Citrus Sinensis ID: 014952

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----

MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVCYI

ccccccccccEEEcccccccccccccHHHHHHHHHcccccccEEEEcccccEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEcccccccHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccEEEEEcccccccccHHHHHHccccccccccccccccEEEEEcccccccccccEEEccHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHccccEEcccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccccEEEEEcccccccHHHHccccccccccccccccccccccccEEEEEcccccccccccccccEEEEcccccHHccccHHHHHHHHHHcc

cccHHHHHHHHEEcccccccccccccHHHHHHHHHHHccccEEEEEcccccEEEHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHcccEEEEEHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHccccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHHHcccccccccccEEEEEccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHcccEEEcccHHHHHHHHHcccccccccHHHHHHEcccccccHHHHHHHHHHccccEEEccccccccccEEEEEcccccccccccccccccEccccEEEEEcccccccccccccEEEEEccccHEEcccccccccHcHHEEcc

MEAKQDHQEFIfrsklpdiyipnhlplhtYCFEnisqfadrpciingptgdvytyADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGAsyigatsttanpfytppeIAKQAIASKAKIIITQAVYNdkvrdlsehhgarivtidpppenclhfSELITqadeneipavkinpddvvalpyssgttglpkgvmlTHKGLVTSVAQqvdgenpnlylhkedvILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKvtvapfvpPIVLAVAksgdvdkydmssIRTVmsgaapmgkELEDAVRAklphaklgqgygmteagPVLSMCLAFakepfeiksgacgtvvrnaemkivdpdtgislprnqageICIRGAQIMKGTYHIYAPFLLSIVCYI

MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGarivtidpppeNCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVtvapfvppIVLAVAksgdvdkyDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKivdpdtgislprnQAGEICIRGAQIMKGTYHIYAPFLLSIVCYI

MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEiakqaiaskakiiitqaVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVCYI

*********FIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIR********************LPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVCY*

***********FRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVCYI

********EFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIVCYI

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		415	2.2.26 [Sep-21-2011]
O24146		542	4-coumarate--CoA ligase 2	N/A	no	0.959	0.734	0.764	0.0
O24145		547	4-coumarate--CoA ligase 1	N/A	no	0.954	0.723	0.761	0.0
P31684		545	4-coumarate--CoA ligase 1	N/A	no	0.954	0.726	0.758	0.0
P31685		545	4-coumarate--CoA ligase 2	N/A	no	0.956	0.728	0.754	1e-180
P14912		544	4-coumarate--CoA ligase 1	N/A	no	0.942	0.718	0.75	1e-177
O24540		553	4-coumarate--CoA ligase O	N/A	no	0.951	0.714	0.740	1e-176
P14913		544	4-coumarate--CoA ligase 1	N/A	no	0.942	0.718	0.747	1e-176
Q42524		561	4-coumarate--CoA ligase 1	yes	no	0.959	0.709	0.706	1e-167
Q9S725		556	4-coumarate--CoA ligase 2	no	no	0.954	0.712	0.701	1e-165
P31687		562	4-coumarate--CoA ligase 2	no	no	0.927	0.685	0.678	1e-160

>sp\|O24146\|4CL2_TOBAC 4-coumarate--CoA ligase 2 OS=Nicotiana tabacum GN=4CL2 PE=2 SV=1	Back alignment and function desciption

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/399 (76%), Positives = 345/399 (86%), Gaps = 1/399 (0%)

Query: 1   MEAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVEL 60
           ME      + IFRSKLPDIYIPNHLPLH+YCFENIS+F+ RPC+ING    +YTYADVEL
Sbjct: 1   MEKDTKQVDIIFRSKLPDIYIPNHLPLHSYCFENISEFSSRPCLINGANKQIYTYADVEL 60

Query: 61  TSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQA 120
            SRKVAAGL K G+Q  D IM+LL N P+FVFAF+GASY+GA ST ANP +TP E+ KQA
Sbjct: 61  NSRKVAAGLHKQGIQPKDTIMILLPNSPEFVFAFIGASYLGAISTMANPLFTPAEVVKQA 120

Query: 121 IASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKIN 180
            AS AKII+TQA + +KV+D +  +  +I+ ID  PE CLHFS ++TQA+E++IP V+I 
Sbjct: 121 KASSAKIIVTQACHVNKVKDYAFENDVKIICIDSAPEGCLHFS-VLTQANEHDIPEVEIQ 179

Query: 181 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIY 240
           PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY+H EDV+LCVLPLFHIY
Sbjct: 180 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIHSEDVMLCVLPLFHIY 239

Query: 241 SLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDM 300
           SLNSVLLC LRVGAAILIMQKFDIV  +EL+Q+YKVT+ PFVPPIVLA+AKS  VD YD+
Sbjct: 240 SLNSVLLCGLRVGAAILIMQKFDIVSFLELIQRYKVTIGPFVPPIVLAIAKSPMVDDYDL 299

Query: 301 SSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGA 360
           SS+RTVMSGAAP+GKELED VRAK P+AKLGQGYGMTEAGPVL+MCLAFAKEPFEIKSGA
Sbjct: 300 SSVRTVMSGAAPLGKELEDTVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKSGA 359

Query: 361 CGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKG 399
           CGTVVRNAEMKIVDP TG SLPRNQ+GEICIRG QIMKG
Sbjct: 360 CGTVVRNAEMKIVDPKTGNSLPRNQSGEICIRGDQIMKG 398

Nicotiana tabacum (taxid: 4097)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 2

>sp\|O24145\|4CL1_TOBAC 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1	Back alignment and function description

>sp\|P31684\|4CL1_SOLTU 4-coumarate--CoA ligase 1 OS=Solanum tuberosum GN=4CL1 PE=3 SV=1	Back alignment and function description

>sp\|P31685\|4CL2_SOLTU 4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1	Back alignment and function description

>sp\|P14912\|4CL1_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL1 PE=2 SV=1	Back alignment and function description

>sp\|O24540\|4CL_VANPL 4-coumarate--CoA ligase OS=Vanilla planifolia GN=4CL PE=3 SV=1	Back alignment and function description

>sp\|P14913\|4CL2_PETCR 4-coumarate--CoA ligase 1 OS=Petroselinum crispum GN=4CL2 PE=2 SV=1	Back alignment and function description

>sp\|Q42524\|4CL1_ARATH 4-coumarate--CoA ligase 1 OS=Arabidopsis thaliana GN=4CL1 PE=1 SV=1	Back alignment and function description

>sp\|Q9S725\|4CL2_ARATH 4-coumarate--CoA ligase 2 OS=Arabidopsis thaliana GN=4CL2 PE=1 SV=2	Back alignment and function description

>sp\|P31687\|4CL2_SOYBN 4-coumarate--CoA ligase 2 OS=Glycine max PE=2 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		415
224126051		545	4-Coumarate:CoA ligase [Populus trichoca	0.959	0.730	0.835	0.0
2911799		557	4-coumarate:CoA ligase 1 [Populus tricho	0.959	0.714	0.832	0.0
379061391		545	4-coumarate: coenzyme A ligase 5 [Populu	0.959	0.730	0.832	0.0
255584945		557	AMP dependent CoA ligase, putative [Rici	0.944	0.703	0.834	0.0
408777391		544	4-coumarate:coenzyme A ligase [Punica gr	0.959	0.731	0.810	0.0
399630459		543	4-hydroxycinnamoyl-CoA ligase 3 [Coffea	0.959	0.732	0.807	0.0
224142261		540	4-Coumarate:CoA ligase [Populus trichoca	0.959	0.737	0.815	0.0
9651915		544	4-coumarate:coA ligase 2 [Rubus idaeus]	0.959	0.731	0.805	0.0
2911797		548	4-coumarate:CoA ligase 2 [Populus tricho	0.959	0.726	0.800	0.0
379061389		556	4-coumarate: coenzyme A ligase 4 [Populu	0.959	0.715	0.800	0.0

>gi\|224126051\|ref\|XP_002329649.1\| 4-Coumarate:CoA ligase [Populus trichocarpa] gi\|222870530\|gb\|EEF07661.1\| 4-Coumarate:CoA ligase [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/401 (83%), Positives = 372/401 (92%), Gaps = 3/401 (0%)

Query: 1   MEAKQDH-QEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVE 59
           MEA+ D  QEFIFRSKLPDI+IPNHLPLHTYCFEN+S+F D PC+INGPTG+++TYADVE
Sbjct: 1   MEAENDQAQEFIFRSKLPDIHIPNHLPLHTYCFENLSRFKDNPCLINGPTGEIHTYADVE 60

