GGGVP  253 (387)
T ss_dssp             -EEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSST-HHHHTCCCSEE---EECGGG-GTTSS
T ss_pred             -EEEEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCcc-cccCCcCCcee---eecccC-CCCcc
Confidence             455677 444565 47889999999999999999999999998765554322 22333333334   467994 56788


Q ss_pred             EEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          254 LGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       254 ~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      ++.++..+        ++.+.+... ...+++.+|++..++.+.|+...   -.+..+++++.-+++.+.|+.+.. ..+
T Consensus       254 ~~~~~~~~--------~~~~~~~~~~~g~T~~gnPla~aaa~a~L~~l~---~~~~~~~v~~~g~~l~~~L~~l~~-~~v  321 (387)
T d1vefa1         254 LGVAVMRE--------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLE---RTRLWERAAELGPWFMEKLRAIPS-PKI  321 (387)
T ss_dssp             CEEEEEEH--------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHH---HHTTHHHHHHHHHHHHHHHHTSCC-TTE
T ss_pred             ccccccce--------eeeeccccCCccccCCCCcchhhhcccchhhcc---cccccchHhhhhHHHHHHHHhcCC-Cce
Confidence            88888765        455554443 23456779999999999886522   134456667777778888877522 111


Q ss_pred             C-CCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHH
Q 014936          333 H-KPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFY  405 (415)
Q Consensus       333 ~-~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~  405 (415)
                      . ...-|++.-+.++.       +....+..++.++|+.+.+..    .+.+|+++  ..+++++++++++|++++
T Consensus       322 ~~vrg~Gl~~~ie~~~-------~~~~~~~~~~~~~g~l~~~~g----~~~ir~~Ppl~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         322 REVRGMGLMVGLELKE-------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             EEEEEETTEEEEEESS-------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             EEEeecceEEEEEEeC-------CchHHHHHHHHHCCCeEEecC----CCEEEEECCccCCHHHHHHHHHHHHHHh
Confidence            1 22345666667754       233445555566788776533    36789987  478999999999999876

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.83  E-value=5.3e-19  Score=164.23  Aligned_cols=345  Identities=17%  Similarity=0.144  Sum_probs=211.0

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++||..|.-...  ++ .+|.+.+|+++++.+....   .........+.+++.+....    ..+.+.++.+++
T Consensus        36 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~Ai~~q~~~~~~~---~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~sgs  106 (404)
T d1z7da1          36 VNDKRYYDFLSAYSSVN--QGHCHPNILNAMINQAKNLTIC---SRAFFSVPLGICERYLTNLL----GYDKVLMMNTGA  106 (404)
T ss_dssp             TTCCEEEESSHHHHTTT--TCBTCHHHHHHHHHHHTTCSCC---CTTSEEHHHHHHHHHHHHHH----TCSEEEEESSHH
T ss_pred             CCCCEEEEccccHHHHh--hhcCcHHHHHHHHHHHHhCCCc---ccccchHHHHHHHHhhhhcc----ccceeeeecccc
Confidence            35889999987742211  33 4899999999988753321   11111222233333333221    457899999999


Q ss_pred             HHHHHHHHHhc----------CCCCEEEEcCCCCcchHHHHHhCCCeEE----EeeccCCC--CCCCChhHHHhhcCCCc
Q 014936          111 QAIDVAMALLS----------RPGANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDK--GWEVDLDDIESLADQNT  174 (415)
Q Consensus       111 ~al~~~~~~l~----------~~gd~vi~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~--~~~~~~~~l~~~~~~~~  174 (415)
                      +++..+++...          .....++....+|+..............    ..+..+..  ...-+.+.++..+.+..
T Consensus       107 ~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  186 (404)
T d1z7da1         107 EANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPN  186 (404)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTSTT
T ss_pred             chHHHHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccccchHHHHHHHhcCCC
Confidence            99999987753          1224677777777765443322211100    00100000  00125777887777767


Q ss_pred             eEEEecCC-CCccccC-CCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          175 VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       175 ~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      .+.++..| +...|.. .+.+.+++|.++|+++|+++|.||++.++...|... ....++..+.++   +++|.++..+.
T Consensus       187 iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~-~~e~~gv~PDiv---t~gK~l~gG~~  262 (404)
T d1z7da1         187 VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---LLGKALSGGHY  262 (404)
T ss_dssp             EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGGTTSS
T ss_pred             EEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccc-cccccCCCCCEE---EEcccccCCCC
Confidence            77788888 4556665 677889999999999999999999999876554432 223334333334   67899765558


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCc-HHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPD-EVFFKKTLNLLKQSVDICYNKIKEIPCIS  330 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  330 (415)
                      .+|.+++++        ++.+.+.... ..++..+|++..|+.+.|+... ++..++..+.-....+.+.+.+++.+.+.
T Consensus       263 p~~~v~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~  334 (404)
T d1z7da1         263 PISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVR  334 (404)
T ss_dssp             CCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred             CcccccchH--------HHHccCCCCCcCcCCCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeE
Confidence            999999865        5666555442 3356778999999998886422 23344444444555556666666664443


Q ss_pred             CCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          331 CPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       331 ~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      .  ....|.+..+.+....    ....++...+ .++||.+.|..    .+.||+..+  .+++++++++++|.++++++
T Consensus       335 ~--vrg~Gl~~~i~~~~~~----~~~~~~~~~l-~~~Gl~~~~~~----~~~ir~~Ppl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         335 D--VRGKGLLCAIEFKNEL----VNVLDICLKL-KENGLITRDVH----DKTIRLTPPLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             E--EEEETTEEEEEECTTT----CCHHHHHHHH-HHTTEECCEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             E--EEeeCcEEEEEEcCCc----ccHHHHHHHH-HhCCeEEecCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHHhh
Confidence            1  2334666666675421    2345565655 56799986643    467999874  68999999999999999765

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=1.5e-19  Score=171.13  Aligned_cols=316  Identities=12%  Similarity=0.057  Sum_probs=194.4

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEeCChH-HHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC
Q 014936           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT-QAIDVAMALL---SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP  155 (415)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~-~al~~~~~~l---~~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~  155 (415)
                      ..++..+.+++.+..|.+... ..++++|++ .++.+++.++   ..+++.|+++...|.++...+...|++.+.++..+
T Consensus        93 ~~le~~~~~~~~~l~g~~~~~-~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~  171 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHSVA-SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL  171 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCC-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHhCCCccc-CccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeec
Confidence            467777888877766644333 445555555 4555544444   35678999999999999999999999988876433


Q ss_pred             -CCCCCCChhHHHhhcC----CCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccc-cc
Q 014936          156 -DKGWEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MG  229 (415)
Q Consensus       156 -~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~  229 (415)
                       ++.+.+|+++|+++++    +++.+|+++.|++++|.+   +++++|+++|+++|+++++|++|+.+......... ..
T Consensus       172 ~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~---~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~  248 (445)
T d3bc8a1         172 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA  248 (445)
T ss_dssp             ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             cCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeee---hhHHHHHHHHHHhCCcEEEEccchhhhhhccccchhcc
Confidence             3457899999998874    357888999999999999   67999999999999999999999864321111111 11


Q ss_pred             ccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccC-CchhHHHHHHHHhhCCCcHHHHHHH
Q 014936          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQAAVPSILQQPDEVFFKKT  308 (415)
Q Consensus       230 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~  308 (415)
                      .+..-  .++..|.+|.++.|. ..|+++.++       ..+.+.+........ ........+....+.   ...+...
T Consensus       249 ~~~~v--d~~~~s~hK~~~~p~-g~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~  315 (445)
T d3bc8a1         249 RVGRI--DAFVQSLDKNFMVPV-GGAIIAGFN-------EPFIQDISKMYPGRASASPSLDVLITLLSLG---CSGYRKL  315 (445)
T ss_dssp             HHSCC--CEEEEEHHHHHSCCS-SCEEEEESC-------HHHHHHHHHHSCSCBCSHHHHHHHHHHHHHH---HHHHHHH
T ss_pred             CcCCc--ceEEecCccccccCC-CCceeeeCC-------hHHHHHHHHHHhhcccCcchHHHHHHHHHHh---hhcchhh
Confidence            12111  166778899865442 356666654       245565554432222 222233333332322   2445555


Q ss_pred             HHHHHHHHHHHHHHhhcCC---CCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCCC-----
Q 014936          309 LNLLKQSVDICYNKIKEIP---CISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGTA-----  376 (415)
Q Consensus       309 ~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~-----  376 (415)
                      .+...++.+++.+.|+++.   +......+......+..+.........+..++... |.+.||...    ++..     
T Consensus       316 ~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~-L~~~gI~~~~~~~~~~~~~i~~  394 (445)
T d3bc8a1         316 LKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSM-LFTRQVSGARAVPLGNVQTVSG  394 (445)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHH-HHHTTCCSCEEECSCCEEEETT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccccCCCCHHHHHHH-HHHcCCCcceeeccccccchhh
Confidence            5555666666666665421   33323244545555544433211111123344444 456676311    1110     


Q ss_pred             -----CCC------CCeEEEEee--CChhhHHHHHHHHHHHHHHHHHHhh
Q 014936          377 -----VGL------KNWLRVTFA--VDPYSLEECLDRIKSFYQRHAKQLQ  413 (415)
Q Consensus       377 -----~~~------~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~~~~~~  413 (415)
                           |+.      ..++|++++  ++++|++.++++|.++++++++++.
T Consensus       395 ~~~~~~g~~~~~~~~~~i~i~~~~~~T~eDID~~v~~L~kilk~~rk~~~  444 (445)
T d3bc8a1         395 HTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQT  444 (445)
T ss_dssp             EEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhhcCCCCccCCCCeEEEeCcCCCCHHHHHHHHHHHHHHHHHHHhhhc
Confidence                 111      356899884  6889999999999999999988764

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=8.3e-19  Score=164.12  Aligned_cols=354  Identities=14%  Similarity=0.106  Sum_probs=215.4

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++|+..|.-...  ++ .+|.+.+++++++....+....  ....+.+..+|+.+.+..+ +-..+.++++++|+
T Consensus        37 ~dG~~ylD~~~g~~~~~--lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGs  111 (425)
T d1sffa_          37 VEGREYLDFAGGIAVLN--TGHLHPKVVAAVEAQLKKLSHTCFQ--VLAYEPYLELCEIMNQKVP-GDFAKKTLLVTTGS  111 (425)
T ss_dssp             TTCCEEEESSHHHHTCT--TCBTCHHHHHHHHHHTTTCSCCCTT--TEECHHHHHHHHHHHHHSS-CSSCEEEEEESSHH
T ss_pred             CCCCEEEEcCcCHHhhc--ccCCcHHHHHHHHHHHhhcCCcccc--cccCcHHHHHHHHHHhhhh-hcccceeeeecccc
Confidence            35889999988742211  33 5799999999998764321111  1112344445555554332 11236899999999


Q ss_pred             HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhC-CCe-------------EEEeec--cCCCCCCC----ChhHHH-
Q 014936          111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIE-------------VRHFDL--LPDKGWEV----DLDDIE-  167 (415)
Q Consensus       111 ~al~~~~~~l~~--~gd~vi~~~p~y~~~~~~~~~~-g~~-------------~~~~~~--~~~~~~~~----~~~~l~-  167 (415)
                      +|++.+++....  .-.+|+....+|++....+... |..             ....+.  ...+....    +.+.+. 
T Consensus       112 eA~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (425)
T d1sffa_         112 EAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFK  191 (425)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHH
T ss_pred             chhhhHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHH
Confidence            999999988641  1257889999998876655432 210             111111  00000000    011111 


Q ss_pred             hhcCCCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcc
Q 014936          168 SLADQNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (415)
Q Consensus       168 ~~~~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK  245 (415)
                      ........+.++..| +...|. ..+.+.++.|.++|+++|+++|.||++.++...|.... ...++..+.++   +++|
T Consensus       192 ~~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a-~~~~gv~PDi~---~~gK  267 (425)
T d1sffa_         192 NDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFA-MEQMGVAPDLT---TFAK  267 (425)
T ss_dssp             HTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSG-GGGTTSCCSEE---EECG
T ss_pred             hcccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhH-HHhcCCCccce---eccc
Confidence            112234566777888 334565 57889999999999999999999999998665554322 22333333333   5789


Q ss_pred             ccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHh
Q 014936          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKI  323 (415)
Q Consensus       246 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l  323 (415)
                      .+ ..|+++|.+++++        ++.+.+... ...+++.++++.+|+.+.|+...+ +..++..+.-...++.+.+.+
T Consensus       268 ~l-~gG~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~  338 (425)
T d1sffa_         268 SI-AGGFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIA  338 (425)
T ss_dssp             GG-GTSSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc-CCCcceEEEEEcH--------HHHHhhCCCCCCCCCCcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhH
Confidence            95 5578999999976        566655544 234577889999999998875432 333334344444455555555


Q ss_pred             hcCCCCcCCCCCCCceEEEEecCccccCCCCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHH
Q 014936          324 KEIPCISCPHKPEGSMAVMLKLNLSLLDDIID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECL  398 (415)
Q Consensus       324 ~~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l  398 (415)
                      ++.|.+. . ....|.+..+.+.........+   ...+...+ .++||.+.++...  .+.+|+++.  +++++|++++
T Consensus       339 ~~~~~v~-~-vrg~Gl~~~i~f~~~~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~g~~--~n~i~~~PpL~it~~eid~~l  413 (425)
T d1sffa_         339 EKHPEIG-D-VRGLGAMIAIELFEDGDHNKPDAKLTAEIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGL  413 (425)
T ss_dssp             HTCTTEE-E-EEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHH-HHTTEECEEESTT--SCEEEECCCTTCCHHHHHHHH
T ss_pred             hhCCceE-E-EEccccEEEEEEeccCccCCccHHHHHHHHHHH-HHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHHH
Confidence            5665433 1 2344556666554322111112   23444554 5679998875432  367999874  7899999999


Q ss_pred             HHHHHHHHHH
Q 014936          399 DRIKSFYQRH  408 (415)
Q Consensus       399 ~~l~~~~~~~  408 (415)
                      ++|++++++.
T Consensus       414 ~~l~~al~ei  423 (425)
T d1sffa_         414 EIISQCFDEA  423 (425)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998875

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.82  E-value=5.6e-19  Score=165.18  Aligned_cols=346  Identities=14%  Similarity=0.062  Sum_probs=204.6

Q ss_pred             ccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHH
Q 014936           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~  111 (415)
                      .+|+.++|+..+.-....+. .+|++.+++++++....... .+    ......+++.+....+   ..+.++++++|++
T Consensus        49 ~~G~~ylD~~~~~~~~~lGh-~hp~i~~ai~~~~~~~~~~~-~~----~~~~~~la~~~~~~~~---~~~~v~f~~sGse  119 (427)
T d2gsaa_          49 VDGNRYIDYVGTWGPAICGH-AHPEVIEALKVAMEKGTSFG-AP----CALENVLAEMVNDAVP---SIEMVRFVNSGTE  119 (427)
T ss_dssp             TTSCEEEESSGGGTTTTTCB-TCHHHHHHHHHHHTTCSCCS-SC----CHHHHHHHHHHHHHST---TCSEEEEESSHHH
T ss_pred             CCCCEEEEechhHHHHhccC-CcHHHHHHHHHHHHhcCccc-cc----hhHHHHHHHHHHhhCC---ccccccccCCcHH
Confidence            45889999977743222122 48999999999987643321 11    2455556666655433   4578999999999


Q ss_pred             HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHh--------CCCeEE-Eee--ccCC--CCCCCChhHHHhhcCC--Cc
Q 014936          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAF--------RHIEVR-HFD--LLPD--KGWEVDLDDIESLADQ--NT  174 (415)
Q Consensus       112 al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~--------~g~~~~-~~~--~~~~--~~~~~~~~~l~~~~~~--~~  174 (415)
                      |++.+++...  ..-.+|+....+|++....+..        .+.... .+.  ..+.  .....|++.+++.+++  ..
T Consensus       120 A~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~  199 (427)
T d2gsaa_         120 ACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGE  199 (427)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEECTTCHHHHHHHHTTSTTT
T ss_pred             HHHHHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccCcchHHHHHHHHHhCCCC
Confidence            9999999764  1236888889999875433221        111100 000  0000  0012478999988875  34


