Citrus Sinensis ID: 015084

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
MATRESIVVFTVLLMLILILLFIFIACKPWRFFFPSYRSRSIIKSGELERPLVSDDEALVRDQSNDLTRNYDLEGACYQNEGLWRSPRAQGLVHKQRLSSASPHATHGDSVVLDVISDASEDLSVGQTLKRPLMKDHLAEVQKYGGQEDQSPNLKLGLGIDRFPEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEVLFHTRFLLFLSL
cccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEcccccccccEEEcccccccEEEccccccccccEEEEcccccEEEEEEcccccccEEcccccccccccccccccccccccccEEEEcccEEEEEEccccccccccccccccccccHHHccccccccccEEEEcccccccccccEEEEEccccccHHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEcc
cccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccEEEEEcccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccEEEEEEEccccccEEEccccccccccEEEEccccccEEEccccccccEEEEEEccccEEEEEEEccccccEEEcccEccccccccccccccEEcccccEEEEEcEEEEEEEEEcccccccccccccccccccHcccccccccccEEEEEccccccccEEEEEEEcccccHHHHHHHHHHcHHHHHHHHcccccHcccccHccHHHHHHHHHHHHHHHHHccccccHEEEEEEEEcc
MATRESIVVFTVLLMLILILLFIFIAckpwrfffpsyrsrsiiksgelerplvsddealvrdqsndltrnydlegacyqneglwrspraqglvhkqrlssasphathgdsVVLDVISDasedlsvgqtlkrplmKDHLAEVQKyggqedqspnlklglgidrfpeflpkaiADQRSCLSlevvsgpsrgircsvqsanasrlpltlgrvspsdvllkdsevsgkhalinwnpnKLKWELVDMgslngtllnsqpinhpdsgsrhwgkpmeltsgdiitlgttSSIHVQitsetvsqipfgvgvasdpmalrrgakklpmedvcyyhwplpgvdkfglfgicdghggsaaaKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEVLFHTRFLLFLSL
MATRESIVVFTVLLMLILILLFIFIACKPWRFFFPSYRSRSIIKSgelerplvsddealvrdqsndltrnyDLEGACYQNEGLWRSPRAQGLVHKQRLssasphathgDSVVLDVISDASEDLSvgqtlkrplMKDHLAEVQKYggqedqspnlKLGLGIDRFPEFLPKAIADQRSCLSLEVVSGPSRGIRCSVqsanasrlpltlgrvspSDVLLKDsevsgkhalinwnpnKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITsetvsqipfgvgVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEVLFHTRFLLFLSL
MATRESivvftvllmlilillfifiACKPWRFFFPSYRSRSIIKSGELERPLVSDDEALVRDQSNDLTRNYDLEGACYQNEGLWRSPRAQGLVHKQRLSSASPHATHGDSVVLDVISDASEDLSVGQTLKRPLMKDHLAEVQKYGGQEDQSPNLKLGLGIDRFPEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDghggsaaaksasEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEVLFHTRFLLFLSL
*****SIVVFTVLLMLILILLFIFIACKPWRFFFPSYRSRSIIK**********************LTRNYDLEGACYQNEGLWR**************************VLDVI*************************************LKLGLGIDRFPEFLPKAIADQRSCLSLEVVSGPSRGIRCSV*******LPLTLGRV***DVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLL********************LTSGDIITLGTTSSIHVQITSETVSQIPFGVG******************DVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEVLFHTRFLLFL**
*****SI*VFTVLLMLILILLFIFIACKPWR*********************************************************************************LDVISDASE**********************************************************LEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVS**************************VCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSD**********CDASDVLRDAFFQTEASMNHHYEVLFHTRFLLFLSL
MATRESIVVFTVLLMLILILLFIFIACKPWRFFFPSYRSRSIIKSGELERPLVSDDEALVRDQSNDLTRNYDLEGACYQNEGLWRSPRAQ****************HGDSVVLDVISDASEDLSVGQTLKRPLMKDHLAEVQKYGGQEDQSPNLKLGLGIDRFPEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEVLFHTRFLLFLSL
**TRESIVVFTVLLMLILILLFIFIACKPWRFFFP*****************************************************AQGLVHKQRLSSASPHATHGDSVVLDVIS********************************************************QRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEVLFHTRFLLFLSL
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MATRESIVVFTVLLMLILILLFIFIACKPWRFFFPSYRSRSIIKSGELERPLVSDDEALVRDQSNDLTRNYDLEGACYQNEGLWRSPRAQGLVHKQRLSSASPHATHGDSVVLDVISDASEDLSVGQTLKRPLMKDHLAEVQKYGGQEDQSPNLKLGLGIDRFPEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVLRDAFFQTEASMNHHYEVLFHTRFLLFLSL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query413 2.2.26 [Sep-21-2011]
P46014 581 Protein phosphatase 2C 70 yes no 0.934 0.664 0.576 1e-128
Q54T01 958 Probable protein phosphat yes no 0.251 0.108 0.325 3e-08
Q4JVU0144 Oxoglutarate dehydrogenas yes no 0.237 0.680 0.347 0.0002
Q8NQJ3143 Oxoglutarate dehydrogenas yes no 0.169 0.489 0.389 0.0002
Q8FTJ5142 Oxoglutarate dehydrogenas yes no 0.169 0.492 0.389 0.0002
P0C219 858 Sarcolemmal membrane-asso yes no 0.324 0.156 0.301 0.0003
Q54WS9 1006 Probable protein phosphat no no 0.208 0.085 0.311 0.0004
Q6NHD4143 Oxoglutarate dehydrogenas yes no 0.200 0.580 0.346 0.0007
>sp|P46014|P2C70_ARATH Protein phosphatase 2C 70 OS=Arabidopsis thaliana GN=KAPP PE=1 SV=2 Back     alignment and function desciption
 Score =  458 bits (1178), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 225/390 (57%), Positives = 292/390 (74%), Gaps = 4/390 (1%)