Query: 60  LTSRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQ 119
           LTSRKVA+GL+KLG+++GDVI+LLLQN P+FVFAFLGAS IGA STTANPFYTP E+AKQ
Sbjct: 61  LTSRKVASGLNKLGIKQGDVILLLLQNSPEFVFAFLGASIIGAISTTANPFYTPAEVAKQ 120

Query: 120 AIASKAKIIITQAVYNDKVRD-LSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVK 178
           A ASKAK+IITQAVY +KV+  + E+   +IVT+D PPEN LHFSEL T +DE++IPAV+
Sbjct: 121 ATASKAKLIITQAVYAEKVQQFVKENDHVKIVTVDSPPENYLHFSEL-TNSDEDDIPAVE 179

Query: 179 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFH 238
           INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY H++DVILCVLPLFH
Sbjct: 180 INPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHEKDVILCVLPLFH 239

Query: 239 IYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKY 298
           IYSLNSVLLC LRVG+AIL+MQKF+IV LMELVQKYKVT+APFVPP+VLAVAK   VDKY
Sbjct: 240 IYSLNSVLLCGLRVGSAILLMQKFEIVTLMELVQKYKVTIAPFVPPVVLAVAKCPVVDKY 299

Query: 299 DMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKS 358
           D+SSIRTVMSGAAPMGKELED VRAKLP+AKLGQGYGMTEAGPVLSMCLAFAKEPFEIKS
Sbjct: 300 DLSSIRTVMSGAAPMGKELEDTVRAKLPNAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKS 359

Query: 359 GACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKG 399
           GACGTVVRNAEMKIVDPDTG SLPRNQAGEICIRG+QIMKG
Sbjct: 360 GACGTVVRNAEMKIVDPDTGRSLPRNQAGEICIRGSQIMKG 400

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|2911799\|gb\|AAC39366.1\| 4-coumarate:CoA ligase 1 [Populus trichocarpa x Populus deltoides]	Back alignment and taxonomy information

>gi\|379061391\|gb\|AFC89541.1\| 4-coumarate: coenzyme A ligase 5 [Populus tomentosa]	Back alignment and taxonomy information

>gi\|255584945\|ref\|XP_002533186.1\| AMP dependent CoA ligase, putative [Ricinus communis] gi\|223527010\|gb\|EEF29200.1\| AMP dependent CoA ligase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|408777391\|gb\|AFU90743.1\| 4-coumarate:coenzyme A ligase [Punica granatum]	Back alignment and taxonomy information

>gi\|399630459\|gb\|AFP49810.1\| 4-hydroxycinnamoyl-CoA ligase 3 [Coffea arabica]	Back alignment and taxonomy information

>gi\|224142261\|ref\|XP_002324477.1\| 4-Coumarate:CoA ligase [Populus trichocarpa] gi\|222865911\|gb\|EEF03042.1\| 4-Coumarate:CoA ligase [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|9651915\|gb\|AAF91309.1\|AF239686_1 4-coumarate:coA ligase 2 [Rubus idaeus]	Back alignment and taxonomy information

>gi\|2911797\|gb\|AAC39365.1\| 4-coumarate:CoA ligase 2 [Populus trichocarpa x Populus deltoides]	Back alignment and taxonomy information

>gi\|379061389\|gb\|AFC89540.1\| 4-coumarate: coenzyme A ligase 4 [Populus tomentosa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		415
TAIR\|locus:2017602		561	4CL1 "4-coumarate:CoA ligase 1	0.956	0.707	0.679	1.7e-144
TAIR\|locus:2094716		556	4CL2 "4-coumarate:CoA ligase 2	0.954	0.712	0.674	1.6e-143
TAIR\|locus:2015003		561	4CL3 "4-coumarate:CoA ligase 3	0.932	0.689	0.627	4.2e-127
TAIR\|locus:2094771		570	4CL5 "4-coumarate:CoA ligase 5	0.951	0.692	0.559	3.7e-119
UNIPROTKB\|Q5LVA1		535	fadD "4-coumarate:CoA ligase"	0.908	0.704	0.340	9.9e-55
TIGR_CMR\|SPO_0801		535	SPO_0801 "4-coumarate:CoA liga	0.908	0.704	0.340	9.9e-55
TAIR\|locus:2115673		544	AT4G05160 [Arabidopsis thalian	0.942	0.718	0.339	4.9e-53
TAIR\|locus:2015499		542	ACOS5 "acyl-CoA synthetase 5"	0.951	0.728	0.300	8e-53
DICTYBASE\|DDB_G0284743		551	4cl3 "4-coumarate-CoA ligase"	0.922	0.695	0.337	1e-52
DICTYBASE\|DDB_G0284745		551	4cl2 "4-coumarate-CoA ligase"	0.927	0.698	0.317	3.7e-48

TAIR\|locus:2017602 4CL1 "4-coumarate:CoA ligase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1412 (502.1 bits), Expect = 1.7e-144, P = 1.7e-144
 Identities = 276/406 (67%), Positives = 320/406 (78%)

Query:     2 EAKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELT 61
             ++  ++ + IFRSKLPDIYIPNHL LH Y F+NIS+FA +PC+INGPTG VYTY+DV + 
Sbjct:    15 QSNNNNSDVIFRSKLPDIYIPNHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVI 74

Query:    62 SRKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEXXXXXX 121
             SR++AA   KLGV + DV+MLLL NCP+FV +FL AS+ GAT+T ANPF+TP E      
Sbjct:    75 SRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAK 134

Query:   122 XXXXXXXXXXXVYNDKVRDLSEHHGARIVTID-----PPPENCLHFSELI---TQADENE 173
                         Y DK++ L    G  IV ID     P PE CL F+EL    T+A E  
Sbjct:   135 ASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVPIPEGCLRFTELTQSTTEASE-V 193

Query:   174 IPAVKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCV 233
             I +V+I+PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY H +DVILCV
Sbjct:   194 IDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCV 253

Query:   234 LPLFHIYSLNSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSG 293
             LP+FHIY+LNS++LC LRVGAAILIM KF+I  L+EL+Q+ KVTVAP VPPIVLA+AKS 
Sbjct:   254 LPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSS 313

Query:   294 DVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEP 353
             + +KYD+SSIR V SGAAP+GKELEDAV AK P+AKLGQGYGMTEAGPVL+M L FAKEP
Sbjct:   314 ETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEP 373

Query:   354 FEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKG 399
             F +KSGACGTVVRNAEMKIVDPDTG SL RNQ GEICIRG QIMKG
Sbjct:   374 FPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKG 419

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0009411 "response to UV" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009620 "response to fungus" evidence=IEP

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA;TAS

GO:0016207 "4-coumarate-CoA ligase activity" evidence=IDA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

GO:0005737 "cytoplasm" evidence=IDA

TAIR\|locus:2094716 4CL2 "4-coumarate:CoA ligase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2015003 4CL3 "4-coumarate:CoA ligase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2094771 4CL5 "4-coumarate:CoA ligase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5LVA1 fadD "4-coumarate:CoA ligase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]	Back alignment and assigned GO terms

TIGR_CMR\|SPO_0801 SPO_0801 "4-coumarate:CoA ligase" [Ruegeria pomeroyi DSS-3 (taxid:246200)]	Back alignment and assigned GO terms