Q ss_pred             eEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCc
Q 014936          175 VALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (415)
Q Consensus       175 ~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~  252 (415)
                      .+.++..| ....|. ..|.+.+++|.++|++||+++|.||++.++ ..|.. .....++..+.++   +++|.+ ..|+
T Consensus       200 iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~-r~g~~-~~~~~~gi~PDi~---~~gK~l-ggG~  273 (427)
T d2gsaa_         200 IAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RIAYG-GVQEKFGVTPDLT---TLGKII-GGGL  273 (427)
T ss_dssp             EEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-CHHHHTTCCCSEE---EECGGG-GTTS
T ss_pred             eEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccc-eeccc-chHHhcCCCHHHH---hhhhcc-CCCc
Confidence            56677778 334565 468888999999999999999999999886 33432 2223344333344   457984 5688


Q ss_pred             eEEEEEeeCCCCCCChHHHHHHHHhh----ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHHHHHHHhhcCC
Q 014936          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVDICYNKIKEIP  327 (415)
Q Consensus       253 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~  327 (415)
                      .+|.+++++        ++.+.+...    ...++..+|++.+++.+.|+...+ +..++..+.-...++.+.+..++.+
T Consensus       274 p~~a~~~~~--------~i~~~~~~~~~~~~~~T~~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~  345 (427)
T d2gsaa_         274 PVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETG  345 (427)
T ss_dssp             CCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeeeeehH--------HHHHHhcccCCCcCCCCCCCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhcC
Confidence            999988865        566655432    123567889999988888764322 2223333333333333333334442


Q ss_pred             CCcCCCCCCCceEEEEecCccccCC-----CCC---HHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEeeCChhhHHHHHH
Q 014936          328 CISCPHKPEGSMAVMLKLNLSLLDD-----IID---DIDFCFKLAKEESVIILPGTAVGLKNWLRVTFAVDPYSLEECLD  399 (415)
Q Consensus       328 ~~~~~~~p~~g~~~~~~l~~~~~~~-----~~~---~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~~~~~l~~~l~  399 (415)
                       +.......++++-+. +......+     ..+   ...+...++ ++||.+.|+..    ..+-+++.+++++|+++++
T Consensus       346 -~~~~v~~~ggm~~i~-~~~~~v~~~~~~~~~d~~~~~~~~~~ll-~~Gv~l~p~~~----~~~~~~l~~Te~dId~~l~  418 (427)
T d2gsaa_         346 -HAACGGQVSGMFGFF-FTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF----EAGFTSLAHTEEDIDATLA  418 (427)
T ss_dssp             -CCCEEEEETTEEEEE-SSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTTCCHHHHHHHHH
T ss_pred             -CCcEEcccCCeEEEE-EeccCCCCHHHhhcccHHHHHHHHHHHH-HCCEEECCCCC----cceeCCCCCCHHHHHHHHH
Confidence             221112223433221 21110000     001   123444454 56999887542    2233566789999999999


Q ss_pred             HHHHHHHH
Q 014936          400 RIKSFYQR  407 (415)
Q Consensus       400 ~l~~~~~~  407 (415)
                      +|++++++
T Consensus       419 al~~al~~  426 (427)
T d2gsaa_         419 AARTVMSA  426 (427)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHHh
Confidence            99998864

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=2.1e-18  Score=159.85  Aligned_cols=323  Identities=12%  Similarity=0.100  Sum_probs=202.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCC--CCCCCcEEEeCChHHHHHHHHHHhc---CCCC
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY--KLTPNDVFVTSGCTQAIDVAMALLS---RPGA  125 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~--~~~~~~i~i~~g~~~al~~~~~~l~---~~gd  125 (415)
                      .+.+++|++|+...    ....+.+  ...++-+.+.+.+++.++.  +.+++.|++|+|+|+++++++..+.   ++||
T Consensus        12 ~~v~~~V~~Am~~~----~~~hr~~--~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd   85 (382)
T d2bkwa1          12 IILSGAVQKALDVP----SLGHTSP--EFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNK   85 (382)
T ss_dssp             CCCCHHHHHTTSCC----CCCTTSH--HHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCC
T ss_pred             CCCCHHHHHHhCcc----cCCCCcH--HHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCC
Confidence            45678887766321    1212221  1223323333333333332  2456789999999999999999986   5799


Q ss_pred             EEEEcCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcC-CCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936          126 NILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETA  202 (415)
Q Consensus       126 ~vi~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~  202 (415)
                      +|++....++..  ...++..|..+..+...+ .+...+.+.+++.+. .+++.+++++.+|.||...+.+.+.+++. +
T Consensus        86 ~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~~~-~  163 (382)
T d2bkwa1          86 NVLVVSTGTFSDRFADCLRSYGAQVDVVRPLK-IGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIK-Q  163 (382)
T ss_dssp             EEEEECSSHHHHHHHHHHHHTTCEEEEECCSS-TTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHH-H
T ss_pred             ceEEEEechhhhhhhhhccccccccccccccC-CCCccchhHHHHHhhhccchheeeeeccccccccccchhhhhhcc-c
Confidence            999998877653  345667788877665433 334467787776654 46788899999999999977665555433 3


Q ss_pred             hhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCcccc-CCCCceEEEEEeeCCCCCCChHHHHHHHHh----
Q 014936          203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKK----  277 (415)
Q Consensus       203 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~----  277 (415)
                      +.+++++++|.+++.    |..+..+..++.+   +++.|.+|++ +.+|  +|+++.++        +..+.+..    
T Consensus       164 ~~~~~~~~vDa~qs~----g~~pid~~~~giD---~~~~s~~K~l~gP~G--~g~l~vs~--------~~~~~~~~~~~~  226 (382)
T d2bkwa1         164 TSPETFFVVDAVCSI----GCEEFEFDEWGVD---FALTASQKAIGAPAG--LSISLCSS--------RFMDYALNDSKN  226 (382)
T ss_dssp             HCTTSEEEEECTTTT----TTSCCCTTTTTCS---EEEEESSSTTCCCSC--EEEEEECH--------HHHHHHTCHHHH
T ss_pred             cccceeeeeeccccc----ccccccccccCee---EEeecccccCcCCCc--hhhhhccH--------HHHhhhhhcccC
Confidence            345699999999998    4444455555554   7788899997 5577  88888864        23222211    


Q ss_pred             -------------------h----ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC-
Q 014936          278 -------------------Y----FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH-  333 (415)
Q Consensus       278 -------------------~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-  333 (415)
                                         .    .....+++.....++..+|+...++..+...++.+++++.+.+.+...+++..+. 
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~  306 (382)
T d2bkwa1         227 GHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSR  306 (382)
T ss_dssp             CCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSC
T ss_pred             CCcccchhhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhccccccccc
Confidence                               0    1123466766777777777654445567777778888888888887643433111 


Q ss_pred             CCCC---ceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCC-CCeEEEE-ee--CChhhHHHHHHHHHHHHH
Q 014936          334 KPEG---SMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGL-KNWLRVT-FA--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       334 ~p~~---g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~iRi~-~~--~~~~~l~~~l~~l~~~~~  406 (415)
                      .+..   ...+.+.++        +..++.. +|+++||.+.+|..... .+.|||+ ++  .++++++.+++.|..+..
T Consensus       307 ~~~~~~s~~v~~~~~~--------~~~~~~~-~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~  377 (382)
T d2bkwa1         307 YPSNMSAHGLTAVYVA--------DPPDVIA-FLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKL  377 (382)
T ss_dssp             SSSTTBCSSCEEEECS--------CHHHHHH-HHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHH
T ss_pred             CchhccCCcEEEEcCC--------CHHHHHH-HHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH
Confidence            1211   112334443        3555544 55789999998865322 5789999 44  345666666666654443


Q ss_pred             H
Q 014936          407 R  407 (415)
Q Consensus       407 ~  407 (415)
                      .
T Consensus       378 ~  378 (382)
T d2bkwa1         378 A  378 (382)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.82  E-value=5.5e-19  Score=163.52  Aligned_cols=319  Identities=13%  Similarity=0.143  Sum_probs=205.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLSRPGANI  127 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~i~~g~~~al~~~~~~l~~~gd~v  127 (415)
                      .+.+++|++|+...    ....++.  ..-+.++|+.+++++      +.+ ...|++++|+|+++++++..+..+|+++
T Consensus        27 ~~v~~~Vl~am~~~----~~~hr~~ef~~i~~~~r~~l~~ll------~~~~~~~i~~~g~gT~~~~~~~~~~~~~~~~~   96 (377)
T d1vjoa_          27 SNAHPSVLQAMNVS----PVGHLDPAFLALMDEIQSLLRYVW------QTENPLTIAVSGTGTAAMEATIANAVEPGDVV   96 (377)
T ss_dssp             CCCCHHHHHHHSSC----CCCTTSHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhCcC----CCCCCCHHHHHHHHHHHHHHHHHh------CCCCCeEEEEcCcHHHHHHHHHHhcccccccc
Confidence            55678888776432    1212221  123567777777777      333 3477788889999999999999999999


Q ss_pred             EEcCCCCcch--HHHHHhCCCeEEEeeccCCCCCCCChhHHHh-hcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          128 LLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       128 i~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      ++....+...  ...+...+.....+......  ..+.+..+. ..+.+++.+.+++.+|.||...+   +++|+++|++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---i~~i~~~~~~  171 (377)
T d1vjoa_          97 LIGVAGYFGNRLVDMAGRYGADVRTISKPWGE--VFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCRE  171 (377)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCTTC--CCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             ceeeechhhhhhhhhhhhhcccccccccCCCC--cccchhhhhhhhcCcceeeeeeeeeccceeeec---hhhhhhhhhh
Confidence            9888777643  33455566666666543322  244444443 34457888899999999999955   7778888889


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh------
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------  278 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------  278 (415)
                      +|..+++|.+++..    .....+..++.+   +++.|.+|.++.|+ .+|++...+        ...+.....      
T Consensus       172 ~g~~~~vDa~~~~g----~~~~~~~~~~~d---~~~~s~~K~~~gp~-g~~~~~~~~--------~~~~~~~~~~~~~~~  235 (377)
T d1vjoa_         172 FGTLLLVDTVTSLG----GVPIFLDAWGVD---LAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVAN  235 (377)
T ss_dssp             HTCEEEEECTTTTT----TSCCCTTTTTCS---EEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred             ccceEEEecchhhh----hhhhcccccccc---eeeecccccccCCC-EEEEecchh--------hHHhhhhccCCCCcc
Confidence            99999999999873    333344444443   77888899864433 255555533        233222111      


Q ss_pred             ---------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC--CceEE
Q 014936          279 ---------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE--GSMAV  341 (415)
Q Consensus       279 ---------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~  341 (415)
                                     .....+++.....++..+.........+...++.+++..++.+.+... ++..+..+.  ....+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~rs~~v~  314 (377)
T d1vjoa_         236 WYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLT  314 (377)
T ss_dssp             STTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEE
T ss_pred             eeeccchhhhccCcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhcc-CceeecChHhcCCeEE
Confidence                           111223333343444444332223456777788888888888888876 444232221  12233


Q ss_pred             EEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe-e--CChhhHHHHHHHHHHHHH
Q 014936          342 MLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF-A--VDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       342 ~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~-~--~~~~~l~~~l~~l~~~~~  406 (415)
                      .+.+++.     .+..++...+++++||.+..|..+...+.|||++ +  .+.|+++++++.|+++++
T Consensus       315 ~~~~p~~-----~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         315 TVCIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             EEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             EEECCCC-----CCHHHHHHHHHhcCCEEEecCcccccCCEEEEecCcCCCCHHHHHHHHHHHHHHhC
Confidence            4445431     2678888888888999999888765578899995 4  468899999999998763

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=4e-18  Score=159.09  Aligned_cols=342  Identities=15%  Similarity=0.060  Sum_probs=214.1

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++||..|.-...  ++ .+|.+.+++++++....+..+.. ...+ -...+++.+....  +...+.++++++++
T Consensus        40 ~dG~~ylD~~~g~~~~~--lGh~~p~i~~Ai~~q~~~~~~~~~~~-~~~~-~~~~l~~~l~~~~--~~~~~~v~f~~sGs  113 (429)
T d1s0aa_          40 SDGRRLVDGMSSWWAAI--HGYNHPQLNAAMKSQIDAMSHVMFGG-ITHA-PAIELCRKLVAMT--PQPLECVFLADSGS  113 (429)
T ss_dssp             TTSCEEEESSTTTTTCT--TCBSCHHHHHHHHHHHHHCSCCCCSS-EECH-HHHHHHHHHHHHS--CTTCCEEEEESSHH
T ss_pred             CCCCEEEECcccHHHHh--hcCCcHHHHHHHHHHHHhcCCcccCC-ccch-HHHHHHHHHHhhh--ccCcceeeeccccc
Confidence            35888999988753322  33 47999999999887643322221 1112 2233333333222  23457899999999


Q ss_pred             HHHHHHHHHhc-------CCCCEEEEcCCCCcchHHHHHhCCC--------------eEEEeeccCC-CC---CCCChhH
Q 014936          111 QAIDVAMALLS-------RPGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPD-KG---WEVDLDD  165 (415)
Q Consensus       111 ~al~~~~~~l~-------~~gd~vi~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~-~~---~~~~~~~  165 (415)
                      +|++.+++...       .+..+|+....+|++....+.....              .....+.... ..   ...+++.
T Consensus       114 eA~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (429)
T d1s0aa_         114 VAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVG  193 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHH
T ss_pred             cchhhhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhh
Confidence            99999987753       2335899999988876544432211              1111111100 01   1123445


Q ss_pred             HHhhcC--CCceEEEecCC--CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEE
Q 014936          166 IESLAD--QNTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (415)
Q Consensus       166 l~~~~~--~~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~  240 (415)
                      +++.+.  ....+.++..|  ++..|. ..|.+.+++|.++|++||+++|.||++.++...|... ....++..+.++  
T Consensus       194 ~~~~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-~~~~~~v~PDi~--  270 (429)
T d1s0aa_         194 FARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDIL--  270 (429)
T ss_dssp             HHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE--
T ss_pred             hhhhhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhcccccccccccc-ccccceeccccc--
Confidence            544432  24556677777  355555 5789999999999999999999999999986665432 223333333334  


Q ss_pred             ccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhc------cccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHH
Q 014936          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF------DILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQ  314 (415)
Q Consensus       241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  314 (415)
                       +++|.++..+..+|.+++++        ++.+.+....      ..+++.++++.+++.+.|+...+   ++..++.++
T Consensus       271 -~~gK~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~~---~~~~~~~~~  338 (429)
T d1s0aa_         271 -CLGKALTGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQVAD  338 (429)
T ss_dssp             -EECGGGGTSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHH
T ss_pred             -ccccccccccccccchhhHH--------HHHhccCCCCCcceeecCCCCCCcccchhhhcccccccc---ccccchhhH
Confidence             46799766668999999865        6777665421      23567889999999888865321   234555566


Q ss_pred             HHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eC
Q 014936          315 SVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AV  389 (415)
Q Consensus       315 ~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~  389 (415)
                      .-+++.+.|+++   +.+. . ....|++.-+++..+     .....+...+ .++|+.+.|..     +.+|++.  ..
T Consensus       339 ~g~~l~~~L~~l~~~~~v~-~-vrg~Gl~~~~e~~~~-----~~~~~~~~~~-~~~Gl~~~~~g-----~~i~~~Ppl~i  405 (429)
T d1s0aa_         339 IEVQLREQLAPARDAEMVA-D-VRVLGAIGVVETTHP-----VNMAALQKFF-VEQGVWIRPFG-----KLIYLMPPYII  405 (429)
T ss_dssp             HHHHHHHHHGGGGGCTTEE-E-EEEETTEEEEEESSC-----BCHHHHHHHH-HHTTEECCCBT-----TEEEECCCTTC
T ss_pred             HHHHHHHHHHHhccCCceE-E-EeecccEEEEEecCc-----ccHHHHHHHH-HHCCcEEEecC-----CEEEEeCCcCC
Confidence            666666666554   3232 1 233466666666542     1345555555 56799987642     6899987  46