Query: 25  IACKPWRFFFPSYRSRS---IIKSGELERPLVSDDEALVRDQSNDLTRNYDLEGACYQNE 81
            ACKPWR+F     S       K G+L+RPL+SDD  L++ Q++++TR YDLEGACYQN+
Sbjct: 26  FACKPWRYFSRFRSSSRFSSTFKVGDLQRPLISDDGNLIQGQTSEVTREYDLEGACYQND 85

Query: 82  GLWRSPRAQGLVHKQRLSSASPHATHGDSVVLDVISDASEDLSVGQTLKRPLMKDHLAEV 141
           GL  S   +G  +KQRL S+SPH + G+S VL+VIS+ S++  VGQTLK P  K  LAEV
Sbjct: 86  GLLHSSLTEGRFYKQRLPSSSPHFSQGESFVLEVISEPSDNALVGQTLKLPAEKGSLAEV 145

Query: 142 QKYGGQEDQSPNLKLGLGIDRFPEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASR 201
           Q Y  Q +++ NL+  L  DR     P+ + DQRS L LEV++GP+ G++ +V S ++S+
Sbjct: 146 QTYDWQNNRNENLQYNLEKDRLINLSPRLVEDQRSWLFLEVIAGPAIGLQHAVNSTSSSK 205

Query: 202 LPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSG 261
           LP+ LGRVSPSD+ LKDSEVSGKHA I WN  K KWELVDMGSLNGTL+NS  I+HPD G
Sbjct: 206 LPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDLG 265

Query: 262 SRHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMED 321
           SR WG P+EL S DIITLGTT+ ++V+I+S+   QIPF +GVASDPMA+RRG +KLPMED
Sbjct: 266 SRKWGNPVELASDDIITLGTTTKVYVRISSQNEFQIPFKIGVASDPMAMRRGGRKLPMED 325

Query: 322 VCYYHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDAS 381
           VC+Y WPLPG +KFGLF +CDGHGGS AA+SA +I+P+++A ILSDSL++E++LS+ DAS
Sbjct: 326 VCHYKWPLPGANKFGLFCVCDGHGGSGAAQSAIKIIPEVLANILSDSLRKEKVLSKRDAS 385

Query: 382 DVLRDAFFQTEASM-NHHYEVLFHTRFLLF 410
           DVLRD F +TEA +  H YE    T  L++
Sbjct: 386 DVLRDMFAKTEARLEEHQYEGCTATVLLVW 415
Dephosphorylates the Ser/Thr receptor-like kinase RLK5. May function as a signaling component in a pathway involving RLK5.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q54T01|Y2105_DICDI Probable protein phosphatase DDB_G0282105 OS=Dictyostelium discoideum GN=DDB_G0282105 PE=3 SV=1 Back     alignment and function description
>sp|Q4JVU0|ODHI_CORJK Oxoglutarate dehydrogenase inhibitor OS=Corynebacterium jeikeium (strain K411) GN=odhI PE=3 SV=1 Back     alignment and function description
>sp|Q8NQJ3|ODHI_CORGL Oxoglutarate dehydrogenase inhibitor OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=odhI PE=1 SV=1 Back     alignment and function description
>sp|Q8FTJ5|ODHI_COREF Oxoglutarate dehydrogenase inhibitor OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) GN=odhI PE=3 SV=1 Back     alignment and function description
>sp|P0C219|SLMAP_RAT Sarcolemmal membrane-associated protein OS=Rattus norvegicus GN=Slmap PE=2 SV=1 Back     alignment and function description
>sp|Q54WS9|Y9461_DICDI Probable protein phosphatase DDB_G0279461 OS=Dictyostelium discoideum GN=DDB_G0279461 PE=3 SV=2 Back     alignment and function description
>sp|Q6NHD4|ODHI_CORDI Oxoglutarate dehydrogenase inhibitor OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) GN=odhI PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
255552313 577 kinase associated protein phosphatase, p 0.917 0.656 0.704 1e-155
225432578 584 PREDICTED: protein phosphatase 2C 70 [Vi 0.973 0.688 0.677 1e-151
147790066 574 hypothetical protein VITISV_012193 [Viti 0.973 0.700 0.679 1e-151
224111242 582 predicted protein [Populus trichocarpa] 0.920 0.652 0.680 1e-144
169409940 576 kinase-associated protein phosphatase 1 0.900 0.645 0.658 1e-139
351722787 576 kinase-associated protein phosphatase 1 0.900 0.645 0.655 1e-138
148923087 597 kinase-associated protein phosphatase 1 0.920 0.636 0.606 1e-134
169409938 591 kinase-associated protein phosphatase [L 0.903 0.631 0.608 1e-129
351723269 578 kinase-associated protein phosphatase 2 0.905 0.647 0.628 1e-129
449481064 580 PREDICTED: protein phosphatase 2C 70-lik 0.905 0.644 0.617 1e-129
>gi|255552313|ref|XP_002517201.1| kinase associated protein phosphatase, putative [Ricinus communis] gi|223543836|gb|EEF45364.1| kinase associated protein phosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  553 bits (1426), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 272/386 (70%), Positives = 319/386 (82%), Gaps = 7/386 (1%)