TAIR\|locus:2115673 AT4G05160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2015499 ACOS5 "acyl-CoA synthetase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0284743 4cl3 "4-coumarate-CoA ligase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0284745 4cl2 "4-coumarate-CoA ligase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P31684	4CL1_SOLTU	6, ., 2, ., 1, ., 1, 2	0.7587	0.9542	0.7266	N/A	no
P31685	4CL2_SOLTU	6, ., 2, ., 1, ., 1, 2	0.7543	0.9566	0.7284	N/A	no
P14913	4CL2_PETCR	6, ., 2, ., 1, ., 1, 2	0.7474	0.9421	0.7187	N/A	no
P14912	4CL1_PETCR	6, ., 2, ., 1, ., 1, 2	0.75	0.9421	0.7187	N/A	no
Q67W82	4CL4_ORYSJ	6, ., 2, ., 1, ., 1, 2	0.6538	0.9373	0.6958	yes	no
O24145	4CL1_TOBAC	6, ., 2, ., 1, ., 1, 2	0.7613	0.9542	0.7239	N/A	no
O24146	4CL2_TOBAC	6, ., 2, ., 1, ., 1, 2	0.7644	0.9590	0.7343	N/A	no
Q42524	4CL1_ARATH	6, ., 2, ., 1, ., 1, 2	0.7061	0.9590	0.7094	yes	no
O24540	4CL_VANPL	6, ., 2, ., 1, ., 1, 2	0.7406	0.9518	0.7142	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.2.1	0.963
4th Layer	6.2.1.12	0.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	4CL1	4-coumarate-coa ligase (545 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	PAL	RecName- Full=Phenylalanine ammonia-lyase; EC=4.3.1.24;; This is a key enzyme of plant metaboli [...] (715 aa)	•	0.702
	PAL2	SubName- Full=Phenylalanine ammonia-lyase; (712 aa)	•	0.702
	PAL3	SubName- Full=Phenylalanine ammonia-lyase; (715 aa)	•	0.702
	f5h	SubName- Full=Ferulate-5-hydroxylase; Flags- Precursor; (501 aa)	•	0.700
	CCR1	cinnamoyl CoA reductase (EC-1.2.1.44) (278 aa)	•	0.700
	PAL5	SubName- Full=Phenylalanine ammonia-lyase; (712 aa)	•	0.700
	CCR5	cinnamoyl CoA reductase (EC-1.2.1.44) (230 aa)	•	0.700
	CCR	SubName- Full=Cinnamoyl CoA reductase; (339 aa)	•	0.700
	SAD	SubName- Full=Cinnamyl alcohol dehydrogenase; (362 aa)	•	0.688
	CHS	SubName- Full=Chalcone synthase (Putative uncharacterized protein);; The primary product of thi [...] (397 aa)	•	0.687