Q ss_pred             ChhhHHHHHHHHHHHHHH
Q 014936          390 DPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       390 ~~~~l~~~l~~l~~~~~~  407 (415)
                      ++++|++++++|.+++++
T Consensus       406 t~~eid~~~~~l~~al~e  423 (429)
T d1s0aa_         406 LPQQLQRLTAAVNRAVQD  423 (429)
T ss_dssp             CHHHHHHHHHHHHHHTSS
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            899999999999988754

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.81  E-value=3.7e-18  Score=161.05  Aligned_cols=338  Identities=9%  Similarity=0.017  Sum_probs=216.8

Q ss_pred             cHHHHHHH-HHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCC-------CCCcEEEeCChHHHHHHHHHHhcC---
Q 014936           54 THVATEAV-AEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-------TPNDVFVTSGCTQAIDVAMALLSR---  122 (415)
Q Consensus        54 ~~~~~~a~-~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~-------~~~~i~i~~g~~~al~~~~~~l~~---  122 (415)
                      ++.+...+ ...++. ....|...+...++++.+.+|+.+.+|++-       ....-++|+|||+++..++.+..+   
T Consensus        86 ~~~~l~~~~~~~~n~-n~~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~  164 (476)
T d1js3a_          86 YPAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVV  164 (476)
T ss_dssp             HHHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcc-cccchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHH
Confidence            34444433 334433 333444444568899999999999888752       223568999999999988866431   


Q ss_pred             -------CC---------CEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCC------ceEEEec
Q 014936          123 -------PG---------ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVII  180 (415)
Q Consensus       123 -------~g---------d~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~  180 (415)
                             .|         -.|++++-+|+++...+...|..+..++++  .++.+|+++|++.+++.      +.+|+.+
T Consensus       165 ~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~lGl~~~~v~~d--~~~~md~~~L~~~i~~~~~~g~~p~~Vvat  242 (476)
T d1js3a_         165 RRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVAT  242 (476)
T ss_dssp             HHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HhhcccccCcccccccCceEEEecccccHHHHHHHHhcCceEEEeccC--CCCCcCHHHHHHHHHHHHhcCCCcEEEeec
Confidence                   11         158899999999999999999999988875  45679999999988652      3456677


Q ss_pred             CCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcc-cccccCCCCCeEEEccCccccCCCCceEEEEEe
Q 014936          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (415)
Q Consensus       181 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~  259 (415)
                      .+++.+|.+   +++++|+++|++||+|+++|.+|+++..-..... .+..+... . -+..++||++. .....|.++.
T Consensus       243 aGtt~~G~i---Dpl~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~a-D-Sit~d~HK~l~-~P~~~g~~l~  316 (476)
T d1js3a_         243 LGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFA-D-SFNFNPHKWLL-VNFDCSAMWV  316 (476)
T ss_dssp             BSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGC-S-EEEECHHHHSS-CCSSCEEEEE
T ss_pred             CCCccceee---ccHHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCccc-c-eeeecCccccc-cCCcceeecc
Confidence            778999999   8899999999999999999999988764332222 22222221 1 34447899854 4445788877


Q ss_pred             eCCCCCC----ChHHHHHHHHhh-------cccc----CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhh
Q 014936          260 TDPCGMF----RKPKVVERMKKY-------FDIL----GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIK  324 (415)
Q Consensus       260 ~~~~~~~----~~~~~~~~~~~~-------~~~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~  324 (415)
                      +++....    ..+.+.......       ...+    .....+...+....+   ..+.+++..++..+.++++.+.|+
T Consensus       317 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~---G~~g~~~~i~~~~~lA~~l~~~l~  393 (476)
T d1js3a_         317 KRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY---GVKGLQAYIRKHVQLSHEFEAFVL  393 (476)
T ss_dssp             SCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHhcChhhhccccccccccccccccccccchhhHHHHHHHHHHHH---hHhHHHHHHHHHHHHHHHHHHHHh
Confidence            6522000    000000000000       0000    011122223333333   357888999999999999999999


Q ss_pred             cCCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee---CChhhHHHHHHHH
Q 014936          325 EIPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA---VDPYSLEECLDRI  401 (415)
Q Consensus       325 ~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~l~~~l~~l  401 (415)
                      +.|+++++..|. -..+.+++....    .-..++.+++.++..+.+.+... ....++|+++.   +++++++.+++.|
T Consensus       394 ~~~~fel~~~p~-l~iV~Fr~~~~d----~~n~~l~~~l~~~G~~~~s~t~~-~g~~~lR~~i~n~~Tt~~did~~~~~i  467 (476)
T d1js3a_         394 QDPRFEVCAEVT-LGLVCFRLKGSD----GLNEALLERINSARKIHLVPCRL-RGQFVLRFAICSRKVESGHVRLAWEHI  467 (476)
T ss_dssp             HCTTEEECSCCC-SSEEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEEE-TTEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred             cCCCeEEECCCc-eEEEEEEccCCh----HHHHHHHHHHHhcCCEEEeeeeE-CCEEEEEEEeCCCCCCHHHHHHHHHHH
Confidence            999998553444 444555664310    01345666665554455544321 12348999984   5678999999999


Q ss_pred             HHHHHHHH
Q 014936          402 KSFYQRHA  409 (415)
Q Consensus       402 ~~~~~~~~  409 (415)
                      ++..+++.
T Consensus       468 ~~~a~~ll  475 (476)
T d1js3a_         468 RGLAAELL  475 (476)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99988764

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.81  E-value=3.9e-19  Score=169.13  Aligned_cols=312  Identities=15%  Similarity=0.082  Sum_probs=193.1

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC-------EEEEcCCCCcchHHHHHhC
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA-------NILLPRPGFPIYELSAAFR  144 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd-------~vi~~~p~y~~~~~~~~~~  144 (415)
                      .|+...+..+|++.+++++        ..++++++++|++|+.+++++++++|+       .++...+.+..+.......
T Consensus        70 ~y~~~~~~~~le~~~a~l~--------g~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~~~~  141 (465)
T d1ax4a_          70 AYAGSRNYYDLKDKAKELF--------NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELN  141 (465)
T ss_dssp             CSSSCHHHHHHHHHHHHHH--------CCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHT
T ss_pred             hhccChHHHHHHHHHHHHH--------CCCEEEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhhHHHHHHc
Confidence            5777778889999999998        467999999999999999999975443       3455555555556666777


Q ss_pred             CCeEEEeecc--------CCCCCCCChhHHHhhcCC---C-ceEEEecCCCCcc-ccCCCHHHHHHHHHHHhhcCcEEEE
Q 014936          145 HIEVRHFDLL--------PDKGWEVDLDDIESLADQ---N-TVALVIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIA  211 (415)
Q Consensus       145 g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~---~-~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~  211 (415)
                      |.....+...        ....+.+|++++++++++   . +..+++..++|.. |.++|.+++++|.++|++||+++|+
T Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~  221 (465)
T d1ax4a_         142 GCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVM  221 (465)
T ss_dssp             TCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEE
Confidence            8877655321        123456899999988854   2 3344445556554 4668999999999999999999999


Q ss_pred             ccccCCcccC----------CCCcc----cccccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHh
Q 014936          212 DEVYGHLVFG----------DKPFV----PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK  277 (415)
Q Consensus       212 De~~~~~~~~----------~~~~~----~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~  277 (415)
                      |+++......          +....    .+..+.    .+...|.+|.  ..+++.|++++++..      .+......
T Consensus       222 D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----d~~s~s~~k~--~~~~~~g~l~~~~~~------~~~~~~~~  289 (465)
T d1ax4a_         222 DSARFCENAYFIKARDPKYKNATIKEVIFDMYKYA----DALTMSAKKD--PLLNIGGLVAIRDNE------EIFTLARQ  289 (465)
T ss_dssp             ECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGC----SEEEEETTST--TCCSSCEEEEESSCH------HHHHHHHH
T ss_pred             ECcchhhhhcccccccccccccchhhhcccccccc----ceeEeecccC--cccccceeEeecchH------HHHHhhhc
Confidence            9998643211          11000    011111    1444455565  556668888886522      22222221


Q ss_pred             h---cc---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEecCcccc-
Q 014936          278 Y---FD---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLKLNLSLL-  350 (415)
Q Consensus       278 ~---~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~~-  350 (415)
                      .   ..   ...........++...+...   ..+...++..++.+++.+.|++. ++.++ .+.++..++........ 
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~a~~~~~~e~---~~~~~~~~~~~~~~~l~~~L~~~-g~~~v-~~~~~~~~~~~~~~~~~~  364 (465)
T d1ax4a_         290 RCVPMEGFVTYGGLAGRDMAAMVQGLEEG---TEEEYLHYRIGQVKYLGDRLREA-GIPIQ-YPTGGHAVFVDCKKLVPQ  364 (465)
T ss_dssp             HHHHHTCSTTTTTCCHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHHHT-TCCBC-SSCCSSEEEEESTTTCTT
T ss_pred             cccccccCCCcchhhHHHHHHHhhhhHHh---hhHHHHHHHHHHHHHHHHHHHhh-cCccc-cCCCcceeeeehhhhcCC
Confidence            1   11   11222333333333333221   11234455556677888888887 66633 66667666654432111 


Q ss_pred             -C-CCCCHHHHHHHHHhhcCeEEEcCCC-------------CCCCCeEEEEee---CChhhHHHHHHHHHHHHHHH
Q 014936          351 -D-DIIDDIDFCFKLAKEESVIILPGTA-------------VGLKNWLRVTFA---VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       351 -~-~~~~~~~~~~~ll~~~gi~v~~g~~-------------~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~~  408 (415)
                       . .......+...++.+.||.......             +...+.+|+++.   .|+|+++..++.|++++++.
T Consensus       365 ~~~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~~~  440 (465)
T d1ax4a_         365 IPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF  440 (465)
T ss_dssp             SCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred             CccccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence             0 0112455667777788987653221             111457999873   58999999999999988754

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=1.6e-17  Score=151.19  Aligned_cols=213  Identities=16%  Similarity=0.120  Sum_probs=154.9

Q ss_pred             CcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH----hCCCeEEEeec
Q 014936           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL  153 (415)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~----~~g~~~~~~~~  153 (415)
                      ....|++.|++.-        ..+..+++++|.+|+.+++ .++.+||+|++....|++....+.    ..|.++..++ 
T Consensus        56 T~~~lE~~la~LE--------~~~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~-  125 (393)
T d1n8pa_          56 NRENLERAVAALE--------NAQYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN-  125 (393)
T ss_dssp             HHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES-
T ss_pred             HHHHHHHHHHHHh--------CCceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee-
Confidence            3456666666654        3567788888899997655 666889999999999998777664    4566666553 


Q ss_pred             cCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHh----hcCcEEEEccccCCcccCCCCccccc
Q 014936          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN----KLKTLVIADEVYGHLVFGDKPFVPMG  229 (415)
Q Consensus       154 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~----~~~~~li~De~~~~~~~~~~~~~~~~  229 (415)
                             .+.+++++++++++++|++-.|.||+..+.+   +++|+++|+    ++|+++|+|..++....    ..++ 
T Consensus       126 -------~~~~~~~~~i~~~t~lv~~EspsNP~l~v~D---i~~ia~~a~~~~~~~g~~lvVDnT~atP~~----~~Pl-  190 (393)
T d1n8pa_         126 -------DLLNDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYI----SNPL-  190 (393)
T ss_dssp             -------SHHHHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHH----CCGG-
T ss_pred             -------cchHHHHHHhhhhcceeEecCcchhhhhccc---hhhhhhhhhhhcccCCceEEEecCccCccc----CCch-
Confidence                   2567899999999999999999999999966   555555555    78999999999865321    1122 


Q ss_pred             ccCCCCCeEEEccCccccCCCC-ceEEEEEeeCCCCCCChHHHHHHHHhhc-cccCCchhHHHHHHHHhhCCCcHHHHHH
Q 014936          230 VFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQAAVPSILQQPDEVFFKK  307 (415)
Q Consensus       230 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~  307 (415)
                      .++.+   |++.|++|.++..| .-.|.++.++       .++.+.++... ......+|.....+..-|+.     +.-
T Consensus       191 ~~GAD---iVvhS~TKyi~GhsDv~~G~v~~~~-------~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~T-----l~l  255 (393)
T d1n8pa_         191 NFGAD---IVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LHL  255 (393)
T ss_dssp             GGTCS---EEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHH
T ss_pred             hhCCC---EEEEccccccCCCCccccceeeecc-------hhHHHHHHHHHhhcCCCCChHHHHHHHhCCcc-----hhh
Confidence            23444   89999999987655 4455555543       24666676653 34567788888888888887     778


Q ss_pred             HHHHHHHHHHHHHHHhhcC-CCCc
Q 014936          308 TLNLLKQSVDICYNKIKEI-PCIS  330 (415)
Q Consensus       308 ~~~~~~~~~~~l~~~l~~~-~~~~  330 (415)
                      +.++..++...+.+.|+.. |.+.
T Consensus       256 R~~~~~~nA~~lA~~L~~~~~~V~  279 (393)
T d1n8pa_         256 RVRQAALSANKIAEFLAADKENVV  279 (393)
T ss_dssp             HHHHHHHHHHHHHHHHTSCTTTEE
T ss_pred             HHHHHHHHHHHHHHHHHhccCcEE
Confidence            8888888999999999753 4443

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.80  E-value=1.9e-18  Score=160.54  Aligned_cols=319  Identities=12%  Similarity=0.105  Sum_probs=201.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCcHHHHHHHHHHHhhhCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEE
Q 014936           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANI  127 (415)
Q Consensus        51 ~~~~~~~~~a~~~~~~~~~~~~y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~i~~g~~~al~~~~~~l~~~gd~v  127 (415)
                      ...+++|++|+...    ....++.  ..-+.++|+.++++++      ++.. .|++++|+|.++++++..+..+|+++
T Consensus        26 ~~~~~~V~~Am~~~----~~~hr~~ef~~i~~~~r~~L~~ll~------~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~v   95 (388)
T d2ch1a1          26 SNCSKRVLTAMTNT----VLSNFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLLEEGDRV   95 (388)
T ss_dssp             CCCCHHHHHHTTSC----CCCTTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhCcC----CCCCCCHHHHHHHHHHHHHHHHHhC------CCCCeEEEEcCcHHHHHHHHHHHhccccccc
Confidence            44578888876332    2222221  1234567777777763      3444 56677889999999999999999999


Q ss_pred             EEcCCCCcchH--HHHHhCCCeEEEeeccCCCCCCCChhHHHhhc-CCCceEEEecCCCCccccCCCHHHHHHHHHHHhh
Q 014936          128 LLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (415)
Q Consensus       128 i~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~  204 (415)
                      ++....+.+..  ..++..+.....+...+.  ...+.+..++.. ..+++.+.+++.+|.||...+   +++|+++|++
T Consensus        96 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~---~~~i~~~~~~  170 (388)
T d2ch1a1          96 LIAVNGIWAERAVEMSERYGADVRTIEGPPD--RPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ  170 (388)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCTT--SCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             cccccccccccchhhhhhhcccccccccccc--cccchhhhhhhhccCCcceeeeeecccccccccc---hhhhcchhcc
Confidence            98887776543  446677877777765433  335666665544 346788999999999999966   5666677779


Q ss_pred             cCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCC-CCceEEEEEeeCCCCCCChHHHHHHHHhh-----
Q 014936          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKY-----  278 (415)
Q Consensus       205 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-----  278 (415)
                      +|..+++|.+++.+.    .+..+..++.+   +++.|..|.++. +|  +|+++.++        +..+.....     
T Consensus       171 ~~~~~~vD~~ss~g~----~pid~~~~~~d---~~~~s~~K~~~gp~G--~g~~~~~~--------~~~~~~~~~~~~~~  233 (388)
T d2ch1a1         171 HDCLLIVDAVASLCG----VPFYMDKWEID---AVYTGAQKVLGAPPG--ITPISISP--------KALDVIRNRRTKSK  233 (388)
T ss_dssp             TTCEEEEECTTTBTT----BCCCTTTTTCC---EEECCCC-CCCCCSS--CEEEEECH--------HHHHHHHTCSSCCS
T ss_pred             ccceeeeeeeecccc----cccchhccCce---EEEEccccccCCCCe--EEEEeccH--------HHHHhhhcccCccc
Confidence            999999999999733    33344444443   778888998643 45  56666543        222222110     