Query: 25  IACKPWRFFFPSYRSRSIIKSGELERPLVSDDEALVRDQSNDLTRNYDLEGACYQNEGLW 84
           +ACKPWRFFF S  SR + K GELERPL+SDD      +SNDLTRNYDLEGACYQNEG  
Sbjct: 23  VACKPWRFFFSSSPSRPL-KVGELERPLISDDV-----ESNDLTRNYDLEGACYQNEGPL 76

Query: 85  RSPRAQGLVHKQRLSSASPHATHGDSVVLDVISDASEDLSVGQTLKRPLMKDHLAEVQKY 144
           R  R  GLVHKQRL SASPH   GDS++LDV+S+ +ED+SVGQTLKR  + +HLAEVQ++
Sbjct: 77  RLFRPHGLVHKQRLPSASPHLNQGDSLILDVVSEPAEDISVGQTLKRTSLTNHLAEVQQH 136

Query: 145 GGQEDQSPNLKLGLGIDRFPEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRLPL 204
            GQ DQSP L+  L  D   EF+P  IADQRSCLSLEV+SGPSRG+RCS++S +ASRLPL
Sbjct: 137 AGQTDQSPVLRSDLENDVVREFVPCVIADQRSCLSLEVISGPSRGLRCSIKSTSASRLPL 196

Query: 205 TLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRH 264
           TLGRVS SD+LLKDSEVSGKHA+INWN +K KWELVDMGSLNGTLLNSQPINH DSGSR 
Sbjct: 197 TLGRVS-SDLLLKDSEVSGKHAMINWNMDKKKWELVDMGSLNGTLLNSQPINHHDSGSRQ 255

Query: 265 WGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDVCY 324
           WG  ++L++GDIITLGTTS+I V +T +  ++ PFGVG+ASDPMALRRG KKL MEDVCY
Sbjct: 256 WGDAVDLSNGDIITLGTTSNIRVHVTLKAENETPFGVGMASDPMALRRGGKKLAMEDVCY 315

Query: 325 YHWPLPGVDKFGLFGICDGHGGSAAAKSASEILPKMVAAILSDSLKRERLLSQCDASDVL 384
           YHWPLPG+D+FG+FGICDGHGG AAA SAS++LP+ VA ILSDSL RER+LSQCDAS+VL
Sbjct: 316 YHWPLPGIDQFGVFGICDGHGGVAAANSASKMLPEKVARILSDSLTRERVLSQCDASEVL 375

Query: 385 RDAFFQTEASMNHHYEVLFHTRFLLF 410
           + AF QTEASMN++YE    T  L++
Sbjct: 376 KVAFSQTEASMNNYYEGCTATVLLVW 401

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225432578|ref|XP_002281192.1| PREDICTED: protein phosphatase 2C 70 [Vitis vinifera] gi|297737010|emb|CBI26211.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147790066|emb|CAN75988.1| hypothetical protein VITISV_012193 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224111242|ref|XP_002315790.1| predicted protein [Populus trichocarpa] gi|222864830|gb|EEF01961.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|169409940|gb|ACA57836.1| kinase-associated protein phosphatase 1 [Glycine max] Back     alignment and taxonomy information
>gi|351722787|ref|NP_001237000.1| kinase-associated protein phosphatase 1 [Glycine max] gi|169409934|gb|ACA57833.1| kinase-associated protein phosphatase 1 [Glycine max] Back     alignment and taxonomy information
>gi|148923087|gb|ABR18801.1| kinase-associated protein phosphatase 1 [Solanum peruvianum] Back     alignment and taxonomy information
>gi|169409938|gb|ACA57835.1| kinase-associated protein phosphatase [Lotus japonicus] gi|169409944|gb|ACA57838.1| kinase-associated protein phosphatase [Lotus japonicus] Back     alignment and taxonomy information
>gi|351723269|ref|NP_001237017.1| kinase-associated protein phosphatase 2 [Glycine max] gi|169409936|gb|ACA57834.1| kinase-associated protein phosphatase 2 [Glycine max] gi|169409942|gb|ACA57837.1| kinase-associated protein phosphatase 2 [Glycine max] Back     alignment and taxonomy information
>gi|449481064|ref|XP_004156071.1| PREDICTED: protein phosphatase 2C 70-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
TAIR|locus:2150220 591 KAPP "kinase associated protei 0.907 0.634 0.572 1.5e-113
UNIPROTKB|O49973 583 KAPP "FHA transcription factor 0.866 0.614 0.445 3.2e-72
TAIR|locus:2074557 585 AT3G02400 [Arabidopsis thalian 0.302 0.213 0.328 5.2e-05
TAIR|locus:2129785 386 AT4G14490 [Arabidopsis thalian 0.232 0.248 0.333 0.00075
UNIPROTKB|P64897162 garA "Glycogen accumulation re 0.169 0.432 0.376 0.00075
TAIR|locus:2150220 KAPP "kinase associated protein phosphatase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
 Identities = 217/379 (57%), Positives = 281/379 (74%)

Query:    26 ACKPWRFF--F-PSYRSRSIIKSGELERPLVSDDEALVRDQSNDLTRNYDLEGACYQNEG 82
             ACKPWR+F  F  S R  S  K G+L+RPL+SDD  L++ Q++++TR YDLEGACYQN+G
Sbjct:    27 ACKPWRYFSRFRSSSRFSSTFKVGDLQRPLISDDGNLIQGQTSEVTREYDLEGACYQNDG 86

Query:    83 LWRSPRAQGLVHKQRLSSASPHATHGDSVVLDVISDASEDLSVGQTLKRPLMKDHLAEVQ 142
             L  S   +G  +KQRL S+SPH + G+S VL+VIS+ S++  VGQTLK P  K  LAEVQ
Sbjct:    87 LLHSSLTEGRFYKQRLPSSSPHFSQGESFVLEVISEPSDNALVGQTLKLPAEKGSLAEVQ 146