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		415
PLN02246		537	PLN02246, PLN02246, 4-coumarate--CoA ligase	0.0
cd05904		504	cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL)	1e-180
cd05911		487	cd05911, Firefly_Luc_like, Firefly luciferase of l	1e-126
COG0318		534	COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/	1e-95
cd05936		468	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain	6e-94
pfam00501		412	pfam00501, AMP-binding, AMP-binding enzyme	2e-91
PLN02330		546	PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1	9e-75
PRK07656		513	PRK07656, PRK07656, long-chain-fatty-acid--CoA lig	4e-74
cd05917		347	cd05917, FACL_like_2, Uncharacterized subfamily of	4e-67
PRK06187		521	PRK06187, PRK06187, long-chain-fatty-acid--CoA lig	8e-66
cd05935		430	cd05935, LC_FACS_like, Putative long-chain fatty a	1e-63
cd05929		342	cd05929, BACL_like, Bacterial Bile acid CoA ligase	5e-61
PLN02574		560	PLN02574, PLN02574, 4-coumarate--CoA ligase-like	1e-60
PRK08314		546	PRK08314, PRK08314, long-chain-fatty-acid--CoA lig	9e-57
PRK06710		563	PRK06710, PRK06710, long-chain-fatty-acid--CoA lig	2e-55
PRK08316		523	PRK08316, PRK08316, acyl-CoA synthetase; Validated	1e-54
PRK05605		573	PRK05605, PRK05605, long-chain-fatty-acid--CoA lig	2e-54
cd04433		338	cd04433, AFD_class_I, Adenylate forming domain, Cl	3e-52
cd05907		456	cd05907, VL_LC_FACS_like, Long-chain fatty acid Co	6e-52
COG0365		528	COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat	4e-50
cd05934		421	cd05934, FACL_DitJ_like, Uncharacterized subfamily	3e-49
cd05903		437	cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li	8e-48
PRK08315		559	PRK08315, PRK08315, AMP-binding domain protein; Va	2e-46
cd05959		506	cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and	3e-46
PRK12583		558	PRK12583, PRK12583, acyl-CoA synthetase; Provision	1e-45
COG1022		613	COG1022, FAA1, Long-chain acyl-CoA synthetases (AM	2e-45
cd05920		483	cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l	3e-45
cd12119		517	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth	4e-45
PRK07059		557	PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig	2e-44
cd05927		539	cd05927, LC-FACS_euk, Eukaryotic long-chain fatty	9e-43
PRK07786		542	PRK07786, PRK07786, long-chain-fatty-acid--CoA lig	5e-42
PRK06839		496	PRK06839, PRK06839, acyl-CoA synthetase; Validated	5e-42
PRK03640		483	PRK03640, PRK03640, O-succinylbenzoic acid--CoA li	1e-41
PRK08974		560	PRK08974, PRK08974, long-chain-fatty-acid--CoA lig	1e-41
PRK06178		567	PRK06178, PRK06178, acyl-CoA synthetase; Validated	2e-41
cd05922		350	cd05922, FACL_like_6, Uncharacterized subfamily of	3e-41
PRK05677		562	PRK05677, PRK05677, long-chain-fatty-acid--CoA lig	3e-41
cd05941		430	cd05941, MCS, Malonyl-CoA synthetase (MCS)	1e-40
cd05931		547	cd05931, FAAL, Fatty acyl-AMP ligase (FAAL)	1e-40
TIGR03205		541	TIGR03205, pimA, dicarboxylate--CoA ligase PimA	2e-40
PRK08751		560	PRK08751, PRK08751, putative long-chain fatty acyl	1e-39
cd12118		520	cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt	1e-39
PRK07529		632	PRK07529, PRK07529, AMP-binding domain protein; Va	4e-39
PRK12492		562	PRK12492, PRK12492, long-chain-fatty-acid--CoA lig	3e-37
cd05926		345	cd05926, FACL_fum10p_like, Subfamily of fatty acid	3e-37
PRK06145		497	PRK06145, PRK06145, acyl-CoA synthetase; Validated	9e-37
PRK07470		528	PRK07470, PRK07470, acyl-CoA synthetase; Validated	3e-36
cd05919		436	cd05919, BCL_like, Benzoate CoA ligase (BCL) and s	8e-36
cd05912		407	cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase	1e-35
TIGR03098		517	TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form	6e-34
cd05909		489	cd05909, AAS_C, C-terminal domain of the acyl-acyl	9e-34
PRK06188		524	PRK06188, PRK06188, acyl-CoA synthetase; Validated	3e-33
cd05972		430	cd05972, MACS_like, Medium-chain acyl-CoA syntheta	3e-33
PRK07514		504	PRK07514, PRK07514, malonyl-CoA synthase; Validate	4e-33
cd05932		504	cd05932, LC_FACS_bac, Bacterial long-chain fatty a	2e-32
PRK08276		502	PRK08276, PRK08276, long-chain-fatty-acid--CoA lig	1e-31
PRK07788		549	PRK07788, PRK07788, acyl-CoA synthetase; Validated	6e-31
PRK06155		542	PRK06155, PRK06155, crotonobetaine/carnitine-CoA l	8e-31
PRK13391		511	PRK13391, PRK13391, acyl-CoA synthetase; Provision	1e-30
PRK08633		1146	PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola	2e-30
PRK06087		547	PRK06087, PRK06087, short chain acyl-CoA synthetas	3e-30
COG1021		542	COG1021, EntE, Peptide arylation enzymes [Secondar	7e-30
TIGR01733		409	TIGR01733, AA-adenyl-dom, amino acid adenylation d	8e-30
TIGR03208		538	TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate	2e-29
cd05944		359	cd05944, FACL_like_4, Uncharacterized subfamily of	4e-29
PRK13295		547	PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig	4e-29
PLN02736		651	PLN02736, PLN02736, long-chain acyl-CoA synthetase	4e-29
cd05971		439	cd05971, MACS_like_3, Uncharacterized subfamily of	5e-29
PRK12406		509	PRK12406, PRK12406, long-chain-fatty-acid--CoA lig	6e-29
cd05945		447	cd05945, DltA, D-alanine:D-alanyl carrier protein	1e-28
cd05906		560	cd05906, A_NRPS_TubE_like, The adenylation domain	4e-28
PRK08008		517	PRK08008, caiC, putative crotonobetaine/carnitine-	8e-28
PRK07798		533	PRK07798, PRK07798, acyl-CoA synthetase; Validated	9e-28
PRK08162		545	PRK08162, PRK08162, acyl-CoA synthetase; Validated	5e-26
PRK04319		570	PRK04319, PRK04319, acetyl-CoA synthetase; Provisi	7e-26
TIGR01923		436	TIGR01923, menE, O-succinylbenzoate-CoA ligase	2e-25
cd05930		445	cd05930, A_NRPS, The adenylation domain of nonribo	3e-25
TIGR02262		508	TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil	3e-25
TIGR02275		526	TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP	5e-25
PLN02860		563	PLN02860, PLN02860, o-succinylbenzoate-CoA ligase	1e-24
cd12114		476	cd12114, A_NRPS_TlmIV_like, The adenylation domain	2e-24
cd05908		499	cd05908, A_NRPS_MycA_like, The adenylation domain	5e-24
cd05918		447	cd05918, A_NRPS_SidN3_like, The adenylation (A) do	7e-24
PRK06018		542	PRK06018, PRK06018, putative acyl-CoA synthetase;	2e-23
PRK07867		529	PRK07867, PRK07867, acyl-CoA synthetase; Validated	2e-23
cd05940		444	cd05940, FATP_FACS, Fatty acid transport proteins	3e-23
cd05958		487	cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL)	3e-23
cd12117		474	cd12117, A_NRPS_Srf_like, The adenylation domain o	4e-23
COG1020		642	COG1020, EntF, Non-ribosomal peptide synthetase mo	1e-22
PRK06334		539	PRK06334, PRK06334, long chain fatty acid--[acyl-c	3e-22
cd05970		537	cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s	1e-21
PRK06164		540	PRK06164, PRK06164, acyl-CoA synthetase; Validated	2e-21
PRK08279		600	PRK08279, PRK08279, long-chain-acyl-CoA synthetase	5e-21
PRK05691		4334	PRK05691, PRK05691, peptide synthase; Validated	6e-21
PRK07008		539	PRK07008, PRK07008, long-chain-fatty-acid--CoA lig	9e-21
cd05933		594	cd05933, ACSBG_like, Bubblegum-like very long-chai	6e-20
cd05968		474	cd05968, AACS_like, Uncharacterized acyl-CoA synth	2e-19
PRK07638		487	PRK07638, PRK07638, acyl-CoA synthetase; Validated	4e-19
PRK09088		488	PRK09088, PRK09088, acyl-CoA synthetase; Validated	4e-19
cd05924		365	cd05924, FACL_like_5, Uncharacterized subfamily of	6e-19
PRK03584		655	PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr	2e-18
PRK05852		534	PRK05852, PRK05852, acyl-CoA synthetase; Validated	3e-18
cd05938		535	cd05938, hsFATP2a_ACSVL_like, Fatty acid transport	4e-18
cd05943		616	cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac	5e-18
cd05928		530	cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co	5e-18
PRK09274		552	PRK09274, PRK09274, peptide synthase; Provisional	7e-18
PRK07768		545	PRK07768, PRK07768, long-chain-fatty-acid--CoA lig	9e-18
PRK07769		631	PRK07769, PRK07769, long-chain-fatty-acid--CoA lig	1e-17
PRK06814		1140	PRK06814, PRK06814, acylglycerophosphoethanolamine	2e-17
cd05967		607	cd05967, PrpE, Propionyl-CoA synthetase (PrpE)	2e-17
cd05923		495	cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL)	3e-17
cd05966		602	cd05966, ACS, Acetyl-CoA synthetase (also known as	4e-17
PRK12316		5163	PRK12316, PRK12316, peptide synthase; Provisional	4e-17
cd05969		443	cd05969, MACS_like_4, Uncharacterized subfamily of	5e-17
PRK12316		5163	PRK12316, PRK12316, peptide synthase; Provisional	1e-16
cd05973		440	cd05973, MACS_like_2, Uncharacterized subfamily of	1e-16
cd05910		455	cd05910, FACL_like_1, Uncharacterized subfamily of	1e-16
PRK13388		540	PRK13388, PRK13388, acyl-CoA synthetase; Provision	2e-16
PRK09192		579	PRK09192, PRK09192, acyl-CoA synthetase; Validated	2e-16
PRK13390		501	PRK13390, PRK13390, acyl-CoA synthetase; Provision	2e-16
PRK05691		4334	PRK05691, PRK05691, peptide synthase; Validated	5e-16
cd05921		559	cd05921, FCS, Feruloyl-CoA synthetase (FCS)	8e-16
PLN02614		666	PLN02614, PLN02614, long-chain acyl-CoA synthetase	9e-16
PRK12316		5163	PRK12316, PRK12316, peptide synthase; Provisional	1e-15
PRK12467		3956	PRK12467, PRK12467, peptide synthase; Provisional	2e-15
TIGR02188		625	TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase	6e-15
PRK12467		3956	PRK12467, PRK12467, peptide synthase; Provisional	1e-14
PRK12467		3956	PRK12467, PRK12467, peptide synthase; Provisional	1e-14
cd05939		474	cd05939, hsFATP4_like, Fatty acid transport protei	1e-14
cd05915		509	cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase	2e-14
PRK10524		629	PRK10524, prpE, propionyl-CoA synthetase; Provisio	2e-14
PLN02861		660	PLN02861, PLN02861, long-chain-fatty-acid-CoA liga	8e-14
cd05937		468	cd05937, FATP_chFAT1_like, Uncharacterized subfami	1e-13
cd05974		433	cd05974, MACS_like_1, Uncharacterized subfamily of	2e-13
PRK13382		537	PRK13382, PRK13382, acyl-CoA synthetase; Provision	3e-13
PLN02430		660	PLN02430, PLN02430, long-chain-fatty-acid-CoA liga	3e-13
PRK12476		612	PRK12476, PRK12476, putative fatty-acid--CoA ligas	7e-13
PLN03102		579	PLN03102, PLN03102, acyl-activating enzyme; Provis	1e-12
cd12116		438	cd12116, A_NRPS_Ta1_like, The adenylation domain o	1e-12
PRK08043		718	PRK08043, PRK08043, bifunctional acyl-[acyl carrie	1e-12
PLN02387		696	PLN02387, PLN02387, long-chain-fatty-acid-CoA liga	2e-12
TIGR02316		628	TIGR02316, propion_prpE, propionate--CoA ligase	4e-12
cd12115		449	cd12115, A_NRPS_Sfm_like, The adenylation domain o	4e-11
PRK09029		458	PRK09029, PRK09029, O-succinylbenzoic acid--CoA li	5e-11
cd05914		448	cd05914, FACL_like_3, Uncharacterized subfamily of	5e-11
PRK12582		624	PRK12582, PRK12582, acyl-CoA synthetase; Provision	3e-10
PLN02479		567	PLN02479, PLN02479, acetate-CoA ligase	3e-10
PRK06060		705	PRK06060, PRK06060, acyl-CoA synthetase; Validated	4e-10
PRK10252		1296	PRK10252, entF, enterobactin synthase subunit F; P	6e-10
PRK12316		5163	PRK12316, PRK12316, peptide synthase; Provisional	1e-09
PRK10946		536	PRK10946, entE, enterobactin synthase subunit E; P	2e-09
TIGR01217		652	TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase	2e-09
PTZ00237		647	PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi	5e-09
TIGR03443		1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	1e-08
PRK07787		471	PRK07787, PRK07787, acyl-CoA synthetase; Validated	2e-08
PRK04813		503	PRK04813, PRK04813, D-alanine--poly(phosphoribitol	8e-08
PRK05691		4334	PRK05691, PRK05691, peptide synthase; Validated	9e-08
PRK05850		578	PRK05850, PRK05850, acyl-CoA synthetase; Validated	9e-08
PRK05691		4334	PRK05691, PRK05691, peptide synthase; Validated	1e-07
PTZ00216		700	PTZ00216, PTZ00216, acyl-CoA synthetase; Provision	1e-07
PTZ00216		700	PTZ00216, PTZ00216, acyl-CoA synthetase; Provision	3e-07
PLN02654		666	PLN02654, PLN02654, acetate-CoA ligase	3e-07
PLN03052		728	PLN03052, PLN03052, acetate--CoA ligase; Provision	3e-07
PRK05857		540	PRK05857, PRK05857, acyl-CoA synthetase; Validated	5e-07
PRK05620		576	PRK05620, PRK05620, long-chain-fatty-acid--CoA lig	5e-07
PRK08180		614	PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe	1e-06
PRK00174		637	PRK00174, PRK00174, acetyl-CoA synthetase; Provisi	4e-06
TIGR01734		502	TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho	6e-06
PTZ00342		746	PTZ00342, PTZ00342, acyl-CoA synthetase; Provision	2e-05
cd05905		556	cd05905, Dip2, Disco-interacting protein 2 (Dip2)	2e-05
COG1541		438	COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme	2e-05
PRK13383		516	PRK13383, PRK13383, acyl-CoA synthetase; Provision	2e-04
PRK08308		414	PRK08308, PRK08308, acyl-CoA synthetase; Validated	0.002
PRK07824		358	PRK07824, PRK07824, O-succinylbenzoic acid--CoA li	0.002