Q ss_pred             -------------------ccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC-CCC--C
Q 014936          279 -------------------FDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP-HKP--E  336 (415)
Q Consensus       279 -------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p--~  336 (415)
                                         .....+++.....++...++...........++.+.........+... ++... ..+  .
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r  312 (388)
T d2ch1a1         234 VFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHR  312 (388)
T ss_dssp             CGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGB
T ss_pred             cccccchhhhhhhcccccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhc-ccccccCCHHHh
Confidence                               011234444455555555543222333444444444444444444443 22211 111  1


Q ss_pred             CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEE-ee--CChhhHHHHHHHHHHHHHH
Q 014936          337 GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVT-FA--VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       337 ~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~-~~--~~~~~l~~~l~~l~~~~~~  407 (415)
                      ....+.+.+++.     .+..++...+++++||.+.+|..+...+.|||+ ++  .+.|+++.+++.|+++++.
T Consensus       313 s~~v~~~~~p~g-----~~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~  381 (388)
T d2ch1a1         313 LPTVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA  381 (388)
T ss_dssp             CTTEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEECCCC-----CCHHHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            222445566542     257788888888889999998766556789999 45  3689999999999999986

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.79  E-value=8.2e-18  Score=155.27  Aligned_cols=309  Identities=12%  Similarity=0.097  Sum_probs=198.7

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCcc
Q 014936           58 TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPI  136 (415)
Q Consensus        58 ~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l-~~~gd~vi~~~p~y~~  136 (415)
                      ++++.+.++.+.+...++.  ..++++.+++++        ..+..+.+++||+|+.++++++ .++||+|+++..+|..
T Consensus         4 ~~~~~~~l~~~~~~~~G~~--~~~fE~~~~~~~--------~~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a   73 (374)
T d1o69a_           4 LKYIEEVFKSNYIAPLGEF--VNRFEQSVKDYS--------KSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIA   73 (374)
T ss_dssp             HHHHHHHHHHTTTSCTTHH--HHHHHHHHHHHH--------CCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGG
T ss_pred             HHHHHHHHhcCCcCCCCHH--HHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHh
Confidence            4677888887665445653  689999999998        4568999999999999999998 6889999999999999


Q ss_pred             hHHHHHhCCCeEEEeeccCCCCCCCChh--HHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccc
Q 014936          137 YELSAAFRHIEVRHFDLLPDKGWEVDLD--DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV  214 (415)
Q Consensus       137 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~  214 (415)
                      ....+...|++++.+++++.. +..+.+  .++....++++++++++.   .|..   .++.+|.++|+++|++||+|.+
T Consensus        74 ~~~~~~~~g~~pv~~Di~~~~-~~~~~~~~~~~~~~~~~~~aii~~~~---~G~~---~d~~~i~~~~~~~~i~vIED~a  146 (374)
T d1o69a_          74 SVAPICYLKAKPVFIDCDETY-NIDVDLLKLAIKECEKKPKALILTHL---YGNA---AKMDEIVEICKENDIVLIEDAA  146 (374)
T ss_dssp             GTHHHHHTTCEEEEECBCTTS-SBCHHHHHHHHHHCSSCCCEEEEECG---GGCC---CCHHHHHHHHHHTTCEEEEECT
T ss_pred             hHHHHhhccceeEeccccccc-ccccccccccchhccccccccccccc---ccch---hhhHHHHHHhhccCcchhhhhh
Confidence            999999999999999987532 233333  344666778899988875   3555   4688888999999999999999


Q ss_pred             cCCcc-cCCCCcccccccCCCCCeEEEccCc--cccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc----------
Q 014936          215 YGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI----------  281 (415)
Q Consensus       215 ~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~----------  281 (415)
                      ++.+. +.+.   .+..++.    +.+.||+  |.+...|  .|.+++.+       +++.+.++.....          
T Consensus       147 ~a~g~~~~~~---~~G~~gd----~~~fSf~~~K~l~tge--GG~i~tnn-------~~~~~~~~~~~~~g~~~~~~~~~  210 (374)
T d1o69a_         147 EALGSFYKNK---ALGTFGE----FGVYSYNGNKIITTSG--GGMLIGKN-------KEKIEKARFYSTQARENCLHYEH  210 (374)
T ss_dssp             TCTTCEETTE---ETTSSSS----EEEEECCTTSSSCCSS--CEEEEESC-------HHHHHHHHHHTBTCCCSSSSCCC
T ss_pred             hhhcceECCe---ecCCCCc----eEEEeccCcccccccc--ceeehhhh-------HHHHHhhcccccccccccccccc
Confidence            99865 2232   2233332    5555665  8765544  47777754       3566666554321          


Q ss_pred             -----cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCC----Cc--eEEEEecCcccc
Q 014936          282 -----LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPE----GS--MAVMLKLNLSLL  350 (415)
Q Consensus       282 -----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g--~~~~~~l~~~~~  350 (415)
                           +...+.+..+.+..-|+.     +.+..++-++.++++.+.|.+...+. . .+.    ..  .+..+..+....
T Consensus       211 ~~~G~N~rm~ei~Aaig~~qL~~-----l~~~i~~r~~i~~~y~~~L~~~~~~~-~-~~~~~~s~~~~~~~~~~~~~~~~  283 (374)
T d1o69a_         211 LDYGYNYRLSNVLGAIGVAQMEV-----LEQRVLKKREIYEWYKEFLGEYFSFL-D-ELENSRSNRWLSTALINFDKNEL  283 (374)
T ss_dssp             SSCCCBCBCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHTTTEECC-C-CCTTEECCCSSEEEEESCCGGGS
T ss_pred             ccCCccccccchhhhhhHHHHhh-----hhhhcchhHHHHHHHHhhcccccccc-c-cccCCCCChhheeeeeccccccc
Confidence                 122344444444444543     45555566667777777787642221 1 111    11  122222111100


Q ss_pred             C-------------CCCCHHHHHHHHHhhcCeEEEcCCCCC-------C-------------CCeEEEEe--eCChhhHH
Q 014936          351 D-------------DIIDDIDFCFKLAKEESVIILPGTAVG-------L-------------KNWLRVTF--AVDPYSLE  395 (415)
Q Consensus       351 ~-------------~~~~~~~~~~~ll~~~gi~v~~g~~~~-------~-------------~~~iRi~~--~~~~~~l~  395 (415)
                      .             ......+.+...|+++||.+++...+-       .             ...+.+-+  ..++++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~  363 (374)
T d1o69a_         284 NACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVY  363 (374)
T ss_dssp             CCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred             cccccccccchhhccchhhHHHHHHHHHHCCCCEEEeCcchhhChhhhcCCCCCCHHHHHHHhCEEECcCCCCCCHHHHH
Confidence            0             000122333444577899887643210       0             12355544  36899999


Q ss_pred             HHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQ  406 (415)
Q Consensus       396 ~~l~~l~~~~~  406 (415)
                      ..++.|.++++
T Consensus       364 ~I~~~I~~~lk  374 (374)
T d1o69a_         364 EISKLILKSIK  374 (374)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHHC
Confidence            99999988763

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=3.7e-17  Score=147.07  Aligned_cols=338  Identities=12%  Similarity=0.054  Sum_probs=220.5

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCC---cHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAG---LPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g---~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      +..++|-...      ...++.+.+++...+.+....+|+.   ..|   ..++++...+...+.++  ....+|- ..+
T Consensus        26 ~~~i~LiaSE------N~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~--a~~anVq-p~S   96 (416)
T d1dfoa_          26 EEHIELIASE------NYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFG--ADYANVQ-PHS   96 (416)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECC-CSS
T ss_pred             HcCceEecCc------ccCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhC--CCcceee-ccc
Confidence            4568886665      4457889998887776432223332   122   23444333344443344  2222222 467


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-----HhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCC
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSA-----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINP  182 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p  182 (415)
                      |+.|+.+++.++++|||+|+..+..+.++...-     .....+...+++++  +..+|.+++++..+. ++++|+....
T Consensus        97 Gs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~--~~~IDyd~l~~~a~~~kPklIi~G~S  174 (416)
T d1dfoa_          97 GSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDA--TGHIDYADLEKQAKEHKPKMIIGGFS  174 (416)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCS--SSSBCHHHHHHHHHHHCCSEEEEECS
T ss_pred             CccHHHHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCC--ccCccHHHHHHHHHHhccceEEeccc
Confidence            788999999999999999999999988754422     22235666677654  335999999887654 6777776543


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccC-CCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      ..|-  .+   +.+++.++|++.|.++++|.+|..+... +.-+.|+.. . +   ++.+|++|+  ++|.|.|.+.+++
T Consensus       175 ~y~r--~~---d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~-a-D---vvt~tThKt--lrGPrggiI~~~~  242 (416)
T d1dfoa_         175 AYSG--VV---DWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPH-A-H---VVTTTTHKT--LAGPRGGLILAKG  242 (416)
T ss_dssp             SCCS--CC---CHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTT-S-S---EEEEESSST--TCCCSCEEEEESS
T ss_pred             cccc--cc---CHHHHHHHHHhcCceEEcchhhhhcceeccccCCcccc-c-c---eeeeehhhc--ccCCCceEEEecc
Confidence            3332  22   3677788888999999999999654433 333334332 2 2   788899999  5677889999864


Q ss_pred             CCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          262 PCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                      .     +.++.+++.......  +++.....++.+.++.+.....++...+++.++++.|.+.|.+. |+.++.......
T Consensus       243 ~-----~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~-G~~iv~ggTdnH  316 (416)
T d1dfoa_         243 G-----SEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLER-GYKVVSGGTDNH  316 (416)
T ss_dssp             C-----CHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSS
T ss_pred             c-----hHhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC-CcccccCCCCCc
Confidence            2     125777776654322  33333344444445544334567889999999999999999998 888554455667


Q ss_pred             EEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCC------CCCCeEEEEe------eCChhhHHHHHHHHHHHHH
Q 014936          340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAV------GLKNWLRVTF------AVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~------~~~~~iRi~~------~~~~~~l~~~l~~l~~~~~  406 (415)
                      .+++++....     -....+...|++.||.+.--..+      ..++.|||+.      +..++++++..+.|.++++
T Consensus       317 lvlvdl~~~~-----~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~  390 (416)
T d1dfoa_         317 LFLVDLVDKN-----LTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLD  390 (416)
T ss_dssp             EEEEECGGGT-----CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             eeEEEecccC-----CCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            8888885422     13345677778999998633222      2257899999      2467899999888888875

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.79  E-value=1.5e-18  Score=163.60  Aligned_cols=294  Identities=12%  Similarity=0.114  Sum_probs=187.5

Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCCeEEEeeccC-CCC
Q 014936           82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKG  158 (415)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~  158 (415)
                      +...+..++.+..|  .+.....+..|+++++.+++.+..  .+++.|+++...|+++...+...|+++..++..+ +..
T Consensus       114 ~~~~~~~~~~~~~g--~~~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~  191 (434)
T d2z67a1         114 LTNKILESFFKQLG--LNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDR  191 (434)
T ss_dssp             HHHHHHHHHHHHTT--CCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTE
T ss_pred             HHHHHHHHHHHhcC--CCcceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCc
Confidence            34444444444444  233355556667777777777664  3679999999999999999999999988886433 234


Q ss_pred             CCCChhHHHhhcCC-----CceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccC
Q 014936          159 WEVDLDDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFG  232 (415)
Q Consensus       159 ~~~~~~~l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~  232 (415)
                      +.+|+++|++++++     ++.+|+...|++++|.+   +++++|+++|+++|+++++|++|+.+. +...........+
T Consensus       192 ~~~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~---~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~~  268 (434)
T d2z67a1         192 VYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYR  268 (434)
T ss_dssp             EECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSC
T ss_pred             cCCCHHHHHHHHHhhhhcCCceEEEeccCcCCCccc---cCHHHHHHHHHHhCCeEEEeccchhhhhhccccccccccCC
Confidence            57899999998864     56778888999999999   668999999999999999999997533 1111111112222


Q ss_pred             CCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccccC-CchhHHHHHHHHhhCCCcHHHHHHHHHH
Q 014936          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQAAVPSILQQPDEVFFKKTLNL  311 (415)
Q Consensus       233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~  311 (415)
                      .+   +++.|++|.++.+ ...|++..++       ..+++++........ ..+.....+....+.   .+.++...++
T Consensus       269 ~D---~~~~s~hK~l~~~-~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~---~~g~~~~~~~  334 (434)
T d2z67a1         269 VD---AVVSSSDKNLLTP-IGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVSLLSMG---SKNYLELVKN  334 (434)
T ss_dssp             CS---EEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred             cc---eEEEcCccccccC-CCccccccCc-------HHHHHHHHhhcccccccchHHHHHHHHHHHH---HhcchhHHHH
Confidence            22   7788999986543 2346666654       256666666543222 222233333333332   3556677777


Q ss_pred             HHHHHHHHHHHhhcC---CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCC-------CC
Q 014936          312 LKQSVDICYNKIKEI---PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGT-------AV  377 (415)
Q Consensus       312 ~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~-------~~  377 (415)
                      ..++++++.+.|+++   .+.... .......+.+.++.       +..++...| .+.||...    +..       .+
T Consensus       335 ~~~~a~~l~~~L~~l~~~~g~~ll-~~~~~~~~~~~~~~-------~~~~l~~~L-~~~gI~g~~v~~~l~~~g~~~~~~  405 (434)
T d2z67a1         335 QKNSKKLLDELLNDLSKKTGGKFL-DVESPIASCISVNS-------DPVEIAAKL-YNLRVTGPRGIKKTDHFGNCYLGT  405 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCBC-CCCCSSEEEEECSS-------CHHHHHHHH-HHTTEESCEEECTTCHHHHTCSSC
T ss_pred             HHHHHHHHHHHHHHhhhhcCceec-CCCCCceeeeecCC-------CHHHHHHHH-HHcCCeeeehhhhccccCeeeecc
Confidence            777777777777653   244422 33333333333432       466666655 56688532    111       12


Q ss_pred             CCCCeEEEEee--CChhhHHHHHHHHHH
Q 014936          378 GLKNWLRVTFA--VDPYSLEECLDRIKS  403 (415)
Q Consensus       378 ~~~~~iRi~~~--~~~~~l~~~l~~l~~  403 (415)
                      ...+++|++++  .++|||+.++++|++
T Consensus       406 ~~~~~l~~~~s~~~T~edID~~i~~L~k  433 (434)
T d2z67a1         406 YTHDYIVMNAAIGVRTEDIVNSVSKLEK  433 (434)
T ss_dssp             CSCCEEEEECCTTCCHHHHHHHHHHHHT
T ss_pred             cCCCeEEEecCCCCCHHHHHHHHHHHhc
Confidence            23578999984  689999999999875

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.79  E-value=2.5e-17  Score=151.69  Aligned_cols=311  Identities=14%  Similarity=0.081  Sum_probs=207.5

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCC--CEEEEc
Q 014936           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPG--ANILLP  130 (415)
Q Consensus        54 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~g--d~vi~~  130 (415)
                      .++-++++.+.++.+.+. .++  -..++++++++++        ..++++++++||.|+.+++.++. ++|  |+|+++
T Consensus        11 ~~~~~~~v~~~l~~~~~~-~G~--~v~~fE~~~~~~~--------g~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p   79 (371)
T d2fnua1          11 DKEDKKAVLEVLNSKQLT-QGK--RSLLFEEALCEFL--------GVKHALVFNSATSALLTLYRNFSEFSADRNEIITT   79 (371)
T ss_dssp             CHHHHHHHHHHHTSSCCS-SSH--HHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred             CHHHHHHHHHHHcCCCcc-CCH--HHHHHHHHHHHHH--------CcCeEEEEecHHHHHHHHHHHhcccCCCCCeeecc
Confidence            355677888888876543 343  4689999999999        45689999999999999999985 334  589999