Query:   143 KYGGQEDQSPNLKLGLGIDRFPEFLPKAIADQRSCLSLEVVSGPSRGIRCSVQSANASRL 202
              Y  Q +++ NL+  L  DR     P+ + DQRS L LEV++GP+ G++ +V S ++S+L
Sbjct:   147 TYDWQNNRNENLQYNLEKDRLINLSPRLVEDQRSWLFLEVIAGPAIGLQHAVNSTSSSKL 206

Query:   203 PLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGS 262
             P+ LGRVSPSD+ LKDSEVSGKHA I WN  K KWELVDMGSLNGTL+NS  I+HPD GS
Sbjct:   207 PVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSISHPDLGS 266

Query:   263 RHWGKPMELTSGDIITLGTTSSIHVQITSETVSQIPFGVGVASDPMALRRGAKKLPMEDV 322
             R WG P+EL S DIITLGTT+ ++V+I+S+   QIPF +GVASDPMA+RRG +KLPMEDV
Sbjct:   267 RKWGNPVELASDDIITLGTTTKVYVRISSQNEFQIPFKIGVASDPMAMRRGGRKLPMEDV 326

Query:   323 CYYHWPLPGVDKFGLFGICDXXXXXXXXXXXXEILPKMVAAILSDSLKRERLLSQCDASD 382
             C+Y WPLPG +KFGLF +CD            +I+P+++A ILSDSL++E++LS+ DASD
Sbjct:   327 CHYKWPLPGANKFGLFCVCDGHGGSGAAQSAIKIIPEVLANILSDSLRKEKVLSKRDASD 386

Query:   383 VLRDAFFQTEASMNHH-YE 400
             VLRD F +TEA +  H YE
Sbjct:   387 VLRDMFAKTEARLEEHQYE 405
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0007165 "signal transduction" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005886 "plasma membrane" evidence=IDA
GO:0000278 "mitotic cell cycle" evidence=RCA
GO:0006396 "RNA processing" evidence=RCA
GO:0016310 "phosphorylation" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0019901 "protein kinase binding" evidence=IPI
GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA
GO:0009934 "regulation of meristem structural organization" evidence=IMP
UNIPROTKB|O49973 KAPP "FHA transcription factor" [Zea mays (taxid:4577)] Back     alignment and assigned GO terms
TAIR|locus:2074557 AT3G02400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129785 AT4G14490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P64897 garA "Glycogen accumulation regulator GarA" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P46014P2C70_ARATH3, ., 1, ., 3, ., 1, 60.57690.93460.6643yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.914
3rd Layer3.1.30.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
pfam0049867 pfam00498, FHA, FHA domain 7e-16
cd00060102 cd00060, FHA, Forkhead associated domain (FHA); fo 5e-15
cd00143 254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 1e-12
COG1716191 COG1716, COG1716, FOG: FHA domain [Signal transduc 2e-10
smart00332 252 smart00332, PP2Cc, Serine/threonine phosphatases, 4e-10
smart0024052 smart00240, FHA, Forkhead associated domain 4e-08
pfam00481 252 pfam00481, PP2C, Protein phosphatase 2C 7e-07
COG0631 262 COG0631, PTC1, Serine/threonine protein phosphatas 5e-05
>gnl|CDD|215951 pfam00498, FHA, FHA domain Back     alignment and domain information 
 Score = 71.5 bits (176), Expect = 7e-16
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 10/77 (12%)

Query: 204 LTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSR 263
           +T+GR    D++L D  VS +HA I ++    ++ L D+GS NGT +N Q +        
Sbjct: 1   VTIGRSPDCDIVLDDPSVSRRHAEIRYDGG-GRFYLEDLGSTNGTFVNGQRLGP------ 53