>gnl\|CDD\|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase	Back alignment and domain information

 Score =  825 bits (2134), Expect = 0.0
 Identities = 311/397 (78%), Positives = 352/397 (88%), Gaps = 1/397 (0%)

Query: 3   AKQDHQEFIFRSKLPDIYIPNHLPLHTYCFENISQFADRPCIINGPTGDVYTYADVELTS 62
                +EFIFRSKLPDIYIPNHLPLH YCFE +S+F+DRPC+I+G TG VYTYADVEL S
Sbjct: 1   EASASEEFIFRSKLPDIYIPNHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLS 60

Query: 63  RKVAAGLSKLGVQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTANPFYTPPEIAKQAIA 122
           R+VAAGL KLG+++GDV+MLLL NCP+FV AFLGAS  GA +TTANPFYTP EIAKQA A
Sbjct: 61  RRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKA 120

Query: 123 SKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLHFSELITQADENEIPAVKINPD 182
           S AK+IITQ+ Y DK++ L+E  G  +VTID PPE CLHFSEL TQADENE+P V+I+PD
Sbjct: 121 SGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSEL-TQADENELPEVEISPD 179

Query: 183 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSL 242
           DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLY H +DVILCVLP+FHIYSL
Sbjct: 180 DVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSL 239

Query: 243 NSVLLCALRVGAAILIMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSS 302
           NSVLLC LRVGAAILIM KF+I  L+EL+Q++KVT+APFVPPIVLA+AKS  V+KYD+SS
Sbjct: 240 NSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSS 299

Query: 303 IRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACG 362
           IR V+SGAAP+GKELEDA RAKLP+A LGQGYGMTEAGPVL+MCLAFAKEPF +KSG+CG
Sbjct: 300 IRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCG 359

Query: 363 TVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKG 399
           TVVRNAE+KIVDP+TG SLPRNQ GEICIRG QIMKG
Sbjct: 360 TVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKG 396

Length = 537

>gnl\|CDD\|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL)	Back alignment and domain information

>gnl\|CDD\|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL)	Back alignment and domain information

>gnl\|CDD\|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD	Back alignment and domain information

>gnl\|CDD\|215954 pfam00501, AMP-binding, AMP-binding enzyme	Back alignment and domain information

>gnl\|CDD\|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1	Back alignment and domain information

>gnl\|CDD\|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase	Back alignment and domain information

>gnl\|CDD\|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins	Back alignment and domain information

>gnl\|CDD\|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like	Back alignment and domain information

>gnl\|CDD\|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I	Back alignment and domain information

>gnl\|CDD\|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases	Back alignment and domain information

>gnl\|CDD\|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase)	Back alignment and domain information

>gnl\|CDD\|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated	Back alignment and domain information

>gnl\|CDD\|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase)	Back alignment and domain information

>gnl\|CDD\|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase	Back alignment and domain information

>gnl\|CDD\|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	Back alignment and domain information

>gnl\|CDD\|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)	Back alignment and domain information

>gnl\|CDD\|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS)	Back alignment and domain information

>gnl\|CDD\|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL)	Back alignment and domain information

>gnl\|CDD\|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA	Back alignment and domain information

>gnl\|CDD\|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis	Back alignment and domain information

>gnl\|CDD\|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated	Back alignment and domain information

>gnl\|CDD\|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis	Back alignment and domain information

>gnl\|CDD\|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes	Back alignment and domain information

>gnl\|CDD\|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE)	Back alignment and domain information

>gnl\|CDD\|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated	Back alignment and domain information

>gnl\|CDD\|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas)	Back alignment and domain information

>gnl\|CDD\|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM)	Back alignment and domain information

>gnl\|CDD\|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated	Back alignment and domain information

>gnl\|CDD\|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase	Back alignment and domain information

>gnl\|CDD\|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

>gnl\|CDD\|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain	Back alignment and domain information

>gnl\|CDD\|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed	Back alignment and domain information

>gnl\|CDD\|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase	Back alignment and domain information

>gnl\|CDD\|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	Back alignment and domain information

>gnl\|CDD\|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA)	Back alignment and domain information

>gnl\|CDD\|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents	Back alignment and domain information

>gnl\|CDD\|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS)	Back alignment and domain information

>gnl\|CDD\|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family	Back alignment and domain information

>gnl\|CDD\|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase	Back alignment and domain information

>gnl\|CDD\|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes	Back alignment and domain information

>gnl\|CDD\|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA)	Back alignment and domain information

>gnl\|CDD\|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS)	Back alignment and domain information

>gnl\|CDD\|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes	Back alignment and domain information

>gnl\|CDD\|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL)	Back alignment and domain information

>gnl\|CDD\|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C)	Back alignment and domain information

>gnl\|CDD\|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>gnl\|CDD\|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like	Back alignment and domain information

>gnl\|CDD\|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235564 PRK05691, PRK05691, peptide synthase; Validated	Back alignment and domain information

>gnl\|CDD\|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS)	Back alignment and domain information

>gnl\|CDD\|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase	Back alignment and domain information

>gnl\|CDD\|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins	Back alignment and domain information

>gnl\|CDD\|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS)	Back alignment and domain information

>gnl\|CDD\|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM)	Back alignment and domain information

>gnl\|CDD\|236443 PRK09274, PRK09274, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional	Back alignment and domain information

>gnl\|CDD\|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE)	Back alignment and domain information

>gnl\|CDD\|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL)	Back alignment and domain information

>gnl\|CDD\|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)	Back alignment and domain information

>gnl\|CDD\|237054 PRK12316, PRK12316, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS)	Back alignment and domain information

>gnl\|CDD\|237054 PRK12316, PRK12316, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	Back alignment and domain information

>gnl\|CDD\|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|139538 PRK13390, PRK13390, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|235564 PRK05691, PRK05691, peptide synthase; Validated	Back alignment and domain information

>gnl\|CDD\|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS)	Back alignment and domain information

>gnl\|CDD\|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase	Back alignment and domain information

>gnl\|CDD\|237054 PRK12316, PRK12316, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|237108 PRK12467, PRK12467, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase	Back alignment and domain information

>gnl\|CDD\|237108 PRK12467, PRK12467, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|237108 PRK12467, PRK12467, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins	Back alignment and domain information

>gnl\|CDD\|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	Back alignment and domain information

>gnl\|CDD\|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase	Back alignment and domain information

>gnl\|CDD\|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi	Back alignment and domain information

>gnl\|CDD\|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	Back alignment and domain information

>gnl\|CDD\|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase	Back alignment and domain information

>gnl\|CDD\|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional	Back alignment and domain information

>gnl\|CDD\|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase	Back alignment and domain information

>gnl\|CDD\|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated	Back alignment and domain information

>gnl\|CDD\|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein	Back alignment and domain information

>gnl\|CDD\|131369 TIGR02316, propion_prpE, propionate--CoA ligase	Back alignment and domain information

>gnl\|CDD\|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae	Back alignment and domain information

>gnl\|CDD\|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL)	Back alignment and domain information

>gnl\|CDD\|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|178097 PLN02479, PLN02479, acetate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional	Back alignment and domain information

>gnl\|CDD\|237054 PRK12316, PRK12316, peptide synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional	Back alignment and domain information

>gnl\|CDD\|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase	Back alignment and domain information

>gnl\|CDD\|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase	Back alignment and domain information

>gnl\|CDD\|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional	Back alignment and domain information

>gnl\|CDD\|235564 PRK05691, PRK05691, peptide synthase; Validated	Back alignment and domain information

>gnl\|CDD\|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|235564 PRK05691, PRK05691, peptide synthase; Validated	Back alignment and domain information

>gnl\|CDD\|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|215353 PLN02654, PLN02654, acetate-CoA ligase	Back alignment and domain information

>gnl\|CDD\|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional	Back alignment and domain information

>gnl\|CDD\|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>gnl\|CDD\|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed	Back alignment and domain information

>gnl\|CDD\|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1	Back alignment and domain information

>gnl\|CDD\|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|213273 cd05905, Dip2, Disco-interacting protein 2 (Dip2)	Back alignment and domain information

>gnl\|CDD\|224458 COG1541, PaaK, Coenzyme F390 synthetase [Coenzyme metabolism]	Back alignment and domain information