Q ss_pred             CCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936          131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI  210 (415)
Q Consensus       131 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  210 (415)
                      ..+|..........|++++.++++++.  .++.+++++.+.+++++|++++   ..|..   .++.+|.++|+++|+++|
T Consensus        80 ~~t~~a~~~ai~~~G~~pv~vDi~~~~--~~~~~~~~~~~~~~t~avi~vh---~~G~~---~~~~~i~~~~~~~~i~lI  151 (371)
T d2fnua1          80 PISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVD---YAGKS---VEVESVQKLCKKHSLSFL  151 (371)
T ss_dssp             SSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEEC---GGGCC---CCHHHHHHHHHHHTCEEE
T ss_pred             cccccccceeeeccCcccccccccccc--cccchhhhhhccchhhcccccc---ccccc---cccccccccccccchhhc
Confidence            999999999999999999999987654  3567888889999999998876   45666   457788888999999999


Q ss_pred             EccccCCccc-CCCCcccccccCCCCCeEEEccC--ccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhhccc------
Q 014936          211 ADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI------  281 (415)
Q Consensus       211 ~De~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~------  281 (415)
                      +|.+++.+.. .+..   ...++.    +.+.||  +|.+...+  .|.+++++       +++.+.++.....      
T Consensus       152 EDaaqa~Ga~~~~~~---~G~~g~----~~~~Sf~~~K~l~~g~--GG~i~t~~-------~~~~~~~~~~~~~g~~~~~  215 (371)
T d2fnua1         152 SDSSHALGSEYQNKK---VGGFAL----ASVFSFHAIKPITTAE--GGAVVTND-------SELHEKMKLFRSHGMLKKD  215 (371)
T ss_dssp             EECTTCTTCEETTEE---TTSSSS----EEEEECCTTSSSCCSS--CEEEEESC-------HHHHHHHHHHTBTTEEESS
T ss_pred             cchhhccCceecccc---CCcccc----cccccccccccccccc--ceEEEeec-------hhhhhhccccccccccccc
Confidence            9999998652 2221   222222    444455  68855443  57777755       3567766654321      


Q ss_pred             -----------cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC----CCceEEEEecC
Q 014936          282 -----------LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP----EGSMAVMLKLN  346 (415)
Q Consensus       282 -----------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----~~g~~~~~~l~  346 (415)
                                 +...+.+..+.+...|+.     +++..++-+++.+++.+.|...+++.....+    .....+.+.++
T Consensus       216 ~~~~~~~~~G~n~r~sel~Aaigl~qL~~-----l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~  290 (371)
T d2fnua1         216 FFEGEVKSIGHNFRLNEIQSALGLSQLKK-----APFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMH  290 (371)
T ss_dssp             SSCEEESSCCCBCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEEC
T ss_pred             ccccccccccccccccchhhhhhhhhhhh-----ccchhhhhhhhhhhhccccccccccccccccccccccccccccccc
Confidence                       122344444444445543     5666666777777888888887665422111    11122222333


Q ss_pred             ccccCCCCCHHHHHHHHHhhcCeEEEcCCCC-----------CC----------CCeEEEEe--eCChhhHHHHHHHHHH
Q 014936          347 LSLLDDIIDDIDFCFKLAKEESVIILPGTAV-----------GL----------KNWLRVTF--AVDPYSLEECLDRIKS  403 (415)
Q Consensus       347 ~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~-----------~~----------~~~iRi~~--~~~~~~l~~~l~~l~~  403 (415)
                      ....   ..-.++... |+++||.+.+.-.+           ..          ...+.+-+  ..++++++..++.|.+
T Consensus       291 ~~~~---~~r~~~~~~-L~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~  366 (371)
T d2fnua1         291 QKFF---TCKKLILES-LHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLK  366 (371)
T ss_dssp             GGGG---GGHHHHHHH-HHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred             ccch---hHHHHHHHH-HHHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHHH
Confidence            2110   112344454 57789988754321           00          13455544  3688999999999998


Q ss_pred             HHHHH
Q 014936          404 FYQRH  408 (415)
Q Consensus       404 ~~~~~  408 (415)
                      +++++
T Consensus       367 ~~~~~  371 (371)
T d2fnua1         367 TFESF  371 (371)
T ss_dssp             HHHHH
T ss_pred             HHHcC
Confidence            88764

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.79  E-value=1.4e-17  Score=149.03  Aligned_cols=336  Identities=13%  Similarity=0.075  Sum_probs=218.7

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g  108 (415)
                      +..++|-...      ...++.+.+++...+.+....+|+.      ..-..++++...+...+.++  ....+|- ..+
T Consensus        23 ~~~l~LiaSE------N~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~--a~~anVq-p~S   93 (405)
T d1kl1a_          23 HAKIELIASE------NFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFG--AEHANVQ-PHS   93 (405)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHC--CSEEECC-CSS
T ss_pred             HcCceEeccC------CcCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhC--CCcceee-ccC
Confidence            4568886665      4457889998888775432223332      22233444333344443344  2222222 445


Q ss_pred             hHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-----HHhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceEEEecCC
Q 014936          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELS-----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINP  182 (415)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p  182 (415)
                      |+.|+.+++.+|++|||+|+..++...++...     ......+...++++++ ++.+|.+++++..+. ++++|++..-
T Consensus        94 Gs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kPklIi~G~S  172 (405)
T d1kl1a_          94 GAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPE-THVIDYDDVREKARLHRPKLIVAAAS  172 (405)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHHCCSEEEECCS
T ss_pred             chHHHHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccchh-cccccHHHHHHHHHhhCcceEEeccc
Confidence            68888889999999999999998777664432     2223467777787754 457999999987754 5676666544


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      .+|.-     -+.+++.++|++.|.+++.|-+|..+. .++.-+.|+. .. +   ++.+|.+|+  ++|.|.|.+.+++
T Consensus       173 ~y~r~-----~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~-~a-D---vvt~tThKt--lrGPrgg~I~~~~  240 (405)
T d1kl1a_         173 AYPRI-----IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVP-YA-H---FVTTTTHKT--LRGPRGGMILCQE  240 (405)
T ss_dssp             SCCSC-----CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT-TC-S---EEEEESSST--TCCCSCEEEEECH
T ss_pred             ccccc-----cChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChhh-hh-h---heecccccc--ccCCCCceEEecc
Confidence            44332     237788888889999999999995544 4444444442 22 2   667899999  5677889998865


Q ss_pred             CCCCCChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCce
Q 014936          262 PCGMFRKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSM  339 (415)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~  339 (415)
                              ++.+++.......  +++.....++.+.++.+.....++...+++.++++.|.+.|.+. |+.++..-....
T Consensus       241 --------~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~-G~~vv~ggTd~H  311 (405)
T d1kl1a_         241 --------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNH  311 (405)
T ss_dssp             --------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSS
T ss_pred             --------hhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcC-CceeecCCCccc
Confidence                    6777776654322  33333333444444433223567888999999999999999988 888553445567


Q ss_pred             EEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCCC--CCCCCeEEEEe------eCChhhHHHHHHHHHHHHH
Q 014936          340 AVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGTA--VGLKNWLRVTF------AVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       340 ~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~--~~~~~~iRi~~------~~~~~~l~~~l~~l~~~~~  406 (415)
                      .+|+++....     .....+...|++.||.+.    |+..  ...++.|||+.      +..++++.+..+.|.++++
T Consensus       312 ~vlvdl~~~~-----~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~  385 (405)
T d1kl1a_         312 LLLVDLRPQQ-----LTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLK  385 (405)
T ss_dssp             EEEEECGGGT-----CCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred             eeeccccccC-----CcHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence            8888885422     133456677788999987    3321  12257899998      2467899999998888874

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.78  E-value=9.5e-18  Score=159.29  Aligned_cols=314  Identities=12%  Similarity=0.020  Sum_probs=177.8

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcE-EEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhC-CCeEEEe--e
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDV-FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR-HIEVRHF--D  152 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i-~i~~g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~~~~-g~~~~~~--~  152 (415)
                      .-+.++++.+|++++        .++. ++++|+++++.+++.+++++||+|+++..+|.+........ +..+...  +
T Consensus        66 ~~i~eae~~~A~~~g--------a~~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~  137 (462)
T d1c4ka2          66 GPAVAAEKHAARVYN--------ADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTN  137 (462)
T ss_dssp             THHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEE
T ss_pred             HHHHHHHHHHHHHhC--------CCeEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeecc
Confidence            346789999999983        3444 55666677888889999999999999999999987755443 4444333  3


Q ss_pred             ccCCCC------CCCChhH---------HHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCC
Q 014936          153 LLPDKG------WEVDLDD---------IESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH  217 (415)
Q Consensus       153 ~~~~~~------~~~~~~~---------l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~  217 (415)
                      +++...      ..++.+.         ++.+...+++.+++.+.+|-.|.+   .++++|+++|+++|+++++|++++.
T Consensus       138 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~---~dl~~I~~ia~~~g~~l~vD~A~~~  214 (462)
T d1c4ka2         138 RNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTI---YNAHEVVKRIGHLCDYIEFDSAWVG  214 (462)
T ss_dssp             ECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEE---ECHHHHHHHHGGGBSEEEEECTTCC
T ss_pred             cccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccch---hhHHHHHHHHHHcCCEEEEechhhc
Confidence            322111      1122222         233344566666666666778998   5588899999999999999999987


Q ss_pred             cccC-CCCcccccccCC-----CCCeEEEccCccccCCCCceEEEEEeeCCCCCC-----ChHHHHHHHHhhccccCCch
Q 014936          218 LVFG-DKPFVPMGVFGS-----TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF-----RKPKVVERMKKYFDILGDPA  286 (415)
Q Consensus       218 ~~~~-~~~~~~~~~~~~-----~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  286 (415)
                      .... +...........     ....+++.|+||+++.++  .|.++..+...+.     .+............ +..++
T Consensus       215 ~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~-t~sp~  291 (462)
T d1c4ka2         215 YEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFM-STSPF  291 (462)
T ss_dssp             GGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHS-CSSCC
T ss_pred             cccccCcCCcchhhccccccccCCccEEEEecCccccccc--ceEEEEeccccccccchhhhHHHHHHhhhhcc-cCCch
Confidence            5432 211111111111     112478899999976654  3545443322110     01111222111111 34444


Q ss_pred             hHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCC---------------------------CCC---
Q 014936          287 TFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPH---------------------------KPE---  336 (415)
Q Consensus       287 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~---------------------------~p~---  336 (415)
                      ......+..+.........++..++..++.+.+++.+.++++.....                           .|.   
T Consensus       292 ~~~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (462)
T d1c4ka2         292 YPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKW  371 (462)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTT
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchh
Confidence            44444443333222234456666777777777777776653321000                           000   


Q ss_pred             -------CceE------EEEecCccc-----cCC-CCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHH
Q 014936          337 -------GSMA------VMLKLNLSL-----LDD-IIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLE  395 (415)
Q Consensus       337 -------~g~~------~~~~l~~~~-----~~~-~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~  395 (415)
                             ...+      +.+..+...     ... ...... +...|+++||.+....    .+.||++++  .++++++
T Consensus       372 ~~~~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~-~~~~L~~~gI~~e~~~----~~~i~~~~s~~~T~edid  446 (462)
T d1c4ka2         372 HAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATI-VANYLRDHGIIPEKSD----LNSILFLMTPAETPAKMN  446 (462)
T ss_dssp             TCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHH-HHHHHHHTTCCCSEEC----SSEEEEECCTTCCHHHHH
T ss_pred             ccccccCccceecccceeEEecCCccccccchhhcCCcHHH-HHHHHHHcCCeeeccC----CCeEEEEecCCCCHHHHH
Confidence                   0001      111111100     000 012344 4455678899754322    468999994  6899999


Q ss_pred             HHHHHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQRHA  409 (415)
Q Consensus       396 ~~l~~l~~~~~~~~  409 (415)
                      .+++.|.++.+.+.
T Consensus       447 ~li~aL~ei~r~~~  460 (462)
T d1c4ka2         447 NLITQLLQLQRLIE  460 (462)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999877654

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.76  E-value=4.3e-17  Score=152.69  Aligned_cols=354  Identities=13%  Similarity=0.032  Sum_probs=208.5

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChH
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~  110 (415)
                      .+|+.++|+..|.-...  ++ .+|++.+|+++++....+....   ...+.+..+|+.+.+...  -..+.++++++|+
T Consensus        38 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~ai~~q~~~~~~~~~~---~~~~~~~~la~~L~~~~~--~~~~~v~f~~sGs  110 (431)
T d1zoda1          38 ADGRAILDFTSGQMSAV--LGHCHPEIVSVIGEYAGKLDHLFSE---MLSRPVVDLATRLANITP--PGLDRALLLSTGA  110 (431)
T ss_dssp             TTCCEEEETTHHHHTCT--TCBTCHHHHHHHHHHHHHCCCCCTT---CCCHHHHHHHHHHHHHSC--TTCCEEEEESCHH
T ss_pred             CCCCEEEEcccCHHhhh--hcCCCHHHHHHHHHHHhhccccccc---cccHHHHHHHHHHHHhCC--cccceeeeccccc
Confidence            45889999977641111  22 4799999999998864321111   112333445555544322  1357999999999


Q ss_pred             HHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHHhCCC------------eEEEeeccCCCC-------CCCCh---hHH
Q 014936          111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI------------EVRHFDLLPDKG-------WEVDL---DDI  166 (415)
Q Consensus       111 ~al~~~~~~l~--~~gd~vi~~~p~y~~~~~~~~~~g~------------~~~~~~~~~~~~-------~~~~~---~~l  166 (415)
                      +|++.+++...  ..-+.|+...-+|++....+...+.            ....++......       ...+.   +.+
T Consensus       111 eA~e~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (431)
T d1zoda1         111 ESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYA  190 (431)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHH
T ss_pred             chHHHHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHH
Confidence            99999999853  2236888889999887665543221            111121110000       00112   222


Q ss_pred             Hhhc---CCCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEc
Q 014936          167 ESLA---DQNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (415)
Q Consensus       167 ~~~~---~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (415)
                      ...+   .++..+.++..| ....|. .+|.+.+++|.++|++||+++|.||++.++...|.... ...++..+.++   
T Consensus       191 ~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~-~~~~gv~PDi~---  266 (431)
T d1zoda1         191 FDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFA-CQRDGVTPDIL---  266 (431)
T ss_dssp             HHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSST-HHHHTCCCSEE---
T ss_pred             HHHHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccc-cccCCCCcchh---
Confidence            2221   234567788888 333455 47889999999999999999999999998766654332 22233333334   


Q ss_pred             cCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh---ccccCCchhHHHHHHHHhhCCCcH-HHHHHHHHHHHHHHH
Q 014936          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQAAVPSILQQPDE-VFFKKTLNLLKQSVD  317 (415)
Q Consensus       242 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~  317 (415)
                      +++|. ...|+.++.+++.+        ++.+.....   ...+.+.++++..++.+.|+...+ +.+++..+.-+...+
T Consensus       267 ~~gK~-l~gG~p~~av~~~~--------~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~  337 (431)
T d1zoda1         267 TLSKT-LGAGLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRR  337 (431)
T ss_dssp             EECHH-HHTTSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             ccccc-cccccccceeeeee--------cchhhhhcccccccCCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhh
Confidence            46898 45678888888754        455544332   224567888888888887764322 333444344444455


Q ss_pred             HHHHHhhcCCCCcCCCCCCCceEEEEecCccc---cCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChh
Q 014936          318 ICYNKIKEIPCISCPHKPEGSMAVMLKLNLSL---LDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPY  392 (415)
Q Consensus       318 ~l~~~l~~~~~~~~~~~p~~g~~~~~~l~~~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~  392 (415)
                      .+.+.+.+.+.+. . ...-|.+.-+.+....   .+.......+...+ .++|+....-......+.||+++.  .+++
T Consensus       338 ~l~~~~~~~~~i~-~-vrG~Glm~~ie~~~~~~~~~~~~~~~~~i~~~~-~~~Gl~~~~~~~~~~~~~i~l~Ppl~it~~  414 (431)
T d1zoda1         338 GLLDLMERFDCIG-D-VRGRGLLLGVEIVKDRRTKEPADGLGAKITREC-MNLGLSMNIVQLPGMGGVFRIAPPLTVSED  414 (431)
T ss_dssp             HHHHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECTTHHHHHHHHH-HHTTEECCEECCTTSCCEEEECCCTTCCHH
T ss_pred             hhhhhhhcCCCeE-E-EeecceEEEEEEecCCcccCccHHHHHHHHHHH-HHhCcccCeeeecCCCCEEEEECCCCCCHH
Confidence            5555555554333 1 2334555545442211   00111134455555 566886422111223578999884  6899