Query: 264 HWGKPMELTSGDIITLG 280
              +P+ L  GD+I LG
Sbjct: 54  ---EPVRLRDGDVIRLG 67

The FHA (Forkhead-associated) domain is a phosphopeptide binding motif. Length = 67
>gnl|CDD|238017 cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins Back     alignment and domain information
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|224630 COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|214578 smart00240, FHA, Forkhead associated domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 413
PF0049868 FHA: FHA domain; InterPro: IPR000253 The forkhead- 99.7
KOG0697 379 consensus Protein phosphatase 1B (formerly 2C) [Si 99.67
KOG0698 330 consensus Serine/threonine protein phosphatase [Si 99.54
PLN03145 365 Protein phosphatase 2c; Provisional 99.52
cd00060102 FHA Forkhead associated domain (FHA); found in euk 99.5
PF00481 254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 99.44
TIGR03354 396 VI_FHA type VI secretion system FHA domain protein 99.43
KOG0699 542 consensus Serine/threonine protein phosphatase [Si 99.41
PLN02927668 antheraxanthin epoxidase/zeaxanthin epoxidase 99.4
PTZ00224 381 protein phosphatase 2C; Provisional 99.31
COG1716191 FOG: FHA domain [Signal transduction mechanisms] 99.29
KOG1881 793 consensus Anion exchanger adaptor protein Kanadapt 99.29
smart0024052 FHA Forkhead associated domain. Found in eukaryoti 99.21
KOG0700 390 consensus Protein phosphatase 2C/pyruvate dehydrog 99.06
COG3456 430 Predicted component of the type VI protein secreti 99.05
KOG1882293 consensus Transcriptional regulator SNIP1, contain 98.92
COG0631 262 PTC1 Serine/threonine protein phosphatase [Signal 98.88
KOG1323 493 consensus Serine/threonine phosphatase [Signal tra 98.84
cd00143 254 PP2Cc Serine/threonine phosphatases, family 2C, ca 98.77
smart00332 255 PP2Cc Serine/threonine phosphatases, family 2C, ca 98.65
KOG1880337 consensus Nuclear inhibitor of phosphatase-1 [Gene 98.56
PRK14559 645 putative protein serine/threonine phosphatase; Pro 98.54
TIGR02500 410 type_III_yscD type III secretion apparatus protein 98.21
KOG0615 475 consensus Serine/threonine protein kinase Chk2 and 97.78
KOG2293547 consensus Daxx-interacting protein MSP58/p78, cont 96.81
KOG0245 1221 consensus Kinesin-like protein [Cytoskeleton] 96.54
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 96.18
PF13672 212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 96.14
TIGR01663 526 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase 94.87
KOG1892 1629 consensus Actin filament-binding protein Afadin [C 94.51
KOG1379 330 consensus Serine/threonine protein phosphatase [Si 89.81
PRK15367 395 type III secretion system protein SsaD; Provisiona 88.78
PF15102146 TMEM154: TMEM154 protein family 85.05
KOG0241 1714 consensus Kinesin-like protein [Cytoskeleton] 83.44
>PF00498 FHA: FHA domain; InterPro: IPR000253 The forkhead-associated (FHA) domain [] is a phosphopeptide recognition domain found in many regulatory proteins Back     alignment and domain information 
Probab=99.70  E-value=6e-17  Score=125.59  Aligned_cols=68  Identities=38%  Similarity=0.728  Sum_probs=62.5

Q ss_pred             EEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCeecCCCCCCCCCCCCceecCCCCEEEEc
Q 015084          204 LTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLG  280 (413)
Q Consensus       204 ~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~i~~~~~~~r~~g~~~~L~~GD~I~lG  280 (413)
                      ++|||++.||++++++.||+.||.|.++.+ +.|+|+|++|+|||||||+++.+        ++++.|++||+|+||
T Consensus         1 ~~iGR~~~~di~l~~~~iSr~Ha~i~~~~~-~~~~i~d~~s~ngt~vng~~l~~--------~~~~~L~~gd~i~~G   68 (68)
T PF00498_consen    1 VTIGRSPDCDIVLPDPSISRRHARISFDDD-GQFYIEDLGSTNGTFVNGQRLGP--------GEPVPLKDGDIIRFG   68 (68)
T ss_dssp             EEEESSTTSSEEETSTTSSTTSEEEEEETT-EEEEEEESSSSS-EEETTEEESS--------TSEEEE-TTEEEEET
T ss_pred             CEEcCCCCCCEEECCHheeeeeeEEEEece-eeEEEEeCCCCCcEEECCEEcCC--------CCEEECCCCCEEEcC
Confidence            589999999999999999999999999997 57999999999999999999997        678999999999998