>gnl\|CDD\|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		415
KOG1176		537	consensus Acyl-CoA synthetase [Lipid transport and	100.0
PLN02246		537	4-coumarate--CoA ligase	100.0
COG0318		534	CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l	100.0
KOG1177		596	consensus Long chain fatty acid acyl-CoA ligase [L	100.0
COG0365		528	Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l	100.0
PTZ00342		746	acyl-CoA synthetase; Provisional	100.0
COG1021		542	EntE Peptide arylation enzymes [Secondary metaboli	100.0
PLN02614		666	long-chain acyl-CoA synthetase	100.0
PLN02574		560	4-coumarate--CoA ligase-like	100.0
PRK06334		539	long chain fatty acid--[acyl-carrier-protein] liga	100.0
PLN02736		651	long-chain acyl-CoA synthetase	100.0
COG1022		613	FAA1 Long-chain acyl-CoA synthetases (AMP-forming)	100.0
PLN02861		660	long-chain-fatty-acid-CoA ligase	100.0
PLN02330		546	4-coumarate--CoA ligase-like 1	100.0
PRK07788		549	acyl-CoA synthetase; Validated	100.0
PF00501		417	AMP-binding: AMP-binding enzyme; InterPro: IPR0008	100.0
PRK08314		546	long-chain-fatty-acid--CoA ligase; Validated	100.0
PLN02387		696	long-chain-fatty-acid-CoA ligase family protein	100.0
TIGR02316		628	propion_prpE propionate--CoA ligase. This family c	100.0
PLN02654		666	acetate-CoA ligase	100.0
PLN02860		563	o-succinylbenzoate-CoA ligase	100.0
TIGR02188		625	Ac_CoA_lig_AcsA acetate--CoA ligase. This model de	100.0
PRK13295		547	cyclohexanecarboxylate-CoA ligase; Reviewed	100.0
KOG1256		691	consensus Long-chain acyl-CoA synthetases (AMP-for	100.0
PRK05677		562	long-chain-fatty-acid--CoA ligase; Validated	100.0
PTZ00216		700	acyl-CoA synthetase; Provisional	100.0
PRK05605		573	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK00174		637	acetyl-CoA synthetase; Provisional	100.0
PRK07656		513	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK04319		570	acetyl-CoA synthetase; Provisional	100.0
PRK09274		552	peptide synthase; Provisional	100.0
PTZ00237		647	acetyl-CoA synthetase; Provisional	100.0
PRK08180		614	feruloyl-CoA synthase; Reviewed	100.0
PRK07529		632	AMP-binding domain protein; Validated	100.0
PRK10524		629	prpE propionyl-CoA synthetase; Provisional	100.0
PRK08316		523	acyl-CoA synthetase; Validated	100.0
PLN02430		660	long-chain-fatty-acid-CoA ligase	100.0
PRK08315		559	AMP-binding domain protein; Validated	100.0
PRK06187		521	long-chain-fatty-acid--CoA ligase; Validated	100.0
TIGR02275		527	DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot	100.0
PRK05857		540	acyl-CoA synthetase; Validated	100.0
PRK12467		3956	peptide synthase; Provisional	100.0
PRK07514		504	malonyl-CoA synthase; Validated	100.0
PRK06839		496	acyl-CoA synthetase; Validated	100.0
PRK05852		534	acyl-CoA synthetase; Validated	100.0
PRK13382		537	acyl-CoA synthetase; Provisional	100.0
PRK07059		557	Long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK08633		1146	2-acyl-glycerophospho-ethanolamine acyltransferase	100.0
PRK07786		542	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK03640		483	O-succinylbenzoic acid--CoA ligase; Provisional	100.0
PRK12582		624	acyl-CoA synthetase; Provisional	100.0
PRK10946		536	entE enterobactin synthase subunit E; Provisional	100.0
PRK06087		547	short chain acyl-CoA synthetase; Reviewed	100.0
PRK07638		487	acyl-CoA synthetase; Validated	100.0
PRK12492		562	long-chain-fatty-acid--CoA ligase; Provisional	100.0
PRK07769		631	long-chain-fatty-acid--CoA ligase; Validated	100.0
TIGR03208		538	cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase.	100.0
PRK06145		497	acyl-CoA synthetase; Validated	100.0
PRK06060		705	acyl-CoA synthetase; Validated	100.0
TIGR03098		515	ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor	100.0
PRK12476		612	putative fatty-acid--CoA ligase; Provisional	100.0
PRK07470		528	acyl-CoA synthetase; Validated	100.0
PRK06155		542	crotonobetaine/carnitine-CoA ligase; Provisional	100.0
PRK06178		567	acyl-CoA synthetase; Validated	100.0
PRK06710		563	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK12583		558	acyl-CoA synthetase; Provisional	100.0
TIGR02262		508	benz_CoA_lig benzoate-CoA ligase family. Character	100.0
PRK12467		3956	peptide synthase; Provisional	100.0
PRK10252		1296	entF enterobactin synthase subunit F; Provisional	100.0
PRK03584		655	acetoacetyl-CoA synthetase; Provisional	100.0
PRK06188		524	acyl-CoA synthetase; Validated	100.0
PLN03052		728	acetate--CoA ligase; Provisional	100.0
PRK12316		5163	peptide synthase; Provisional	100.0
PRK06164		540	acyl-CoA synthetase; Validated	100.0
TIGR03205		541	pimA dicarboxylate--CoA ligase PimA. PimA, a membe	100.0
PRK08008		517	caiC putative crotonobetaine/carnitine-CoA ligase;	100.0
PRK12316		5163	peptide synthase; Provisional	100.0
TIGR01734		502	D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig	100.0
PRK08751		560	putative long-chain fatty acyl CoA ligase; Provisi	100.0
PRK08974		560	long-chain-fatty-acid--CoA ligase; Validated	100.0
TIGR03443		1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	100.0
PRK07867		529	acyl-CoA synthetase; Validated	100.0
PRK08043		718	bifunctional acyl-[acyl carrier protein] synthetas	100.0
PRK05691		4334	peptide synthase; Validated	100.0
KOG1180		678	consensus Acyl-CoA synthetase [Lipid transport and	100.0
PLN03102		579	acyl-activating enzyme; Provisional	100.0
TIGR01217		652	ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym	100.0
PRK13383		516	acyl-CoA synthetase; Provisional	100.0
PRK05851		525	long-chain-fatty-acid--[acyl-carrier-protein] liga	100.0
PRK07008		539	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK13388		540	acyl-CoA synthetase; Provisional	100.0
PRK04813		503	D-alanine--poly(phosphoribitol) ligase subunit 1;	100.0
PRK05691		4334	peptide synthase; Validated	100.0
PRK09088		488	acyl-CoA synthetase; Validated	100.0
PRK05620		576	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK06018		542	putative acyl-CoA synthetase; Provisional	100.0
PRK13390		501	acyl-CoA synthetase; Provisional	100.0
PLN02479		567	acetate-CoA ligase	100.0
PRK08279		600	long-chain-acyl-CoA synthetase; Validated	100.0
PRK05850		578	acyl-CoA synthetase; Validated	100.0
PRK07787		471	acyl-CoA synthetase; Validated	100.0
PRK08162		545	acyl-CoA synthetase; Validated	100.0
PRK07798		533	acyl-CoA synthetase; Validated	100.0
TIGR01733		408	AA-adenyl-dom amino acid adenylation domain. This	100.0
PRK06814		1140	acylglycerophosphoethanolamine acyltransferase; Pr	100.0
PRK13391		511	acyl-CoA synthetase; Provisional	100.0
PRK09192		579	acyl-CoA synthetase; Validated	100.0
PRK08276		502	long-chain-fatty-acid--CoA ligase; Validated	100.0
KOG1179		649	consensus Very long-chain acyl-CoA synthetase/fatt	100.0
PRK12406		509	long-chain-fatty-acid--CoA ligase; Provisional	100.0
PRK07768		545	long-chain-fatty-acid--CoA ligase; Validated	100.0
PRK07868		994	acyl-CoA synthetase; Validated	100.0
PRK09029		458	O-succinylbenzoic acid--CoA ligase; Provisional	100.0
PRK07445		452	O-succinylbenzoic acid--CoA ligase; Reviewed	100.0
TIGR01923		436	menE O-succinylbenzoate-CoA ligase. This model rep	100.0
PLN03051		499	acyl-activating enzyme; Provisional	100.0
KOG1175		626	consensus Acyl-CoA synthetase [Lipid transport and	100.0
PRK08308		414	acyl-CoA synthetase; Validated	100.0
PTZ00297		1452	pantothenate kinase; Provisional	100.0
COG1020		642	EntF Non-ribosomal peptide synthetase modules and	100.0
TIGR03089		227	conserved hypothetical protein TIGR03089. This pro	99.96
PRK07824		358	O-succinylbenzoic acid--CoA ligase; Provisional	99.93
KOG3628		1363	consensus Predicted AMP-binding protein [General f	99.93
TIGR02155		422	PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet	99.9
TIGR03335		445	F390_ftsA coenzyme F390 synthetase. This enzyme, c	99.88
TIGR02372		386	4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv	99.87
COG1541		438	PaaK Coenzyme F390 synthetase [Coenzyme metabolism	99.78
KOG3628		1363	consensus Predicted AMP-binding protein [General f	99.72
KOG1178		1032	consensus Non-ribosomal peptide synthetase/alpha-a	99.64
TIGR02304		430	aden_form_hyp probable adenylate-forming enzyme. M	99.29
PF04443		365	LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR	99.03
COG1541		438	PaaK Coenzyme F390 synthetase [Coenzyme metabolism	95.39
PLN02247		606	indole-3-acetic acid-amido synthetase	94.75
PLN02620		612	indole-3-acetic acid-amido synthetase	93.31
TIGR03335		445	F390_ftsA coenzyme F390 synthetase. This enzyme, c	89.08
TIGR02155		422	PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet	89.02
PF00501		417	AMP-binding: AMP-binding enzyme; InterPro: IPR0008	84.28
KOG1177		596	consensus Long chain fatty acid acyl-CoA ligase [L	83.65
TIGR03590		279	PseG pseudaminic acid biosynthesis-associated prot	82.73
PRK07656		513	long-chain-fatty-acid--CoA ligase; Validated	80.22