Q ss_pred             hHHHHHHHHHHHHHHH
Q 014936          393 SLEECLDRIKSFYQRH  408 (415)
Q Consensus       393 ~l~~~l~~l~~~~~~~  408 (415)
                      ++++++++|.+++++.
T Consensus       415 eid~~~~~l~~al~~v  430 (431)
T d1zoda1         415 EIDLGLSLLGQAIERA  430 (431)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999999864

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.73  E-value=1.2e-15  Score=139.22  Aligned_cols=347  Identities=14%  Similarity=0.037  Sum_probs=223.2

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE-eC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TS  107 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i-~~  107 (415)
                      ...++|-...      ...++.+++++...+.+....+|+      -..-..+++....+...+.++..-+...+-+ ..
T Consensus        31 ~~~l~LIaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp~  104 (470)
T d1rv3a_          31 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY  104 (470)
T ss_dssp             HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             HcCceEecCC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhcccccccc
Confidence            4567877665      456788999888877643222222      2223445555554555555553222223322 45


Q ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----------HhCCCeEEEeeccCCCCCCCChhHHHhhcCC-CceE
Q 014936          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----------AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVA  176 (415)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~  176 (415)
                      +++.|+.+++.++++|||+|+..+....++...-          .....+...+++++++ +.+|.+++++..+. ++++
T Consensus       105 SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~~-~~IDyd~l~~~a~~~kPkl  183 (470)
T d1rv3a_         105 SGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDT-GYIDYDRLEENARLFHPKL  183 (470)
T ss_dssp             SHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTT-CSBCHHHHHHHHHHHCCSE
T ss_pred             CCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEeccc-CcccHHHHHHHHHhhCcce
Confidence            6788999999999999999999887766543321          1123567778877643 46999999987654 6777


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  255 (415)
                      |++..-.+|-  .   -+.+++.++|++.|.+++.|-+|..+. .+|.-+.|+.. . +   |+.+|.+|+  ++|.|.|
T Consensus       184 Ii~G~S~y~r--~---~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~~-a-D---vvt~tTHKt--lrGPrgG  251 (470)
T d1rv3a_         184 IIAGTSCYSR--N---LDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEH-C-H---VVTTTTHKT--LRGCRAG  251 (470)
T ss_dssp             EEECCSSCCS--C---CCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGT-C-S---EEEEESSGG--GCCCSCE
T ss_pred             Eeechhhccc--c---CCHHHHHHHHhccCCeEEecchhhhhhccccccCChhhe-e-e---eeeeehhhh--ccCCcce
Confidence            6665444443  2   246777777889999999999996544 33444445432 2 2   778899999  5788889


Q ss_pred             EEEeeCCCCCC-------ChHHHHHHHHhhccc--cCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          256 WFVTTDPCGMF-------RKPKVVERMKKYFDI--LGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       256 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      .+.+++...-.       ...++.+++......  .+++.....++.+.++.+.....+....+++.++.+.|.+.|.+.
T Consensus       252 iI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~qvv~NAk~La~~L~~~  331 (470)
T d1rv3a_         252 MIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL  331 (470)
T ss_dssp             EEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99987531000       001367777665432  233333344444444443223457889999999999999999988


Q ss_pred             CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEE----cCCCC-CCCCeEEEEe------eCChhhHH
Q 014936          327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL----PGTAV-GLKNWLRVTF------AVDPYSLE  395 (415)
Q Consensus       327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~-~~~~~iRi~~------~~~~~~l~  395 (415)
                       |+.++........+++++....   . +. ..+...|++.||.+.    |+... ..++.|||+.      +..++++.
T Consensus       332 -G~~v~~ggTdnHlvlvdl~~~g---~-~g-~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTtrG~~e~dm~  405 (470)
T d1rv3a_         332 -GYKIVTGGSDNHLILVDLRSKG---T-DG-GRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQ  405 (470)
T ss_dssp             -TCEEGGGSCSSSEEEEEGGGGT---C-CH-HHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHH
T ss_pred             -CceeccCCCCCceEEEeecccC---C-cH-HHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHhCCCCHHHHH
Confidence             7775545566777888875422   1 33 446777789999885    44321 1257899998      24678999


Q ss_pred             HHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQ  406 (415)
Q Consensus       396 ~~l~~l~~~~~  406 (415)
                      +..+.|.++++
T Consensus       406 ~iA~~I~~~l~  416 (470)
T d1rv3a_         406 KVAHFIHRGIE  416 (470)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            98888888775

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=5.6e-17  Score=154.05  Aligned_cols=314  Identities=14%  Similarity=0.093  Sum_probs=186.9

Q ss_pred             CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCE---------EEEcCCCCcchHHHHH
Q 014936           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN---------ILLPRPGFPIYELSAA  142 (415)
Q Consensus        72 ~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~~~gd~---------vi~~~p~y~~~~~~~~  142 (415)
                      .|+......+|++.+++++        ..+.++++++|++|+.+++.+++++|+.         ++.....|........
T Consensus        69 ~Y~~~~~~~~le~~~a~l~--------G~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~  140 (467)
T d2v1pa1          69 AFSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQ  140 (467)
T ss_dssp             CSSSCHHHHHHHHHHHHHT--------CCSEEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHH
T ss_pred             hhcCCchHHHHHHHHHHHH--------CCCEEEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccHHHHH
Confidence            6877778899999999998        4678899999999999999998766554         4444444455556677


Q ss_pred             hCCCeEEEeeccCC--------CCCCCChhHHHhhcCC----CceEEEecCCCCc-cccCCCHHHHHHHHHHHhhcCcEE
Q 014936          143 FRHIEVRHFDLLPD--------KGWEVDLDDIESLADQ----NTVALVIINPGNP-CGNVYSYQHLQKLAETANKLKTLV  209 (415)
Q Consensus       143 ~~g~~~~~~~~~~~--------~~~~~~~~~l~~~~~~----~~~~v~i~~p~np-tG~~~~~~~l~~i~~~~~~~~~~l  209 (415)
                      ..|..+..++.+..        ....+|++++++.+++    .+.++++...+|. .|.+++.+++++|.++|++||+++
T Consensus       141 ~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l  220 (467)
T d2v1pa1         141 INGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPV  220 (467)
T ss_dssp             HTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCE
T ss_pred             HcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEE
Confidence            88999888775421        1245789999988753    3455666666664 467889999999999999999999


Q ss_pred             EEccccCCcc----------cCCCCcccc-cccCCCCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh
Q 014936          210 IADEVYGHLV----------FGDKPFVPM-GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (415)
Q Consensus       210 i~De~~~~~~----------~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~  278 (415)
                      |+|+++....          +.+.....+ ..+... ..++..|.+|.++.+  ..|++.+++.. ..   ......+..
T Consensus       221 ~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~d~~s~s~~K~~~~~--~gg~i~~~~~~-~~---~~~~~~~~~  293 (467)
T d2v1pa1         221 VMDSARFAENAYFIKQREAEYKDWTIEQITRETYKY-ADMLAMSAKKDAMVP--MGGLLCMKDDS-FF---DVYTECRTL  293 (467)
T ss_dssp             EEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGG-CSEEEEESSSTTCCS--SCEEEEECSGG-GH---HHHHHHHHH
T ss_pred             EEechhhhccccccccccccccCCcccccchhhccc-CCEEEecCCCCCCCC--CceeEEecchh-hh---hHHHhhccc
Confidence            9999986422          111111110 001111 125556788875443  35666655422 11   122222221


Q ss_pred             c---c---ccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceEEEEe----cCcc
Q 014936          279 F---D---ILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMAVMLK----LNLS  348 (415)
Q Consensus       279 ~---~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~----l~~~  348 (415)
                      .   .   ...........++...+....   ..+..++..++.+++.+.|.+. ++. + .+..+....+.    ++..
T Consensus       294 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~-v-~~~~~~~~~~~~~~~~~~~  367 (467)
T d2v1pa1         294 CVVQEGFPTYGGLEGGAMERLAVGLYDGM---NLDWLAYRIAQVQYLVDGLEEI-GVV-C-QQAGGHAAFVDAGKLLPHI  367 (467)
T ss_dssp             HHHTTSSCCCCCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHHHHHT-TCC-E-EEECSSCEEEEHHHHSTTS
T ss_pred             ccccccCcchhhhHHHHHHHHHHHhHHhh---hHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCccceeecchhhcCCc
Confidence            1   1   112223333333333332211   1234445556777788888776 443 2 22222222221    1111


Q ss_pred             ccCCCCCHHHHHHHHHhhcCeEEEcCCC-------------CCCCCeEEEEee---CChhhHHHHHHHHHHHHHH
Q 014936          349 LLDDIIDDIDFCFKLAKEESVIILPGTA-------------VGLKNWLRVTFA---VDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       349 ~~~~~~~~~~~~~~ll~~~gi~v~~g~~-------------~~~~~~iRi~~~---~~~~~l~~~l~~l~~~~~~  407 (415)
                      .... .........++.+.||.......             +.....+|+++.   .++|++|.+++.|++++++
T Consensus       368 ~~~~-~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l~~v~~~  441 (467)
T d2v1pa1         368 PADQ-FPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_dssp             CGGG-CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred             chhh-hhhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence            1111 12455667777888986532211             112467999883   4889999999999998864

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.72  E-value=1.9e-15  Score=137.52  Aligned_cols=347  Identities=14%  Similarity=0.038  Sum_probs=206.6

Q ss_pred             cceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCcHHHHHHHHHHHhhhCCCCCCCCcE-EEeC
Q 014936           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDV-FVTS  107 (415)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i-~i~~  107 (415)
                      ...++|-...      ...++.+++++...+.+....+||      -..-..+++....+...+.++.......+ +=..
T Consensus        27 ~~~l~LiaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~a~w~vNVqp~  100 (463)
T d2a7va1          27 CRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY  100 (463)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             hcCeeEeccC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCchhccCCcccc
Confidence            4457776665      456788999888877643222332      22334556555455555445533222112 2234


Q ss_pred             ChHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH--------HhCC--CeEEEeeccCCCCCCCChhHHHhhcCC-CceE
Q 014936          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--------AFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVA  176 (415)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vi~~~p~y~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~  176 (415)
                      +++.|+.+++.+|++|||+|+..++.+.++...-        ...|  .+...+.++++ +..+|.+++++..+. ++++
T Consensus       101 SGs~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~-~~~IDyd~~~~~a~~~kPkl  179 (463)
T d2a7va1         101 SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLFRPRL  179 (463)
T ss_dssp             SHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTT-TCSBCHHHHHHHHHHHCCSE
T ss_pred             ccHHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCC-CCcCcHHHHHHHHhhcCCce
Confidence            5788889999999999999998887776653221        1122  23444555543 346999999987654 6777


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcc-cCCCCcccccccCCCCCeEEEccCccccCCCCceEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G  255 (415)
                      |++....+|--.     +.+++.++|++.|.+++.|-+|..+. -++.-+.|+.. . +   |+.+|.+|+  ++|.|.|
T Consensus       180 Ii~G~S~y~r~~-----d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~~-a-D---vvt~tTHKT--lrGPrgG  247 (463)
T d2a7va1         180 IIAGTSAYARLI-----DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-A-D---IVTTTTHKT--LRGARSG  247 (463)
T ss_dssp             EEECCSSCCSCC-----CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGT-C-S---EEEEESSGG--GCSCSCE
T ss_pred             EEeccccccccc-----CHHHHHHHhhcccceEEechhhhhHHhhhhhhcChhhh-h-h---hhhchhhhh--hcCCCce
Confidence            666554444322     36777777789999999999995544 44444444432 2 2   778899999  6788889


Q ss_pred             EEEeeCCCCCC-------ChHHHHHHHHhhcccc--CCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcC
Q 014936          256 WFVTTDPCGMF-------RKPKVVERMKKYFDIL--GDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEI  326 (415)
Q Consensus       256 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~  326 (415)
                      .+.+++...-.       ...++.+++.......  +++.....++.+.++.+.....++...+++.++.+.|.+.|.+.
T Consensus       248 iIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~L~~~  327 (463)
T d2a7va1         248 LIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER  327 (463)
T ss_dssp             EEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhC
Confidence            99987531000       0003556666653322  33333333444444433223567889999999999999999988


Q ss_pred             CCCcCCCCCCCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCC-----CCCeEEEEe------eCChhhHH
Q 014936          327 PCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVG-----LKNWLRVTF------AVDPYSLE  395 (415)
Q Consensus       327 ~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-----~~~~iRi~~------~~~~~~l~  395 (415)
                       |+.++........+++++....     .....+...|++.||.+.--..++     .++.|||+.      +..++++.
T Consensus       328 -G~~vv~ggTdnHlvlvdl~~~~-----~~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG~~e~dm~  401 (463)
T d2a7va1         328 -GYSLVSGGTDNHLVLVDLRPKG-----LDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFR  401 (463)
T ss_dssp             -TCEEGGGSCSSSEEEEECTTTT-----CCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHH
T ss_pred             -CCeeecCCCCCceeeeeccccC-----CCHHHHHHHHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhCCCCHHHHH
Confidence             8885545566778888875421     133456667789999986333222     257899998      24678898


Q ss_pred             HHHHHHHHHHH
Q 014936          396 ECLDRIKSFYQ  406 (415)
Q Consensus       396 ~~l~~l~~~~~  406 (415)
                      +..+.|.+++.
T Consensus       402 ~iA~~I~~~l~  412 (463)
T d2a7va1         402 RVVDFIDEGVN  412 (463)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88888887765

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.71  E-value=1.5e-16  Score=149.89  Aligned_cols=339  Identities=11%  Similarity=0.039  Sum_probs=198.2

Q ss_pred             ccCcceeEecccCCCCCCCCC-CcHHHHHHHHHHHhcCC---CCCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 014936           32 KNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK---FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (415)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~---~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~  107 (415)
                      .+|+.++||..|.-...  ++ .+|++.+++.+++....   ...+.. .....+.+.+++.+....+  -.-+.+++++
T Consensus        50 ~dG~~ylD~~~g~~~~~--lGh~~p~v~~ai~~q~~~~~~~~~~~~~~-~~~~~~a~~lae~l~~~~~--~~~~~v~f~~  124 (461)
T d1ohwa_          50 VDGNRMLDLYSQISSIP--IGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMA  124 (461)
T ss_dssp             TTSCEEEESSHHHHTCS--SCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEES
T ss_pred             CCCCEEEEcccCHHHHh--hcCCcHHHHHHHHHHHhhhhhcccccccc-cchHHHHHHHHHHHHhhhc--cCcceeeeec
Confidence            35778999876642211  22 47889999988765321   111111 1223466777777654322  2456899999


Q ss_pred             ChHHHHHHHHHHhc----------------------------CCCCEEEEcCCCCcchHHHHHhCCCe------------
Q 014936          108 GCTQAIDVAMALLS----------------------------RPGANILLPRPGFPIYELSAAFRHIE------------  147 (415)
Q Consensus       108 g~~~al~~~~~~l~----------------------------~~gd~vi~~~p~y~~~~~~~~~~g~~------------  147 (415)
                      +|++|++.+++...                            .+...|+....+|++....+......            
T Consensus       125 sGseAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~  204 (461)
T d1ohwa_         125 CGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFD  204 (461)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCC
T ss_pred             chhhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccC
Confidence            99999999988652                            12347999999998765544332211            


Q ss_pred             EEEeeccCC-CCC-----------CCChhHHHhhc-----CCCceEEEecCC-CCcccc-CCCHHHHHHHHHHHhhcCcE
Q 014936          148 VRHFDLLPD-KGW-----------EVDLDDIESLA-----DQNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTL  208 (415)
Q Consensus       148 ~~~~~~~~~-~~~-----------~~~~~~l~~~~-----~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~  208 (415)
                      ....+.... ...           ..+.+.+++.+     .+...+.++..| +...|. ..|.+.+++|.++|++||++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gil  284 (461)
T d1ohwa_         205 WPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCA  284 (461)
T ss_dssp             CCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCE
T ss_pred             CcccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcc
Confidence            000110000 000           01233444433     234566677777 444554 57899999999999999999