It displays specificity for phosphothreonine-containing epitopes but will also recognise phosphotyrosine with relatively high affinity. It spans approximately 80-100 amino acid residues folded into an 11-stranded beta sandwich, which sometimes contain small helical insertions between the loops connecting the strands []. To date, genes encoding FHA-containing proteins have been identified in eubacterial and eukaryotic but not archaeal genomes. The domain is present in a diverse range of proteins, such as kinases, phosphatases, kinesins, transcription factors, RNA-binding proteins and metabolic enzymes which partake in many different cellular processes - DNA repair, signal transduction, vesicular transport and protein degradation are just a few examples.; GO: 0005515 protein binding; PDB: 1LGQ_B 1LGP_A 2CSW_A 2PIE_A 3FM8_A 3MDB_B 3GQS_B 1UHT_A 1WLN_A 3POA_A ....
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>cd00060 FHA Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>TIGR03354 VI_FHA type VI secretion system FHA domain protein Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG1716 FOG: FHA domain [Signal transduction mechanisms] Back     alignment and domain information
>KOG1881 consensus Anion exchanger adaptor protein Kanadaptin, contains FHA domain [General function prediction only] Back     alignment and domain information
>smart00240 FHA Forkhead associated domain Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>COG3456 Predicted component of the type VI protein secretion system, contains a FHA domain [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] Back     alignment and domain information
>KOG1882 consensus Transcriptional regulator SNIP1, contains FHA domain [Signal transduction mechanisms] Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1880 consensus Nuclear inhibitor of phosphatase-1 [General function prediction only] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>TIGR02500 type_III_yscD type III secretion apparatus protein, YscD/HrpQ family Back     alignment and domain information
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG2293 consensus Daxx-interacting protein MSP58/p78, contains FHA domain [Transcription; Signal transduction mechanisms] Back     alignment and domain information
>KOG0245 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase Back     alignment and domain information
>KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK15367 type III secretion system protein SsaD; Provisional Back     alignment and domain information
>PF15102 TMEM154: TMEM154 protein family Back     alignment and domain information
>KOG0241 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
1mzk_A139 Nmr Structure Of Kinase-Interacting Fha Domain Of K 2e-46
2kb3_A143 Nmr Structure Of The Phosphorylated Form Of Odhi, P 2e-05
2kb4_A143 Nmr Structure Of The Unphosphorylated Form Of Odhi, 2e-05
2kkl_A140 Solution Nmr Structure Of Fha Domain Of Mb1858 From 1e-04
1uht_A118 Solution Structure Of The Fha Domain Of Arabidopsis 1e-04
2kfu_A162 Pknb-Phosphorylated Rv1827 Length = 162 2e-04
>pdb|2KB3|A Chain A, Nmr Structure Of The Phosphorylated Form Of Odhi, Podhi Length = 143 Back     alignment and structure
>pdb|2KB4|A Chain A, Nmr Structure Of The Unphosphorylated Form Of Odhi, Odhi Length = 143 Back     alignment and structure
>pdb|2KKL|A Chain A, Solution Nmr Structure Of Fha Domain Of Mb1858 From Mycobacterium Bovis. Northeast Structural Genomics Consortium Target Mbr243c (24-155) Length = 140 Back     alignment and structure
>pdb|1UHT|A Chain A, Solution Structure Of The Fha Domain Of Arabidopsis Thaliana Hypothetical Protein Length = 118 Back     alignment and structure
>pdb|2KFU|A Chain A, Pknb-Phosphorylated Rv1827 Length = 162 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
1mzk_A139 Kinase associated protein phosphatase; beta sandwi 2e-46
1uht_A118 Expressed protein; FHA domain, beta-sandwich, anti 2e-23
2xt9_B115 Putative signal transduction protein GARA; lyase-s 5e-17
3gqs_A106 Adenylate cyclase-like protein; FHA domain, struct 9e-17
2kb3_A143 Oxoglutarate dehydrogenase inhibitor; forkhead-ass 1e-16
2kfu_A162 RV1827 PThr 22; FHA domain, phosphorylation, intra 1e-16
1r21_A128 Antigen KI-67; beta sandwich, cell cycle; NMR {Hom 7e-16
3po8_A100 RV0020C protein, putative uncharacterized protein 2e-15
3va4_A132 Mediator of DNA damage checkpoint protein 1; cell 4e-15
3oun_A157 Putative uncharacterized protein TB39.8; peptidogl 9e-15
2jqj_A151 DNA damage response protein kinase DUN1; protein/p 1e-14
2csw_A145 Ubiquitin ligase protein RNF8; 11-stranded beta sa 1e-12
1g6g_A127 Protein kinase RAD53; beta-sandwich, phosphopeptid 3e-12
2jpe_A140 Nuclear inhibitor of protein phosphatase 1; FHA do 3e-12
1g3g_A164 Protien kinase SPK1; FHA domain, RAD53, phosphopep 3e-12
2pie_A138 E3 ubiquitin-protein ligase RNF8; FHA domain, comp 3e-12
1lgp_A116 Cell cycle checkpoint protein CHFR; FHA, tungstate 6e-12
3hx1_A131 SLR1951 protein; P74513_SYNY3, adenylate cyclase-l 3e-11
3els_A158 PRE-mRNA leakage protein 1; intrinsically unstruct 4e-10
3elv_A205 PRE-mRNA leakage protein 1; intrinsically unstruct 1e-09
2i44_A 324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-09
1gxc_A149 CHK2, CDS1, serine/threonine-protein kinase CHK2; 7e-09
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 8e-09
4da1_A 389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-08
2iq1_A 274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-08
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 4e-08
2p8e_A 307 PPM1B beta isoform variant 6; structural genomics, 6e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1dmz_A158 Protein (protein kinase SPK1); beta-sandwich, anti 2e-07
1qu5_A182 Protein kinase SPK1; FHA, RAD53, transferase; NMR 3e-07
2i0o_A 304 Ser/Thr phosphatase; beta sandwich, structural gen 4e-07
2irm_A 358 Mitogen-activated protein kinase kinase kinase 7 i 7e-07
3fm8_A124 Kinesin-like protein KIF13B; kinesin, GAP, GTPase 1e-06
3kdj_B 316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-06
3qn1_B 337 Protein phosphatase 2C 16; start domain, BET V dom 7e-06
1wln_A120 Afadin; beta sandwich, FHA domain, structural geno 1e-05
2isn_A 364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 2e-05
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-04
3huf_A325 DNA repair and telomere maintenance protein NBS1; 2e-04
3i6u_A 419 CDS1, serine/threonine-protein kinase CHK2; Ser/Th 2e-04
2g1l_A104 Kinesin-like protein KIF1C; transport, FHA domain, 6e-04
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2 Length = 118 Back     alignment and structure
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis} Length = 115 Back     alignment and structure
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis} Length = 106 Back     alignment and structure
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A Length = 143 Back     alignment and structure
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A Length = 162 Back     alignment and structure
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A* Length = 128 Back     alignment and structure
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} PDB: 3poa_A* 2lc1_A Length = 100 Back     alignment and structure
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B Length = 132 Back     alignment and structure
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis} Length = 157 Back     alignment and structure
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A* Length = 151 Back     alignment and structure
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2 Length = 145 Back     alignment and structure
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2 Length = 127 Back     alignment and structure
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus} Length = 140 Back     alignment and structure
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A* Length = 164 Back     alignment and structure
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2 Length = 138 Back     alignment and structure
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A Length = 116 Back     alignment and structure
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP} Length = 131 Back     alignment and structure
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae} Length = 158 Back     alignment and structure