>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=1e-56  Score=426.50  Aligned_cols=369  Identities=37%  Similarity=0.595  Sum_probs=312.1

Q ss_pred             HhhhccCCCC-cEEEeCCC-CCeeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCchhHHHHHHHHHHhCCeEeec
Q 014952           32 FENISQFADR-PCIINGPT-GDVYTYADVELTSRKVAAGLSKLG--VQKGDVIMLLLQNCPQFVFAFLGASYIGATSTTA  107 (415)
Q Consensus        32 ~~~a~~~p~~-~a~~~~~~-~~~~Ty~el~~~~~~~a~~L~~~g--~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l  107 (415)
                      ...+..++++ +.+++... ++.+||+|+++++.|+|..|.++|  +++||+|+++++|+.+++++++||+.+|++..++
T Consensus        23 ~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~  102 (537)
T KOG1176|consen   23 GRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPL  102 (537)
T ss_pred             cccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccccc
Confidence            3333344444 66766532 699999999999999999999875  8999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHhcCceEEEEcccchHHHHhhhhhcCceEEEeCCCCCCccc----------hhhhhhhcccCCCCcc
Q 014952          108 NPFYTPPEIAKQAIASKAKIIITQAVYNDKVRDLSEHHGARIVTIDPPPENCLH----------FSELITQADENEIPAV  177 (415)
Q Consensus       108 ~~~~~~~~~~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------~~~l~~~~~~~~~~~~  177 (415)
                      ||.++..++...++.++++++|++....+++.+.......+++++... +....          ++.+ ........ ..
T Consensus       103 Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~  179 (537)
T KOG1176|consen  103 NPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGD-EGVISISDLVEDLDAFEDL-MPEGLPDG-IR  179 (537)
T ss_pred             CcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecc-cCccccccccccccchhhc-cccCCCcc-cc
Confidence            999999999999999999999999999999988776655666666543 11111          2222 11111111 45


Q ss_pred             cCCCCCeEEEecCCCCCCCCceeeechHHHHHHHhhhhcCCCCCccCCCCcEEEEccchHHHHhhHHHHHHHHHcCcEEE
Q 014952          178 KINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYLHKEDVILCVLPLFHIYSLNSVLLCALRVGAAIL  257 (415)
Q Consensus       178 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~l~~l~~G~~~v  257 (415)
                      +...++++.|.|||||||.||||++||++++.+......    ...+...++.++.+|++|.+|+...++..+..|++++
T Consensus       180 ~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~----~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii  255 (537)
T KOG1176|consen  180 PVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKI----GWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTII  255 (537)
T ss_pred             cCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhh----cccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEE
Confidence            566799999999999999999999999999988776655    3346678999999999999999975555777777777


Q ss_pred             EcCCCCHHHHHHHHHhcCceeeecchHHHHHHHcCCCCCCCCcccceeeeecCCCCCHHHHHHHHhhCCCCccccccccc
Q 014952          258 IMQKFDIVKLMELVQKYKVTVAPFVPPIVLAVAKSGDVDKYDMSSIRTVMSGAAPMGKELEDAVRAKLPHAKLGQGYGMT  337 (415)
Q Consensus       258 ~~~~~~~~~~~~~l~~~~~t~l~~~p~~l~~l~~~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~t  337 (415)
                      ....+++..+++.+++|++|++.++|.++..|++.+.....+|+++|.+.+||+++++++.+++++++|...+.+.||+|
T Consensus       256 ~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmT  335 (537)
T KOG1176|consen  256 CLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMT  335 (537)
T ss_pred             ECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccc
Confidence            77888999999999999999999999999999999877889999999999999999999999999999779999999999


Q ss_pred             cCCccccccccccCCccccCCCcccccccCCeEEEEeCCCCCCCCCCCceeEEEecCccccccccCCcceeeeee
Q 014952          338 EAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIVDPDTGISLPRNQAGEICIRGAQIMKGTYHIYAPFLLSIV  412 (415)
Q Consensus       338 E~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~  412 (415)
                      |+++.++.+..   .+. .+++++|+++++++++|.+ ++|+.+++++.||||++|+.++.|||+||++|+.+|=
T Consensus       336 E~~~~~~~~~~---~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~  405 (537)
T KOG1176|consen  336 EAGGLITSNDW---GPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFD  405 (537)
T ss_pred             cccCceeecCC---Ccc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcc
Confidence            99988877631   111 5789999999988888888 8899999999999999999999999999999987764

>PLN02246 4-coumarate--CoA ligase	Back alignment and domain information

>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]	Back alignment and domain information

>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]	Back alignment and domain information

>PTZ00342 acyl-CoA synthetase; Provisional	Back alignment and domain information

>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>PLN02614 long-chain acyl-CoA synthetase	Back alignment and domain information

>PLN02574 4-coumarate--CoA ligase-like	Back alignment and domain information

>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated	Back alignment and domain information

>PLN02736 long-chain acyl-CoA synthetase	Back alignment and domain information

>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	Back alignment and domain information

>PLN02861 long-chain-fatty-acid-CoA ligase	Back alignment and domain information

>PLN02330 4-coumarate--CoA ligase-like 1	Back alignment and domain information

>PRK07788 acyl-CoA synthetase; Validated	Back alignment and domain information

>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]	Back alignment and domain information

>PRK08314 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PLN02387 long-chain-fatty-acid-CoA ligase family protein	Back alignment and domain information

>TIGR02316 propion_prpE propionate--CoA ligase	Back alignment and domain information

>PLN02654 acetate-CoA ligase	Back alignment and domain information

>PLN02860 o-succinylbenzoate-CoA ligase	Back alignment and domain information

>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase	Back alignment and domain information

>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed	Back alignment and domain information

>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]	Back alignment and domain information

>PRK05677 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PTZ00216 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK05605 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK00174 acetyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK07656 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK04319 acetyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK09274 peptide synthase; Provisional	Back alignment and domain information

>PTZ00237 acetyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK08180 feruloyl-CoA synthase; Reviewed	Back alignment and domain information

>PRK07529 AMP-binding domain protein; Validated	Back alignment and domain information

>PRK10524 prpE propionyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK08316 acyl-CoA synthetase; Validated	Back alignment and domain information

>PLN02430 long-chain-fatty-acid-CoA ligase	Back alignment and domain information

>PRK08315 AMP-binding domain protein; Validated	Back alignment and domain information

>PRK06187 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase	Back alignment and domain information

>PRK05857 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK12467 peptide synthase; Provisional	Back alignment and domain information

>PRK07514 malonyl-CoA synthase; Validated	Back alignment and domain information

>PRK06839 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK05852 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK13382 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated	Back alignment and domain information

>PRK07786 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>PRK12582 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK10946 entE enterobactin synthase subunit E; Provisional	Back alignment and domain information

>PRK06087 short chain acyl-CoA synthetase; Reviewed	Back alignment and domain information

>PRK07638 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>PRK07769 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase	Back alignment and domain information

>PRK06145 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK06060 acyl-CoA synthetase; Validated	Back alignment and domain information

>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated	Back alignment and domain information

>PRK12476 putative fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>PRK07470 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional	Back alignment and domain information

>PRK06178 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK06710 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK12583 acyl-CoA synthetase; Provisional	Back alignment and domain information

>TIGR02262 benz_CoA_lig benzoate-CoA ligase family	Back alignment and domain information

>PRK12467 peptide synthase; Provisional	Back alignment and domain information

>PRK10252 entF enterobactin synthase subunit F; Provisional	Back alignment and domain information

>PRK03584 acetoacetyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK06188 acyl-CoA synthetase; Validated	Back alignment and domain information

>PLN03052 acetate--CoA ligase; Provisional	Back alignment and domain information

>PRK12316 peptide synthase; Provisional	Back alignment and domain information

>PRK06164 acyl-CoA synthetase; Validated	Back alignment and domain information

>TIGR03205 pimA dicarboxylate--CoA ligase PimA	Back alignment and domain information

>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated	Back alignment and domain information

>PRK12316 peptide synthase; Provisional	Back alignment and domain information

>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1	Back alignment and domain information

>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional	Back alignment and domain information

>PRK08974 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase	Back alignment and domain information

>PRK07867 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated	Back alignment and domain information

>PRK05691 peptide synthase; Validated	Back alignment and domain information

>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]	Back alignment and domain information

>PLN03102 acyl-activating enzyme; Provisional	Back alignment and domain information

>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase	Back alignment and domain information

>PRK13383 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated	Back alignment and domain information

>PRK07008 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK13388 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional	Back alignment and domain information

>PRK05691 peptide synthase; Validated	Back alignment and domain information

>PRK09088 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK05620 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK06018 putative acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK13390 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PLN02479 acetate-CoA ligase	Back alignment and domain information

>PRK08279 long-chain-acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK05850 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK07787 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK08162 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK07798 acyl-CoA synthetase; Validated	Back alignment and domain information

>TIGR01733 AA-adenyl-dom amino acid adenylation domain	Back alignment and domain information

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional	Back alignment and domain information

>PRK13391 acyl-CoA synthetase; Provisional	Back alignment and domain information

>PRK09192 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK08276 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]	Back alignment and domain information

>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional	Back alignment and domain information

>PRK07768 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

>PRK07868 acyl-CoA synthetase; Validated	Back alignment and domain information

>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed	Back alignment and domain information

>TIGR01923 menE O-succinylbenzoate-CoA ligase	Back alignment and domain information

>PLN03051 acyl-activating enzyme; Provisional	Back alignment and domain information

>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]	Back alignment and domain information

>PRK08308 acyl-CoA synthetase; Validated	Back alignment and domain information

>PTZ00297 pantothenate kinase; Provisional	Back alignment and domain information

>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>TIGR03089 conserved hypothetical protein TIGR03089	Back alignment and domain information

>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional	Back alignment and domain information

>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]	Back alignment and domain information

>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase	Back alignment and domain information

>TIGR03335 F390_ftsA coenzyme F390 synthetase	Back alignment and domain information

>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family	Back alignment and domain information

>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]	Back alignment and domain information

>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]	Back alignment and domain information

>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]	Back alignment and domain information

>TIGR02304 aden_form_hyp probable adenylate-forming enzyme	Back alignment and domain information

>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria	Back alignment and domain information

>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]	Back alignment and domain information

>PLN02247 indole-3-acetic acid-amido synthetase	Back alignment and domain information

>PLN02620 indole-3-acetic acid-amido synthetase	Back alignment and domain information

>TIGR03335 F390_ftsA coenzyme F390 synthetase	Back alignment and domain information

>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase	Back alignment and domain information

>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]	Back alignment and domain information

>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]	Back alignment and domain information

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG	Back alignment and domain information

>PRK07656 long-chain-fatty-acid--CoA ligase; Validated	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		415
3a9u_A		536	Crystal Structures And Enzymatic Mechanisms Of A Po		1e-164
3tsy_A		979	4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr		1e-160
1ba3_A		550	Firefly Luciferase In Complex With Bromoform Length		5e-31
4g36_A		555	Photinus Pyralis Luciferase In The Adenylate-Formin		5e-31
3iep_A		551	Firefly Luciferase Apo Structure (P41 Form) Length		6e-31
3qya_A		582	Crystal Structure Of A Red-Emitter Mutant Of Lampyr		2e-30
4g37_A		555	Structure Of Cross-Linked Firefly Luciferase In Sec		4e-30
2d1q_A		548	Crystal Structure Of The Thermostable Japanese Fire		1e-29
2d1s_A		548	Crystal Structure Of The Thermostable Japanese Fire		3e-29
2d1t_A		548	Crystal Structure Of The Thermostable Japanese Fire		4e-29
3t5b_A		396	Crystal Structure Of N-Terminal Domain Of Facl13 Fr		2e-23
3r44_A		517	Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas		3e-23
1ult_A		541	Crystal Structure Of Tt0168 From Thermus Thermophil		6e-23
3g7s_A		549	Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li		2e-22
4fuq_A		503	Crystal Structure Of Apo Matb From Rhodopseudomonas		1e-20
1mdb_A		539	Crystal Structure Of Dhbe In Complex With Dhb-adeny		1e-16
2v7b_A		529	Crystal Structures Of A Benzoate Coa Ligase From Bu		2e-16
4gxr_A		503	Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len		3e-16
4gxq_A		506	Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer		3e-16
4fut_A		503	Crystal Structure Of Atp Bound Matb From Rhodopseud		4e-16
1md9_A		539	Crystal Structure Of Dhbe In Complex With Dhb And A		3e-15
3kxw_A		590	The Crystal Structure Of Fatty Acid Amp Ligase From		8e-15
3ipl_A		501	Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig		9e-15
3ivr_A		509	Crystal Structure Of Putative Long-Chain-Fatty-Acid		3e-14
2vsq_A		1304	Structure Of Surfactin A Synthetase C (Srfa-C), A N		4e-11
2qvx_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO		5e-10
3pbk_A		583	Structural And Functional Studies Of Fatty Acyl-Ade		1e-09
2qvz_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO		2e-09
1ry2_A		663	Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe		3e-09
3o82_A		544	Structure Of Base N-Terminal Domain From Acinetobac		3e-09
3nyq_A		505	Malonyl-Coa Ligase Ternary Product Complex With Met		7e-09
3cw8_X		504	4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb		7e-09
3dlp_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P,		7e-09
1t5d_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl		7e-09
1amu_A		563	Phenylalanine Activating Domain Of Gramicidin Synth		1e-08
2p2b_A		652	Acetyl-coa Synthetase, V386a Mutation Length = 652		2e-08
1pg3_A		652	Acetyl Coa Synthetase, Acetylated On Lys609 Length		6e-08
2p2j_A		652	Acetyl-Coa Synthetase, K609a Mutation Length = 652		6e-08
2p2f_A		652	Acetyl-coa Synthetase, Wild-type With Acetate, Amp,		6e-08
2p2m_A		652	Acetyl-Coa Synthetase, R194a Mutation Length = 652		6e-08
2p2q_A		652	Acetyl-Coa Synthetase, R584e Mutation Length = 652		6e-08
2p20_A		652	Acetyl-Coa Synthetase, R584a Mutation Length = 652		6e-08
1t5h_X		504	4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE		1e-07
3etc_A		580	2.1 A Structure Of Acyl-Adenylate Synthetase From M		1e-07
3rg2_A		617	Structure Of A Two-Domain Nrps Fusion Protein Conta		2e-07
4gr4_A		469	Crystal Structure Of Slgn1deltaasub Length = 469		4e-07
4gr5_A		570	Crystal Structure Of Slgn1deltaasub In Complex With		5e-07
2wd9_A		569	Crystal Structure Of Human Acyl-coa Synthetase Medi		1e-06
3b7w_A		570	Crystal Structure Of Human Acyl-Coa Synthetase Medi		1e-06
3l8c_A		521	Structure Of Probable D-Alanine--Poly(Phosphoribito		8e-05
3dhv_A		512	Crystal Structure Of Dlta Protein In Complex With D		1e-04
3fcc_A		512	Crystal Structure Of Dlta Protein In Complex With A		1e-04
3e53_A		480	Crystal Structure Of N-Terminal Domain Of A Fatty A		6e-04
3t5a_A		480	Crystal Structure Of N-Terminal Domain Of Faal28 G3		9e-04

>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536