Q ss_pred             EEEccccCCcccCCCCcccccccCC--CCCeEEEccCccccCCCCceEEEEEeeCCCCCCChHHHHHHHHhh-ccccCCc
Q 014936          209 VIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDP  285 (415)
Q Consensus       209 li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  285 (415)
                      +|.||++.++...|... ....++.  ...++   +++|.++  |   |+.....         ........ ...++..
T Consensus       285 lI~DEV~tG~gRtG~~~-~~e~~gi~~~PDiv---~~gK~l~--~---g~~~~~~---------~~~~~~~~~~~~T~~g  346 (461)
T d1ohwa_         285 FLVDEVQTGGGSTGKFW-AHEHWGLDDPADVM---TFSKKMM--T---GGFFHKE---------EFRPNAPYRIFNTWLG  346 (461)
T ss_dssp             EEEECTTTCSSTTSSSS-GGGGGCCSSCCSEE---EECGGGS--S---EEEEECG---------GGSCSSTTSSCCSCSS
T ss_pred             eeccccccccccccccc-cccccccccCchhh---hhhhccc--c---ccccccc---------cccccccccccccccc
Confidence            99999999987666432 2233322  12233   5689843  3   4444322         11111111 2235677


Q ss_pred             hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhc----CCCCcCCCCCCCceEEEEecCccccCCCCCHHHHHH
Q 014936          286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKE----IPCISCPHKPEGSMAVMLKLNLSLLDDIIDDIDFCF  361 (415)
Q Consensus       286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~  361 (415)
                      ++++..++.+.|+...+   ++..++.++.-+++.+.|++    .|.+. -.....|+++-++++...     ...++..
T Consensus       347 ~p~~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~i-~~vrG~Gl~~~ie~~~~~-----~~~~i~~  417 (461)
T d1ohwa_         347 DPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFI-SRVRGRGTFCSFDTPDES-----IRNKLIS  417 (461)
T ss_dssp             CHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTC-EEEEEETTEEEEECSSHH-----HHHHHHH
T ss_pred             ccccchhhcccchhhhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCce-EEeeeeeEEEEEEcCCHH-----HHHHHHH
Confidence            88888888888864321   12334444444444444443    44321 112344777777775421     1334555


Q ss_pred             HHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          362 KLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       362 ~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                      .+ .++|+.+.+..    ++.||+..  ..++++++.++++|.+++++
T Consensus       418 ~~-~~~Gll~~~~~----~~~ir~~PpL~it~~eid~~~~~l~~~l~e  460 (461)
T d1ohwa_         418 IA-RNKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILAD  460 (461)
T ss_dssp             HH-HHTTEECEEET----TTEEECCCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             HH-HHCCeEEeeCC----CCEEEEeCCcCCCHHHHHHHHHHHHHHHhc
Confidence            54 56799987743    47899987  46899999999999999875

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.66  E-value=2.7e-15  Score=137.52  Aligned_cols=335  Identities=11%  Similarity=0.010  Sum_probs=181.8

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC--CC---CC--C---CCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NG---YA--P---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~---y~--~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~i  105 (415)
                      ..+||+-|-      ...+++|++++.+.+.+...  ..   .+  .   ..-+.+.|+.|++++    +.+ +...|++
T Consensus         3 ~~~~F~pGP------~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~----~~~-~~~~i~~   71 (361)
T d2c0ra1           3 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALL----GNP-TGYKVLF   71 (361)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHT----TCC-SSEEEEE
T ss_pred             CCcccCCCC------cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHh----CCC-CCCEEEE
Confidence            457887663      56789999999887643100  00   00  1   012345566666665    321 2336777


Q ss_pred             eCCh-HHHHHHHHHHhcCCCCEEEEcCCCCc--chHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936          106 TSGC-TQAIDVAMALLSRPGANILLPRPGFP--IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (415)
Q Consensus       106 ~~g~-~~al~~~~~~l~~~gd~vi~~~p~y~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  182 (415)
                      ++|+ +.++.+++..+..+|+++++......  .+...++..|..+..+..+...  .++++.+++.+...+.    ++.
T Consensus        72 ~~gs~t~~~ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~v  145 (361)
T d2c0ra1          72 IQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEASN--YMTLPKLQEIQLQDNA----AYL  145 (361)
T ss_dssp             ESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGGT--TCSCCCGGGCCCCTTE----EEE
T ss_pred             ECCCchHHHHHHHhccccCCCceEEEeechhhhhhhhhhhhcCceeeeecccccc--ccchhhhhhhcccCcc----eEE
Confidence            7775 55567777778888888876654443  2455678889888887765433  3677778777665543    223


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  262 (415)
                      +|.||...+   +.+|.++|+++|+++++|.+++.    +..+..+..++     +.+.|.+|.++.+|.-..++.....
T Consensus       146 ~~~tg~~~~---~~~i~~~~~~~~al~~vDavss~----g~~~id~~~~d-----i~~~s~~k~~~~~~~~~~~~~~~~~  213 (361)
T d2c0ra1         146 HLTSNETIE---GAQFKAFPDTGSVPLIGDMSSDI----LSRPFDLNQFG-----LVYAGAQKNLGPSGVTVVIVREDLV  213 (361)
T ss_dssp             EEESEETTT---TEECSSCCCCTTSCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCSSCEEEEEEGGGS
T ss_pred             EEeccccee---cceEEEeeccCCceEEEEeeccc----cccccccccce-----eEEEecccccccccCcEEEEEhHHh
Confidence            467788755   45667789999999999999987    33333444332     5566789998777643333322110


Q ss_pred             C----CCCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcC-CCCCC-
Q 014936          263 C----GMFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISC-PHKPE-  336 (415)
Q Consensus       263 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~p~-  336 (415)
                      .    .......+.............+.+....+..................+.++.+..+............ ...+. 
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (361)
T d2c0ra1         214 AESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDS  293 (361)
T ss_dssp             SSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGG
T ss_pred             hhCccccccccccccccccccccccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcccccccCCChhh
Confidence            0    00000012221111111112222222211111111111122333444444444444444443212111 11111 


Q ss_pred             -CceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHHH
Q 014936          337 -GSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQR  407 (415)
Q Consensus       337 -~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~  407 (415)
                       ....+.+.++..     .+..+ +...|+++||.+..|..+  -+.|||++  ..+.||++.+++.|+++.++
T Consensus       294 rS~~~~~~~~~~~-----~~~~~-~~~~L~~~GI~~~~G~~~--~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~  359 (361)
T d2c0ra1         294 RSDMNITFRLASE-----ELEKE-FVKASEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRS  359 (361)
T ss_dssp             BCSSEEEEECSCH-----HHHHH-HHHHHHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEEECCCc-----ccHHH-HHHHHHHCCCEEecCCCc--CCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence             122344445431     12344 455668889998887432  24599999  35899999999999987654

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=1.9e-14  Score=131.47  Aligned_cols=335  Identities=10%  Similarity=-0.069  Sum_probs=183.7

Q ss_pred             eeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC-----C--C---CCCcHHHHHHHHHHHhhhCCCCCCC-CcEEE
Q 014936           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY-----A--P---TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFV  105 (415)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y-----~--~---~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~i  105 (415)
                      ++||+-|-      ...+++|++++.+.+.+......     +  .   ..-+.+.|+.|+++++      .+. +.|++
T Consensus         2 ~~nF~pGP------~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~------~~~~~~v~~   69 (360)
T d1bjna_           2 IFNFSSGP------AMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLN------VPSNYKVLF   69 (360)
T ss_dssp             CEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEE
T ss_pred             eEEeCCCC------cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhC------CCCCCEEEE
Confidence            57887663      55689999999997653210000     0  0   0124677888888873      333 36788


Q ss_pred             eCChHHHHH-HHHHHhcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCC
Q 014936          106 TSGCTQAID-VAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (415)
Q Consensus       106 ~~g~~~al~-~~~~~l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p  182 (415)
                      ++|++++.. ++...+..+++.+++....+..  +...++..|..+..+......  ..+.+.+++.+..+++++.+++.
T Consensus        70 ~~gs~t~~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~~~  147 (360)
T d1bjna_          70 CHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVD--GLRAVKPMREWQLSDNAAYMHYC  147 (360)
T ss_dssp             ESSHHHHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEEET--TEEEECCGGGCCCCSSCSCEEEC
T ss_pred             ECCchHHHHhhhhhcccccccccceecccchhhhhHHHHhhcCccceeeccccCC--CcchhhhhhhhccCCceeEEEec
Confidence            877655554 4444566777888777666654  344556666666555443222  24566677777778888888888


Q ss_pred             CCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeCC
Q 014936          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (415)
Q Consensus       183 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~  262 (415)
                      +|.||...+...   +  .++.+++.+++|.+.+...    .......+  +   +.+.|.+|.++.++.-.+++.....
T Consensus       148 ~~~t~~~~~~~~---i--~~~~~~~~v~vDa~~~~~~----~~vd~~~~--d---v~~~ss~k~~~~~~~~~~~~~~~~~  213 (360)
T d1bjna_         148 PNETIDGIAIDE---T--PDFGADVVVAADFSSTILS----RPIDVSRY--G---VIYAGAQKNIGPAGLTIVIVREDLL  213 (360)
T ss_dssp             SEETTTTEECCC---C--CCCCTTCCEEEECTTTTTS----SCCCGGGC--S---EEEEETTTTTSSTTCEEEEEEGGGC
T ss_pred             ccccccCccccc---e--ecccccceeeeeeeccccc----eeeeeccc--e---eEEEEcccccccCCCceeEeeehhh
Confidence            898988855433   3  3567789999999988633    22222222  2   6677888987665533333333211


Q ss_pred             CC----CCChHHHHHHHHhhccccCCchhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCC---
Q 014936          263 CG----MFRKPKVVERMKKYFDILGDPATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKP---  335 (415)
Q Consensus       263 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p---  335 (415)
                      ..    ......................+....+....+........+...++..+....+...+...........+   
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  293 (360)
T d1bjna_         214 GKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNR  293 (360)
T ss_dssp             SCCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEECCBCGGGB
T ss_pred             hhccccCCcchhhHHHHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccccccCCcccc
Confidence            10    00000111111222221222222222222222211111233444455555555555555544222211111   


Q ss_pred             CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEee--CChhhHHHHHHHHHHHHHHH
Q 014936          336 EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTFA--VDPYSLEECLDRIKSFYQRH  408 (415)
Q Consensus       336 ~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~~~~~  408 (415)
                      ..+ .+.+.++..     .+..++. ..|+++||.+..|...  -+.||+|+.  .+.|+++.+++.|+++.+++
T Consensus       294 s~~-v~~f~~~~~-----~~~~~~~-~~l~~~Gi~~~~G~~~--~g~~Ris~~~~~t~edV~~li~~l~e~~~~~  359 (360)
T d1bjna_         294 SRM-NVPFQLADS-----ALDKLFL-EESFAAGLHALKGHRV--VGGMRASIYNAMPLEGVKALTDFMVEFERRH  359 (360)
T ss_dssp             CSS-EEEEEESSG-----GGHHHHH-HHHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             cce-EEEEEcCCc-----ccHHHHH-HHHHHCCCEeecCCCc--cCeEEEEecCCCCHHHHHHHHHHHHHHHHHc
Confidence            123 333455532     1344554 4557889998877432  245999993  68999999999999876553

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.55  E-value=8.2e-14  Score=127.34  Aligned_cols=328  Identities=14%  Similarity=0.031  Sum_probs=171.1

Q ss_pred             ceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCC------C---CCCcHHHHHHHHHHHhhhCCCCCCCC-cEE
Q 014936           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYA------P---TAGLPLTRRAIAEYLSRDLPYKLTPN-DVF  104 (415)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~y~------~---~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~  104 (415)
                      .+.||+.|-      ...|++|.+++.+.+.+... ....      .   ..-+.+.|+.|+++++      ++.+ .|+
T Consensus         3 ~~~nF~pGP------~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~------~~~~~~i~   70 (360)
T d1w23a_           3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ------IPNDYQIL   70 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEE
T ss_pred             ceeEeCCCC------cCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhC------CCCCCEEE
Confidence            467888884      56689999999886543100 0000      0   0124668888888883      4444 678


Q ss_pred             EeCChHHHHHHHHH-HhcCCCCEEEEcCCCCcc--hHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecC
Q 014936          105 VTSGCTQAIDVAMA-LLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN  181 (415)
Q Consensus       105 i~~g~~~al~~~~~-~l~~~gd~vi~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~  181 (415)
                      +++|++++...+.. .+.++++.+++....+..  +...+...+..........  .....++.++......+    .++
T Consensus        71 ~~~gt~~~~~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~  144 (360)
T d1w23a_          71 FLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKA--NSYQSIPDFSEFQLNEN----DAY  144 (360)
T ss_dssp             EESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGG--GTSCSCCCGGGCCCCTT----EEE
T ss_pred             EeCCcHHHHHHHHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeecccc--ccccchhhhhhcccccc----cce
Confidence            88887766664444 455677888877766553  3344556666655554322  11234455555443332    223


Q ss_pred             CCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeEEEccCccccCCCCceEEEEEeeC
Q 014936          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (415)
Q Consensus       182 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  261 (415)
                      ..|.||...+   +.+|.++|+++|+++++|.+++.+.    ....+..++     +.+.+++|.++++|. .|+++...
T Consensus       145 ~~~~tg~~~~---~~~i~~~~~~~g~l~ivDavqs~g~----~~id~~~~~-----vd~~~~~~~k~~~~~-~~~~~~~~  211 (360)
T d1w23a_         145 LHITSNNTIY---GTQYQNFPEINHAPLIADMSSDILS----RPLKVNQFG-----MIYAGAQKNLGPSGV-TVVIVKKD  211 (360)
T ss_dssp             EEEESEETTT---TEECSSCCCCCSSCEEEECTTTTTS----SCCCGGGCS-----EEEEETTTTTSCTTC-EEEEEEHH
T ss_pred             eEecCCcccc---ceeeeeccccceeeEEeeccccccc----ccccccccc-----ceEEeeccccccCCc-ceeeEech
Confidence            3456788854   5677788999999999999999733    334444443     455566776555442 34443321


Q ss_pred             CC-----CCCChHHHHHHHHhhccccCCchhHHHH----HHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCC
Q 014936          262 PC-----GMFRKPKVVERMKKYFDILGDPATFIQA----AVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCP  332 (415)
Q Consensus       262 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  332 (415)
                      ..     ............... .....+......    ++..+++........   ++.+...............+...
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  287 (360)
T d1w23a_         212 LLNTKVEQVPTMLQYATHIKSD-SLYNTPPTFSIYMLRNVLDWIKDLGGAEAIA---KQNEEKAKIIYDTIDESNGFYVG  287 (360)
T ss_dssp             HHCSCCTTCCGGGCHHHHHHTT-TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHH---HHHHHHHHHHHHHHHTTTTSSEE
T ss_pred             hhhcccccCCcchhhhhhhhhh-hhcccccceeeechhHHHHHHhhhhhhHHHH---HHHHHHHHHHHHHHhhccccccc
Confidence            00     000000111111111 112222222222    222222222112222   22222333333333222111101


Q ss_pred             -CCC---CCceEEEEecCccccCCCCCHHHHHHHHHhhcCeEEEcCCCCCCCCeEEEEe--eCChhhHHHHHHHHHHHHH
Q 014936          333 -HKP---EGSMAVMLKLNLSLLDDIIDDIDFCFKLAKEESVIILPGTAVGLKNWLRVTF--AVDPYSLEECLDRIKSFYQ  406 (415)
Q Consensus       333 -~~p---~~g~~~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~l~~~l~~l~~~~~  406 (415)
                       ..+   ..+ .+.+.++..     .+..++.. .|.++||.+..|..+.  +.+|+|+  ..+.|+++++++.++++.+
T Consensus       288 ~~~~~~rS~~-vvsf~i~~~-----~~~~~~~~-~l~~~GI~~~~G~~~~--ggiRiS~~~~~t~e~V~~Li~~~~~~~~  358 (360)
T d1w23a_         288 HAEKGSRSLM-NVTFNLRNE-----ELNQQFLA-KAKEQGFVGLNGHRSV--GGCRASIYNAVPIDACIALRELMIQFKE  358 (360)
T ss_dssp             SSCGGGBCSS-EEEEECSSH-----HHHHHHHH-HHHHTTEESCBCCTTT--CSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCChhhccee-EEEEEcCCC-----ccHHHHHH-HHHHCCCeeeeCCCcc--CcEEEEeeCCCCHHHHHHHHHHHHHHHh
Confidence             111   122 344455431     12345554 5578899987775432  4699999  3589999999999888765


Q ss_pred             H
Q 014936          407 R  407 (415)
Q Consensus       407 ~  407 (415)
                      +
T Consensus       359 ~  359 (360)
T d1w23a_         359 N  359 (360)
T ss_dssp             H
T ss_pred             c
Confidence            3

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.37  E-value=1.3e-10  Score=106.26  Aligned_cols=297  Identities=15%  Similarity=0.134  Sum_probs=174.3

Q ss_pred             CCcHHHHHHHHHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHH----HHhCCCeEEEe
Q 014936           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELS----AAFRHIEVRHF  151 (415)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l~-~~gd~vi~~~p~y~~~~~~----~~~~g~~~~~~  151 (415)
                      .|..++--.+..++.+--  +.+.-+.-...|++.....++.+.. ...+++++..-+|+.+...    ++..|.+++.+
T Consensus       104 QG~Lq~l~e~q~~l~elt--Gmd~~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v  181 (437)
T d1wyua1         104 QGVLQATFEYQTMIAELA--GLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL  181 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHH--TSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhh--CCCccccCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEee
Confidence            343333333344443322  2343455556666666655554433 2346889999999766543    56789999998


Q ss_pred             eccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCccccccc
Q 014936          152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF  231 (415)
Q Consensus       152 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  231 (415)
                      +.+..   ..+.++    +++++.++++.+|+. .|..   +++++|++++++.|..++.|..-..  ..+  ..+...+
T Consensus       182 ~~~~~---~~~~~~----~~~~~Aavmi~~Pnt-~G~~---ed~~~i~~~~h~~G~l~~~~ad~~a--l~~--l~~Pg~~  246 (437)
T d1wyua1         182 PLEGG---RTPLPE----VGEEVGAVVVQNPNF-LGAL---EDLGPFAEAAHGAGALFVAVADPLS--LGV--LKPPGAY  246 (437)
T ss_dssp             CCBTT---BCCCCC----CCTTEEEEEEESSCT-TSBC---CCHHHHHHHHHHTTCEEEEECCTTG--GGT--BCCHHHH
T ss_pred             ecccc---cchhhh----hccceeEEEEccccc-cccc---cchHHHHHHhhhccceEEeeechhh--hhc--ccccccc
Confidence            86432   223222    566889999999965 7887   6789999999999998777644322  211  1223344


Q ss_pred             CCCCCeEEEccCccccCCC----CceEEEEEeeCCCC------CC-------Ch-------HHHHHHHHhhcccc--CCc
Q 014936          232 GSTVPILTLGSLSKRWIVP----GWRLGWFVTTDPCG------MF-------RK-------PKVVERMKKYFDIL--GDP  285 (415)
Q Consensus       232 ~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~------~~-------~~-------~~~~~~~~~~~~~~--~~~  285 (415)
                      +.+   |++++ +|.|+.|    |.-.|++.+.+.-.      +.       ++       ..--+.+++.....  .+.
T Consensus       247 GaD---i~~g~-~q~fg~p~g~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~  322 (437)
T d1wyua1         247 GAD---IAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTN  322 (437)
T ss_dssp             TCS---EEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSC
T ss_pred             ccc---eEeec-cceeccccCCCcCccccccccchhhccccccccccccccCCcccceeecccccccccccccccchhhH
Confidence            444   66666 5555432    44578888764210      00       00       00011222222111  222


Q ss_pred             hhHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE--EEEecCccccCCCCCHHHHHHHH
Q 014936          286 ATFIQAAVPSILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLNLSLLDDIIDDIDFCFKL  363 (415)
Q Consensus       286 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~--~~~~l~~~~~~~~~~~~~~~~~l  363 (415)
                      +.+....+..++.....+.+++..++...+++++.+.|.+++++. ...+. .+|  +.++++.       +..++.+++
T Consensus       323 q~l~a~~a~~Y~~~lG~~GL~~ia~~a~~~A~yl~~~L~~~~g~~-~~~~~-~~f~ef~v~~~~-------~~~~i~k~L  393 (437)
T d1wyua1         323 AQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVR-PFTPK-PFFNEFALALPK-------DPEAVRRAL  393 (437)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCE-ECSCS-SBCSEEEEECSS-------CHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHHHHHHhhhcCCee-ccCCC-CeeeEEEEECCC-------CHHHHHHHH
Confidence            333333344444444568899999999999999999999988887 32333 222  3334432       466666666


Q ss_pred             HhhcCeEEEc-CCCCCCCCeEEEEee--CChhhHHHHHHHHHHH
Q 014936          364 AKEESVIILP-GTAVGLKNWLRVTFA--VDPYSLEECLDRIKSF  404 (415)
Q Consensus       364 l~~~gi~v~~-g~~~~~~~~iRi~~~--~~~~~l~~~l~~l~~~  404 (415)
                       .++|+...- -.....++.+.+++.  .++++|+.+++.|+++
T Consensus       394 -~d~G~~~~~~~~~~~~~~~lli~~TE~~tkeeiD~~v~al~ei  436 (437)
T d1wyua1         394 -AERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEV  436 (437)
T ss_dssp             -HHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             -HhCCCCCCcccccCCCCCeEEEecCCCCCHHHHHHHHHHHHHh
Confidence             556885311 011223678999994  6889999999999876

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.15  E-value=1.9e-08  Score=93.01  Aligned_cols=351  Identities=13%  Similarity=0.068  Sum_probs=199.8

Q ss_pred             hhhHHHHHHHhhhcccccccCcceeEecccCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCC----cHHHHHHH
Q 014936           14 IITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAG----LPLTRRAI   86 (415)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g----~~~lr~~i   86 (415)
                      +.++...+..+..+..  ..+...+-++.+.      .-..|.+.+.+.+-.  ..++.|.|   ..|    +-++...|
T Consensus        46 E~El~r~~~~la~kN~--~~~~~~~~lG~~~------~hy~P~v~~~~~~~~--TaYTPYQPaEiSQG~LQalfEfQtmi  115 (471)
T d1wyub1          46 ELTLVRHYTGLSRRQV--GVDTTFYPLGSCT------MKYNPKLHEEAARLF--ADLHPYQDPRTAQGALRLMWELGEYL  115 (471)
T ss_dssp             HHHHHHHHHHHHTTCC--CTTTSCCCBTTTC------CCCCCHHHHHHHHTT--SSCCTTSCGGGCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCC--CccccccCCcccc------CccCcchhhhHHHHH--hccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            3445555554444331  0134455555443      112466767665422  13345554   122    33555666


Q ss_pred             HHHHhhhCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCC----CEEEEcCCCCc-chHHHHHhCCCeEEEeeccCCCC
Q 014936           87 AEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPG----ANILLPRPGFP-IYELSAAFRHIEVRHFDLLPDKG  158 (415)
Q Consensus        87 a~~~~~~~~~~~~~~~i~i~~g~~~al~~~~~~l---~~~g----d~vi~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~  158 (415)
                      ++..      +.+.-+.-...|+|..-..++.+.   .+.+    ..+++..+.+. .........+..++.++...  .
T Consensus       116 ~eLT------GMdvaNaS~yDGatA~aeA~~ma~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  187 (471)
T d1wyub1         116 KALT------GMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--E  187 (471)
T ss_dssp             HHHH------TCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--T
T ss_pred             HHHh------CCCccccccchHHHHHHHHHHHHHHHhhhcccccccccccCCcccccceeeeeecccceeecccccc--c
Confidence            6665      344444445566665544443332   2222    23444555554 44455566777777776543  3


Q ss_pred             CCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHHhhcCcEEEEccccCCcccCCCCcccccccCCCCCeE
Q 014936          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (415)
Q Consensus       159 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i  238 (415)
                      ...+.+.+......++.++++.+|++..+..   +..+++++++++.+..+++|-+.......-..+   .....+   +
T Consensus       188 ~~~~~~~~~~~~~~~~a~v~v~~p~~~g~~e---~~~~~~~~~~h~~g~~~~~~~~~~~~~~~l~~p---~~~g~d---i  258 (471)
T d1wyub1         188 GEVDLEALKRELGPHVAALMLTNPNTLGLFE---RRILEISRLCKEAGVQLYYDGANLNAIMGWARP---GDMGFD---V  258 (471)
T ss_dssp             SSBCHHHHHHHCSTTEEEEEECSSCTTSCCC---TTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCH---HHHTCS---E
T ss_pred             ccccchhhhhhhhccccceeeccCCCccccc---chhhhhHHHHHhccccccccccchhhhhhcccc---Cccccc---c
Confidence            4578899988888888899999999866665   567788888889888888776654433211111   112222   3


Q ss_pred             EEccCccccCC----CCceEEEEEeeCCCCCCChHHHHHHHH-------------------hhc-cccCCchhHHHHHHH
Q 014936          239 TLGSLSKRWIV----PGWRLGWFVTTDPCGMFRKPKVVERMK-------------------KYF-DILGDPATFIQAAVP  294 (415)
Q Consensus       239 ~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~-------------------~~~-~~~~~~~~~~~~a~~  294 (415)
                      ++...++.||.    +|.-+|++.+.+        ++.+.+-                   +.. ....+.+.+...++.
T Consensus       259 v~vg~~q~~G~P~~~GGP~~G~~a~~~--------~~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~  330 (471)
T d1wyub1         259 VHLNLHKTFTVPHGGGGPGSGPVGVKA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAW  330 (471)
T ss_dssp             EECCTTTTTCCCCTTSCCCCCCEEECG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHH
T ss_pred             cccccccccccccccccccccceeehh--------hhhccCCCceecCCCccccccCCCcccccchhhhhhhHHHHHHHH
Confidence            33445565543    345588888865        2333221                   000 011222333334444


Q ss_pred             HhhCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCCCceE--EEEecCccccCCCCCHHHHHHHHHhhcCeEEE
Q 014936          295 SILQQPDEVFFKKTLNLLKQSVDICYNKIKEIPCISCPHKPEGSMA--VMLKLNLSLLDDIIDDIDFCFKLAKEESVIIL  372 (415)
Q Consensus       295 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~--~~~~l~~~~~~~~~~~~~~~~~ll~~~gi~v~  372 (415)
                      .++.....+.+++..++..++..++.+.|+. +|++ +.. .+.+|  +.++++.+     .+..++.+.|+ ++|+.- 
T Consensus       331 vYlsllG~~GL~elA~~~~~~A~Yla~~L~~-~G~~-~~~-~~~ff~EFvv~~~~~-----~~~~~i~k~L~-~~G~~~-  400 (471)
T d1wyub1         331 AYIRTLGLEGLKKAAALAVLNARYLKELLKE-KGYR-VPY-DGPSMHEFVAQPPEG-----FRALDLAKGLL-ELGFHP-  400 (471)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCB-CSS-CSSCCSCEEEBCSTT-----CCHHHHHHHHH-HTTCCC-
T ss_pred             HHHHHhCchhHHHHHHHHHHHHHHHHHHHhh-cCce-ecc-CcceeeEEeecCCCC-----CCHHHHHHHHH-HcCCCC-
Confidence            4555455789999999999999999999976 4887 322 22222  33444421     14566777775 468853 


Q ss_pred             cCCCCC--CCCeEEEEe--eCChhhHHHHHHHHHHHHHHHH
Q 014936          373 PGTAVG--LKNWLRVTF--AVDPYSLEECLDRIKSFYQRHA  409 (415)
Q Consensus       373 ~g~~~~--~~~~iRi~~--~~~~~~l~~~l~~l~~~~~~~~  409 (415)
                      +...|.  .++.+-|++  ..++++||.+++.|++++++..
T Consensus       401 ~~~~~p~~~~~~llv~vTE~~tkedID~lv~aL~~i~~e~~  441 (471)
T d1wyub1         401 PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKKPK  441 (471)
T ss_dssp             CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTSCH
T ss_pred             CcccCcCCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHhhH
Confidence            222222  257888888  4789999999999999988654

>d1ofux_ c.37.1.22 (X:) Hypothetical protein PA3008 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Bacterial cell division inhibitor SulA
domain: Hypothetical protein PA3008
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.63  E-value=1.2  Score=31.24  Aligned_cols=104  Identities=12%  Similarity=-0.003  Sum_probs=65.1

Q ss_pred             cEEEeCChHHHHHHHHHHh---cCC--CCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceE
Q 014936          102 DVFVTSGCTQAIDVAMALL---SRP--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (415)
Q Consensus       102 ~i~i~~g~~~al~~~~~~l---~~~--gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (415)
                      ++.....+.+.+..++..+   ...  +.-|+..+|-|..+...+...|++...+-.....+..-.+..+|+.++..+..
T Consensus         6 el~~~~~~~~~l~LL~P~L~~l~~~~~~rwi~wI~Pp~~p~a~~L~~~Gi~~~rll~v~~~~~~d~lwa~EqaL~sg~~~   85 (119)
T d1ofux_           6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH   85 (119)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred             eecccCCcHHHHHHHHHHHHHHHhcCCCcEEEEEcCCCccCHHHHHHcCCCCCeEEEEeCCChHHHHHHHHHHHhcCCcc
Confidence            4555566666566555544   333  33477788888899999999998754333211111111355677888777777


Q ss_pred             EEecCCCCccccCCCHHHHHHHHHHHhhcCcEEE
Q 014936          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI  210 (415)
Q Consensus       177 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li  210 (415)
                      .++..+.+     ++...++++--.|++.+...+
T Consensus        86 aVl~w~~~-----l~~~~~RRLqlAA~~g~t~~~  114 (119)
T d1ofux_          86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQSL  114 (119)
T ss_dssp             EEEECCSS-----CCHHHHHHHHHHHHHHTCEEE
T ss_pred             EEEEcCCC-----CChHHHHHHHHHHHhcCCEEE
Confidence            77777643     556778888777777766544

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=81.38  E-value=1.2  Score=30.98  Aligned_cols=78  Identities=14%  Similarity=0.098  Sum_probs=56.3

Q ss_pred             CCCEEEEcCCCCcchHHHHHhCCCeEEEeeccCCCCCCCChhHHHhhcCCCceEEEecCCCCccccCCCHHHHHHHHHHH
Q 014936          123 PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA  202 (415)
Q Consensus       123 ~gd~vi~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~  202 (415)
                      +|..-+..-|-|....++.+..|.+...+-+++.    .-.+++.++++..-+.+++...+      .|..|+.++.+.+
T Consensus        41 kgG~~~~giPVf~sV~eAv~~~~~~~SvIfVPp~----~a~dA~~EAi~agI~~iV~ITEg------IP~~D~~~i~~~~  110 (119)
T d2nu7a1          41 KGGTTHLGLPVFNTVREAVAATGATASVIYVPAP----FCKDSILEAIDAGIKLIITITEG------IPTLDMLTVKVKL  110 (119)
T ss_dssp             CTTEEETTEEEESSHHHHHHHHCCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCCC------CCHHHHHHHHHHH
T ss_pred             CCCcccCCCchhhHHHHHHHHhCCCeEEEeccHH----HHHHHHHHHHHCCCCEEEEecCC------CCHHHHHHHHHHH
Confidence            3445556678899999988888887665555432    34666777777777777766655      3448899999999


Q ss_pred             hhcCcEEE
Q 014936          203 NKLKTLVI  210 (415)
Q Consensus       203 ~~~~~~li  210 (415)
                      ++++..+|
T Consensus       111 ~~~~~~li  118 (119)
T d2nu7a1         111 DEAGVRMI  118 (119)
T ss_dssp             HHHTCEEE
T ss_pred             hhCCCEEe
Confidence            99998775