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A Length = 205 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2 Length = 149 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A* Length = 158 Back     alignment and structure
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 Length = 182 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A* Length = 124 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2 Length = 120 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A* Length = 325 Back     alignment and structure
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 Back     alignment and structure
>2g1l_A Kinesin-like protein KIF1C; transport, FHA domain, structural genomics consortium, kines transport protein; 2.60A {Homo sapiens} SCOP: b.26.1.2 Length = 104 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
1mzk_A139 Kinase associated protein phosphatase; beta sandwi 99.92
4h87_A130 Kanadaptin; FHA domain of PF00498, mRNA processing 99.88
3gqs_A106 Adenylate cyclase-like protein; FHA domain, struct 99.85
1uht_A118 Expressed protein; FHA domain, beta-sandwich, anti 99.83
3va4_A132 Mediator of DNA damage checkpoint protein 1; cell 99.83
2xt9_B115 Putative signal transduction protein GARA; lyase-s 99.82
2jpe_A140 Nuclear inhibitor of protein phosphatase 1; FHA do 99.81
2kb3_A143 Oxoglutarate dehydrogenase inhibitor; forkhead-ass 99.81
3po8_A100 RV0020C protein, putative uncharacterized protein 99.8
1r21_A128 Antigen KI-67; beta sandwich, cell cycle; NMR {Hom 99.79
2kfu_A162 RV1827 PThr 22; FHA domain, phosphorylation, intra 99.79
3hx1_A131 SLR1951 protein; P74513_SYNY3, adenylate cyclase-l 99.77
3oun_A157 Putative uncharacterized protein TB39.8; peptidogl 99.75
1lgp_A116 Cell cycle checkpoint protein CHFR; FHA, tungstate 99.74
3els_A158 PRE-mRNA leakage protein 1; intrinsically unstruct 99.74
1dmz_A158 Protein (protein kinase SPK1); beta-sandwich, anti 99.73
1qu5_A182 Protein kinase SPK1; FHA, RAD53, transferase; NMR 99.73
1g3g_A164 Protien kinase SPK1; FHA domain, RAD53, phosphopep 99.73
3elv_A205 PRE-mRNA leakage protein 1; intrinsically unstruct 99.71
2jqj_A151 DNA damage response protein kinase DUN1; protein/p 99.71
2pie_A138 E3 ubiquitin-protein ligase RNF8; FHA domain, comp 99.71
1gxc_A149 CHK2, CDS1, serine/threonine-protein kinase CHK2; 99.7
2csw_A145 Ubiquitin ligase protein RNF8; 11-stranded beta sa 99.69
1wln_A120 Afadin; beta sandwich, FHA domain, structural geno 99.69
1g6g_A127 Protein kinase RAD53; beta-sandwich, phosphopeptid 99.68
2ff4_A388 Probable regulatory protein EMBR; winged-helix, te 99.61
4ejq_A154 Kinesin-like protein KIF1A; homodimer, FHA domain, 99.52
3fm8_A124 Kinesin-like protein KIF13B; kinesin, GAP, GTPase 99.51
4a0e_A123 YSCD, type III secretion protein; transport protei 99.46
2isn_A 364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 99.44
3qn1_B 337 Protein phosphatase 2C 16; start domain, BET V dom 99.42
3kdj_B 316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 99.41
3huf_A325 DNA repair and telomere maintenance protein NBS1; 99.36
4da1_A 389 Protein phosphatase 1K, mitochondrial; metal-ION-a 99.36
2i0o_A 304 Ser/Thr phosphatase; beta sandwich, structural gen 99.34
2irm_A 358 Mitogen-activated protein kinase kinase kinase 7 i 99.33
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 99.31
2p8e_A 307 PPM1B beta isoform variant 6; structural genomics, 99.3
3d8k_A 377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 99.3
2i44_A 324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 99.29
2j4o_A 401 Mitogen-activated protein kinase kinase kinase 7-i 99.27
2iq1_A 274 Protein phosphatase 2C kappa, PPM1K; structural ge 99.26
1a6q_A 382 Phosphatase 2C; catalytic mechanism, metalloenzyme 99.25
3kt9_A102 Aprataxin; FHA domain, beta sandwich, beta sheet, 99.19
3uv0_A102 Mutator 2, isoform B; FHA, protein binding, dimeri 99.19
3i6u_A 419 CDS1, serine/threonine-protein kinase CHK2; Ser/Th 99.12
2brf_A110 Bifunctional polynucleotide phosphatase/kinase; hy 99.06
1txo_A 237 Putative bacterial enzyme; serine/threonine protei 99.04
2pk0_A 250 Serine/threonine protein phosphatase STP1; SI moti 98.97
2j82_A 240 TPPHA, protein serine-threonine phosphatase; PP2C 98.92
1yj5_C143 5' polynucleotide kinase-3' phosphatase FHA domai; 98.87
1ujx_A119 Polynucleotide kinase 3'-phosphatase; DNA repair, 98.82
4egx_A184 Kinesin-like protein KIF1A; FHA domain, transport 98.81
2jfr_A 234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 98.72
1wv3_A238 Similar to DNA segregation ATPase and related prot 98.69
3rnr_A 211 Stage II sporulation E family protein; structural 98.13
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens} Back     alignment and structure
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis} Back     alignment and structure
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2 Back     alignment and structure
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B Back     alignment and structure
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis} Back     alignment and structure
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus} Back     alignment and structure
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A Back     alignment and structure
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A Back     alignment and structure
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A* Back     alignment and structure
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A Back     alignment and structure
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP} Back     alignment and structure
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis} Back     alignment and structure
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A Back     alignment and structure
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A* Back     alignment and structure
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 Back     alignment and structure
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A* Back     alignment and structure
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A Back     alignment and structure
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A* Back     alignment and structure
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2 Back     alignment and structure
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2 Back     alignment and structure
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2 Back     alignment and structure
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2 Back     alignment and structure
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2 Back     alignment and structure
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A* Back     alignment and structure
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A Back     alignment and structure
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A* Back     alignment and structure
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A* Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0 Back     alignment and structure
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster} Back     alignment and structure
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Back     alignment and structure
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A* Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2 Back     alignment and structure
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2 Back     alignment and structure
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens} Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 413
d1mzka_122 b.26.1.2 (A:) Kinase associated protein phosphatas 1e-32
d1uhta_118 b.26.1.2 (A:) FHA domain containing protein At4G14 9e-16
d2ff4a399 b.26.1.2 (A:284-382) Probable regulatory protein E 2e-09
d1dmza_158 b.26.1.2 (A:) Phosphotyrosine binding domain of Ra 5e-09
d1a6qa2 295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 1e-08
d2affa198 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapi 4e-08
d1g6ga_127 b.26.1.2 (A:) Phosphotyrosine binding domain of Ra 1e-06
d2g1la1102 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {H 1e-06
d1gxca_116 b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [T 3e-06
d1wlna1107 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [T 4e-06
d1txoa_ 235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-05
d1lgpa_113 b.26.1.2 (A:) Cell cycle checkpoint protein Chfr { 0.004
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 122 Back     information, alignment and structure

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Kinase associated protein phosphatase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  117 bits (294), Expect = 1e-32
 Identities = 76/118 (64%), Positives = 96/118 (81%)

Query: 176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKL 235
           S L LEV++GP+ G++ +V S ++S+LP+ LGRVSPSD+ LKDSEVSGKHA I WN  K 
Sbjct: 4   SWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKF 63

Query: 236 KWELVDMGSLNGTLLNSQPINHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSET 293
           KWELVDMGSLNGTL+NS  I+HPD GSR WG P+EL S DIITLGTT+ ++V+I+S+ 
Sbjct: 64  KWELVDMGSLNGTLVNSHSISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQN 121
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 118 Back     information, alignment and structure
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 99 Back     information, alignment and structure
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 158 Back     information, alignment and structure
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]} Length = 98 Back     information, alignment and structure
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 127 Back     information, alignment and structure
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]} Length = 102 Back     information, alignment and structure
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 116 Back     information, alignment and structure
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]} Length = 107 Back     information, alignment and structure
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure
>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]} Length = 113 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
d1mzka_122 Kinase associated protein phosphatase {Thale cress 99.9
d1uhta_118 FHA domain containing protein At4G14490 {Thale cre 99.85
d2ff4a399 Probable regulatory protein EmbR, C-terminal domai 99.8
d2affa198 Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]} 99.76
d1lgpa_113 Cell cycle checkpoint protein Chfr {Human (Homo sa 99.68
d1dmza_158 Phosphotyrosine binding domain of Rad53 {Baker's y 99.67
d2piea1127 Ubiquitin ligase protein RNF8 {Human (Homo sapiens 99.65
d1gxca_116 Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]} 99.64
d2brfa1101 Polynucleotide kinase 3'-phosphatase {Human (Homo 99.64
d1g6ga_127 Phosphotyrosine binding domain of Rad53 {Baker's y 99.62
d1a6qa2 295 Protein serine/threonine phosphatase 2C, catalytic 99.6
d2g1la1102 Kinesin-like protein kif1c {Human (Homo sapiens) [ 99.53
d1wlna1107 Afadin {Mouse (Mus musculus) [TaxId: 10090]} 99.52
d1txoa_ 235 putative serine/threonine phosphatase pstp/ppp {My 99.12
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Kinase associated protein phosphatase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=9.3e-24  Score=180.21  Aligned_cols=118  Identities=64%  Similarity=1.056  Sum_probs=106.5

Q ss_pred             ceEEEEEEeCCCCCeEEEeccCCCCCCcEEeCCCCCCCeEeCCcccccceeEEEEeCCcceEEEEEcCCCCceeeCCeec
Q 015084          176 SCLSLEVVSGPSRGIRCSVQSANASRLPLTLGRVSPSDVLLKDSEVSGKHALINWNPNKLKWELVDMGSLNGTLLNSQPI  255 (413)
Q Consensus       176 ~~~~L~vi~G~~~g~~~~L~~~~~~~~~~~IGR~~~~divl~d~~VSr~HA~I~~~~~~~~~~L~DlgStNGT~VNg~~i  255 (413)
                      +++.|+|++||..|..+.+......+.+++|||.+.||++|+|+.||+.||+|.++.+++.|+|+|++|+|||||||+++
T Consensus         4 ~~l~L~vi~Gp~~g~~~~l~~~~~~~~~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~~~~~~v~DlgS~nGT~vNg~~i   83 (122)
T d1mzka_           4 SWLFLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNSHSI   83 (122)
T ss_dssp             EEEEEEECSSTTCSCEEEECTTCSTTCSEEEESSSSCSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETTEES
T ss_pred             ceEEEEEEECCCCCcEEEecCCCCCcCCEEecCCCCCCEEECCCCcCccceEEEEeCCCCEEEEeeCCCCCceEECCEEC
Confidence            58999999999999999998877777789999999999999999999999999998766799999999999999999999


Q ss_pred             CCCCCCCCCCCCceecCCCCEEEEcceeEEEEeeeccc
Q 015084          256 NHPDSGSRHWGKPMELTSGDIITLGTTSSIHVQITSET  293 (413)
Q Consensus       256 ~~~~~~~r~~g~~~~L~~GD~I~lG~~~~~~~~~~~~~  293 (413)
                      .........+|++++|++||+|+||.+++.++.+..++
T Consensus        84 ~~~~~~~~~~g~~~~L~~gd~i~iG~~~~~~v~~~~~~  121 (122)
T d1mzka_          84 SHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQN  121 (122)
T ss_dssp             SCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEECC
T ss_pred             cccccccccCCceEEcCCCCEEEECCeEEEEEEEecCC
Confidence            86544555668899999999999999999999887643
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure