Citrus Sinensis ID: 015117

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
Protein Sequence
MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEcccccccHcccccccccccccccc
Coil and Loop (DISEMBL)
miecsvchstleletvggktvsraydrhrhqvsskTRFLNVALVVGDCILVGLQPILVFttkvdggfkfspvSVNFLTEAVKVFFAIVMLLLQARHKKvgeksllsfstiAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVnqlrslpegtsalglpvatgaYLYTLIFVTVPSLASVFNeyalksqydtsiyhqnlfLYGYGAIFNFLGIVITAmfkgpssfdilqgHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMhqffsplskvkdepknislesvdspknkrskdtsfigmaaganedashravneekapllpi
Flexible Loop (DISEMBL)
miecsvchstleletvggkTVSRAYDRHrhqvssktrflNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIslesvdspknkrskdTSFIGMAAganedashravneekapllpi
Low Complexity Region (SEG)
MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI
Disordered region (IsUnstruct)
****SVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP*******************************************************
Disordered Region (DISOPRED)
**************************************LNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLP****ALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF**********************************************************
Disordered Region (DISEMBL)
MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLES*********KDTSFIGMAAGA*******************
Disordered Region (DISPRO)
MIECSVCHSTLELETVGGKTVSRAYD*HRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLP******GLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS*****************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	413	2.2.26 [Sep-21-2011]
Q9C5H6	405	CMP-sialic acid transport	yes	no	0.963	0.982	0.746	1e-177
Q8GY97	406	CMP-sialic acid transport	no	no	0.966	0.982	0.746	1e-175
Q8LGE9	340	CMP-sialic acid transport	no	no	0.728	0.885	0.285	1e-34
F4JN00	352	CMP-sialic acid transport	no	no	0.685	0.803	0.306	3e-29
A0JMG9	314	Probable UDP-sugar transp	yes	no	0.535	0.703	0.289	2e-19
Q6DCG9	413	Probable UDP-sugar transp	N/A	no	0.784	0.784	0.246	4e-19
Q90X48	440	Probable UDP-sugar transp	no	no	0.796	0.747	0.249	1e-18
A4IHW3	321	Probable UDP-sugar transp	no	no	0.738	0.950	0.258	3e-18
Q9R0M8	390	UDP-galactose translocato	yes	no	0.559	0.592	0.285	1e-14
Q93890	368	UDP-galactose/UDP-N-acety	yes	no	0.685	0.769	0.242	2e-14

>sp|Q9C5H6|CSTR3_ARATH CMP-sialic acid transporter 3 OS=Arabidopsis thaliana GN=UTR6 PE=2 SV=1

 Score =  620 bits (1599), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 306/410 (74%), Positives = 348/410 (84%), Gaps = 12/410 (2%)

Query: 3   ECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTK 62
           EC  CHS  +L + G KT+SRAYD H+ +VSSK R LNV LVVGDC+LVGLQP+LV+ +K
Sbjct: 7   ECPACHS--KLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLVYMSK 64

Query: 63  VDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQ 122
           VDG F FSP+SVNFLTE  KV FAIVMLL+QARH+KVGEK LLS ST           +Q
Sbjct: 65  VDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVST----------FVQ 114

Query: 123 AARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSII 182
           AARNNVLLAVPA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK++MKRRFSII
Sbjct: 115 AARNNVLLAVPALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSII 174

Query: 183 QWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQ 242
           QWEALALLLIGISVNQLRSLPEG +A+G+P+ATGAY+ T+IFVTVPS+ASVFNEYALKSQ
Sbjct: 175 QWEALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKSQ 234

Query: 243 YDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILS 302
           YDTSIY QNLFLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQGILS
Sbjct: 235 YDTSIYLQNLFLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILS 294

Query: 303 SFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV 362
           SFFFKYADTILKKYSSTVATIFTG+ASAALFGH +TMNF+LGISIVFISMHQFFSPL+K 
Sbjct: 295 SFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQFFSPLAKA 354

Query: 363 KDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 412
           +DE +      + + K+    + SFI MAAGANE+ASHR  ++++ PLLP
Sbjct: 355 RDEQQQNGNLELGNTKDTHRANESFINMAAGANEEASHRGESDDRTPLLP 404

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY97|CSTR2_ARATH CMP-sialic acid transporter 2 OS=Arabidopsis thaliana GN=At2g43240 PE=2 SV=1

 Score =  613 bits (1582), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 309/414 (74%), Positives = 348/414 (84%), Gaps = 15/414 (3%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRH--QVSSKTRFLNVALVVGDCILVGLQPILV 58
           M ECSVC S   L +   K +SRAYD + +  +VSSK R LNV LVVGDC+LVGLQP+LV
Sbjct: 5   MAECSVCRS--RLVSPSSKAISRAYDNYNYKIRVSSKQRALNVFLVVGDCMLVGLQPVLV 62

Query: 59  FTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISF 118
           + +KVDG F FSP+SVNFLTE  KV FA+VMLL QARH+KVGEK LLS ST         
Sbjct: 63  YMSKVDGKFNFSPISVNFLTEIAKVIFAMVMLLFQARHQKVGEKPLLSLST--------- 113

Query: 119 ILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRR 178
             +QAARNN+LLAVPA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK+IMKRR
Sbjct: 114 -FVQAARNNMLLAVPAGLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMIMKRR 172

Query: 179 FSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 238
           FSIIQWEALALLLIGIS+NQLRSLPEG + + +P+ATGAY+ T IFVTVPSLASV+NEYA
Sbjct: 173 FSIIQWEALALLLIGISINQLRSLPEGATTVAVPIATGAYICTFIFVTVPSLASVYNEYA 232

Query: 239 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQ 298
           LKSQYDTSIY QNLFLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQ
Sbjct: 233 LKSQYDTSIYLQNLFLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQ 292

Query: 299 GILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 358
           GILSSFFFKYADTILKKYSSTVATIFTG+ASAALFGH LTMNF+LGISIVFISMHQFFSP
Sbjct: 293 GILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHILTMNFLLGISIVFISMHQFFSP 352

Query: 359 LSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 412
           LSK KDE +N ++E VD+    R+KD SFI MAAGA E+ASHR  ++++ PLLP
Sbjct: 353 LSKAKDEQQNGNIELVDAKDGHRAKD-SFINMAAGATEEASHRIESDDRVPLLP 405

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LGE9|CSTR1_ARATH CMP-sialic acid transporter 1 OS=Arabidopsis thaliana GN=At5g41760 PE=2 SV=1

 Score =  147 bits (372), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 162/322 (50%), Gaps = 21/322 (6%)

Query: 49  ILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFS 108
           IL   Q IL   ++ DGG+K+   +V FL E  K+  +                 L  + 
Sbjct: 15  ILTSSQGILTTLSQSDGGYKYDYATVPFLAEVFKLIIS----------------GLFLWR 58

Query: 109 TIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIA 168
            +      +  +    ++  L  +P+ +Y I+N ++F    Y + +T +++ NLK+    
Sbjct: 59  EMRTSSSTTSRITTDWKSVRLFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTG 118

Query: 169 LLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVP 228
           +L ++ +KR+ S +QW A+ LL +G + +Q++   E +           YL  ++   + 
Sbjct: 119 ILFRLFLKRKLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLS 178

Query: 229 SLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVIT----AMFKGPSSFDILQGH 284
           +LA ++ E+ +K   DT +Y QNL LY +G++FN   ++         KGP    I  G+
Sbjct: 179 ALAGIYTEFLMKRNNDT-LYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGY 237

Query: 285 SKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILG 344
           S  T L++ N  + G+L S+  KYAD I+K YS+++A + T +AS  LF    T+   LG
Sbjct: 238 SITTWLVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLG 297

Query: 345 ISIVFISMHQFFSPLSKVKDEP 366
           I I  +S+H +F+P   + D P
Sbjct: 298 IVICIMSLHMYFAPPHTLVDLP 319

Essential protein. Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.

Arabidopsis thaliana (taxid: 3702)

>sp|F4JN00|CSTR4_ARATH CMP-sialic acid transporter 4 OS=Arabidopsis thaliana GN=At4g35335 PE=2 SV=1

 Score =  129 bits (325), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 151/307 (49%), Gaps = 24/307 (7%)

Query: 49  ILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLS-- 106
           IL   Q IL+  +K  G +++S  + NFL   +K   +++ L    +++ V + + LS  
Sbjct: 60  ILTSSQAILIVWSKRAGKYEYSVTTANFLVGTLKCALSLLALTRIWKNEGVTDDNRLSTT 119

Query: 107 FSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFV 166
           F  +   P+                 PA LY   N L++ +  Y +    ++L NL +  
Sbjct: 120 FDEVKVFPI-----------------PAALYLFKNLLQYYIFAYVDAPGYQILKNLNIIS 162

Query: 167 IALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVT 226
             +L +II+KR+ S IQW    LL  G +  QL S  +      LP  T A +  L+   
Sbjct: 163 TGVLYRIILKRKLSEIQWAGFILLCCGCTTAQLNSNSDRVLQTSLPGWTMAIVMALL--- 219

Query: 227 VPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSK 286
               A V+ E  +K +   +I  QN +LY +G  FN + IVI   F   ++     G+S 
Sbjct: 220 -SGFAGVYTEAIIKKRPSRNINVQNFWLYVFGMAFNAVAIVIQD-FDAVANKGFFHGYSF 277

Query: 287 ATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGIS 346
            T+L+I N+A  GI  S   KYAD I+K YS++VA + T + S  LF   L++ F LG +
Sbjct: 278 ITLLMILNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGST 337

Query: 347 IVFISMH 353
           +V +S++
Sbjct: 338 VVSVSVY 344

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi (By similarity). Essential protein.

Arabidopsis thaliana (taxid: 3702)

>sp|A0JMG9|S35A4_DANRE Probable UDP-sugar transporter protein SLC35A4 OS=Danio rerio GN=slc35a4 PE=2 SV=1

 Score = 97.4 bits (241), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 7/228 (3%)

Query: 131 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 190
           AVPA LYA NN+L   MQ Y +P++ ++LSNLK+   ALL    + +R    QW A+ LL
Sbjct: 93  AVPAVLYAFNNHLVVFMQAYMDPSSFQVLSNLKIASTALLYTSCLGKRLHRRQWFAMGLL 152

Query: 191 L-IGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYH 249
           +  G+S +      EG     + + +   L  L++  V  LA+V+ E  LKSQ    +  
Sbjct: 153 VSAGVSHSCFSYDLEGKRETAVYITSWGLLLVLVYCFVSGLAAVYTERVLKSQ-RLPLSM 211

Query: 250 QNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYA 309
           QNLFLY +G + N     + +   G       +G+S    +++    A G+L S   K+ 
Sbjct: 212 QNLFLYTFGVVVN-----LASHLSGGEQKGFFEGYSAVVWVIVAGQVANGLLMSVVMKHG 266

Query: 310 DTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS 357
             I + +  + A +   + S  + G  LT  F+  + ++  +++ +++
Sbjct: 267 TGITRLFVISSAMLVNAVLSWGILGVQLTGYFLFPVVLIGWAVYLYYT 314

Danio rerio (taxid: 7955)

>sp|Q6DCG9|S35A5_XENLA Probable UDP-sugar transporter protein SLC35A5 OS=Xenopus laevis GN=slc35a5 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 163/386 (42%), Gaps = 62/386 (16%)

Query: 59  FTTKVDGGFKFSPVSVNFLTEAVKVFFAIVM---LLLQARHKKVGEKSLLSFSTIAQMPV 115
           F+   D  + + P +VN   EAVK+ F + M   +++  R       SL  F    +   
Sbjct: 39  FSANEDNKYDYVPATVNVCAEAVKLLFCMAMSVRIIMTERRSFRCHASLKHFCQYMKW-- 96

Query: 116 ISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIM 175
                          AVPAFLY ++N + F +  Y  PA   +LSN  +   A+  ++I+
Sbjct: 97  ---------------AVPAFLYFLDNLIIFYVLAYLQPAMAVLLSNFVIITTAVFFRLIL 141

Query: 176 KRRFSIIQWEALALLLIGI----SVNQ--------------LRSLPEGTSA-LGLP---- 212
           KR+ S +QW +L +L + I    S N                 S P  +   L  P    
Sbjct: 142 KRQLSCVQWASLVILFLSIMGLTSRNDTAHHEVSVDVHHHLFHSAPSNSCTYLNKPDTEA 201

Query: 213 -------VATGAYLY-------TLIFVTVPSLASVFNEYALK--SQYDTSIYHQNLFLYG 256
                  +A   +L+        L+   + +LA+++NE  LK   Q   SI+ QN  LY 
Sbjct: 202 HTVSLKAIANFQFLHLGLGHFLILLQCVISALANIYNEKILKEGEQMSESIFIQNSKLYV 261

Query: 257 YGAIFNFLGIVI-TAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKK 315
           +G  FN L +V+    F    S     GH+  ++ LI   A  G+  +F  K+ D +   
Sbjct: 262 FGVFFNGLTLVLHDEYFSKIKSCGFFYGHNGFSVALIFTTAFVGLSVAFILKFRDNMFHV 321

Query: 316 YSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF-FSPLSKVKDEPKNISLESV 374
            ++ + T+   + S  +F    +++F L   +V +S+  +  S +++     K   L+ +
Sbjct: 322 LTAQITTVIITIVSYFVFSFKPSLDFFLEAPVVLLSIFIYNASRITESSGTTKREKLKII 381

Query: 375 DSPKNKRSK-DTSFIGMAAGANEDAS 399
           +    +RS  D   +     ANED+ 
Sbjct: 382 NGDVWERSNGDGQELEKLTAANEDSE 407

Xenopus laevis (taxid: 8355)

>sp|Q90X48|S35A5_DANRE Probable UDP-sugar transporter protein SLC35A5 OS=Danio rerio GN=slc35a5 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 177/393 (45%), Gaps = 64/393 (16%)

Query: 31  QVSSKTRFLNVALVVGDCILVGLQPILV--FTTKVDGGFKFSPVSVNFLTEAVKVFFAIV 88
           ++ S++    +AL +G  + +G   IL+  F+   +  + + P SVN + EA+K+ F +V
Sbjct: 28  RICSRSSAYTLALGLG-FVTLGTSRILLLKFSGNEENKYDYLPASVNLMAEAIKLVFCLV 86

Query: 89  MLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQ 148
           M +      +V  +   SF  +      SF+      + +  +VPAFLY ++N + F + 
Sbjct: 87  MSV------RVIIREGRSFKDLGCSSGASFL------SYLKWSVPAFLYFLDNLIIFYVI 134

Query: 149 LYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGI-------------S 195
            Y  PA   + SN+ +F  A L ++++KRR S +QW +L +L + I             +
Sbjct: 135 AYLQPAMAVLFSNIVIFTTAFLFRVVLKRRLSWVQWASLIILFLSIVSLTTGNGDQHAMA 194

Query: 196 VNQL-------------------------------RSLPEGTSALGLPVATGAYLYTLIF 224
           V+ L                               R L +      L      Y+  L+ 
Sbjct: 195 VHGLHPAHISTPSNSCLKYTHLHQVHQSHNESYWSRELWDSQLIHKLNSFGLGYVLLLLQ 254

Query: 225 VTVPSLASVFNEYALK--SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS-SFDIL 281
             + +LA+++NE  LK   Q   SI+ QN  LY +G +FN L +++ A ++  +    IL
Sbjct: 255 CFISALANIYNEKILKEGEQLVESIFIQNSKLYLFGLVFNSLTLLLHADYRNLTLHCGIL 314

Query: 282 QGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNF 341
            GH+  ++ L    AA G+  +F  K+ D +    +  + T+     S  LF    +M+F
Sbjct: 315 YGHNVFSVALGFVTAALGLSVAFILKFRDNMFHVLTGQITTVVVTALSFFLFDFQPSMDF 374

Query: 342 ILGISIVFISMHQFFSPLSKVKDEPKNISLESV 374
            +   +V +S+  + S  SK+KD    +  E +
Sbjct: 375 FMQAPVVLLSIFIYHS--SKMKDPEYALQQERL 405

Danio rerio (taxid: 7955)

>sp|A4IHW3|S35A4_XENTR Probable UDP-sugar transporter protein SLC35A4 OS=Xenopus tropicalis GN=slc35a4 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 31/336 (9%)

Query: 26  DRHRHQVSSK--TRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKV 83
           D   H  S K   + L   ++V    + G    L++  KV+G   FS  +V  L E  K 
Sbjct: 9   DGSNHSPSRKRLKQILWGLMLVLSVTIYGSHAPLIYLCKVNGEIPFSSSAVVLLIELSKF 68

Query: 84  FFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYL 143
             ++V  L+Q        K+ +S+   A                   AVPA LY  NN L
Sbjct: 69  VISLVFFLIQDWKSL---KASVSWHLAAPY-----------------AVPAVLYGANNNL 108

Query: 144 KFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLL---IGISVNQLR 200
              +Q + +P++ ++LSNLK+   A+L  + +++R S+ +W ++ LLL   +  S   ++
Sbjct: 109 VVYIQHFMDPSSFQVLSNLKIVSTAVLYSLFLRQRLSVRRWLSVFLLLAAGVFYSYGGIQ 168

Query: 201 SLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAI 260
            L + +S   L V     L  L +  +  L++V+ E  LK+Q    +  QNL+LY +G I
Sbjct: 169 DLEKVSSDTNLYVTLPGLLLMLAYCLISGLSAVYTEMTLKTQ-KIPLNMQNLYLYSFGII 227

Query: 261 FNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTV 320
            N     +TA      + D   G S    ++I + A  G++ S   K ++ I + +  + 
Sbjct: 228 IN-----LTAHLTSSKNSDFFDGFSVWVWVIILSQALNGLIMSLVMKLSNNITRLFIISF 282

Query: 321 ATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 356
           + +  G  S  LF   LT  F L + ++ ++++ ++
Sbjct: 283 SMLANGFLSFILFQLQLTALFFLAVVLIGLAVYMYY 318

Xenopus tropicalis (taxid: 8364)

>sp|Q9R0M8|S35A2_MOUSE UDP-galactose translocator OS=Mus musculus GN=Slc35a2 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 4/235 (1%)

Query: 130 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALAL 189
           LAVP+ +Y + N L+++       AT ++   LK+   AL   +++ R  S +QW +L L
Sbjct: 115 LAVPSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLNRSLSRLQWASLLL 174

Query: 190 LLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPS-LASVFNEYALKSQYDTSIY 248
           L  G+++ Q +    G+    L    GA L  ++   + S  A V+ E  LK     S++
Sbjct: 175 LFTGVAIVQAQQ-AGGSGPRPLDQNPGAGLAAVVASCLSSGFAGVYFEKILKGS-SGSVW 232

Query: 249 HQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKY 308
            +NL L  +G     +G+   A     +S     G++ A   ++ N A  G+L +   KY
Sbjct: 233 LRNLQLGLFGTALGLVGL-WWAEGTAVASQGFFFGYTPAVWGVVLNQAFGGLLVAVVVKY 291

Query: 309 ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVK 363
           AD ILK ++++++ + + +AS  LFG  L   F LG  +V  +++ +  P   VK
Sbjct: 292 ADNILKGFATSLSIVLSTVASIRLFGFHLDPLFALGAGLVIGAVYLYSLPRGAVK 346

Transports nucleotide sugars from the cytosol into Golgi vesicles where glycosyltransferases function.

Mus musculus (taxid: 10090)

>sp|Q93890|SRF3_CAEEL UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS=Caenorhabditis elegans GN=srf-3 PE=1 SV=5

 Score = 80.9 bits (198), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 138/301 (45%), Gaps = 18/301 (5%)

Query: 62  KVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILL 121
           +VD  F  S V+V +LTE +K F  + ++  +   ++              +  +   +L
Sbjct: 67  EVDAMF-VSTVAV-WLTEVIKCFICLFLVAQEETPRRF-------------IHALRTQIL 111

Query: 122 QAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSI 181
           +   + + + +PA +Y + N L ++   + + AT  + S LK+F  A+   II++R  + 
Sbjct: 112 EQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATFMITSQLKIFTAAIFTVIILRRSLNR 171

Query: 182 IQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKS 241
            QW ALA+L +G+S+ QL+      S+   P      +       +   A ++ E  LK 
Sbjct: 172 TQWFALAVLFVGVSLVQLQGTKAKESSGESPFVGFVAVVVA--CCLSGFAGIYFEKILKG 229

Query: 242 QYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGIL 301
               S++ +N+ +  +    +F  I +    K  + + +L G      L +      G+ 
Sbjct: 230 SAPVSLWMRNVQMAVFSIPASFSAIYMQDS-KTVNEYGLLYGFDSIVWLTVLWYGVGGLS 288

Query: 302 SSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSK 361
            +   KYAD I K ++++VA I + + S  LF    +  F+LG S+V  S+  + S  S 
Sbjct: 289 VAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFIPSFTFLLGASLVIFSIFLYSSHQSM 348

Query: 362 V 362
           V
Sbjct: 349 V 349

Acts as a transporter of both UDP-galactose and UDP-N-acetylglucosamine into the Golgi lumen.

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	413
224101251	408	predicted protein [Populus trichocarpa]	0.975	0.987	0.806	0.0
255547474	400	UDP-galactose/UDP-N-acetylglucosamine tr	0.968	1.0	0.813	0.0
224109188	403	predicted protein [Populus trichocarpa]	0.975	1.0	0.799	0.0
359478080	405	PREDICTED: probable UDP-sugar transporte	0.968	0.987	0.810	0.0
356536564	403	PREDICTED: probable UDP-sugar transporte	0.963	0.987	0.796	0.0
363808016	403	uncharacterized protein LOC100815055 [Gl	0.963	0.987	0.791	0.0
357445115	432	UDP-galactose transporter [Medicago trun	0.966	0.923	0.740	1e-180
449446225	402	PREDICTED: CMP-sialic acid transporter 2	0.961	0.987	0.786	1e-179
255577789	898	conserved hypothetical protein [Ricinus	0.934	0.429	0.802	1e-178
297820766	405	UDP-galactose transporter 6 [Arabidopsis	0.961	0.980	0.763	1e-178

>gi|224101251|ref|XP_002312202.1| predicted protein [Populus trichocarpa] gi|222852022|gb|EEE89569.1| predicted protein [Populus trichocarpa]

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/413 (80%), Positives = 364/413 (88%), Gaps = 10/413 (2%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS +       K V+RAYDRHR  VSSKTRFLNV LVVGDCILVGLQPILV+ 
Sbjct: 6   MIECSVCHSKISANNNNSKAVARAYDRHRSDVSSKTRFLNVLLVVGDCILVGLQPILVYM 65

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL 120
           +K DG F+FSP+SVNFLTE  KVFFAI MLL+QAR KKVGEKSLLS ST           
Sbjct: 66  SKQDGKFEFSPISVNFLTETAKVFFAIFMLLIQARQKKVGEKSLLSLST----------F 115

Query: 121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFS 180
           +QAARNNVLLAVPAFLYAI+NYLKFIMQLYFNPATVKML NLKV VIA+LLK+IMKRRFS
Sbjct: 116 VQAARNNVLLAVPAFLYAISNYLKFIMQLYFNPATVKMLGNLKVLVIAVLLKMIMKRRFS 175

Query: 181 IIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 240
           IIQWEALALLLIGISVNQLR+LPEG+SA+GLPVATGAYLYTLIFV+VPS ASV+NEYALK
Sbjct: 176 IIQWEALALLLIGISVNQLRTLPEGSSAMGLPVATGAYLYTLIFVSVPSFASVYNEYALK 235

Query: 241 SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGI 300
           SQ++TSIY QNLFLYGYGAIFNFL I++TA+FKGPSS DIL GHS+ATMLLICNNAAQGI
Sbjct: 236 SQFETSIYLQNLFLYGYGAIFNFLAILVTAIFKGPSSLDILHGHSRATMLLICNNAAQGI 295

Query: 301 LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 360
           LSSFFFKYADTILKKYSSTVATIFTG+ASA LFGH LTMNFILGISIVFISMHQFFSPLS
Sbjct: 296 LSSFFFKYADTILKKYSSTVATIFTGIASAVLFGHALTMNFILGISIVFISMHQFFSPLS 355

Query: 361 KVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI 413
           KVKDEP++ SLE VDS  ++RSKD+SFI M AGAN+DASH   ++EKAPLLPI
Sbjct: 356 KVKDEPRDDSLEMVDSQNSQRSKDSSFINMTAGANDDASHHVGHDEKAPLLPI 408

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547474|ref|XP_002514794.1| UDP-galactose/UDP-N-acetylglucosamine transporter, putative [Ricinus communis] gi|223545845|gb|EEF47348.1| UDP-galactose/UDP-N-acetylglucosamine transporter, putative [Ricinus communis]

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/413 (81%), Positives = 363/413 (87%), Gaps = 13/413 (3%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS +   +   KTVSRAYDRHR  VSSKTR LN+ LVVGDCILVGLQPILV+ 
Sbjct: 1   MIECSVCHSKISPTS---KTVSRAYDRHRSDVSSKTRALNILLVVGDCILVGLQPILVYM 57

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL 120
           +KVDG FKFSP+SVNFLTEA KV FAI+ML +QARHKK G+K  LS ST           
Sbjct: 58  SKVDGQFKFSPISVNFLTEAAKVLFAILMLCIQARHKKTGDKPPLSVST----------F 107

Query: 121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFS 180
           +QAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKV VIA+LLKIIMKRRFS
Sbjct: 108 VQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVLVIAVLLKIIMKRRFS 167

Query: 181 IIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 240
           IIQWEALALLLIGISVNQLRSLP GT+A+GLPVATGAYLYTLIF TVPSLASV+NEYALK
Sbjct: 168 IIQWEALALLLIGISVNQLRSLPGGTTAMGLPVATGAYLYTLIFATVPSLASVYNEYALK 227

Query: 241 SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGI 300
           SQ+DTSIY QNLFLYGYGAIFNFL I++TA+FKGPSS DILQGHSKATMLLICNNAAQGI
Sbjct: 228 SQFDTSIYLQNLFLYGYGAIFNFLAILVTAIFKGPSSLDILQGHSKATMLLICNNAAQGI 287

Query: 301 LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 360
           LSSFFFKYADTILKKYSSTVATIFTG+ASAALFGHTLTMNFILGISIVFISMHQFFSPLS
Sbjct: 288 LSSFFFKYADTILKKYSSTVATIFTGIASAALFGHTLTMNFILGISIVFISMHQFFSPLS 347

Query: 361 KVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI 413
           KVKDEP N  ++ +D   N+RSKD +FI M AGANEDA+H   ++EKAPLLPI
Sbjct: 348 KVKDEPPNGGVQMMDGKNNQRSKDAAFINMTAGANEDANHLVEHDEKAPLLPI 400

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109188|ref|XP_002315116.1| predicted protein [Populus trichocarpa] gi|222864156|gb|EEF01287.1| predicted protein [Populus trichocarpa]

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/413 (79%), Positives = 361/413 (87%), Gaps = 10/413 (2%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECS CHS +       K V+RAYDRHR  VSSK R LN+ LV GDCI VGLQPILV+ 
Sbjct: 1   MIECSECHSKISANNNNSKAVARAYDRHRSDVSSKARVLNLLLVGGDCIFVGLQPILVYI 60

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL 120
           +K +G F +SP+SVNFLTE  KVFFAI MLL+QARHKKVGEKSLLSFST           
Sbjct: 61  SKHNGNFDYSPISVNFLTETAKVFFAIFMLLIQARHKKVGEKSLLSFST----------F 110

Query: 121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFS 180
           +QAARNNVLLAVPAFLYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK+IMKRRFS
Sbjct: 111 VQAARNNVLLAVPAFLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKVIMKRRFS 170

Query: 181 IIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 240
           IIQWEALALLLIGIS+NQL+SLP G++A+GL VATGAYLYTLIFVTVPS ASV+NEYALK
Sbjct: 171 IIQWEALALLLIGISLNQLQSLPAGSTAMGLSVATGAYLYTLIFVTVPSFASVYNEYALK 230

Query: 241 SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGI 300
           SQ++TSIY QNLFLYGYGAIFNFL I++TA+FKGPSS DIL GHSKATMLLICNNAAQGI
Sbjct: 231 SQFETSIYLQNLFLYGYGAIFNFLAILVTALFKGPSSLDILHGHSKATMLLICNNAAQGI 290

Query: 301 LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 360
           LSSFFFKYADTILKKYSSTVATIFTG+ASA LFGHTLTMNFILGISIVFISMHQFFSPLS
Sbjct: 291 LSSFFFKYADTILKKYSSTVATIFTGIASAVLFGHTLTMNFILGISIVFISMHQFFSPLS 350

Query: 361 KVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI 413
           KVKDEP+N SLE+VD   N+RSKD+SFI MAAGAN+DASHR  ++EKAPLLPI
Sbjct: 351 KVKDEPQNGSLETVDGQNNQRSKDSSFINMAAGANDDASHRVEHDEKAPLLPI 403

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478080|ref|XP_003632066.1| PREDICTED: probable UDP-sugar transporter protein SLC35A5-like [Vitis vinifera] gi|297745192|emb|CBI39184.3| unnamed protein product [Vitis vinifera]

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/412 (81%), Positives = 360/412 (87%), Gaps = 12/412 (2%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS   L +   KTVSRAYDRHR ++SSK R LNV LVVGDCILVG QPILVF 
Sbjct: 5   MIECSVCHS--RLVSPSAKTVSRAYDRHRSKISSKHRALNVFLVVGDCILVGFQPILVFM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL 120
           +KVDG F+FSP+SVNFLTE  KV FAIVMLLLQAR +KVGEK LLS ST           
Sbjct: 63  SKVDGKFEFSPISVNFLTEIAKVLFAIVMLLLQARRQKVGEKPLLSVST----------F 112

Query: 121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFS 180
           +QAARNNVLLAVPA LYAINNYLKFIMQLYFNPATVKMLSNLKV VIA+LLK+IM+RRFS
Sbjct: 113 VQAARNNVLLAVPALLYAINNYLKFIMQLYFNPATVKMLSNLKVLVIAVLLKMIMRRRFS 172

Query: 181 IIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 240
            IQWEALALLLIGISVNQ+RSLPEGT+ALGLPVATGAYLYTLIFVTVPSLASV+NEYALK
Sbjct: 173 TIQWEALALLLIGISVNQMRSLPEGTTALGLPVATGAYLYTLIFVTVPSLASVYNEYALK 232

Query: 241 SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGI 300
           SQYDTSIY QNLFLYGYGAIFNFLGIV TA+ KGPSSFDIL GHSKATMLLI NNAAQGI
Sbjct: 233 SQYDTSIYLQNLFLYGYGAIFNFLGIVGTAVVKGPSSFDILHGHSKATMLLIFNNAAQGI 292

Query: 301 LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 360
           LSSFFFKYADTILKKYSSTVATIFTG+ASAA+FGHTLT+NFILGISIVFISMHQFFSPLS
Sbjct: 293 LSSFFFKYADTILKKYSSTVATIFTGIASAAMFGHTLTINFILGISIVFISMHQFFSPLS 352

Query: 361 KVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 412
           KVKDE +N  LE +D   + R KD+SFI MAAGANE+ASHR  ++E+ PLLP
Sbjct: 353 KVKDEEQNGKLEVMDIQGDHRLKDSSFINMAAGANEEASHRVGSDERQPLLP 404

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536564|ref|XP_003536807.1| PREDICTED: probable UDP-sugar transporter protein SLC35A4-like [Glycine max]

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/412 (79%), Positives = 358/412 (86%), Gaps = 14/412 (3%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           ++ECSVCHS  +L +   KT+SRAYDRH+ ++SSK R LNV LVVGDC+LVG QPILV+ 
Sbjct: 5   VMECSVCHS--KLVSPSSKTISRAYDRHKSRISSKQRALNVFLVVGDCVLVGFQPILVYM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL 120
           +KVDG F FSP+SVNFLTE  KVFFAIVMLLLQARH+KVGEK LLS ST           
Sbjct: 63  SKVDGKFNFSPISVNFLTEITKVFFAIVMLLLQARHQKVGEKPLLSIST----------F 112

Query: 121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFS 180
           +QAARNNVLLAVPA LYAINNYLKFIMQLYFNPATVKMLSNLKV VIALLLK+IMKRRFS
Sbjct: 113 MQAARNNVLLAVPALLYAINNYLKFIMQLYFNPATVKMLSNLKVLVIALLLKVIMKRRFS 172

Query: 181 IIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 240
           IIQWEALALLLIGISVNQLRSLPEGT+ALGLPV  GAY YTLIFVTVPSLASV+NEYALK
Sbjct: 173 IIQWEALALLLIGISVNQLRSLPEGTTALGLPVTMGAYAYTLIFVTVPSLASVYNEYALK 232

Query: 241 SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGI 300
           SQYDTSIY QNLFLYGYGAIFNFLGI+ T + KGPSSFDILQGHSKATMLLI NNAAQGI
Sbjct: 233 SQYDTSIYLQNLFLYGYGAIFNFLGILGTVVVKGPSSFDILQGHSKATMLLIANNAAQGI 292

Query: 301 LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 360
           LSSFFFKYADTILKKYSSTVATIFTG+ASA LFGHTLTMNF++GISIVFISMHQFFSPLS
Sbjct: 293 LSSFFFKYADTILKKYSSTVATIFTGIASAVLFGHTLTMNFVIGISIVFISMHQFFSPLS 352

Query: 361 KVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 412
           KVKDE +N  LE  D    +RSK+ SFI MAAGANE+A+HR  ++E+ PLLP
Sbjct: 353 KVKDE-QNGVLELHDVHDKQRSKE-SFINMAAGANEEATHRVGHDERQPLLP 402

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808016|ref|NP_001242719.1| uncharacterized protein LOC100815055 [Glycine max] gi|255636089|gb|ACU18389.1| unknown [Glycine max]

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/412 (79%), Positives = 358/412 (86%), Gaps = 14/412 (3%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           ++ECSVCHS  +L +   KT+SRAYDRH+ ++SSK R LNV LVVGDC+LVG Q ILV+ 
Sbjct: 5   IMECSVCHS--KLVSPSAKTISRAYDRHKSRISSKQRALNVFLVVGDCVLVGFQSILVYM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL 120
           +KVDG F FSP+SVNFLTE  KVFFAIVMLLLQARH+KVGEK LLS ST           
Sbjct: 63  SKVDGKFNFSPISVNFLTEITKVFFAIVMLLLQARHQKVGEKPLLSIST----------F 112

Query: 121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFS 180
           +QAARNNVLLAVPA LYAINNYLKFIMQLYFNPATVKMLSNLKV VIALLLK+IMKRRFS
Sbjct: 113 VQAARNNVLLAVPALLYAINNYLKFIMQLYFNPATVKMLSNLKVLVIALLLKVIMKRRFS 172

Query: 181 IIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 240
           IIQWEALALLLIGISVNQLRSLPEGT+ALGLPV  GAY+YTLIFVTVPSLASV+NEYALK
Sbjct: 173 IIQWEALALLLIGISVNQLRSLPEGTTALGLPVTMGAYIYTLIFVTVPSLASVYNEYALK 232

Query: 241 SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGI 300
           SQYDTSIY QNLFLYGYGAIFNFLGI+ T + KGPSSFDILQGHSKATMLLI NNAAQGI
Sbjct: 233 SQYDTSIYLQNLFLYGYGAIFNFLGILGTVVVKGPSSFDILQGHSKATMLLIANNAAQGI 292

Query: 301 LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 360
           LSSFFFKYADTILKKYSSTVATIFTG+ASA LFGHTLT+NF++GISIVFISMHQFFSPLS
Sbjct: 293 LSSFFFKYADTILKKYSSTVATIFTGIASAVLFGHTLTLNFVIGISIVFISMHQFFSPLS 352

Query: 361 KVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 412
           KVKDE +N  LE  D    +RSK+ SFI MAAGANE+A+HR  ++E+ PLLP
Sbjct: 353 KVKDE-QNGVLELHDVHDKQRSKE-SFINMAAGANEEATHRVGHDERQPLLP 402

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445115|ref|XP_003592835.1| UDP-galactose transporter [Medicago truncatula] gi|355481883|gb|AES63086.1| UDP-galactose transporter [Medicago truncatula]

 Score =  635 bits (1639), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 323/436 (74%), Positives = 362/436 (83%), Gaps = 37/436 (8%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS L +     KTVSRAYDRH+++++SK R LN+ LV GDC+LVG QPILV+ 
Sbjct: 9   MIECSVCHSKL-VSPAATKTVSRAYDRHKNRITSKQRVLNILLVGGDCMLVGFQPILVYM 67

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL 120
           +KVDG F FSP+SVNFLTE  KVFFAIVMLLLQAR++KVG+K LLS ST           
Sbjct: 68  SKVDGKFNFSPISVNFLTEITKVFFAIVMLLLQARNQKVGDKPLLSIST----------F 117

Query: 121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFS 180
           +QAARNNVLLAVPAFLYAINNYLKF+MQLYFNPATVKMLSNLKV VIALLLK++MKRRFS
Sbjct: 118 MQAARNNVLLAVPAFLYAINNYLKFVMQLYFNPATVKMLSNLKVLVIALLLKVVMKRRFS 177

Query: 181 IIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 240
           IIQWEALALLLIGISVNQLRSLPEGT+ALGLPV  GAY+YT IFVTVPS+ASV+NEYALK
Sbjct: 178 IIQWEALALLLIGISVNQLRSLPEGTTALGLPVTMGAYVYTFIFVTVPSMASVYNEYALK 237

Query: 241 SQYDTSI------------------------YHQNLFLYGYGAIFNFLGIVITAMFKGPS 276
           SQYDTSI                        Y QNLFLYGYGA+FNFLGIV+TA+FKGPS
Sbjct: 238 SQYDTSIYLQVKYDTFNCFNIYIIDANSLFFYLQNLFLYGYGAMFNFLGIVVTAIFKGPS 297

Query: 277 SFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHT 336
           SFDIL+GHSKATMLLI NNAAQGILSSFFFKYADTILKKYSSTVATIFTG+ASA LFGH 
Sbjct: 298 SFDILEGHSKATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAVLFGHK 357

Query: 337 LTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANE 396
           LTMNF++GISIVFISMHQFFSPLSKV+DE +N +LE  D  + +RSKD SF+ MAAGANE
Sbjct: 358 LTMNFLIGISIVFISMHQFFSPLSKVRDE-QNGALELHDVQEKQRSKD-SFLNMAAGANE 415

Query: 397 DASHRAVNEEKAPLLP 412
           +ASHR  ++E+ PLLP
Sbjct: 416 EASHRVGHDERQPLLP 431

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446225|ref|XP_004140872.1| PREDICTED: CMP-sialic acid transporter 2-like [Cucumis sativus]

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 324/412 (78%), Positives = 352/412 (85%), Gaps = 15/412 (3%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS L   T  G  +SRAYDRH+ +VSSK R LN  LVVGDCILVGLQPILV+ 
Sbjct: 5   MIECSVCHSKLVSPTTKG--ISRAYDRHKIRVSSKQRALNTLLVVGDCILVGLQPILVYM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL 120
           +KVDG F FSP+SVNFLTE  KV FAIVML+LQARH+KVGEK LLS ST           
Sbjct: 63  SKVDGKFMFSPISVNFLTEIAKVIFAIVMLILQARHQKVGEKPLLSIST----------F 112

Query: 121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFS 180
           +QAARNNVLLAVPAFLYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK+IM+RRFS
Sbjct: 113 MQAARNNVLLAVPAFLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKVIMRRRFS 172

Query: 181 IIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 240
           IIQWEALALLLIGISVNQLRSLPEG   LGL V  GAY+YTLIFVTVPSLASV+NEYALK
Sbjct: 173 IIQWEALALLLIGISVNQLRSLPEGAPNLGLTVTMGAYVYTLIFVTVPSLASVYNEYALK 232

Query: 241 SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGI 300
           SQYDTSIY QNLFLYGYGAIFNF+GI+ T + KGPSSFDILQGHSKATMLLI NNAAQGI
Sbjct: 233 SQYDTSIYLQNLFLYGYGAIFNFMGILGTVIMKGPSSFDILQGHSKATMLLIANNAAQGI 292

Query: 301 LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 360
           LSSFFFKYADTILKKYSSTVATIFTG+ASAALFGHTLTMNF+LGISIVFISMHQFFSPLS
Sbjct: 293 LSSFFFKYADTILKKYSSTVATIFTGIASAALFGHTLTMNFVLGISIVFISMHQFFSPLS 352

Query: 361 KVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 412
           KVKDE   ++ E VD   N+RSK  SFI +AAGAN++ASH   ++E+ PLLP
Sbjct: 353 KVKDEQNGMT-EMVDV-DNQRSKG-SFINIAAGANDEASHLVGSDERKPLLP 401

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577789|ref|XP_002529769.1| conserved hypothetical protein [Ricinus communis] gi|223530767|gb|EEF32635.1| conserved hypothetical protein [Ricinus communis]

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 320/399 (80%), Positives = 349/399 (87%), Gaps = 13/399 (3%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS  +L +   KTVSRAYDRH+ +VSSK R LNV LVVGDCILVGLQPILV+ 
Sbjct: 5   MIECSVCHS--KLVSPSAKTVSRAYDRHKSRVSSKLRALNVFLVVGDCILVGLQPILVYM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL 120
           +KVDG F FSPVSVNFLTEA KV FAIVMLLLQAR +KVGEK LLS ST           
Sbjct: 63  SKVDGKFNFSPVSVNFLTEAAKVLFAIVMLLLQARSQKVGEKPLLSIST----------F 112

Query: 121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFS 180
           +QAARNNVLLAVPAFLYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLKIIM+RRFS
Sbjct: 113 VQAARNNVLLAVPAFLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKIIMRRRFS 172

Query: 181 IIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALK 240
           I+QWEALALLLIGISVNQLRSLPEG +A G+P+AT AY+YTL+FVTVPSLASV+NEYALK
Sbjct: 173 ILQWEALALLLIGISVNQLRSLPEGATATGIPLATIAYVYTLVFVTVPSLASVYNEYALK 232

Query: 241 SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGI 300
           SQY+TSIY QNLFLYGYGAIFNFLGI+ T + KGPSSFDILQGHSKATMLLICNNAAQGI
Sbjct: 233 SQYETSIYLQNLFLYGYGAIFNFLGILATVIVKGPSSFDILQGHSKATMLLICNNAAQGI 292

Query: 301 LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS 360
           LSSFFFKYADTILKKYSSTVATIFTG+ASAALFGHTLTMNF+LGISIVFISMHQFFS LS
Sbjct: 293 LSSFFFKYADTILKKYSSTVATIFTGIASAALFGHTLTMNFLLGISIVFISMHQFFSSLS 352

Query: 361 KVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDAS 399
           K KDE +N ++E +D   + RSKD SFI MAAGANE+ +
Sbjct: 353 KAKDEQQNGTVELMDVQDDHRSKD-SFINMAAGANEEQT 390

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820766|ref|XP_002878266.1| UDP-galactose transporter 6 [Arabidopsis lyrata subsp. lyrata] gi|297324104|gb|EFH54525.1| UDP-galactose transporter 6 [Arabidopsis lyrata subsp. lyrata]

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 314/411 (76%), Positives = 356/411 (86%), Gaps = 14/411 (3%)

Query: 3   ECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTK 62
           ECSVCHS  +L + G KT+SRAYD H+ +VSSK R LNV LVVGDC+LVGLQP+LV+ +K
Sbjct: 7   ECSVCHS--KLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLVYMSK 64

Query: 63  VDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQ 122
           VDG F FSP+SVNFLTE  KV FAIVMLL+QARH+KVGEK LLS ST           +Q
Sbjct: 65  VDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVST----------FVQ 114

Query: 123 AARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSII 182
           AARNNVLLAVPA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK++MKRRFSII
Sbjct: 115 AARNNVLLAVPALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSII 174

Query: 183 QWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQ 242
           QWEALALLLIGISVNQLRSLPEG +A+G+P+ATGAY+ T+IFVTVPS+ASVFNEYALKSQ
Sbjct: 175 QWEALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKSQ 234

Query: 243 YDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILS 302
           YDTSIY QNLFLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQGILS
Sbjct: 235 YDTSIYLQNLFLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILS 294

Query: 303 SFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV 362
           SFFFKYADTILKKYSSTVATIFTG+ASAALFGH +TMNF+LGISIVFISMHQFFSPL+KV
Sbjct: 295 SFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQFFSPLAKV 354

Query: 363 KDE-PKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 412
           +DE  +N +LE V++    R+ D SFI MAAGANE+ASHR  ++++ PLLP
Sbjct: 355 RDEQQQNGNLELVNAKDTHRAND-SFINMAAGANEEASHRGESDDRTPLLP 404

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	413
TAIR|locus:2081292	405	UTR6 "UDP-galactose transporte	0.961	0.980	0.754	1.1e-156
TAIR|locus:2040976	406	AT2G43240 [Arabidopsis thalian	0.966	0.982	0.748	4.4e-155
TAIR|locus:2152955	340	AT5G41760 [Arabidopsis thalian	0.723	0.879	0.308	1.7e-36
TAIR|locus:504955503	352	AT4G35335 [Arabidopsis thalian	0.525	0.616	0.342	5e-28
UNIPROTKB|F1NDA7	299	SLC35A4 "Uncharacterized prote	0.530	0.732	0.306	4.6e-25
ZFIN|ZDB-GENE-061103-595	314	slc35a4 "solute carrier family	0.605	0.796	0.271	4.3e-23
UNIPROTKB|F1NTH1	432	SLC35A5 "Uncharacterized prote	0.365	0.349	0.282	1.1e-20
UNIPROTKB|G5EFD3	328	srf-3 "Protein SRF-3, isoform	0.685	0.862	0.259	1.5e-20
UNIPROTKB|Q8MIA3	324	SLC35A4 "Probable UDP-sugar tr	0.532	0.679	0.319	3.3e-20
ZFIN|ZDB-GENE-070424-281	395	si:dkey-83k24.4 "si:dkey-83k24	0.854	0.893	0.242	3e-19

TAIR|locus:2081292 UTR6 "UDP-galactose transporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
 Identities = 310/411 (75%), Positives = 353/411 (85%)

Query:     3 ECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTK 62
             EC  CHS  +L + G KT+SRAYD H+ +VSSK R LNV LVVGDC+LVGLQP+LV+ +K
Sbjct:     7 ECPACHS--KLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLVYMSK 64

Query:    63 VDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQ 122
             VDG F FSP+SVNFLTE  KV FAIVMLL+QARH+KVGEK LLS ST        F+  Q
Sbjct:    65 VDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVST--------FV--Q 114

Query:   123 AARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSII 182
             AARNNVLLAVPA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK++MKRRFSII
Sbjct:   115 AARNNVLLAVPALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSII 174

Query:   183 QWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQ 242
             QWEALALLLIGISVNQLRSLPEG +A+G+P+ATGAY+ T+IFVTVPS+ASVFNEYALKSQ
Sbjct:   175 QWEALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKSQ 234

Query:   243 YDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILS 302
             YDTSIY QNLFLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQGILS
Sbjct:   235 YDTSIYLQNLFLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILS 294

Query:   303 SFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV 362
             SFFFKYADTILKKYSSTVATIFTG+ASAALFGH +TMNF+LGISIVFISMHQFFSPL+K 
Sbjct:   295 SFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQFFSPLAKA 354

Query:   363 KDEPK-NISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 412
             +DE + N +LE + + K+    + SFI MAAGANE+ASHR  ++++ PLLP
Sbjct:   355 RDEQQQNGNLE-LGNTKDTHRANESFINMAAGANEEASHRGESDDRTPLLP 404

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2040976 AT2G43240 [Arabidopsis thaliana (taxid:3702)]

 Score = 1512 (537.3 bits), Expect = 4.4e-155, P = 4.4e-155
 Identities = 310/414 (74%), Positives = 349/414 (84%)

Query:     1 MIECSVCHSTLELETVGGKTVSRAYDRHRHQ--VSSKTRFLNVALVVGDCILVGLQPILV 58
             M ECSVC S   L +   K +SRAYD + ++  VSSK R LNV LVVGDC+LVGLQP+LV
Sbjct:     5 MAECSVCRS--RLVSPSSKAISRAYDNYNYKIRVSSKQRALNVFLVVGDCMLVGLQPVLV 62

Query:    59 FTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISF 118
             + +KVDG F FSP+SVNFLTE  KV FA+VMLL QARH+KVGEK LLS ST        F
Sbjct:    63 YMSKVDGKFNFSPISVNFLTEIAKVIFAMVMLLFQARHQKVGEKPLLSLST--------F 114

Query:   119 ILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRR 178
             +  QAARNN+LLAVPA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK+IMKRR
Sbjct:   115 V--QAARNNMLLAVPAGLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMIMKRR 172

Query:   179 FSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 238
             FSIIQWEALALLLIGIS+NQLRSLPEG + + +P+ATGAY+ T IFVTVPSLASV+NEYA
Sbjct:   173 FSIIQWEALALLLIGISINQLRSLPEGATTVAVPIATGAYICTFIFVTVPSLASVYNEYA 232

Query:   239 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQ 298
             LKSQYDTSIY QNLFLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQ
Sbjct:   233 LKSQYDTSIYLQNLFLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQ 292

Query:   299 GILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP 358
             GILSSFFFKYADTILKKYSSTVATIFTG+ASAALFGH LTMNF+LGISIVFISMHQFFSP
Sbjct:   293 GILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHILTMNFLLGISIVFISMHQFFSP 352

Query:   359 LSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 412
             LSK KDE +N ++E VD+    R+KD SFI MAAGA E+ASHR  ++++ PLLP
Sbjct:   353 LSKAKDEQQNGNIELVDAKDGHRAKD-SFINMAAGATEEASHRIESDDRVPLLP 405

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

TAIR|locus:2152955 AT5G41760 [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 100/324 (30%), Positives = 172/324 (53%)

Query:    49 ILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFS 108
             IL   Q IL   ++ DGG+K+   +V FL E  K+  + + L  + R          S S
Sbjct:    15 ILTSSQGILTTLSQSDGGYKYDYATVPFLAEVFKLIISGLFLWREMR---------TSSS 65

Query:   109 TIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIA 168
             T +++        ++ R   L  +P+ +Y I+N ++F    Y + +T +++ NLK+    
Sbjct:    66 TTSRITTD----WKSVR---LFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTG 118

Query:   169 LLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGT--SALGLPVATGAYLYTLIFVT 226
             +L ++ +KR+ S +QW A+ LL +G + +Q++   E +  S    P+    YL  ++   
Sbjct:   119 ILFRLFLKRKLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQ--GYLLGILSAG 176

Query:   227 VPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAM---F-KGPSSFDILQ 282
             + +LA ++ E+ +K   DT +Y QNL LY +G++FN   ++       F KGP    I  
Sbjct:   177 LSALAGIYTEFLMKRNNDT-LYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFD 235

Query:   283 GHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFI 342
             G+S  T L++ N  + G+L S+  KYAD I+K YS+++A + T +AS  LF    T+   
Sbjct:   236 GYSITTWLVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLF 295

Query:   343 LGISIVFISMHQFFSPLSKVKDEP 366
             LGI I  +S+H +F+P   + D P
Sbjct:   296 LGIVICIMSLHMYFAPPHTLVDLP 319

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005456 "CMP-N-acetylneuraminate transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS;IDA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IDA

GO:0015739 "sialic acid transport" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

TAIR|locus:504955503 AT4G35335 [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 76/222 (34%), Positives = 117/222 (52%)

Query:   132 VPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLL 191
             +PA LY   N L++ +  Y +    ++L NL +    +L +II+KR+ S IQW    LL 
Sbjct:   128 IPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKRKLSEIQWAGFILLC 187

Query:   192 IGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQN 251
              G +  QL S  +      LP  T A +  L+       A V+ E  +K +   +I  QN
Sbjct:   188 CGCTTAQLNSNSDRVLQTSLPGWTMAIVMALL----SGFAGVYTEAIIKKRPSRNINVQN 243

Query:   252 LFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADT 311
              +LY +G  FN + IVI   F   ++     G+S  T+L+I N+A  GI  S   KYAD 
Sbjct:   244 FWLYVFGMAFNAVAIVIQD-FDAVANKGFFHGYSFITLLMILNHALSGIAVSMVMKYADN 302

Query:   312 ILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMH 353
             I+K YS++VA + T + S  LF   L++ F LG ++V +S++
Sbjct:   303 IVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVY 344

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|F1NDA7 SLC35A4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 71/232 (30%), Positives = 128/232 (55%)

Query:   131 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 190
             A+ A LYA NN L   MQL+ +P+T ++LSNLK+   ALL  + +++R  + QW AL LL
Sbjct:    72 ALSALLYAANNNLVVHMQLFMDPSTYQILSNLKIVSTALLYSLFLRQRLRVRQWLALCLL 131

Query:   191 LI-GISVN--QLRSLPEGT---SALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYD 244
             +  G+S +   LR  P G+   SA+ L +     L   ++  +  L++V+ E  LK+Q  
Sbjct:   132 MAAGVSYSCGGLRD-PRGSGSPSAMQLHITLVGLLLISVYCLISGLSAVYTEAILKTQA- 189

Query:   245 TSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSF 304
               +  QN+FLY +G + N +G   ++  +G      L+G S   ++++ + A  G++ S 
Sbjct:   190 LPLNLQNIFLYFFGVLVNLVGHFWSSTERG-----FLEGFSFWVLVIVVSQALNGLIMSV 244

Query:   305 FFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 356
               K++  I + +  + + +   L S ALF   LT+ F + +S + +++H ++
Sbjct:   245 VMKHSSNITRLFVISCSILVNALLSVALFNLQLTLLFFIAVSCIGLAVHLYY 296

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-061103-595 slc35a4 "solute carrier family 35, member A4" [Danio rerio (taxid:7955)]

 Score = 268 (99.4 bits), Expect = 4.3e-23, P = 4.3e-23
 Identities = 70/258 (27%), Positives = 126/258 (48%)

Query:   102 KSLLSFSTIAQMPVISFILLQAARNNVL-LAVPAFLYAINNYLKFIMQLYFNPATVKMLS 160
             K  +SF+++     +S + +  +       AVPA LYA NN+L   MQ Y +P++ ++LS
Sbjct:    63 KLFISFASLLASGSVSTLRISISMTTASPYAVPAVLYAFNNHLVVFMQAYMDPSSFQVLS 122

Query:   161 NLKVFVIALLLKIIMKRRFSIIQWEALALLL-IGISVNQLRSLPEGTSALGLPVATGAYL 219
             NLK+   ALL    + +R    QW A+ LL+  G+S +      EG     + + +   L
Sbjct:   123 NLKIASTALLYTSCLGKRLHRRQWFAMGLLVSAGVSHSCFSYDLEGKQETAVYITSWGLL 182

Query:   220 YTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFD 279
               L++  V  LA+V+ E  LKSQ    +  QNLFLY +G + N     + +   G     
Sbjct:   183 LVLVYCFVSGLAAVYTERVLKSQR-LPLSMQNLFLYAFGVVVN-----LASHLSGGEQKG 236

Query:   280 ILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTM 339
               +G+S    +++    A G+L S   K+   I + +  + A +   + S  + G  LT 
Sbjct:   237 FFEGYSAVVWVIVAGQVANGLLMSVVMKHGTGITRLFVISSAMLVNAVLSWGILGVQLTG 296

Query:   340 NFILGISIVFISMHQFFS 357
              F+  + ++  +++ +++
Sbjct:   297 YFLFPVVLIGWAVYLYYT 314

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|F1NTH1 SLC35A5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 173 (66.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 48/170 (28%), Positives = 83/170 (48%)

Query:    29 RHQVSSKTRFLNVALVVGDCILVGLQPILV--FTTKVDGGFKFSPVSVNFLTEAVKVFFA 86
             R  V SKT      L+ G  I +G   IL+  ++   D  + + P +VN  +E VK+F  
Sbjct:     9 RSAVCSKTTIYTF-LLGGVFITLGSSRILLMKYSANEDNKYDYLPTTVNICSEVVKLFLC 67

Query:    87 IVMLLLQARHKKVGEK--SLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLK 144
             +V+ L   + +   ++    LS+                  N++  ++PAFLY ++N + 
Sbjct:    68 VVLALWVKKKEGCLDRPSGCLSWKNFC--------------NSMKWSIPAFLYFLDNLIV 113

Query:   145 FIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGI 194
             F +  Y  PA   + SN  +   ALL +I++KR+ S +QW +L +L + I
Sbjct:   114 FYVLSYLQPAMAVLFSNFVIITTALLFRIVLKRKLSWVQWASLVILFLSI 163

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G5EFD3 srf-3 "Protein SRF-3, isoform b" [Caenorhabditis elegans (taxid:6239)]

 Score = 246 (91.7 bits), Expect = 1.5e-20, P = 1.5e-20
 Identities = 78/301 (25%), Positives = 144/301 (47%)

Query:    62 KVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILL 121
             +VD  F  S V+V +LTE +K F   + L L A+     E++   F     +  +   +L
Sbjct:    27 EVDAMF-VSTVAV-WLTEVIKCF---ICLFLVAQ-----EETPRRF-----IHALRTQIL 71

Query:   122 QAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSI 181
             +   + + + +PA +Y + N L ++   + + AT  + S LK+F  A+   II++R  + 
Sbjct:    72 EQPYDTLKVCIPAMIYIVQNNLFYVAASHLDAATFMITSQLKIFTAAIFTVIILRRSLNR 131

Query:   182 IQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKS 241
              QW ALA+L +G+S+ QL+      S+   P     ++  ++   +   A ++ E  LK 
Sbjct:   132 TQWFALAVLFVGVSLVQLQGTKAKESSGESPFV--GFVAVVVACCLSGFAGIYFEKILKG 189

Query:   242 QYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGIL 301
                 S++ +N+ +  +    +F  I +    K  + + +L G      L +      G+ 
Sbjct:   190 SAPVSLWMRNVQMAVFSIPASFSAIYMQDS-KTVNEYGLLYGFDSIVWLTVLWYGVGGLS 248

Query:   302 SSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSK 361
              +   KYAD I K ++++VA I + + S  LF    +  F+LG S+V  S+  + S  S 
Sbjct:   249 VAVCIKYADNIAKNFATSVAIILSTIGSIFLFDFIPSFTFLLGASLVIFSIFLYSSHQSM 308

Query:   362 V 362
             V
Sbjct:   309 V 309

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

UNIPROTKB|Q8MIA3 SLC35A4 "Probable UDP-sugar transporter protein SLC35A4" [Sus scrofa (taxid:9823)]

 Score = 243 (90.6 bits), Expect = 3.3e-20, P = 3.3e-20
 Identities = 76/238 (31%), Positives = 119/238 (50%)

Query:   131 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 190
             A+ A LY  NN L   +Q Y +P+T ++LSNLK+   AL   + ++RR S  Q  AL LL
Sbjct:    90 ALSALLYGANNNLVIHLQHYMDPSTYQVLSNLKIGSTALFYCLCLRRRLSARQGLALLLL 149

Query:   191 LIG---ISVNQLRS----LPEG--TSALG---LPVATGAYLYTLIFVTVPSLASVFNEYA 238
             +      +   LR     LPE   T+A G   L V     L  L++  +  L+SV+ E  
Sbjct:   150 MAAGACYAAGGLRDPGSPLPESPSTAASGPVPLHVTAPGLLLLLLYCLISGLSSVYTELL 209

Query:   239 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQ 298
             LK Q    +  QNLFLY +G + N LG+       GP    +L+G S    L++ + A  
Sbjct:   210 LKRQR-LPLALQNLFLYTFGVLLN-LGLHAGG---GPGP-GLLEGFSGWAALVVLSQALN 263

Query:   299 GILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF 356
             G+L S   K+  +I + +  + + +   + SAAL    LT  F L   ++ +++H ++
Sbjct:   264 GLLMSAVMKHGSSITRLFVVSCSLVVNAVLSAALLRLQLTAAFFLAALLIGLAVHLYY 321

GO:0016021 "integral to membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

ZFIN|ZDB-GENE-070424-281 si:dkey-83k24.4 "si:dkey-83k24.4" [Danio rerio (taxid:7955)]

 Score = 250 (93.1 bits), Expect = 3.0e-19, P = 3.0e-19
 Identities = 92/380 (24%), Positives = 175/380 (46%)

Query:    14 ETVGGKTVSRAYDRHRHQVSSKTRFLNVA-LVVGDCILVGLQPILVFTTKVDGGFKFSPV 72
             E+    +  +   R +++V+ K ++ ++A LV+ +  L+    + +   +   G  F   
Sbjct:    10 ESPNRNSEDKTSSRRQNEVNKKLKYTSLAILVIQNASLI----LSIRYVRTLPGDHFYTT 65

Query:    73 SVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAV 132
             S   + E +KV   + ++L+Q R       SLL + +I    VI +       + + LAV
Sbjct:    66 SAVVMAEVLKVITCLFIILIQKRGNVKSFVSLL-YDSI----VIQYW------DTLKLAV 114

Query:   133 PAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLI 192
             P+ +Y + N L+++       AT ++   LK+   AL   +++++  S IQW +L LL  
Sbjct:   115 PSLIYTLQNNLQYVAISNLPAATFQVTYQLKILTTALFSVLMLRKSLSRIQWISLVLLFA 174

Query:   193 GISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLAS----VFNEYALKSQYDTSIY 248
             G+++ Q+     G     +  A   Y   L+ V +  L+S    V+ E  LK     S++
Sbjct:   175 GVAIVQVEQ-ESGKQKEAVTAANQNYFKGLLSVIISCLSSGFAGVYFEKILKGS-SASVW 232

Query:   249 HQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKY 308
              +N+ L  +G +   LG+         +    L G++     +I N A  G+L +   KY
Sbjct:   233 MRNIQLGIFGTVLGLLGMWWNDG-AAIAEKGFLFGYTPMVWGVIFNQAFGGLLVAVVVKY 291

Query:   309 ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKN 368
             AD ILK ++++ + I + + S  LFG  + + F LG  +V  +++ +  P    K     
Sbjct:   292 ADNILKGFATSFSIIVSTITSVYLFGFHVDLVFTLGAGLVIGAVYMYSLP----KANTST 347

Query:   369 ISLESVDSPKNKRSKDTSFI 388
              S  +  S K   S+  +F+
Sbjct:   348 SSTSTASSSKAGESELDAFL 367

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8GY97	CSTR2_ARATH	No assigned EC number	0.7463	0.9661	0.9827	no	no
Q9C5H6	CSTR3_ARATH	No assigned EC number	0.7463	0.9636	0.9827	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VIII000669 hypothetical protein (408 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	413
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	5e-31
TIGR00803	222	TIGR00803, nst, UDP-galactose transporter	1e-13

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score =  118 bits (297), Expect = 5e-31
 Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 12/225 (5%)

Query: 130 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALAL 189
           +AVPAF+Y + N L ++     + AT ++   LK+   AL   +++ R+ S  QW +L L
Sbjct: 20  VAVPAFIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVLMLGRKLSWYQWASLLL 79

Query: 190 LLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTV----PSLASVFNEYALKSQYDT 245
           L +G+++ QL      T++     A       L  V         A V+ E  LK   +T
Sbjct: 80  LFLGVAIVQLDQKSSETNSKR--GAEQNPGLGLSAVLAACFTSGFAGVYFEKILKGS-NT 136

Query: 246 SIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFD--ILQGHSKATMLLICNNAAQGILSS 303
           SI+ +N+ LY +G  F  L   +     G +  +     G++     ++   A  G++ +
Sbjct: 137 SIWIRNIQLYFFGIFFALLTCWLY---DGSAISEKGFFFGYTAFVWAVVLLQAVGGLVVA 193

Query: 304 FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIV 348
              KYAD ILK +++++A I + +AS  LF    T+ F+LG  +V
Sbjct: 194 VVVKYADNILKGFATSLAIILSTVASVLLFDFRPTLTFLLGAILV 238

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

>gnl|CDD|129885 TIGR00803, nst, UDP-galactose transporter

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 5/222 (2%)

Query: 130 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALAL 189
           L+VP  +    N L  I  L    A  K ++ LK+   AL+    +       QW +L L
Sbjct: 2   LSVPIHIIFKQNNLVLIA-LGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKL 60

Query: 190 LLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYH 249
           L +G+++ Q+      T   G PV   + + + +  +    A V+ E  LK   DT  + 
Sbjct: 61  LKLGVAIVQMVQSSAKTLMFGNPVVGLSAVLSALLSSG--FAGVYFEKILKD-GDTMFWS 117

Query: 250 QNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYA 309
           +NL L  +G    F  ++ +      S+F    G+  A  ++   N   G+      +YA
Sbjct: 118 RNLQLPLFGLFSTFSVLLWSDGTL-ISNFGFFIGYPTAVWIVGLLNVGGGLCIGGVVRYA 176

Query: 310 DTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFIS 351
           D   K + + ++ I + LAS  LF   ++  F LG  +VF++
Sbjct: 177 DNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLA 218

The 10-12 TMS Nucleotide Sugar Transporters (TC 2.A.7.10)Nucleotide-sugar transporters (NSTs) are found in the Golgi apparatus and the endoplasmic reticulum of eukaryotic cells. Members of the family have been sequenced from yeast, protozoans and animals. Animals such as C. elegans possess many of these transporters. Humans have at least two closely related isoforms of the UDP-galactose:UMP exchange transporter.NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	413
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	100.0
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	100.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.94
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.93
KOG1581	327	consensus UDP-galactose transporter related protei	99.91
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.91
PLN00411	358	nodulin MtN21 family protein; Provisional	99.89
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.84
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.83
PRK15430	296	putative chloramphenical resistance permease RarD;	99.83
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.82
PRK11272	292	putative DMT superfamily transporter inner membran	99.81
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.81
KOG1580	337	consensus UDP-galactose transporter related protei	99.8
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.78
PRK11689	295	aromatic amino acid exporter; Provisional	99.74
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.74
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.72
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.65
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.59
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.51
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.41
KOG1582	367	consensus UDP-galactose transporter related protei	99.41
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.32
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.27
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.27
COG2962	293	RarD Predicted permeases [General function predict	99.24
KOG2765	416	consensus Predicted membrane protein [Function unk	99.22
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.15
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.12
KOG2766	336	consensus Predicted membrane protein [Function unk	98.89
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.86
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.59
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.55
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.51
COG2510	140	Predicted membrane protein [Function unknown]	98.48
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.44
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.37
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.35
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.28
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.28
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.18
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.1
COG2510	140	Predicted membrane protein [Function unknown]	98.04
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.93
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.92
PLN00411	358	nodulin MtN21 family protein; Provisional	97.73
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.71
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.65
PRK11689	295	aromatic amino acid exporter; Provisional	97.59
COG2076	106	EmrE Membrane transporters of cations and cationic	97.57
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.56
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.54
PRK11431	105	multidrug efflux system protein; Provisional	97.52
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.48
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.44
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.44
PRK11272	292	putative DMT superfamily transporter inner membran	97.41
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.4
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.38
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.38
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.24
PRK15430	296	putative chloramphenical resistance permease RarD;	97.19
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.07
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.06
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.0
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.91
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.77
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.75
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.63
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.47
PRK13499	345	rhamnose-proton symporter; Provisional	96.47
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.41
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.29
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.25
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.15
COG2076	106	EmrE Membrane transporters of cations and cationic	96.07
PRK11431	105	multidrug efflux system protein; Provisional	96.0
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.83
COG0697	292	RhaT Permeases of the drug/metabolite transporter	95.74
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.47
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.3
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	94.96
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.81
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	94.54
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.5
PRK13499	345	rhamnose-proton symporter; Provisional	94.05
KOG1580	337	consensus UDP-galactose transporter related protei	93.88
KOG1581	327	consensus UDP-galactose transporter related protei	93.64
COG2962	293	RarD Predicted permeases [General function predict	92.75
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	91.47
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	90.62
KOG4510	346	consensus Permease of the drug/metabolite transpor	89.84
KOG2922	335	consensus Uncharacterized conserved protein [Funct	88.18
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	81.11
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	80.97

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.9e-59  Score=451.74  Aligned_cols=318  Identities=31%  Similarity=0.467  Sum_probs=261.8

Q ss_pred             ccccCCcccc---hhhHHHHHHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhc-Ccc
Q 015117           24 AYDRHRHQVS---SKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARH-KKV   99 (413)
Q Consensus        24 ~~~~~~~~~~---~k~~~l~vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~-~~~   99 (413)
                      ++|++.....   .|+..+.++-++..     .++.++++++.+.+++|.|+++||++|++|+++|..+++++.+. ..+
T Consensus         2 ~~~~~~~~~~~~~~k~~~l~~~t~~~~-----~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~   76 (345)
T KOG2234|consen    2 AVKSMPIISSLSQMKYLSLIVLTAQNT-----ALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKK   76 (345)
T ss_pred             CcccccccccHHHHHHHHHHHHHHHHh-----hHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhh
Confidence            4454433333   44444444433333     35566788876657889999999999999999999999988644 111


Q ss_pred             ccccccccchhcccchHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCC
Q 015117          100 GEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRF  179 (413)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kl  179 (413)
                      ..+.+. + .+          ...+|++++.++||++|++|||++|++++|+|++|||+++|+|+++||+|++++|+||+
T Consensus        77 ~~~~l~-~-~i----------~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkL  144 (345)
T KOG2234|consen   77 SLKSLS-K-EI----------LAAPRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKL  144 (345)
T ss_pred             hhhhcC-H-HH----------HhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhh
Confidence            112211 1 11          45677999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHhhcCCCCCCCCC--CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHH
Q 015117          180 SIIQWEALALLLIGISVNQLRSLPEGTSA--LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGY  257 (413)
Q Consensus       180 s~~qw~al~Ll~~GV~lv~~~~~~~~~~~--~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~  257 (413)
                      +++||.|++++++|++++|.+..++.+..  ........|..+++.+|++||+||||+||++|+. +.+.|+||+|||++
T Consensus       145 s~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s-~~s~wi~NiqL~~~  223 (345)
T KOG2234|consen  145 SRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS-NVSLWIRNIQLYFF  223 (345)
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHH
Confidence            99999999999999999995432211111  1111245699999999999999999999999987 78999999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCC--ccccccCChhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCC
Q 015117          258 GAIFNFLGIVITAMFKGPS--SFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGH  335 (413)
Q Consensus       258 g~l~~l~~ll~~~~~~~~~--~~~~~~g~~~~~~~~il~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~  335 (413)
                      |+++++..++..   +++.  ..|+|+||++.+|++++++|+||+++++++||+|||+|+|++++++++++++|+++||+
T Consensus       224 g~~f~~l~~~~~---d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~  300 (345)
T KOG2234|consen  224 GILFNLLTILLQ---DGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDF  300 (345)
T ss_pred             HHHHHHHHHhhc---cccccccCCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            999999887653   3332  46899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHHHHHHHhcccCCcC
Q 015117          336 TLTMNFILGISIVFISMHQFFSPLSKV  362 (413)
Q Consensus       336 ~lt~~~~lG~~LVi~gv~ly~~~~~~~  362 (413)
                      +||..+++|+.+|+.++++|+.++.+.
T Consensus       301 ~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  301 QLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             CchHHHHHHHHHHHHHHHHhhcCCccc
Confidence            999999999999999999999655554

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=100.00  E-value=2.4e-44  Score=343.79  Aligned_cols=226  Identities=33%  Similarity=0.536  Sum_probs=199.8

Q ss_pred             HHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       121 ~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      .+.+|+.+++++||++|++||++.|++++++||++||+++|+|+++||++++++||||++++||+|++++++|+++++.+
T Consensus        11 ~~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~   90 (244)
T PF04142_consen   11 WKSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS   90 (244)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence            46788899999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCC--CCCC------CCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015117          201 SLPEGT--SALG------LPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMF  272 (413)
Q Consensus       201 ~~~~~~--~~~~------~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~  272 (413)
                      +....+  +..+      ......|++++++++++||+++||+||++|++ +.|+|.||+|+|++|++++++...... .
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~-~~s~~~~N~qL~~~gi~~~~~~~~~~~-~  168 (244)
T PF04142_consen   91 SSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS-NVSLWIQNMQLYLFGILFNLLALLLSD-G  168 (244)
T ss_pred             CccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHhccc-c
Confidence            643211  1111      11235699999999999999999999999997 689999999999999999987754311 1


Q ss_pred             cCCCccccccCChhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Q 015117          273 KGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIV  348 (413)
Q Consensus       273 ~~~~~~~~~~g~~~~~~~~il~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LV  348 (413)
                      +.....|+|+||++++|.+++.+|+||+++++++||+|||+|+|++++++++++++|+++||.++|..+++|..+|
T Consensus       169 ~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  169 SAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            1112458999999999999999999999999999999999999999999999999999999999999999998875

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=99.94  E-value=2.2e-26  Score=216.93  Aligned_cols=219  Identities=25%  Similarity=0.335  Sum_probs=189.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 015117          130 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSAL  209 (413)
Q Consensus       130 ~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~~  209 (413)
                      +++|+..|+.+|++.++++.+.++..++.. |.|++.++++....++++++..||.++.++..|+..++.++..+..  .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~--~   78 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKT--L   78 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccc--c
Confidence            578999999999999999999999999999 9999999999999999999999999999999999988765422111  1


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CccccccCChhH
Q 015117          210 GLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGP--SSFDILQGHSKA  287 (413)
Q Consensus       210 ~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~--~~~~~~~g~~~~  287 (413)
                      .......|..+.+.++++++++++|+|+.+|++ +..+|.+|+++++++.+.+.......   .++  ...+++++++..
T Consensus        79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~-~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  154 (222)
T TIGR00803        79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDG-DTMFWSRNLQLPLFGLFSTFSVLLWS---DGTLISNFGFFIGYPTA  154 (222)
T ss_pred             ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCC-CCchHHHHHHHHHHHHHHHHHHHhhc---ccchhhccCcccCCchH
Confidence            111234577788889999999999999998876 67899999999999988665443321   111  134678899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          288 TMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       288 ~~~~il~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                      +|..+++++++|+++++++||+|+++|+++++++++++.++|+++|||+++..+++|+.+|+.|+++|
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999887

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.93  E-value=2.1e-23  Score=205.68  Aligned_cols=291  Identities=20%  Similarity=0.279  Sum_probs=215.1

Q ss_pred             HHHHHHHHHHHhh-hhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHH
Q 015117           41 VALVVGDCILVGL-QPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFI  119 (413)
Q Consensus        41 vl~v~~~~~~~~~-~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (413)
                      +.++...++.|+. |..+++.  ..+.  -.+..+.+++.+.-.+++.......+.++     +..              
T Consensus         5 ~~~i~~~~~~~g~~qE~i~~~--~~~~--~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-----~~~--------------   61 (303)
T PF08449_consen    5 VAGIFGGCCSYGILQEKIMTT--PYGS--PFPLFLTFVQFAFNALFSFILLSLFKFPK-----SRK--------------   61 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHcC--CCCC--cccHHHHHHHHHHHHHHHHHHHHhccccC-----CCc--------------
Confidence            4444555555544 3333331  1111  13578888888888888877665444111     000              


Q ss_pred             HHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Q 015117          120 LLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL  199 (413)
Q Consensus       120 ~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~  199 (413)
                           +....++++++++.+.+.+.+.+++|+|.+++++++++|++++++++++++|||++++||+++++.++|++++..
T Consensus        62 -----~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~  136 (303)
T PF08449_consen   62 -----IPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTL  136 (303)
T ss_pred             -----ChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeee
Confidence                 012378999999999999999999999999999999999999999999999999999999999999999999877


Q ss_pred             CCCCCCCCCCCC-CcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCC--C
Q 015117          200 RSLPEGTSALGL-PVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGP--S  276 (413)
Q Consensus       200 ~~~~~~~~~~~~-~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~--~  276 (413)
                      .+..+.+..... .....|+.+++++.+++|+.++|+||+++++ +.+.+....+.++++.++.++..+.-.  .++  +
T Consensus       137 ~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~-~~~~~~~mfy~n~~~~~~~~~~~~~l~--~~~~~~  213 (303)
T PF08449_consen  137 SDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKY-GKSPWELMFYTNLFSLPFLLILLFLLP--TGEFRS  213 (303)
T ss_pred             cccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHHH--hhHhhH
Confidence            654322111111 1112389999999999999999999999987 567787788888888877766544300  111  1


Q ss_pred             ccccccCChhHHH---HHHHHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Q 015117          277 SFDILQGHSKATM---LLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMH  353 (413)
Q Consensus       277 ~~~~~~g~~~~~~---~~il~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~  353 (413)
                      ...+...++...+   ...+.++++...+...+|..++...+..++++.+++.++|+++||+++++.+++|+++|+.|+.
T Consensus       214 ~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~  293 (303)
T PF08449_consen  214 AIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIF  293 (303)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHH
Confidence            1122333332222   2234567777888888999999999999999999999999999999999999999999999999


Q ss_pred             HhcccCCcC
Q 015117          354 QFFSPLSKV  362 (413)
Q Consensus       354 ly~~~~~~~  362 (413)
                      +|+.++.|+
T Consensus       294 ~~~~~~~k~  302 (303)
T PF08449_consen  294 LYSYAKKKK  302 (303)
T ss_pred             HHHHhhccC
Confidence            998866654

; GO: 0055085 transmembrane transport

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.91  E-value=2.3e-22  Score=191.83  Aligned_cols=297  Identities=15%  Similarity=0.179  Sum_probs=235.5

Q ss_pred             ccchhhHHHHHHHHHHHHHHHhhhhhhh----eecc-cCC-cccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 015117           31 QVSSKTRFLNVALVVGDCILVGLQPILV----FTTK-VDG-GFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSL  104 (413)
Q Consensus        31 ~~~~k~~~l~vl~v~~~~~~~~~~~il~----~~s~-~~g-~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~  104 (413)
                      +...+.....++++.+....|..++++.    +..+ +|+ +|. ++...+|++.+..++++..++..++...       
T Consensus         6 ~~~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~-~~~fL~~~q~l~~~~~s~~~l~~~k~~~-------   77 (327)
T KOG1581|consen    6 GGMANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFE-HSLFLVFCQRLVALLVSYAMLKWWKKEL-------   77 (327)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCccccccc-ccHHHHHHHHHHHHHHHHHHHhcccccC-------
Confidence            3344555666777777777777776665    2222 233 443 4578899999999999988776544321       


Q ss_pred             cccchhcccchHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHH
Q 015117          105 LSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQW  184 (413)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw  184 (413)
                       ++.+                ..++|...++.+.+...++|.||+|++.+|+.+.+++|++.++++..++.|+|++.+++
T Consensus        78 -~~~a----------------pl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eY  140 (327)
T KOG1581|consen   78 -SGVA----------------PLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEY  140 (327)
T ss_pred             -CCCC----------------chhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHH
Confidence             1111                14588999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHH
Q 015117          185 EALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFL  264 (413)
Q Consensus       185 ~al~Ll~~GV~lv~~~~~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~  264 (413)
                      +..++...||.++.+.+..++....+.+..++|+.++...-+++|+.+..+++++|++ +.+.|.++..+.+|+++.+..
T Consensus       141 l~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-k~s~~~mM~~vNLf~~i~~~~  219 (327)
T KOG1581|consen  141 LVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY-KVSSLHMMFGVNLFSAILNGT  219 (327)
T ss_pred             HHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC-CccHhHHHHHHHHHHHHHHHH
Confidence            9999999999998876544333344545667899999999999999999999999976 789999999999999999987


Q ss_pred             HHHHHHhhcCCC--ccccccCChhHHHHHH---HHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcH
Q 015117          265 GIVITAMFKGPS--SFDILQGHSKATMLLI---CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTM  339 (413)
Q Consensus       265 ~ll~~~~~~~~~--~~~~~~g~~~~~~~~i---l~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~  339 (413)
                      .++.    +|..  ...|...++...|-+.   ...++|+.++.+.++..++++-...+..+-++++++|+++|||++++
T Consensus       220 ~li~----qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~  295 (327)
T KOG1581|consen  220 YLIL----QGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSS  295 (327)
T ss_pred             hhhc----CCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccch
Confidence            7442    3321  2244455554444333   46788999999999999999988888889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcc
Q 015117          340 NFILGISIVFISMHQFFS  357 (413)
Q Consensus       340 ~~~lG~~LVi~gv~ly~~  357 (413)
                      .+++|..+|+.|+++=..
T Consensus       296 ~q~~g~~iVFg~i~l~~~  313 (327)
T KOG1581|consen  296 EQWLGVLIVFGGIFLEIL  313 (327)
T ss_pred             hhccCeeeehHHHHHHHH
Confidence            999999999999876444

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.91  E-value=1.5e-21  Score=193.73  Aligned_cols=233  Identities=15%  Similarity=0.179  Sum_probs=182.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Q 015117          125 RNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPE  204 (413)
Q Consensus       125 r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~  204 (413)
                      ++.|+|.+.|++++..|++...|++|++.+.+|++.++.+++++++++++||+|+++.||+|+++.++|+.++...+...
T Consensus        77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~  156 (334)
T PF06027_consen   77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLS  156 (334)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccc
Confidence            45679999999999999999999999999999999999999999999999999999999999999999999887665432


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCC
Q 015117          205 GTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGH  284 (413)
Q Consensus       205 ~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~  284 (413)
                      +++..+.+....|++++++++++.|++.|+.|+..|+.   +......++.++|.+++.+.+.+   .+..+... + .|
T Consensus       157 ~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~---~~~~~lg~~Glfg~ii~~iq~~i---le~~~i~~-~-~w  228 (334)
T PF06027_consen  157 GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA---PRVEFLGMLGLFGFIISGIQLAI---LERSGIES-I-HW  228 (334)
T ss_pred             cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC---CHHHHHHHHHHHHHHHHHHHHHh---eehhhhhc-c-CC
Confidence            22222233446799999999999999999999999964   45555677788888887765432   23221111 1 23


Q ss_pred             hhHHHHHHHH----HHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcccCC
Q 015117          285 SKATMLLICN----NAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS  360 (413)
Q Consensus       285 ~~~~~~~il~----~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~~~  360 (413)
                      ++..+...+.    ..+.-.++..++++.++..-+....++.+++.++++++||+++++..++|.++|++|..+|+..+.
T Consensus       229 ~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  229 TSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            4433332221    122234667888999988888888888999999999999999999999999999999999987655


Q ss_pred             cCCCC
Q 015117          361 KVKDE  365 (413)
Q Consensus       361 ~~~~~  365 (413)
                      +.+++
T Consensus       309 ~~~~~  313 (334)
T PF06027_consen  309 PEEEA  313 (334)
T ss_pred             ccccc
Confidence            55443

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.89  E-value=5.3e-20  Score=185.32  Aligned_cols=285  Identities=12%  Similarity=0.102  Sum_probs=183.8

Q ss_pred             HhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHHHhhhhhhHH
Q 015117           51 VGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLL  130 (413)
Q Consensus        51 ~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  130 (413)
                      |+.+-++.|.+-++|   .++...++.+-.+-.++.+.+....+++..   .+.                 ..+|+...+
T Consensus        25 ~~~~~~~~k~a~~~G---~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~---~~~-----------------~~~~~~~~l   81 (358)
T PLN00411         25 VVGISTLFKVATSKG---LNIYPFLGYSYLLASLLLLPSLFFTNRSRS---LPP-----------------LSVSILSKI   81 (358)
T ss_pred             HHHHHHHHHHHHHCC---CCccHHHHHHHHHHHHHHHHHHHHHHHhcc---cCc-----------------chHHHHHHH
Confidence            444445566665554   445556666665554444433333222110   010                 012334466


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Q 015117          131 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKII------MKRRFSIIQWEALALLLIGISVNQLRSLPE  204 (413)
Q Consensus       131 ~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~ll------L~~kls~~qw~al~Ll~~GV~lv~~~~~~~  204 (413)
                      ++.+++.++++.+.|.+++|++++...++.++.|++|+++++++      +|||++++||+++++.++|++++...+.+.
T Consensus        82 ~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~  161 (358)
T PLN00411         82 GLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPR  161 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcc
Confidence            66777666777899999999999999999999999999999999      699999999999999999998876432210


Q ss_pred             C--------------C--CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHH-HHHHHHHHHH
Q 015117          205 G--------------T--SALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGY-GAIFNFLGIV  267 (413)
Q Consensus       205 ~--------------~--~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~-g~l~~l~~ll  267 (413)
                      .              .  ...+......|.+++++++++++++.+..++..++++  +....+.+...+ +..+..+.+ 
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~--~~~~~t~~~~~~~~~~~~~~~l-  238 (358)
T PLN00411        162 VFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP--AAFTVSFLYTVCVSIVTSMIGL-  238 (358)
T ss_pred             cccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--cHhHHHHHHHHHHHHHHHHHHH-
Confidence            0              0  0001111234888999999999999999999988762  222223332222 222222222 


Q ss_pred             HHHhhcCCCccccccCChhHHHHHHHHHHHHH----HHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHH
Q 015117          268 ITAMFKGPSSFDILQGHSKATMLLICNNAAQG----ILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFIL  343 (413)
Q Consensus       268 ~~~~~~~~~~~~~~~g~~~~~~~~il~~aigg----l~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~l  343 (413)
                         ..++.........++...+. +++.++..    .+-.+.+|+.++...+....+.|+++++++++++||++++.+++
T Consensus       239 ---~~~~~~~~~~~~~~~~~~~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~i  314 (358)
T PLN00411        239 ---VVEKNNPSVWIIHFDITLIT-IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLI  314 (358)
T ss_pred             ---HHccCCcccceeccchHHHH-HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHH
Confidence               22221111112233333332 44444432    22334667888888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCcCCCCCC
Q 015117          344 GISIVFISMHQFFSPLSKVKDEPK  367 (413)
Q Consensus       344 G~~LVi~gv~ly~~~~~~~~~~~~  367 (413)
                      |.++|+.|+++...  .+.||.+|
T Consensus       315 G~~LIl~Gv~l~~~--~~~~~~~~  336 (358)
T PLN00411        315 GGILITLGFYAVMW--GKANEEKD  336 (358)
T ss_pred             HHHHHHHHHHHHHh--hhhhhhhh
Confidence            99999999999876  33444433

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.84  E-value=3.9e-19  Score=167.70  Aligned_cols=288  Identities=17%  Similarity=0.164  Sum_probs=198.4

Q ss_pred             hhheecc---cCCc----ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHHHh--hhh
Q 015117           56 ILVFTTK---VDGG----FKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQA--ARN  126 (413)
Q Consensus        56 il~~~s~---~~g~----~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~  126 (413)
                      ++.||+.   .+|.    .++-.+...|+.|+..+.+-..+-.+..+   .+...-++  ++.         -|.  +-+
T Consensus        20 l~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~---~g~~s~~~--~il---------sq~~~pf~   85 (372)
T KOG3912|consen   20 LVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNG---QGVSSDLD--SIL---------SQDSSPFN   85 (372)
T ss_pred             HHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CCcccccc--ccc---------ccccCCCC
Confidence            3567765   2322    24555788899999887654444332222   22222110  000         011  122


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCC-C
Q 015117          127 NVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPE-G  205 (413)
Q Consensus       127 ~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~-~  205 (413)
                      ...+.-||++......+.|+++.+.+++.||+++..-++||++|+..+|||+++.+||+++....+|++++...+... .
T Consensus        86 p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~  165 (372)
T KOG3912|consen   86 PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT  165 (372)
T ss_pred             cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence            345666999999999999999999999999999999999999999999999999999999999999999987553211 1


Q ss_pred             CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHH-HHHHHHHHHHHHhhcCCC----cccc
Q 015117          206 TSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYG-AIFNFLGIVITAMFKGPS----SFDI  280 (413)
Q Consensus       206 ~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g-~l~~l~~ll~~~~~~~~~----~~~~  280 (413)
                      ++-........|.++++.+.++-|+..|+.||.+|++ +.++..-.-+-..|| .++++.++....+..+..    +.|.
T Consensus       166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~-nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~  244 (372)
T KOG3912|consen  166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS-NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGV  244 (372)
T ss_pred             CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc-cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcc
Confidence            1111111234589999999999999999999999987 555554445557777 444444444433333311    1232


Q ss_pred             ccCChhHHHH-----HHHHHHHHHHHHH---------HHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Q 015117          281 LQGHSKATML-----LICNNAAQGILSS---------FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGIS  346 (413)
Q Consensus       281 ~~g~~~~~~~-----~il~~aiggl~vs---------~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~  346 (413)
                      ++.|.. +|.     ..+..+.+|..++         .+.|+.++.++....++++.+.++++..++.|.+...+++|.+
T Consensus       245 ~eD~~~-~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFl  323 (372)
T KOG3912|consen  245 LEDWGD-AFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFL  323 (372)
T ss_pred             hhhHHH-HHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHH
Confidence            333321 111     1122333343333         6679999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccC
Q 015117          347 IVFISMHQFFSPL  359 (413)
Q Consensus       347 LVi~gv~ly~~~~  359 (413)
                      +.+.|+++|+...
T Consensus       324 iLi~Gi~lY~~il  336 (372)
T KOG3912|consen  324 ILIMGIILYNQIL  336 (372)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998643

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.83  E-value=1.2e-17  Score=168.01  Aligned_cols=298  Identities=11%  Similarity=0.125  Sum_probs=196.2

Q ss_pred             ccccccCCcccchhhHHHHHHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 015117           22 SRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGE  101 (413)
Q Consensus        22 ~~~~~~~~~~~~~k~~~l~vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~  101 (413)
                      .+.+++.-..+..|-..++..+...+....    +..|+.-++  ++| |.++..++-++..+++..+.. .+.+    .
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~wy~~s~~~~----~~nK~vl~~--~~~-P~~l~~~~~~~~~l~~~~~~~-~~~~----~  103 (350)
T PTZ00343         36 YHSLFESFPNFKWKLALLFLTWYALNVLYV----VDNKLALNM--LPL-PWTISSLQLFVGWLFALLYWA-TGFR----K  103 (350)
T ss_pred             ccchhhccCcccHHHHHHHHHHHHHHHHHH----HHHHHHHHh--CCh-hHHHHHHHHHHHHHHHHHHHH-hCCC----C
Confidence            333344334455666666666655554331    222322222  223 788888887777665544321 1111    0


Q ss_pred             ccccccchhcccchHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCH
Q 015117          102 KSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSI  181 (413)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~  181 (413)
                      ++...  ..             .++.......++++...+...+.++++.+++.+++++.+.|++|++++++++|||+++
T Consensus       104 ~~~~~--~~-------------~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~  168 (350)
T PTZ00343        104 IPRIK--SL-------------KLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNL  168 (350)
T ss_pred             CCCCC--CH-------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccH
Confidence            11110  00             0122356667777777777788999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCC--CchHHHHHHH--HHH
Q 015117          182 IQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYD--TSIYHQNLFL--YGY  257 (413)
Q Consensus       182 ~qw~al~Ll~~GV~lv~~~~~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~--~s~~~~n~~l--~~~  257 (413)
                      ++|+++++.++|+++....+         ...+..|+++++++++++++.+++.||.+++.+.  .+....+.+.  ..+
T Consensus       169 ~~~l~l~l~v~Gv~l~~~~~---------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~  239 (350)
T PTZ00343        169 YAYLSLIPIVGGVALASVKE---------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLI  239 (350)
T ss_pred             HHHHHHHHHHHHHHheeccc---------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHH
Confidence            99999999999999975321         1234569999999999999999999999876421  1222233443  456


Q ss_pred             HHHHHHHHHHHHHhhcCCCccc-------cccCChh-HHHHHHHHHHHHHHHHH----HHHHhhhhhHHHHHhHHHHHHH
Q 015117          258 GAIFNFLGIVITAMFKGPSSFD-------ILQGHSK-ATMLLICNNAAQGILSS----FFFKYADTILKKYSSTVATIFT  325 (413)
Q Consensus       258 g~l~~l~~ll~~~~~~~~~~~~-------~~~g~~~-~~~~~il~~aiggl~vs----~v~Ky~~~i~k~~a~s~~iv~t  325 (413)
                      |.++.+|..+.   .++.....       .+..+.+ ..+..++..++...+..    +.+++.++...+.+..+.++++
T Consensus       240 ~~l~~lp~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~  316 (350)
T PTZ00343        240 ASLISLPLVLF---FEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVI  316 (350)
T ss_pred             HHHHHHHHHHH---HhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence            66666665432   12211000       1112211 11222333333333333    4778899999999999999999


Q ss_pred             HHHHHHHhCCCCcHHHHHHHHHHHHHHHHhccc
Q 015117          326 GLASAALFGHTLTMNFILGISIVFISMHQFFSP  358 (413)
Q Consensus       326 ~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~  358 (413)
                      +++|+++|||++|..+++|.++++.|+++|+..
T Consensus       317 iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        317 IVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             hhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.83  E-value=1.4e-17  Score=163.71  Aligned_cols=272  Identities=14%  Similarity=0.161  Sum_probs=183.6

Q ss_pred             HHHHHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHH
Q 015117           38 FLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVIS  117 (413)
Q Consensus        38 ~l~vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (413)
                      ....+++...++.++..++..|.. .    +++|..+++.+-++..++-+.++..+++..     . ..+ .        
T Consensus         7 ~~g~~~~l~a~~~wg~~~~~~k~~-~----~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~-----~-~~~-~--------   66 (296)
T PRK15430          7 RQGVLLALAAYFIWGIAPAYFKLI-Y----YVPADEILTHRVIWSFFFMVVLMSICRQWS-----Y-LKT-L--------   66 (296)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHh-c----CCCHHHHHHHHHHHHHHHHHHHHHHHccHH-----H-HHH-H--------
Confidence            345667777888899988888753 2    277888999998887654444333222110     0 000 0        


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015117          118 FILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  197 (413)
Q Consensus       118 ~~~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv  197 (413)
                         .+.+++.......++.+++++.+.|++++++|+++..++.++.|+++++++++++|||++++||.++++.++|+.++
T Consensus        67 ---~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li  143 (296)
T PRK15430         67 ---IQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQ  143 (296)
T ss_pred             ---HcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence               01122222344566778899999999999999999999999999999999999999999999999999999999987


Q ss_pred             hcCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 015117          198 QLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS  277 (413)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~  277 (413)
                      ..+.   ++    .      .+++++++++++++.++.||..++. .......+.++..++.+.    .+.  ...... 
T Consensus       144 ~~~~---~~----~------~~~~l~aa~~~a~~~i~~r~~~~~~-~~~~~~~~~~~~~~~~~~----~~~--~~~~~~-  202 (296)
T PRK15430        144 LWTF---GS----L------PIIALGLAFSFAFYGLVRKKIAVEA-QTGMLIETMWLLPVAAIY----LFA--IADSST-  202 (296)
T ss_pred             HHHc---CC----c------cHHHHHHHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHHHH----HHH--HccCCc-
Confidence            5321   11    0      1356778899999999988864321 112223333332222221    110  011110 


Q ss_pred             cccccCChhHHHHHH----HHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Q 015117          278 FDILQGHSKATMLLI----CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMH  353 (413)
Q Consensus       278 ~~~~~g~~~~~~~~i----l~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~  353 (413)
                       ......++..|..+    +..+++..+....+|+.++...+...++.++++.+++++++||+++..+++|+++|+.++-
T Consensus       203 -~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~  281 (296)
T PRK15430        203 -SHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALA  281 (296)
T ss_pred             -ccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence             00111111112222    2344556677788899999999999999999999999999999999999999999977654


Q ss_pred             H
Q 015117          354 Q  354 (413)
Q Consensus       354 l  354 (413)
                      +
T Consensus       282 v  282 (296)
T PRK15430        282 I  282 (296)
T ss_pred             H
Confidence            3

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.82  E-value=6.8e-18  Score=166.09  Aligned_cols=216  Identities=12%  Similarity=0.151  Sum_probs=159.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSA  208 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~  208 (413)
                      .....++++++++.+.+.+++|++++.++++.++.|+++++++++++|||+++++|+++++.++|+++....+   .   
T Consensus        67 ~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~---~---  140 (302)
T TIGR00817        67 LLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE---L---  140 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc---c---
Confidence            5666677788889999999999999999999999999999999999999999999999999999998753211   1   


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--cccccc---C
Q 015117          209 LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS--SFDILQ---G  283 (413)
Q Consensus       209 ~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~--~~~~~~---g  283 (413)
                         +.+..|++++++++++++++.++.||..+++ +.+.+..+.+....+.++.+|....   .++..  ..+...   .
T Consensus       141 ---~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~~~l~p~~~~---~~~~~~~~~~~~~~~~~  213 (302)
T TIGR00817       141 ---SFNWAGFLSAMISNITFVSRNIFSKKAMTIK-SLDKTNLYAYISIMSLFLLSPPAFI---TEGPPFLPHGFMQAISG  213 (302)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCcccHHHHHHHHHHHHHHHHHHH---HcchHHHHHHHHHhhcc
Confidence               1234599999999999999999999988732 2234444455555666555554332   22211  000000   0


Q ss_pred             Chh-HHHHHHHHHHHHH-----HHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          284 HSK-ATMLLICNNAAQG-----ILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       284 ~~~-~~~~~il~~aigg-----l~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      .+. ..|..++..+++.     ......+|+.++.+.+....+.+++++++|++++||++|..+++|+++++.|+++|+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       214 VNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            111 1222222222211     1222468889999999999999999999999999999999999999999999999986

specificities overlap.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.81  E-value=6.6e-17  Score=158.59  Aligned_cols=276  Identities=12%  Similarity=0.117  Sum_probs=191.3

Q ss_pred             hhhHHHHHHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhccc
Q 015117           34 SKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQM  113 (413)
Q Consensus        34 ~k~~~l~vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~  113 (413)
                      .++..-.++.++...+.+|+..+.+|...++    .+|...++++-++-.++-+.+...++++     .+  +       
T Consensus         3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~----~~p~~~~~~R~~~a~l~ll~~~~~~~~~-----~~--~-------   64 (292)
T PRK11272          3 FRQLLPLFGALFALYIIWGSTYLVIRIGVES----WPPLMMAGVRFLIAGILLLAFLLLRGHP-----LP--T-------   64 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHHHHHHhCCC-----CC--c-------
Confidence            4566667777888888999988888865443    6788888888777765544444332211     00  0       


Q ss_pred             chHHHHHHHhhhhhhHHHHHHHH-HHHHHHHHHHHH-hhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 015117          114 PVISFILLQAARNNVLLAVPAFL-YAINNYLKFIMQ-LYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLL  191 (413)
Q Consensus       114 ~~~~~~~~~~~r~~~~~~vpAll-y~~~n~L~f~al-~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~  191 (413)
                             .   ++.....+.+.+ ...++.+.|.+. ++++++...++..+.|+++++++.+ +|||++++||.++++.+
T Consensus        65 -------~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~  133 (292)
T PRK11272         65 -------L---RQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGL  133 (292)
T ss_pred             -------H---HHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHH
Confidence                   0   111123444444 456788889998 9999999999999999999999985 79999999999999999


Q ss_pred             HHHHHhhcCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHh
Q 015117          192 IGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAM  271 (413)
Q Consensus       192 ~GV~lv~~~~~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~  271 (413)
                      +|+.++..++.  .      +....|.++.+++++++++++++.+|..+.   .+......++. .+.+...+...    
T Consensus       134 ~Gv~ll~~~~~--~------~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~----  197 (292)
T PRK11272        134 AGIVLLNSGGN--L------SGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEML-AAGVVLLIASL----  197 (292)
T ss_pred             HhHHHHhcCcc--c------ccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHH-HHHHHHHHHHH----
Confidence            99988753321  1      112358899999999999999999997543   23333333333 33332222211    


Q ss_pred             hcCCCccccccCChhHHHHHHHHHHHHHH-----HHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHH
Q 015117          272 FKGPSSFDILQGHSKATMLLICNNAAQGI-----LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGIS  346 (413)
Q Consensus       272 ~~~~~~~~~~~g~~~~~~~~il~~aiggl-----~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~  346 (413)
                      ..+..   .....+...|..+++.++.+.     +....+|+.+....+...++.++++++++++++||++|..+++|.+
T Consensus       198 ~~~~~---~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~  274 (292)
T PRK11272        198 LSGER---LTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALG  274 (292)
T ss_pred             HcCCc---ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence            12211   111123344555555555444     4445567888888888888999999999999999999999999999


Q ss_pred             HHHHHHHHhcc
Q 015117          347 IVFISMHQFFS  357 (413)
Q Consensus       347 LVi~gv~ly~~  357 (413)
                      +++.|+++.+.
T Consensus       275 lIi~gv~~~~~  285 (292)
T PRK11272        275 VIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHH
Confidence            99999987755

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.81  E-value=8.5e-17  Score=158.32  Aligned_cols=274  Identities=16%  Similarity=0.123  Sum_probs=180.0

Q ss_pred             HHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHHH
Q 015117           43 LVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQ  122 (413)
Q Consensus        43 ~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (413)
                      +....++.+|+..+.+|..-+    ..+|...++++-.+-.++.+.+.  .+++     ++                   
T Consensus         8 ~~l~~~~~Wg~~~~~~k~~~~----~~~p~~~~~~R~~~a~~~l~~~~--~~~~-----~~-------------------   57 (299)
T PRK11453          8 LALLVVVVWGLNFVVIKVGLH----NMPPLMLAGLRFMLVAFPAIFFV--ARPK-----VP-------------------   57 (299)
T ss_pred             HHHHHHHHHhhhHHHHHHHHh----cCCHHHHHHHHHHHHHHHHHHHh--cCCC-----Cc-------------------
Confidence            345567788888888775443    26788888888665432222111  1110     00                   


Q ss_pred             hhhhhhHHHHHHH-HHHHHHHHHHHHHhh-cChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          123 AARNNVLLAVPAF-LYAINNYLKFIMQLY-FNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       123 ~~r~~~~~~vpAl-ly~~~n~L~f~al~~-l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                       ++   ....-++ .+..+..+.|.++++ ++++...++.++.|+++++++++++|||++++||+++++.++|+.++..+
T Consensus        58 -~~---~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~  133 (299)
T PRK11453         58 -LN---LLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED  133 (299)
T ss_pred             -hH---HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence             01   1111122 234555677889887 78899999999999999999999999999999999999999999887643


Q ss_pred             CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc-c
Q 015117          201 SLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSF-D  279 (413)
Q Consensus       201 ~~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~-~  279 (413)
                      +. ++     .+.+..|+++.++++++++++.++.+|..++.++......+.+....+.   .+........+++... .
T Consensus       134 ~~-~~-----~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  204 (299)
T PRK11453        134 SL-NG-----QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPI---IPFFVASLILDGSATMIH  204 (299)
T ss_pred             cC-CC-----cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHH---HHHHHHHHHhcCchhhhh
Confidence            21 11     1122358999999999999999999998665311111111122222211   1211111122322110 1


Q ss_pred             cccCChhHHHHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Q 015117          280 ILQGHSKATMLLICNNAAQGILSSFFF-----KYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ  354 (413)
Q Consensus       280 ~~~g~~~~~~~~il~~aiggl~vs~v~-----Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~l  354 (413)
                      .+..+++..|..+++.++.+..+++..     |+.++...+...++.|+++.+++++++||+++..+++|+++|+.|+++
T Consensus       205 ~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l  284 (299)
T PRK11453        205 SLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYI  284 (299)
T ss_pred             hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH
Confidence            123445566777777666666555444     566777777888899999999999999999999999999999999987


Q ss_pred             hcccC
Q 015117          355 FFSPL  359 (413)
Q Consensus       355 y~~~~  359 (413)
                      -..+.
T Consensus       285 ~~~~~  289 (299)
T PRK11453        285 NVFGL  289 (299)
T ss_pred             Hhcch
Confidence            65543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.80  E-value=9.3e-19  Score=161.57  Aligned_cols=257  Identities=15%  Similarity=0.173  Sum_probs=195.5

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Q 015117           67 FKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFLYAINNYLKFI  146 (413)
Q Consensus        67 ~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~vpAlly~~~n~L~f~  146 (413)
                      +.|. -+.||+.....-+++-+++..+.+.+            +++.            ..+.|+-.++.|.+...-...
T Consensus        50 FTfa-laLVf~qC~~N~vfAkvl~~ir~~~~------------~D~t------------~~~~YaAcs~sYLlAMVssN~  104 (337)
T KOG1580|consen   50 FTFA-LALVFFQCTANTVFAKVLFLIRKKTE------------IDNT------------PTKMYAACSASYLLAMVSSNQ  104 (337)
T ss_pred             ehHH-HHHHHHHHHHHHHHHHhheeeccccc------------ccCC------------cchHHHHHHHHHHHHHHhccc
Confidence            4443 57888888888887766554332211            1111            145788899999999999999


Q ss_pred             HHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcchhHHHHHHHHHH
Q 015117          147 MQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVT  226 (413)
Q Consensus       147 al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~~~~~~~~~G~ll~L~a~~  226 (413)
                      |++++|.+|..+-+++||+.++|+.+++.+|+++++++.++++..+||+++.+.+...+...  ......|-++.+++-.
T Consensus       105 Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e--~~t~g~GElLL~lSL~  182 (337)
T KOG1580|consen  105 ALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAE--DKTFGFGELLLILSLA  182 (337)
T ss_pred             hhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCc--ccccchHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999987743222110  0112347788889989


Q ss_pred             HHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--cccccCChhHHHH---HHHHHHHHHHH
Q 015117          227 VPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS--FDILQGHSKATML---LICNNAAQGIL  301 (413)
Q Consensus       227 ~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~--~~~~~g~~~~~~~---~il~~aiggl~  301 (413)
                      ..|+.++.+|++.+.+ .++-..++..+++|+.+....+++    +.|+..  .-|.+.++...|-   +-+...+|+.+
T Consensus       183 mDGlTg~~Qdrira~y-q~~g~~MM~~~NlwStL~Lg~g~l----fTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~f  257 (337)
T KOG1580|consen  183 MDGLTGSIQDRIRASY-QRTGTSMMFYTNLWSTLYLGAGLL----FTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWF  257 (337)
T ss_pred             hcccchhHHHHHHHhh-ccCchhhHHHHHHHHHHHhhhhhe----ehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHH
Confidence            9999999999998876 333334456677888877666654    344321  1123444443332   23466789999


Q ss_pred             HHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          302 SSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       302 vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                      +...+.+.+..+.+..++.+-.||++.|+++|+++++..+|+|..+|+.+...=
T Consensus       258 IF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  258 IFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            999999999999999999999999999999999999999999999999997643

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.78  E-value=2.7e-16  Score=150.61  Aligned_cols=205  Identities=15%  Similarity=0.119  Sum_probs=152.5

Q ss_pred             HHHHH-HHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 015117          130 LAVPA-FLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSA  208 (413)
Q Consensus       130 ~~vpA-lly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~  208 (413)
                      +.+.+ +...+++.+.|.|++|+++++..++.++.|+++++++.+++|||++++||.++++.++|+.++..++.  .   
T Consensus        49 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~--~---  123 (260)
T TIGR00950        49 LLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN--L---  123 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--c---
Confidence            44444 45678999999999999999999999999999999999999999999999999999999998754321  1   


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHH
Q 015117          209 LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKAT  288 (413)
Q Consensus       209 ~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~  288 (413)
                         .....|+++.++++++++..+++.+|..++. +.+....+.+....+.++..+...    ..++..     ..+...
T Consensus       124 ---~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~-----~~~~~~  190 (260)
T TIGR00950       124 ---SINPAGLLLGLGSGISFALGTVLYKRLVKKE-GPELLQFTGWVLLLGALLLLPFAW----FLGPNP-----QALSLQ  190 (260)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHHhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHH----hcCCCC-----CcchHH
Confidence               1224588999999999999999999988754 222222222333444444333322    122211     112233


Q ss_pred             HHHHH-----HHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Q 015117          289 MLLIC-----NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISM  352 (413)
Q Consensus       289 ~~~il-----~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv  352 (413)
                      |..++     ...++..+....+|+.+....+...++.++++.+++++++||+++...++|..+++.|+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       191 WGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            33232     33344455666788899889899999999999999999999999999999999999885

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.74  E-value=2.7e-15  Score=147.39  Aligned_cols=271  Identities=13%  Similarity=0.072  Sum_probs=173.7

Q ss_pred             HHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHH
Q 015117           42 ALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILL  121 (413)
Q Consensus        42 l~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (413)
                      ++....++.+++.-+..|..-++    ++|....+++-.+-.++-+.+  . ..++       .+.              
T Consensus         7 l~~l~a~~~Wg~~~~~~k~~~~~----~~P~~~~~~R~~~a~l~l~~~--~-~~~~-------~~~--------------   58 (295)
T PRK11689          7 LIGLIAILLWSTMVGLIRGVSES----LGPVGGAAMIYSVSGLLLLLT--V-GFPR-------LRQ--------------   58 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcc----CChHHHHHHHHHHHHHHHHHH--c-cccc-------ccc--------------
Confidence            34555666777776666654332    678777777744443332221  1 1110       000              


Q ss_pred             HhhhhhhHHHHHHHHHHHHHHHHHHHHhh----cChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015117          122 QAARNNVLLAVPAFLYAINNYLKFIMQLY----FNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  197 (413)
Q Consensus       122 ~~~r~~~~~~vpAlly~~~n~L~f~al~~----l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv  197 (413)
                      +.++   ....-++.++.++.+.|.++++    +++.+..++..+.|+++++++++++|||++++||.++++.++|+.++
T Consensus        59 ~~~~---~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li  135 (295)
T PRK11689         59 FPKR---YLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWV  135 (295)
T ss_pred             ccHH---HHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhe
Confidence            0011   1122334466777778877754    68888899999999999999999999999999999999999999887


Q ss_pred             hcCCCCCC-CCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 015117          198 QLRSLPEG-TSA-LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGP  275 (413)
Q Consensus       198 ~~~~~~~~-~~~-~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~  275 (413)
                      ..++.+.+ .+. .+......|+++++++++++++++++.||..++. + +. .  ......+..+ .+...    .++.
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~-~~-~--~~~~~~~~~l-~~~~~----~~~~  205 (295)
T PRK11689        136 LGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-N-GI-T--LFFILTALAL-WIKYF----LSPQ  205 (295)
T ss_pred             ecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-C-ch-h--HHHHHHHHHH-HHHHH----HhcC
Confidence            64432100 000 0111123488999999999999999999986553 2 22 1  1111222221 11111    2221


Q ss_pred             CccccccCChhHHHHHHHHHHH----HHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Q 015117          276 SSFDILQGHSKATMLLICNNAA----QGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFIS  351 (413)
Q Consensus       276 ~~~~~~~g~~~~~~~~il~~ai----ggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~g  351 (413)
                      .    ....++..|..+++.++    +-.+-.+.+|+.++...+...++.|+++.+++++++||+++..+++|+++|+.|
T Consensus       206 ~----~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~g  281 (295)
T PRK11689        206 P----AMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAG  281 (295)
T ss_pred             c----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHh
Confidence            1    12234444444444332    223444677888999999999999999999999999999999999999999999


Q ss_pred             HHHhcc
Q 015117          352 MHQFFS  357 (413)
Q Consensus       352 v~ly~~  357 (413)
                      +++...
T Consensus       282 v~~~~~  287 (295)
T PRK11689        282 SLLCWL  287 (295)
T ss_pred             HHHHhh
Confidence            876543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.74  E-value=5.8e-15  Score=144.93  Aligned_cols=264  Identities=12%  Similarity=-0.005  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHH
Q 015117           41 VALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFIL  120 (413)
Q Consensus        41 vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (413)
                      +.++...++.++....+.|+.-+    +++|...++.+-++-.++-+.+..+ .+..       .+              
T Consensus        14 ~~~~~la~~~~~~~~~~~K~~~~----~~~~~~~~~~R~~~a~l~l~~~~~~-~~~~-------~~--------------   67 (293)
T PRK10532         14 ILLLLIAMASIQSGASLAKSLFP----LVGAPGVTALRLALGTLILIAIFKP-WRLR-------FA--------------   67 (293)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHH----HcCHHHHHHHHHHHHHHHHHHHHhH-Hhcc-------CC--------------
Confidence            45666667777777777775543    2677788888877765444333211 1100       00              


Q ss_pred             HHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          121 LQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       121 ~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                         .|+.......++++...+.+.|++++|+|++...++..+.|+++++++.    |+.+..+|  +.+.++|+.++..+
T Consensus        68 ---~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~~~--~~i~~~Gv~li~~~  138 (293)
T PRK10532         68 ---KEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDFVW--VVLAVLGLWFLLPL  138 (293)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHHHH--HHHHHHHHheeeec
Confidence               0112234455566788899999999999999999999999999998873    55555444  56678998876432


Q ss_pred             CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 015117          201 SLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDI  280 (413)
Q Consensus       201 ~~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~  280 (413)
                      +.+.+    +  ....|.++.++++++++++.++.+|..+++   +......+ .+++.+...+...    ..+..    
T Consensus       139 ~~~~~----~--~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~---~~~~~~~~-~~~~~~~l~~~~~----~~~~~----  200 (293)
T PRK10532        139 GQDVS----H--VDLTGAALALGAGACWAIYILSGQRAGAEH---GPATVAIG-SLIAALIFVPIGA----LQAGE----  200 (293)
T ss_pred             CCCcc----c--CChHHHHHHHHHHHHHHHHHHHHHHHhccC---CchHHHHH-HHHHHHHHHHHHH----HccCc----
Confidence            21111    1  124589999999999999999999987654   23333333 2334333333222    12211    


Q ss_pred             ccCChhHHHHHHHHHHH-----HHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          281 LQGHSKATMLLICNNAA-----QGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       281 ~~g~~~~~~~~il~~ai-----ggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                       ..+++..|...++.++     +-.+..+.+|+.++...+...++.++++.+++++++||+++..+++|+++|+.|+..+
T Consensus       201 -~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~  279 (293)
T PRK10532        201 -ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS  279 (293)
T ss_pred             -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence             1123333333333333     3335556778889999999999999999999999999999999999999999999888


Q ss_pred             ccc
Q 015117          356 FSP  358 (413)
Q Consensus       356 ~~~  358 (413)
                      ...
T Consensus       280 ~~~  282 (293)
T PRK10532        280 TLT  282 (293)
T ss_pred             Hhc
Confidence            654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.72  E-value=3.5e-15  Score=145.53  Aligned_cols=210  Identities=12%  Similarity=0.099  Sum_probs=142.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 015117          130 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSAL  209 (413)
Q Consensus       130 ~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~~  209 (413)
                      ...-++....++.+.+.++++.|++....+.++.|+++++++++++|||++++||+++++.++|+.++..++. +.    
T Consensus        66 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~-~~----  140 (281)
T TIGR03340        66 LAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF-AQ----  140 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc-cc----
Confidence            3444556889999999999999999999999999999999999999999999999999999999998764321 11    


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHH-HHHHHHHHhhcCCCccccccCChhHH
Q 015117          210 GLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFN-FLGIVITAMFKGPSSFDILQGHSKAT  288 (413)
Q Consensus       210 ~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~-l~~ll~~~~~~~~~~~~~~~g~~~~~  288 (413)
                         ....|..++++++++++++.++.|+..++.   +......+...++.++. .+...... ..+...   ....+...
T Consensus       141 ---~~~~g~~~~l~aal~~a~~~i~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~  210 (281)
T TIGR03340       141 ---HRRKAYAWALAAALGTAIYSLSDKAAALGV---PAFYSALGYLGIGFLAMGWPFLLLYL-KRHGRS---MFPYARQI  210 (281)
T ss_pred             ---cchhHHHHHHHHHHHHHHhhhhccccccch---hcccccHHHHHHHHHHHHHHHHHHHH-HHhccc---hhhhHHHH
Confidence               112366778889999999998877764432   11111112222222221 22211111 111110   00111111


Q ss_pred             H----HHHHHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Q 015117          289 M----LLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ  354 (413)
Q Consensus       289 ~----~~il~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~l  354 (413)
                      |    ...+..+++..+....+++.+....+...+++++++.+++++++||+++..+++|+++|+.|+++
T Consensus       211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            2    12223333334444566777766666677789999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.65  E-value=7e-13  Score=127.61  Aligned_cols=210  Identities=18%  Similarity=0.203  Sum_probs=150.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLK-IIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS  207 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~-llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~  207 (413)
                      ......+.....+.+.|.++++++++...++.++.|++++++++ +++|||+++++|.++++.++|+.++..++..+.. 
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~-  150 (292)
T COG0697          72 LLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI-  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh-
Confidence            45566667889999999999999999999999999999999997 7779999999999999999999998765432111 


Q ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCccccccCChh
Q 015117          208 ALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQN-LFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSK  286 (413)
Q Consensus       208 ~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n-~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~  286 (413)
                          . ...|.++.++++++.+++.++.|+.. +.  .+....- .++.  +..+    +.........   +  ...+.
T Consensus       151 ----~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~--~~~~----~~~~~~~~~~---~--~~~~~  211 (292)
T COG0697         151 ----L-SLLGLLLALAAALLWALYTALVKRLS-RL--GPVTLALLLQLL--LALL----LLLLFFLSGF---G--APILS  211 (292)
T ss_pred             ----H-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC--ChHHHHHHHHHH--HHHH----HHHHHHhccc---c--ccCCH
Confidence                0 24588999999999999999999987 32  2221111 1111  1111    1111111111   0  11222


Q ss_pred             HHHHHHH-----HHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhccc
Q 015117          287 ATMLLIC-----NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP  358 (413)
Q Consensus       287 ~~~~~il-----~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~  358 (413)
                      ..|..+.     ..+++..+....++..+....+......++++.+++++++||+++..+++|.++++.|+.+.+..
T Consensus       212 ~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         212 RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            2333332     33334445556667777777777778899999999999999999999999999999999888764

>TIGR00688 rarD rarD protein

Probab=99.59  E-value=6.1e-13  Score=127.79  Aligned_cols=249  Identities=11%  Similarity=0.009  Sum_probs=159.3

Q ss_pred             HHHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHH
Q 015117           40 NVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFI  119 (413)
Q Consensus        40 ~vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (413)
                      .++++...++.++..+++.|+. .    ..+|.++++.+-++..++-..++...++++.  .++..+.            
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~~-~----~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~--~~~~~~~------------   63 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKLL-K----PLPATDILGHRMIWSFPFMLLSVTLFRQWAA--LIERLKR------------   63 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHh-c----cCCHHHHHHHHHHHHHHHHHHHHHHHcchHH--HHHHHhC------------
Confidence            4567777888999999998862 1    2778999999988765443333222221100  0000000            


Q ss_pred             HHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Q 015117          120 LLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL  199 (413)
Q Consensus       120 ~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~  199 (413)
                       .+..+......+.+++..+++.+.|++++++++++..++.++.|+++++++++++|||++++||+++++.++|++++..
T Consensus        64 -~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        64 -IQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             -cccchHHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence             0001112346777888899999999999999999999999999999999999999999999999999999999988753


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 015117          200 RSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFD  279 (413)
Q Consensus       200 ~~~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~  279 (413)
                      ++   ++      .   . +++++++++++++.++.++..+++   ..  +.....+...++..+..+    ..+.....
T Consensus       143 ~~---~~------~---~-~~~l~aa~~~a~~~i~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~  200 (256)
T TIGR00688       143 LK---GS------L---P-WEALVLAFSFTAYGLIRKALKNTD---LA--GFCLETLSLMPVAIYYLL----QTDFATVQ  200 (256)
T ss_pred             Hc---CC------c---h-HHHHHHHHHHHHHHHHHhhcCCCC---cc--hHHHHHHHHHHHHHHHHH----HhccCccc
Confidence            21   11      1   1 346778899999999998865422   11  111101111111111111    11111000


Q ss_pred             cccCChhHHHHHHH----HHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHH
Q 015117          280 ILQGHSKATMLLIC----NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAAL  332 (413)
Q Consensus       280 ~~~g~~~~~~~~il----~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~l  332 (413)
                      ...  +...|..++    ..+++..+....+|+.++...+...++.|+++.++++++
T Consensus       201 ~~~--~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       201 QTN--PFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             ccC--chhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            011  111222222    244555677788899999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.51  E-value=1.3e-14  Score=137.17  Aligned_cols=231  Identities=15%  Similarity=0.174  Sum_probs=161.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh-cChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 015117          129 LLAVPAFLYAINNYLKFIMQLY-FNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS  207 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~-l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~  207 (413)
                      .|++.-.++.+.|.+..+|+.+ ++.+...++++..++.+++++++++|||+|.+|+.+++++++|+++..+.+..++..
T Consensus        66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~  145 (330)
T KOG1583|consen   66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS  145 (330)
T ss_pred             hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence            5777778888889999999987 899999999999999999999999999999999999999999999987654433221


Q ss_pred             --------CCCCCc--chhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHH--------
Q 015117          208 --------ALGLPV--ATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVIT--------  269 (413)
Q Consensus       208 --------~~~~~~--~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~--------  269 (413)
                              ....+.  ...|+.+..++.+.|+..|+|+|..+|++.  ..|..+++   +.-.+++|.++..        
T Consensus       146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyG--Kh~~EalF---ytH~LsLP~Flf~~~div~~~  220 (330)
T KOG1583|consen  146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYG--KHWKEALF---YTHFLSLPLFLFMGDDIVSHW  220 (330)
T ss_pred             hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CChHHHHH---HHHHhccchHHHhcchHHHHH
Confidence                    001111  235777778889999999999999999973  44444444   4556666665431        


Q ss_pred             -HhhcCCC-ccccccCChhHHHHHHHHHHHHH-HHHHHHHHh---hhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHH
Q 015117          270 -AMFKGPS-SFDILQGHSKATMLLICNNAAQG-ILSSFFFKY---ADTILKKYSSTVATIFTGLASAALFGHTLTMNFIL  343 (413)
Q Consensus       270 -~~~~~~~-~~~~~~g~~~~~~~~il~~aigg-l~vs~v~Ky---~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~l  343 (413)
                       ..+.++. ....+...-+..|.-++.+.+.+ .++..|+-.   .++.+.+....++-.++.++|++.|.+++|++.++
T Consensus       221 ~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~l  300 (330)
T KOG1583|consen  221 RLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWL  300 (330)
T ss_pred             HHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHH
Confidence             0112211 00011111233444444444333 234333321   23444444555777899999999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCcCCC
Q 015117          344 GISIVFISMHQFFSPLSKVKD  364 (413)
Q Consensus       344 G~~LVi~gv~ly~~~~~~~~~  364 (413)
                      |+++|+.|+.+|.....+++.
T Consensus       301 Ga~lVF~Gt~~fa~~~~~~~~  321 (330)
T KOG1583|consen  301 GAALVFFGTLLFANVWNHPKA  321 (330)
T ss_pred             HHHHHHHHHHHHHHHHcCccc
Confidence            999999999999887777663

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.41  E-value=3.6e-13  Score=126.90  Aligned_cols=205  Identities=12%  Similarity=0.091  Sum_probs=140.1

Q ss_pred             HHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCC-----CCCCCcch
Q 015117          141 NYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS-----ALGLPVAT  215 (413)
Q Consensus       141 n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~-----~~~~~~~~  215 (413)
                      -.+.|+|++|++.+.+.++..+.|.+|++|++.+|||++|+..-++..+-+.||+++..++.-.|+.     ..+.....
T Consensus       111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~  190 (346)
T KOG4510|consen  111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI  190 (346)
T ss_pred             HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence            3899999999999999999999999999999999999999999999999999999987665321211     11111122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHH---
Q 015117          216 GAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLI---  292 (413)
Q Consensus       216 ~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~~~i---  292 (413)
                      .|....+.+++..+-..+..+++.|+- +  ..+...+....+.+.++++...    -|.    .--.+.+..|...   
T Consensus       191 ~gt~aai~s~lf~asvyIilR~iGk~~-h--~~msvsyf~~i~lV~s~I~~~~----ig~----~~lP~cgkdr~l~~~l  259 (346)
T KOG4510|consen  191 PGTVAAISSVLFGASVYIILRYIGKNA-H--AIMSVSYFSLITLVVSLIGCAS----IGA----VQLPHCGKDRWLFVNL  259 (346)
T ss_pred             CchHHHHHhHhhhhhHHHHHHHhhccc-c--EEEEehHHHHHHHHHHHHHHhh----ccc----eecCccccceEEEEEe
Confidence            366666777666666677788887863 1  1122223334444444443321    111    0111222222211   


Q ss_pred             -HHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhc
Q 015117          293 -CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  356 (413)
Q Consensus       293 -l~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~  356 (413)
                       +..-+|++++.+-++.-.+--.+..+++.++++.++.+++|||.||++.+.|+++|+.++....
T Consensus       260 GvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a  324 (346)
T KOG4510|consen  260 GVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA  324 (346)
T ss_pred             hhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence             2334466777766655444455688899999999999999999999999999999999875543

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.41  E-value=6.5e-12  Score=118.71  Aligned_cols=221  Identities=16%  Similarity=0.136  Sum_probs=164.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSA  208 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~  208 (413)
                      .|.+.|.+-.....|..-++.|++.++..+.+++|.+.+++.+.++=|+|+...++.|..++.+|.+.+.+.+....+  
T Consensus       108 tY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP--  185 (367)
T KOG1582|consen  108 TYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP--  185 (367)
T ss_pred             HhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC--
Confidence            577888888888888888999999999999999999999999999999999999999999999999999887643221  


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--ccccccCChh
Q 015117          209 LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS--SFDILQGHSK  286 (413)
Q Consensus       209 ~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~--~~~~~~g~~~  286 (413)
                         ..+..|++++-++-+++|+-|=.+||.+|..+..+ ..+.++-|..|.++.+..+.    ..|+.  .+.+...+++
T Consensus       186 ---NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss-~EmvfySy~iG~vflf~~mv----lTge~f~a~~fcaehp~  257 (367)
T KOG1582|consen  186 ---NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASS-SEMVFYSYGIGFVFLFAPMV----LTGELFSAWTFCAEHPV  257 (367)
T ss_pred             ---CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCc-ceEEEeeecccHHHHHHHHH----hcccchhhhHHHHhCcH
Confidence               23456888888888889999999999999864333 22223334444444444333    34431  1233344444


Q ss_pred             HHHHHHHHHH----HHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcccC
Q 015117          287 ATMLLICNNA----AQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL  359 (413)
Q Consensus       287 ~~~~~il~~a----iggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~~  359 (413)
                      .++...+.-+    +|...+-..+|..++.+....++.+--+|.++|+++|..|+|....-|..+|+.|+|+--.++
T Consensus       258 ~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  258 RTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            4443332222    233344455678888888888888889999999999999999999999999999999765533

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.32  E-value=8.1e-12  Score=123.07  Aligned_cols=224  Identities=15%  Similarity=0.225  Sum_probs=159.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSA  208 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~  208 (413)
                      ...-.|+.+++...+...++++++.+.+|+++.+.|++|.++++++.+|++++.-|++++....||.+....+       
T Consensus        85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e-------  157 (316)
T KOG1441|consen   85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE-------  157 (316)
T ss_pred             HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-------
Confidence            4555688899999999999999999999999999999999999999999999999999999999998876522       


Q ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHH--HhhcCCCccc-cccCCh
Q 015117          209 LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVIT--AMFKGPSSFD-ILQGHS  285 (413)
Q Consensus       209 ~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~--~~~~~~~~~~-~~~g~~  285 (413)
                        ...+..|.+..+++.+..++..++.+++++++ +.+..-.|..  .+-..+++..++..  ...+++...+ ....|+
T Consensus       158 --~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~-~~~~~~~~ll--~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~  232 (316)
T KOG1441|consen  158 --LSFNLFGFISAMISNLAFALRNILSKKLLTSK-GESLNSMNLL--YYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWF  232 (316)
T ss_pred             --ccccHHHHHHHHHHHHHHHHHHHHHHHhhhcc-ccccCchHHH--HHhhhHHHHHHhcchHhhhcccceeeeeccccc
Confidence              12456799999999999999999999999643 2233222222  22233333322211  1122221100 122344


Q ss_pred             hHHHHHHHHH---HHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcccCCcC
Q 015117          286 KATMLLICNN---AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV  362 (413)
Q Consensus       286 ~~~~~~il~~---aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~~~~~  362 (413)
                      ...+..++++   -..++....++.+.++++-..+..+.-++..+.|+++|++++|+...+|+++-+.|+++|++-+.+.
T Consensus       233 ~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~  312 (316)
T KOG1441|consen  233 VTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKE  312 (316)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhh
Confidence            3333333332   1123455566677777776666666667778889999999999999999999999999999855544


Q ss_pred             CC
Q 015117          363 KD  364 (413)
Q Consensus       363 ~~  364 (413)
                      ++
T Consensus       313 ~~  314 (316)
T KOG1441|consen  313 KK  314 (316)
T ss_pred             hc
Confidence            43

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.27  E-value=3e-09  Score=104.55  Aligned_cols=209  Identities=16%  Similarity=0.112  Sum_probs=141.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChHHHHHHhh-hhHHHHHHHHHHHhcCCCCHHH----HHHHHHHHHHHHHhhcCCCCC
Q 015117          130 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSN-LKVFVIALLLKIIMKRRFSIIQ----WEALALLLIGISVNQLRSLPE  204 (413)
Q Consensus       130 ~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q-~k~l~tAlls~llL~~kls~~q----w~al~Ll~~GV~lv~~~~~~~  204 (413)
                      -.+.+++..+.|.++|.+.+++..++...+.+ +.+++.++++.+++|||.++++    ++|+++.++|+.++...+..+
T Consensus        62 g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~  141 (290)
T TIGR00776        62 GLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKS  141 (290)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccc
Confidence            34455668999999999999999999999999 8899999999999999999999    999999999998875543211


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHH---HHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 015117          205 GTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYH---QNLFLYGYGAIFNFLGIVITAMFKGPSSFDIL  281 (413)
Q Consensus       205 ~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~---~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~  281 (413)
                      .+ .........|+.+.++++++.+++.+..|+. + +  .+...   +..-+.+.+++++.+.      .+..    .+
T Consensus       142 ~~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-~-~--~~~~~~~~~~~g~~~~~~~~~~~~------~~~~----~~  206 (290)
T TIGR00776       142 AG-IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-G-V--DGLSVLLPQAIGMVIGGIIFNLGH------ILAK----PL  206 (290)
T ss_pred             cc-cccccchhhHHHHHHHHHHHHHHHHHHHHHc-C-C--CcceehhHHHHHHHHHHHHHHHHH------hccc----ch
Confidence            10 0000111348899999999999999998875 2 2  12222   2222222333332211      0110    01


Q ss_pred             cCChhHHHHHHHH---HHHHHHHHHHHHH-hhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHH----HHHHHHHHHHH
Q 015117          282 QGHSKATMLLICN---NAAQGILSSFFFK-YADTILKKYSSTVATIFTGLASAALFGHTLTMNFI----LGISIVFISMH  353 (413)
Q Consensus       282 ~g~~~~~~~~il~---~aiggl~vs~v~K-y~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~----lG~~LVi~gv~  353 (413)
                        .+...|..++.   .+++..+.....+ +.+........+..++.+.++++++++|+.+..++    +|.++++.|+.
T Consensus       207 --~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~  284 (290)
T TIGR00776       207 --KKYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN  284 (290)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence              11122222221   2333323323335 66666666777789999999999999999999999    99999999987


Q ss_pred             Hh
Q 015117          354 QF  355 (413)
Q Consensus       354 ly  355 (413)
                      +-
T Consensus       285 l~  286 (290)
T TIGR00776       285 IL  286 (290)
T ss_pred             HH
Confidence            64

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.27  E-value=5e-10  Score=107.81  Aligned_cols=262  Identities=18%  Similarity=0.221  Sum_probs=171.8

Q ss_pred             CCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHHHhhhhhh-HHHHHHHHHHHHHH
Q 015117           64 DGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNV-LLAVPAFLYAINNY  142 (413)
Q Consensus        64 ~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~vpAlly~~~n~  142 (413)
                      ++.++| |..++-+.-++|+.++............ ..|...                 .|++.+ .++..|+.-++.-.
T Consensus        39 ~~~f~f-PLf~ts~h~~v~flfa~~~~~l~~~~~~-r~r~~~-----------------sw~~~Lr~~aPtalata~DIG   99 (349)
T KOG1443|consen   39 TKNFHF-PLFVTSLHLAVKFLFAALSRRLYQCSVP-RARVVL-----------------SWRDYLRRLAPTALATALDIG   99 (349)
T ss_pred             hcCcCC-chHHHHHHHHHHHHHHHHHHHHHhccCC-ccccCC-----------------cHHHHHHHhhhhhhhhhcccc
Confidence            344666 4677788999999988775433332211 111211                 233333 34555666777888


Q ss_pred             HHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCcchhHHHHHH
Q 015117          143 LKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTL  222 (413)
Q Consensus       143 L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~~~~~~~~~G~ll~L  222 (413)
                      +..++++|++.+.|++++++.++|+-+|+..+-=||.++.-...+++..+|+.+....+.+         .+..|.++++
T Consensus       100 LSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq---------f~i~Gf~lv~  170 (349)
T KOG1443|consen  100 LSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ---------FNIEGFFLVL  170 (349)
T ss_pred             cccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc---------eeehhHHHHH
Confidence            9999999999999999999999999999999988999998888888999999988765431         3345899999


Q ss_pred             HHHHHHHHHHHHHHHhhcccC--CCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---cccccCChh-HHHHHHHHHH
Q 015117          223 IFVTVPSLASVFNEYALKSQY--DTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS---FDILQGHSK-ATMLLICNNA  296 (413)
Q Consensus       223 ~a~~~sg~a~Vy~EkllK~~~--~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~---~~~~~g~~~-~~~~~il~~a  296 (413)
                      ++++++|+...+.++++++++  ..++.....++.-+-.+..+|   ....+||+..   ...|+..+. ..|-.+...+
T Consensus       171 ~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~---~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~  247 (349)
T KOG1443|consen  171 AASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLP---LSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS  247 (349)
T ss_pred             HHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHH---HHHHHcccccchhhhHHHhcCccHHHHHHHHHH
Confidence            999999999999999999762  122222223332222222222   2334566531   122222222 1233333444


Q ss_pred             HHHHHHHHHHHh--------hhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          297 AQGILSSFFFKY--------ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       297 iggl~vs~v~Ky--------~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      ++|.+ ++.+-.        .+.++-+.+-...-+.+.+++..+.+++++..-++|..+...|+..|..
T Consensus       248 l~g~l-aF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  248 LGGLL-AFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHH-HHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            45542 222222        2333333344344467888999999999999999999999999988844

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.24  E-value=1.3e-08  Score=97.93  Aligned_cols=272  Identities=18%  Similarity=0.223  Sum_probs=166.6

Q ss_pred             HHHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHH
Q 015117           40 NVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFI  119 (413)
Q Consensus        40 ~vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (413)
                      ++++-....+.+|..|...|+-+.-     ++..+.--+=+....+.+.++...++.+     ...+             
T Consensus         8 Gil~~l~Ay~lwG~lp~y~kll~~~-----~~~eIlahRviwS~~~~l~ll~~~r~~~-----~~~~-------------   64 (293)
T COG2962           8 GILLALLAYLLWGLLPLYFKLLEPL-----PATEILAHRVIWSFPFMLALLFLLRQWR-----ELKQ-------------   64 (293)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHH-------------
Confidence            3445555777888888777654432     2334443443444444444333222211     0000             


Q ss_pred             HHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Q 015117          120 LLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL  199 (413)
Q Consensus       120 ~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~  199 (413)
                      ..+.+|....+.+-+++-..|=.++-+|..+=..-..++=+...|++..+++.+++|||+++.||+|+++..+||..-..
T Consensus        65 ~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          65 LLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            13455666677777777777777777888887888889999999999999999999999999999999999999988654


Q ss_pred             CCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 015117          200 RSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFD  279 (413)
Q Consensus       200 ~~~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~  279 (413)
                      ..   +    +.|.  ..    +.-++..|+++ ..||.+|-....++-..++.+...+.    ..++  . .++..+  
T Consensus       145 ~~---g----~lpw--va----l~la~sf~~Yg-l~RK~~~v~a~~g~~lE~l~l~p~al----~yl~--~-l~~~~~--  201 (293)
T COG2962         145 LL---G----SLPW--VA----LALALSFGLYG-LLRKKLKVDALTGLTLETLLLLPVAL----IYLL--F-LADSGQ--  201 (293)
T ss_pred             Hc---C----CCcH--HH----HHHHHHHHHHH-HHHHhcCCchHHhHHHHHHHHhHHHH----HHHH--H-HhcCch--
Confidence            32   1    1221  11    22234557766 45665664322233333333322111    1111  1 122111  


Q ss_pred             cccCChhHHH-HHHHHHHHHHH---HHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          280 ILQGHSKATM-LLICNNAAQGI---LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       280 ~~~g~~~~~~-~~il~~aiggl---~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                      +....+...| +.++...+..+   +.+..-|...=.+-++.++++|.+-.+++++++||+++..++++.+.+-.|+.+|
T Consensus       202 ~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~  281 (293)
T COG2962         202 FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALF  281 (293)
T ss_pred             hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            2221222222 22332222222   2223335566668899999999999999999999999999999999999998888


Q ss_pred             cc
Q 015117          356 FS  357 (413)
Q Consensus       356 ~~  357 (413)
                      ..
T Consensus       282 ~~  283 (293)
T COG2962         282 SI  283 (293)
T ss_pred             HH
Confidence            65

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.22  E-value=7.9e-10  Score=109.04  Aligned_cols=226  Identities=15%  Similarity=0.198  Sum_probs=155.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 015117          130 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSAL  209 (413)
Q Consensus       130 ~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~~  209 (413)
                      ...-+.+.++.|.....||.+.+.+..++++++.=+||-.++.++.+||+|..+.+++++-+.||+++...+...+++..
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~  241 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLP  241 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCC
Confidence            44456678899999999999999999999999999999999999999999999999999999999999877543322211


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHH----HHHHHhhcCCCccccccCCh
Q 015117          210 GLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLG----IVITAMFKGPSSFDILQGHS  285 (413)
Q Consensus       210 ~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~----ll~~~~~~~~~~~~~~~g~~  285 (413)
                      . .....|.++.+++++..|.+.+..+|-..++ +...- .++++.+.|. ++++.    +++-..+ +.+.   |.-.+
T Consensus       242 a-~~~llG~llaL~sA~~YavY~vllk~~~~~e-g~rvd-i~lffGfvGL-fnllllwP~l~iL~~~-~~e~---F~lP~  313 (416)
T KOG2765|consen  242 A-SRPLLGNLLALLSALLYAVYTVLLKRKIGDE-GERVD-IQLFFGFVGL-FNLLLLWPPLIILDFF-GEER---FELPS  313 (416)
T ss_pred             c-cchhHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccc-HHHHHHHHHH-HHHHHHhHHHHHHHHh-ccCc---ccCCC
Confidence            1 1135688999999888888887777755443 11221 2334444443 33322    2221122 3221   22122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHH-----hhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcccCC
Q 015117          286 KATMLLICNNAAQGILSSFFFK-----YADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS  360 (413)
Q Consensus       286 ~~~~~~il~~aiggl~vs~v~K-----y~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~~~  360 (413)
                      ......++..++.|.+++=.++     ..++.+.+.+.++++.++++...++=|.++|+.+++|...|+.|-++.|.+..
T Consensus       314 ~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  314 STQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             CceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            2222233344456666663332     24555666666788899999999999999999999999999999887776544


Q ss_pred             cCC
Q 015117          361 KVK  363 (413)
Q Consensus       361 ~~~  363 (413)
                      ...
T Consensus       394 ~~~  396 (416)
T KOG2765|consen  394 NSK  396 (416)
T ss_pred             ccc
Confidence            433

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.15  E-value=9.4e-09  Score=100.02  Aligned_cols=226  Identities=13%  Similarity=0.185  Sum_probs=152.9

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Q 015117          125 RNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPE  204 (413)
Q Consensus       125 r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~  204 (413)
                      +...++.-++++|...-.-.-.+++|++.+++.++++..|+.||+.-.+++|+|.+..-|.++++..+|.......+.. 
T Consensus        75 ~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s-  153 (314)
T KOG1444|consen   75 RTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS-  153 (314)
T ss_pred             HHHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce-
Confidence            3445777888888887777778999999999999999999999999999999999999999999999998776543321 


Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-cc-ccc
Q 015117          205 GTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS-FD-ILQ  282 (413)
Q Consensus       205 ~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~-~~-~~~  282 (413)
                              .+..|+.+++..+++.+...+|.||..+.. +.+-|-    +..+--+++++...+.....|+.. .. -+.
T Consensus       154 --------f~~~gY~w~~~n~~~~a~~~v~~kk~vd~~-~l~~~~----lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~  220 (314)
T KOG1444|consen  154 --------FNLRGYSWALANCLTTAAFVVYVKKSVDSA-NLNKFG----LVFYNNLLSLPPLLILSFITGELDALSLNFD  220 (314)
T ss_pred             --------ecchhHHHHHHHHHHHHHHHHHHHHhhccc-ccccee----EEeehhHHHHHHHHHHHHHhcchHHHHhhcc
Confidence                    122488999999999999999999988864 222221    112222333333322222223211 00 011


Q ss_pred             CC-hhHHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          283 GH-SKATMLLICNNAAQGILSSFFF----KYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       283 g~-~~~~~~~il~~aiggl~vs~v~----Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      .+ ....|..+....+.|..+++..    +..++.+-..........+.+...+++|.+.++.-++|..+-+.|..+|+.
T Consensus       221 ~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  221 NWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence            12 2345555666666665555433    334444333333445567777788888999999999999999999888887


Q ss_pred             cCCcCCC
Q 015117          358 PLSKVKD  364 (413)
Q Consensus       358 ~~~~~~~  364 (413)
                      ...+.|+
T Consensus       301 ~~~~~k~  307 (314)
T KOG1444|consen  301 ATFRKKK  307 (314)
T ss_pred             hhhhhcc
Confidence            4444433

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.12  E-value=4e-11  Score=113.56  Aligned_cols=229  Identities=13%  Similarity=0.151  Sum_probs=172.9

Q ss_pred             HhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015117          122 QAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  201 (413)
Q Consensus       122 ~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~  201 (413)
                      +..|+..++.+.=++-...||+   .++|++.+-|++-+++..+|+.++++++||+|-+..-..+.++.+.|--+   ..
T Consensus       100 ~t~r~vlplsvVfi~mI~fnnl---cL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l---Gv  173 (347)
T KOG1442|consen  100 ATARQVLPLSVVFILMISFNNL---CLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL---GV  173 (347)
T ss_pred             HHHHhhcchhheeeeehhccce---ehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee---cc
Confidence            3445555555544444444554   89999999999999999999999999999999988777666666666433   12


Q ss_pred             CCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 015117          202 LPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDIL  281 (413)
Q Consensus       202 ~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~  281 (413)
                      +.|+.   ..+.++.|.++++.++++-++-++|.+|.+-.- ++.+|..+++...++.++.+|.+++....+  +..++-
T Consensus       174 dqE~~---~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v-~~~iw~lt~ynnv~a~lLflpll~lnge~~--~v~~~~  247 (347)
T KOG1442|consen  174 DQEGS---TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPV-GDCIWRLTAYNNVNALLLFLPLLILNGEFQ--AVVGFP  247 (347)
T ss_pred             ccccc---cCccchhhhHHHHHHHHHHHHHHHhhheecccc-cCeehhhHHHHHHHHHHHHHHHHHHcchHH--HHcCcc
Confidence            22322   234567799999999999999999999877654 678999999999999988888765421111  122344


Q ss_pred             cCChhHHHHHHHHHHHHHHHHHHHH----HhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          282 QGHSKATMLLICNNAAQGILSSFFF----KYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       282 ~g~~~~~~~~il~~aiggl~vs~v~----Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      +-+++..|.++.+.++.|..++++.    |-.+.++.+...+..-..-.++.+.+++|..+...|-|-.+|+.|...|+.
T Consensus       248 ~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  248 HLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence            5567788988888899998888775    666777777777777777888899999999999999999999999999987


Q ss_pred             cCCcC
Q 015117          358 PLSKV  362 (413)
Q Consensus       358 ~~~~~  362 (413)
                      .+...
T Consensus       328 vk~~e  332 (347)
T KOG1442|consen  328 VKEHE  332 (347)
T ss_pred             HHHHH
Confidence            54433

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.89  E-value=4.7e-10  Score=105.46  Aligned_cols=213  Identities=15%  Similarity=0.225  Sum_probs=150.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 015117          130 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSAL  209 (413)
Q Consensus       130 ~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~~  209 (413)
                      |.+-|+..+-.|.+.-.|.+|.+....+++-.-.++.+.+++|++||.|+...|..++++...||.++..++...++...
T Consensus        81 Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~ag  160 (336)
T KOG2766|consen   81 YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAG  160 (336)
T ss_pred             hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccC
Confidence            78888888888888889999999999999999999999999999999999999999999999999887666543333222


Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHH
Q 015117          210 GLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATM  289 (413)
Q Consensus       210 ~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~  289 (413)
                      |. ....|+.++++++.+.|..++..|.+.|+-   +.....-++.++|.+++.+-++    .+....  .--+|++...
T Consensus       161 gs-np~~GD~lvi~GATlYaVSNv~EEflvkn~---d~~elm~~lgLfGaIIsaIQ~i----~~~~~~--~tl~w~~~i~  230 (336)
T KOG2766|consen  161 GS-NPVKGDFLVIAGATLYAVSNVSEEFLVKNA---DRVELMGFLGLFGAIISAIQFI----FERHHV--STLHWDSAIF  230 (336)
T ss_pred             CC-CCccCcEEEEecceeeeeccccHHHHHhcC---cHHHHHHHHHHHHHHHHHHHHh----hhccce--eeEeehHHHH
Confidence            22 123588889999999999999999999963   5556677888999988776533    221110  0122333222


Q ss_pred             HHHHHHHH----HHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          290 LLICNNAA----QGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       290 ~~il~~ai----ggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                      ..+. .++    .-.++..++|..++..-+...-.+=.++.++  ..||-+.+|...+..+.+..|.++|
T Consensus       231 ~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiY  297 (336)
T KOG2766|consen  231 LYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIY  297 (336)
T ss_pred             HHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEe
Confidence            1111 111    1122333444444433333333333455554  6789999999999999999999999

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.86  E-value=8.9e-08  Score=84.31  Aligned_cols=138  Identities=16%  Similarity=0.195  Sum_probs=98.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccc----CCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc----cccc-CC--h
Q 015117          217 AYLYTLIFVTVPSLASVFNEYALKSQ----YDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSF----DILQ-GH--S  285 (413)
Q Consensus       217 G~ll~L~a~~~sg~a~Vy~EkllK~~----~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~----~~~~-g~--~  285 (413)
                      |.+++++++++.++..++.|+++|+.    .+.+.+....++...+.++.++..+.   .++....    .... ..  +
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~---~e~~~~~~~~~~~~~~~~~~~   77 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFL---LEGPQLSSFFSEIFGEELSSD   77 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHH---HhhhhhhhHHHHhhhhhhcch
Confidence            56788999999999999999999983    24555555556666676666655433   2332210    0111 11  2


Q ss_pred             hHHHHHHHHHHH----HHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          286 KATMLLICNNAA----QGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       286 ~~~~~~il~~ai----ggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      ...+..++..++    .+.....++++.++++.+....+..+++.++|+++|||++|...++|+++.+.|.++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   78 PNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            233333333332    344566788999999999999999999999999999999999999999999999999974

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.59  E-value=8.3e-07  Score=82.35  Aligned_cols=230  Identities=12%  Similarity=0.146  Sum_probs=145.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 015117          128 VLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS  207 (413)
Q Consensus       128 ~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~  207 (413)
                      -++..|+++-++.-+-.--+++|++.+.|.+.+++.++.+|..-++++|.|.+.....+.++..+.-.+....+.+...-
T Consensus        69 K~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~  148 (309)
T COG5070          69 KKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAF  148 (309)
T ss_pred             hhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHH
Confidence            35677777766555555568999999999999999999999999999999999999999988888766654433211100


Q ss_pred             CCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCccccccCChh
Q 015117          208 ALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVI-TAMFKGPSSFDILQGHSK  286 (413)
Q Consensus       208 ~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~-~~~~~~~~~~~~~~g~~~  286 (413)
                       ...-.+ .|++++...|+.++..-...+|..|-.   +.  ......++.-++++|.++. +...++-.+.+.-.+++.
T Consensus       149 -~~~~lN-~GY~Wm~~NclssaafVL~mrkri~lt---Nf--~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~  221 (309)
T COG5070         149 -KAQILN-PGYLWMFTNCLSSAAFVLIMRKRIKLT---NF--KDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSV  221 (309)
T ss_pred             -HhcccC-CceEEEehhhHhHHHHHHHHHHhhccc---cc--chhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCCh
Confidence             000111 278888888887776656666655532   11  1112223444555565443 223333222233444544


Q ss_pred             HHHHHHHHHHHHHH----HHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcccCCcC
Q 015117          287 ATMLLICNNAAQGI----LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV  362 (413)
Q Consensus       287 ~~~~~il~~aiggl----~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~~~~~  362 (413)
                      -....++..++...    +.++..+-.++.+-+...++.-.-.++.|.++||++.+...+..+.+=+.+..+|...++++
T Consensus       222 d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k  301 (309)
T COG5070         222 DSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKK  301 (309)
T ss_pred             HHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33222222222222    33344444444444455555556788999999999999999999999998888887755544


Q ss_pred             CC
Q 015117          363 KD  364 (413)
Q Consensus       363 ~~  364 (413)
                      +.
T Consensus       302 ~q  303 (309)
T COG5070         302 QQ  303 (309)
T ss_pred             Hh
Confidence            33

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.55  E-value=2.2e-06  Score=72.24  Aligned_cols=68  Identities=29%  Similarity=0.385  Sum_probs=61.5

Q ss_pred             HHHH-HHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCC
Q 015117          134 AFLY-AINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSL  202 (413)
Q Consensus       134 Ally-~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~  202 (413)
                      +++. ..++.+.++|+++.| +...++.++.|+++++++++++|||+++++|.++++.++|++++..++.
T Consensus        41 g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   41 GLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            5544 488999999999999 5888999999999999999999999999999999999999999977653

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.51  E-value=1e-06  Score=73.85  Aligned_cols=108  Identities=24%  Similarity=0.327  Sum_probs=82.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHHHhhhhhhHHHHHHHH-HHHHHHHHHHH
Q 015117           69 FSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAARNNVLLAVPAFL-YAINNYLKFIM  147 (413)
Q Consensus        69 y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~vpAll-y~~~n~L~f~a  147 (413)
                      +++...++.+.+...+ .+.+.....+..    ....                 ..++.....+.+++ ..+.+.+.+.+
T Consensus        17 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~a   74 (126)
T PF00892_consen   17 ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNL-----------------SPRQWLWLLFLGLLGTALAYLLYFYA   74 (126)
T ss_pred             CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCC-----------------ChhhhhhhhHhhccceehHHHHHHHH
Confidence            6677888888888876 443333322211    0001                 11223345666666 58999999999


Q ss_pred             HhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015117          148 QLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  198 (413)
Q Consensus       148 l~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~  198 (413)
                      +++++++..+++.++.|+++++++++++||+++++||+++++.++|+.++.
T Consensus        75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   75 LKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998763

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.48  E-value=1.2e-06  Score=74.67  Aligned_cols=129  Identities=19%  Similarity=0.296  Sum_probs=97.4

Q ss_pred             HHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHHHhhh
Q 015117           46 GDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILLQAAR  125 (413)
Q Consensus        46 ~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  125 (413)
                      .+++.++.-+++-|.--+    .-+|..+-+.+.+.-+.++..+....++.+..++-.                    .|
T Consensus        10 LsA~fa~L~~iF~KIGl~----~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~--------------------~k   65 (140)
T COG2510          10 LSALFAGLTPIFAKIGLE----GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIG--------------------PK   65 (140)
T ss_pred             HHHHHHHHHHHHHHHhcc----ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccC--------------------cc
Confidence            366677777777654222    245666677888888888888777766654332211                    22


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015117          126 NNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  198 (413)
Q Consensus       126 ~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~  198 (413)
                      ....+.+-++.-.+.-.++|.|++.=+++...=+..+.+++++++++++||||++..||+++++..+|++++.
T Consensus        66 ~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          66 SWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             eehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            2224445555667888899999999999999999999999999999999999999999999999999998764

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.44  E-value=7.1e-05  Score=71.01  Aligned_cols=203  Identities=15%  Similarity=0.033  Sum_probs=126.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 015117          131 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALG  210 (413)
Q Consensus       131 ~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~~~  210 (413)
                      .+=++.-...|.++|.+++.+|.++..-+-.+.|+..|++    ..||..-.-|+++.++-++..+...++        .
T Consensus        75 ~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~----~sRr~~d~vwvaLAvlGi~lL~p~~~~--------~  142 (292)
T COG5006          75 LAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALL----SSRRLRDFVWVALAVLGIWLLLPLGQS--------V  142 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHH----hccchhhHHHHHHHHHHHHhheeccCC--------c
Confidence            3334556688999999999999999999999999988765    457776666777766655544432111        1


Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHH
Q 015117          211 LPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATML  290 (413)
Q Consensus       211 ~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~~  290 (413)
                      .+.+..|..+.+.+..||+.+-+..+|.-+..  ...--...-| .++.++.+|.-.    .+...  .++   ++....
T Consensus       143 ~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~g~~g~a~gm-~vAaviv~Pig~----~~ag~--~l~---~p~ll~  210 (292)
T COG5006         143 WSLDPVGVALALGAGACWALYIVLGQRAGRAE--HGTAGVAVGM-LVAALIVLPIGA----AQAGP--ALF---SPSLLP  210 (292)
T ss_pred             CcCCHHHHHHHHHHhHHHHHHHHHcchhcccC--CCchHHHHHH-HHHHHHHhhhhh----hhcch--hhc---ChHHHH
Confidence            12345699999999999999999999987543  2221111222 122232222211    11110  111   121111


Q ss_pred             HHHHHHHHHHHHH-----HHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          291 LICNNAAQGILSS-----FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       291 ~il~~aiggl~vs-----~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      .-+..++-+..+-     ..++..+.-.-+...++.+.+.++.+++++||.+|..+|+|+++|+.+..-.+.
T Consensus       211 laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         211 LALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            1122222222222     344555544444555678899999999999999999999999999998764443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.37  E-value=9.4e-06  Score=71.34  Aligned_cols=146  Identities=17%  Similarity=0.247  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHhhhhhhheec-ccC--CcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHH
Q 015117           42 ALVVGDCILVGLQPILVFTT-KVD--GGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISF  118 (413)
Q Consensus        42 l~v~~~~~~~~~~~il~~~s-~~~--g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (413)
                      ++...+.+..+.+.++++.. +++  .+...++....+..-..-.++.........+.............+.        
T Consensus         3 ~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~--------   74 (153)
T PF03151_consen    3 ILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEEL--------   74 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhh--------
Confidence            34445555666665555422 221  2235778888888888887777665443332211000000000000        


Q ss_pred             HHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015117          119 ILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  197 (413)
Q Consensus       119 ~~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv  197 (413)
                        .+..+........+++..+.|...|..+++++|.+++++.+.|.+.+.++++++++|+++..|+.|+++.++|+.+-
T Consensus        75 --~~~~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   75 --SSDPNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             --cchHHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence              00223345677788889999999999999999999999999999999999999999999999999999999998763

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.35  E-value=4.1e-06  Score=76.50  Aligned_cols=212  Identities=15%  Similarity=0.138  Sum_probs=136.9

Q ss_pred             HHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCc
Q 015117          134 AFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPV  213 (413)
Q Consensus       134 Ally~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~~~~~~~~~~~~~  213 (413)
                      +++.+..|+++-.|+..++|+..+-+..+.-.++-++++..||.|+...+.++.++...|++++.+.+...       ..
T Consensus        60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~-------a~  132 (290)
T KOG4314|consen   60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH-------AD  132 (290)
T ss_pred             EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh-------hh
Confidence            34567889999999999999999999999999999999999999999999999999999999887654211       12


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhccc--CCCchHHHHHHHHHHHHHHHH-HHHHHHHhhcCCCccccccCChhHHHH
Q 015117          214 ATGAYLYTLIFVTVPSLASVFNEYALKSQ--YDTSIYHQNLFLYGYGAIFNF-LGIVITAMFKGPSSFDILQGHSKATML  290 (413)
Q Consensus       214 ~~~G~ll~L~a~~~sg~a~Vy~EkllK~~--~~~s~~~~n~~l~~~g~l~~l-~~ll~~~~~~~~~~~~~~~g~~~~~~~  290 (413)
                      .+.|+.+.+++++.++++-|.+++..-+-  .|.+.+  .--+.++-.++.- |.+++.  +.+.+.   ++.+....|.
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~F--mS~LGF~NL~~~~~~~lIL~--~T~VE~---~qsFA~~PWG  205 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHF--MSCLGFFNLCFISFPALILA--FTGVEH---LQSFAAAPWG  205 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHH--HHHHHHHHHHHHhhhHHHHH--HhchHH---HHHHhhCCch
Confidence            35688999999999999999988877642  122222  2223333333322 222221  233221   1111112233


Q ss_pred             HHHHHHHH----HHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcccC
Q 015117          291 LICNNAAQ----GILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL  359 (413)
Q Consensus       291 ~il~~aig----gl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~~  359 (413)
                      .++-.|.-    ...+-+-+-....++.+...-.++...+.+..++=+-..+..++.|..++++|-.+--.|.
T Consensus       206 ~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  206 CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence            32222111    1111111122333444444444555677778777777889999999999999976665543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.28  E-value=0.00011  Score=71.29  Aligned_cols=213  Identities=14%  Similarity=0.122  Sum_probs=126.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHH-hhhhHHHHHHHHHHHhcCCCCHHHHH----HHHHHHHHHHHhhcCC
Q 015117          127 NVLLAVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWE----ALALLLIGISVNQLRS  201 (413)
Q Consensus       127 ~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl-~q~k~l~tAlls~llL~~kls~~qw~----al~Ll~~GV~lv~~~~  201 (413)
                      .+.-.+-+++..+.+..+|.+.+++..+...=+ ..+.++.++++.+++++|--+..+|.    |++++.+|+.+...++
T Consensus        45 ~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~  124 (269)
T PF06800_consen   45 FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQD  124 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccc
Confidence            445677788899999999999999887655444 47888999999999999999998887    8888999999987765


Q ss_pred             CCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 015117          202 LPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDIL  281 (413)
Q Consensus       202 ~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~  281 (413)
                      ..++....+ ....-|++..+++.+...++.+..+. .+-++-.-+.-|.+-|.+.+.+++.        ....   .++
T Consensus       125 ~~~~~~~~~-~~~~kgi~~Ll~stigy~~Y~~~~~~-~~~~~~~~~lPqaiGm~i~a~i~~~--------~~~~---~~~  191 (269)
T PF06800_consen  125 KKSDKSSSK-SNMKKGILALLISTIGYWIYSVIPKA-FHVSGWSAFLPQAIGMLIGAFIFNL--------FSKK---PFF  191 (269)
T ss_pred             ccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHh-cCCChhHhHHHHHHHHHHHHHHHhh--------cccc---ccc
Confidence            433211001 11123666666666666665555443 2221111112222222222222111        1111   223


Q ss_pred             cCChhHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-hHHHHHHHHHHHHHHhCCCCcH----HHHHHHHHHHHHHH
Q 015117          282 QGHSKATMLLICNNAAQGILSSFFFKYADTILKKYS-STVATIFTGLASAALFGHTLTM----NFILGISIVFISMH  353 (413)
Q Consensus       282 ~g~~~~~~~~il~~aiggl~vs~v~Ky~~~i~k~~a-~s~~iv~t~lls~~lfg~~lt~----~~~lG~~LVi~gv~  353 (413)
                      +..++.-.+.=+.-+++.+..-+..+..+ ...+|. .-++++++.+.++++|+|.=+.    ..++|.++++.|..
T Consensus       192 ~k~~~~nil~G~~w~ignl~~~is~~~~G-~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  192 EKKSWKNILTGLIWGIGNLFYLISAQKNG-VATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             ccchHHhhHHHHHHHHHHHHHHHhHHhcc-chhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            33333222222222445544333333322 222332 2268899999999999998664    56789998888754

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.28  E-value=4.7e-05  Score=75.30  Aligned_cols=71  Identities=15%  Similarity=0.266  Sum_probs=63.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          128 VLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       128 ~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      |..++  +++.+.+.+.+.|+.+.|.+..+=+....+++.++++..+||||+++++|.+.++..+|..++...
T Consensus        53 W~~G~--~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   53 WWIGL--LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHHHH--HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            44443  467889999999999999999999999999999999999999999999999999999998876543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.18  E-value=2.6e-05  Score=65.27  Aligned_cols=118  Identities=17%  Similarity=0.242  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHH-----HHHHHHHHHHHHH
Q 015117          227 VPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKAT-----MLLICNNAAQGIL  301 (413)
Q Consensus       227 ~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~-----~~~il~~aiggl~  301 (413)
                      ++|..+++.++..++.   ++...+.+....+.+ .++....   .+...    ....+...     ...++..+++..+
T Consensus         2 ~~a~~~~~~k~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKKI---SPLSITFWRFLIAGI-LLILLLI---LGRKP----FKNLSPRQWLWLLFLGLLGTALAYLL   70 (126)
T ss_pred             eeeeHHHHHHHHhccC---CHHHHHHHHHHHHHH-HHHHHHh---hcccc----ccCCChhhhhhhhHhhccceehHHHH
Confidence            5788899999998863   444444454444443 2222221   11110    11122211     1222334556667


Q ss_pred             HHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          302 SSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       302 vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                      ....+|+.+.........+.++++.++++++++|+++...++|+.+++.|+++.
T Consensus        71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            778889998888888899999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.10  E-value=3.4e-05  Score=65.11  Aligned_cols=68  Identities=12%  Similarity=0.130  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015117          131 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  198 (413)
Q Consensus       131 ~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~  198 (413)
                      ++--++|.+...+.-.+++++|.+....+.++.++.+++++++++|||++.+||+++.+..+|++++.
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            33346789999999999999999999999999999999999999999999999999999999998874

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.04  E-value=6e-05  Score=64.42  Aligned_cols=127  Identities=15%  Similarity=0.207  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCc--hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHHHH
Q 015117          218 YLYTLIFVTVPSLASVFNEYALKSQYDTS--IYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNN  295 (413)
Q Consensus       218 ~ll~L~a~~~sg~a~Vy~EkllK~~~~~s--~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~~~il~~  295 (413)
                      ..+.+++++++|++.++.+--+++- |.+  -.+|+.-+    +++.....+    ..|+..  .-.+.+...|..+...
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi----~~~l~~v~~----~~g~~~--~~~~~~~k~~lflilS   73 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVI----LIFLLIVLL----VTGNWQ--AGGEIGPKSWLFLILS   73 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHH----HHHHHHHHH----hcCcee--cccccCcceehhhhHH
Confidence            4667889999999887776666643 222  12343332    222222222    233211  0111233444444333


Q ss_pred             ----HHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          296 ----AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       296 ----aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                          +++-++-.+.+|..++.........+++++.++|++++||++|..+++|+.++.+|..+.
T Consensus        74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv  137 (140)
T COG2510          74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence                333445556667666666667778899999999999999999999999999999997654

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.97  E-value=0.00021  Score=68.19  Aligned_cols=66  Identities=20%  Similarity=0.209  Sum_probs=58.6

Q ss_pred             HHHHHHH-HHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 015117          130 LAVPAFL-YAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGIS  195 (413)
Q Consensus       130 ~~vpAll-y~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~  195 (413)
                      ...-+++ ..+...+.+.++++.++++..++..+.|+++++++++++||+++..||.+..+.++|++
T Consensus       194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            3334443 56788889999999999999999999999999999999999999999999999999863

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.93  E-value=0.00012  Score=72.06  Aligned_cols=148  Identities=10%  Similarity=0.036  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHH
Q 015117           39 LNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISF  118 (413)
Q Consensus        39 l~vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (413)
                      .+.++...+++.|+.+.++.|....+  +++++.+..+.+-....+..+.+........      .. ...+.+.. .  
T Consensus       145 ~G~~~~l~a~~~~a~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~------~~-~~~~~~~~-~--  212 (302)
T TIGR00817       145 AGFLSAMISNITFVSRNIFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAFITEGPP------FL-PHGFMQAI-S--  212 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHHHHcchH------HH-HHHHHHhh-c--
Confidence            35566667777788877766532221  1355655555555555444444332211100      00 00000000 0  


Q ss_pred             HHHHhhhhhhH-HHHHHH-HHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 015117          119 ILLQAARNNVL-LAVPAF-LYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISV  196 (413)
Q Consensus       119 ~~~~~~r~~~~-~~vpAl-ly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~l  196 (413)
                        .......+. ..+.+. .|...|.+.|.+++++++.++++....+|++++++++++++|+++..|+++.++.++|+.+
T Consensus       213 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l  290 (302)
T TIGR00817       213 --GVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFL  290 (302)
T ss_pred             --ccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHH
Confidence              000001111 223443 5777788888999999999999999999999999999999999999999999999999999


Q ss_pred             hhcC
Q 015117          197 NQLR  200 (413)
Q Consensus       197 v~~~  200 (413)
                      .+..
T Consensus       291 ~~~~  294 (302)
T TIGR00817       291 YSRV  294 (302)
T ss_pred             HHHH
Confidence            8754

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.92  E-value=0.00021  Score=72.11  Aligned_cols=69  Identities=19%  Similarity=0.276  Sum_probs=64.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015117          130 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  198 (413)
Q Consensus       130 ~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~  198 (413)
                      ...-++.|.++|.+.|.++++++|.++++...+|++++.++++++++|+++..|++|.++.++|+.+.+
T Consensus       279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            344577899999999999999999999999999999999999999999999999999999999998864

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.73  E-value=0.00098  Score=67.59  Aligned_cols=63  Identities=8%  Similarity=0.081  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015117          139 INNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  201 (413)
Q Consensus       139 ~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~  201 (413)
                      +...+.+.++++++|+...+...+.|++++++++++|+|+++..|+++.++.++|+.+++.+.
T Consensus       268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            345577789999999999999999999999999999999999999999999999999987543

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.71  E-value=0.0023  Score=55.44  Aligned_cols=119  Identities=16%  Similarity=0.150  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHHHHH
Q 015117          217 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNA  296 (413)
Q Consensus       217 G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~~~il~~a  296 (413)
                      |++++++++++.+.+.+..++-+++.++.+.....  +   ..+.    ..     .+         ...+.+..+...+
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~---~~~~----~~-----~~---------p~~~i~lgl~~~~   59 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--I---AALL----AF-----GL---------ALRAVLLGLAGYA   59 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--H---HHHH----HH-----hc---------cHHHHHHHHHHHH
Confidence            67888888888888888888877764222211110  0   0000    00     00         0113344444444


Q ss_pred             HHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHH--HhCCCCcHHHHHHHHHHHHHHHHhccc
Q 015117          297 AQGILSSFFFKYADTILKKYSSTVATIFTGLASAA--LFGHTLTMNFILGISIVFISMHQFFSP  358 (413)
Q Consensus       297 iggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~--lfg~~lt~~~~lG~~LVi~gv~ly~~~  358 (413)
                      +.-.+-.+++|..|........+...++..++++.  +|||++|+.+++|+++|+.|+++.+..
T Consensus        60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            44455566777776555555555555666667764  899999999999999999999997763

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.65  E-value=0.0022  Score=63.03  Aligned_cols=64  Identities=20%  Similarity=0.247  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          137 YAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       137 y~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      -.++..+++.++++++++..+++..+.|++++++++++++|+++..||++.++.++|++.....
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            4467778899999999999999999999999999999999999999999999999999887654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.59  E-value=0.0026  Score=62.56  Aligned_cols=66  Identities=15%  Similarity=0.108  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          135 FLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       135 lly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      +.-.+...+.+.++++++++..+++..+.|++.+++++++++|+++..||++.++.+.|+.+....
T Consensus       223 ~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        223 AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            344567788899999999999999999999999999999999999999999999999999887543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.57  E-value=0.00099  Score=55.46  Aligned_cols=72  Identities=18%  Similarity=0.206  Sum_probs=63.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcChHH-HHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Q 015117          128 VLLAVPAFLYAINNYLKFIMQLYFNPAT-VKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL  199 (413)
Q Consensus       128 ~~~~vpAlly~~~n~L~f~al~~l~~~t-~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~  199 (413)
                      +...+-.+.|.+...+.-.+++++|.++ |.+-...-++.|++.+++++||+++..|++++.++.+|++....
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            3556677788999999999999999865 56777899999999999999999999999999999999988754

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.56  E-value=0.0029  Score=61.66  Aligned_cols=129  Identities=10%  Similarity=-0.018  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHH----H
Q 015117          218 YLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLI----C  293 (413)
Q Consensus       218 ~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~~~i----l  293 (413)
                      .++.++++++.+...+..|+..+++   +.. + .+....+.++..+...    .+...  ..+...+...|..+    +
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~---~~~-~-~~~~~~~~~~l~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~   71 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE---PDF-L-WWALLAHSVLLTPYGL----WYLAQ--VGWSRLPATFWLLLAISAV   71 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch---hHH-H-HHHHHHHHHHHHHHHH----Hhccc--CCCCCcchhhHHHHHHHHH
Confidence            4677888999999999999877753   221 1 2222333333333222    11100  00111111122222    2


Q ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          294 NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       294 ~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      ..+....+....+++.+........+..++++.+++++++||+++...++|+++.+.|+.+-..
T Consensus        72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            2334444556667888877777778889999999999999999999999999999999876543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.54  E-value=0.001  Score=56.96  Aligned_cols=73  Identities=11%  Similarity=0.187  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHH-hhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  201 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl-~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~  201 (413)
                      ...+..++|.+...+...+++++|.+...-+ .....+.+++.+++++||+++..||+++.+.++|++.+...+
T Consensus        32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            4566778899999999999999999776555 579999999999999999999999999999999999886543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.52  E-value=0.0014  Score=54.83  Aligned_cols=71  Identities=14%  Similarity=0.054  Sum_probs=62.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHH-HHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATV-KMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL  199 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~-~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~  199 (413)
                      ...+..++|.+...+...+++.+|.++. .+-.....+.+++.+++++||++++.|++++.+..+|++....
T Consensus        31 ~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         31 PSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            4455577899999999999999998665 5556699999999999999999999999999999999988754

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.48  E-value=0.0018  Score=54.51  Aligned_cols=72  Identities=17%  Similarity=0.176  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHH-hhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl-~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      .....-++|.+...+...+++.+|.++..-+ .....+.+++.+++++||+++..|++++.+.++|++.+...
T Consensus        32 ~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         32 PSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3445567889999999999999999776555 56899999999999999999999999999999999998654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.44  E-value=0.0018  Score=54.45  Aligned_cols=70  Identities=11%  Similarity=0.043  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHH-HHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATV-KMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  198 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~-~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~  198 (413)
                      ...+..++|.+...+.-.+++++|.++. .+-.....+.+++.+++++||+++..||+++.+.++|++...
T Consensus        37 ~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         37 YGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4556677899999999999999998654 666679999999999999999999999999999999998764

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.44  E-value=0.0036  Score=61.76  Aligned_cols=142  Identities=19%  Similarity=0.301  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHH--HhhcCccccccccccchhcccchHH
Q 015117           40 NVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLL--QARHKKVGEKSLLSFSTIAQMPVIS  117 (413)
Q Consensus        40 ~vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~  117 (413)
                      +++++..+.+..+.+....+....  +|.-++...++.+.++.+.+.......  ...-.        +...+       
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~--~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~--------~~~~f-------  217 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFK--KYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFR--------SAIRF-------  217 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH--HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhh--------HHHHH-------
Confidence            444555555555555555432221  123445788899999999888776655  22111        00011       


Q ss_pred             HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015117          118 FILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  197 (413)
Q Consensus       118 ~~~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv  197 (413)
                        ..+.+.......+-++.-++.....|.-.+..++.+..++..++-+.+.+++.++.++++++.||.|+++.+.|..+-
T Consensus       218 --~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~  295 (303)
T PF08449_consen  218 --ISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY  295 (303)
T ss_pred             --HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence              012222223444555555555566677789999999999999999999999999999999999999999999999886


Q ss_pred             hcC
Q 015117          198 QLR  200 (413)
Q Consensus       198 ~~~  200 (413)
                      ...
T Consensus       296 ~~~  298 (303)
T PF08449_consen  296 SYA  298 (303)
T ss_pred             HHh
Confidence            543

; GO: 0055085 transmembrane transport

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.41  E-value=0.0049  Score=60.41  Aligned_cols=64  Identities=19%  Similarity=0.202  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          137 YAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       137 y~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      -.+...+.+.+++++++++..++..+.|+++++++++++||+++..||++.++.+.|+.+.+..
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            3467788999999999999999999999999999999999999999999999999999887653

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.40  E-value=0.0012  Score=57.23  Aligned_cols=67  Identities=16%  Similarity=0.167  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHH--HhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          134 AFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKI--IMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       134 Ally~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~l--lL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      -++|.+...+...+++.+|++...-+....+..+++.++.  ++||+++..||+++++.++|+.++..+
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            3468899999999999999999998888887888888885  899999999999999999999998754

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.38  E-value=0.0031  Score=61.98  Aligned_cols=72  Identities=19%  Similarity=0.289  Sum_probs=64.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHh-hcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHH----HHHHHHHHHHHHhhc
Q 015117          128 VLLAVPAFLYAINNYLKFIMQL-YFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQW----EALALLLIGISVNQL  199 (413)
Q Consensus       128 ~~~~vpAlly~~~n~L~f~al~-~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw----~al~Ll~~GV~lv~~  199 (413)
                      +...+.+++..+++.+++.+.+ ++++++..++.+..|+..++++++++||+.+++|+    ++.++...|+.++..
T Consensus       212 ~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       212 LLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            3455577788899999999999 99999999999999999999999999999999999    999999999888643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.38  E-value=0.0069  Score=59.58  Aligned_cols=63  Identities=16%  Similarity=0.143  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          138 AINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       138 ~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      .+...+.+.+++++++.+..++..+.|++.+++++++++|+++..||++.++.++|+.+...+
T Consensus       226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            356667888999999999999999999999999999999999999999999999999887654

>TIGR00688 rarD rarD protein

Probab=97.24  E-value=0.011  Score=56.56  Aligned_cols=133  Identities=8%  Similarity=0.016  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhH-HHHHH---
Q 015117          217 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKA-TMLLI---  292 (413)
Q Consensus       217 G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~-~~~~i---  292 (413)
                      |.++++++++++|..++..+. ..+   .++.....+=.+++.++.++.+...  .+.......+...+.. .+..+   
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~-~~~---~~~~~i~~~R~~~a~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   76 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKL-LKP---LPATDILGHRMIWSFPFMLLSVTLF--RQWAALIERLKRIQKRPLILSLLLC   76 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHH-hcc---CCHHHHHHHHHHHHHHHHHHHHHHH--cchHHHHHHHhCcccchHHHHHHHH
Confidence            678889999999999999987 332   3444333333444444333222111  0100000001111111 11111   


Q ss_pred             -HHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          293 -CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       293 -l~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                       +..++...+....++|.+........+..|++++++++++++|+++...++|..+.++|+.+-
T Consensus        77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence             122334445556678877777777888999999999999999999999999999999997644

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.19  E-value=0.013  Score=57.67  Aligned_cols=133  Identities=9%  Similarity=0.025  Sum_probs=85.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc--ccccCChhHHH--HH
Q 015117          216 GAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSF--DILQGHSKATM--LL  291 (413)
Q Consensus       216 ~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~--~~~~g~~~~~~--~~  291 (413)
                      .|.++++++++++|..+++.+.. .+   .++.....+-..++.++.++.+..    +++...  ..+..+....+  ..
T Consensus         8 ~g~~~~l~a~~~wg~~~~~~k~~-~~---~~~~~~~~~R~~~a~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~   79 (296)
T PRK15430          8 QGVLLALAAYFIWGIAPAYFKLI-YY---VPADEILTHRVIWSFFFMVVLMSI----CRQWSYLKTLIQTPQKIFMLAVS   79 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHh-cC---CCHHHHHHHHHHHHHHHHHHHHHH----HccHHHHHHHHcCHHHHHHHHHH
Confidence            47888999999999999999654 32   344433334344454433333221    111000  00111111111  11


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhc
Q 015117          292 ICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  356 (413)
Q Consensus       292 il~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~  356 (413)
                      .+..++...+..+.+++.+....+...+..|+++.++++++++|+++..+++|+++.+.|+.+..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            23334445566667788888888888889999999999999999999999999999999987654

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.07  E-value=0.0051  Score=51.85  Aligned_cols=61  Identities=8%  Similarity=0.086  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhc
Q 015117          296 AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  356 (413)
Q Consensus       296 aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~  356 (413)
                      ++...+...++|+.+--..-...+++++++.++|+++|||++|..+++|+++++.|+.+-.
T Consensus        48 ~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         48 GLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3344555667777664444444558899999999999999999999999999999987543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.06  E-value=0.0081  Score=51.40  Aligned_cols=62  Identities=21%  Similarity=0.239  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHhhh-hhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          296 AAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       296 aiggl~vs~v~Ky~~-~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      ++.-.+.+.++|+.+ ++.-...+.+.++.+.++++++|||++|+..++|+.+++.|+..-+.
T Consensus        41 ~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         41 SLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            444455667777654 33334445678899999999999999999999999999999877654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.00  E-value=0.011  Score=49.58  Aligned_cols=60  Identities=23%  Similarity=0.248  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          297 AQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       297 iggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      .......+..++.+. .......+.++++.++++++|+|+++...++|++++++|+.+-..
T Consensus        47 ~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   47 VAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAW  106 (113)
T ss_pred             HHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence            444555677788875 555677789999999999999999999999999999999876654

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.91  E-value=0.013  Score=49.36  Aligned_cols=60  Identities=20%  Similarity=0.219  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHhhh-hhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          298 QGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       298 ggl~vs~v~Ky~~-~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      .-.+.+.++|+.+ ++.-...+.++++.+.++++++|||++|+..++|+++++.|+..-+.
T Consensus        43 sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3345566666654 23333334468899999999999999999999999999999987754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.77  E-value=0.023  Score=55.21  Aligned_cols=116  Identities=18%  Similarity=0.159  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHH
Q 015117           42 ALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILL  121 (413)
Q Consensus        42 l~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (413)
                      +.+..+.+.|..+..+.++...      ++.+ .++-|.+.++++..++....+      ++..                
T Consensus       141 ~~Ll~stigy~~Y~~~~~~~~~------~~~~-~~lPqaiGm~i~a~i~~~~~~------~~~~----------------  191 (269)
T PF06800_consen  141 LALLISTIGYWIYSVIPKAFHV------SGWS-AFLPQAIGMLIGAFIFNLFSK------KPFF----------------  191 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC------ChhH-hHHHHHHHHHHHHHHHhhccc------cccc----------------
Confidence            3344456667666666665433      3333 466788888887766543221      1111                


Q ss_pred             HhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHH
Q 015117          122 QAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALA  188 (413)
Q Consensus       122 ~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~  188 (413)
                        .|..++=.++++++.+.|.+++++.+..-.++.-.+.|+.++..++.+.++|||+=+++++....
T Consensus       192 --~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~  256 (269)
T PF06800_consen  192 --EKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL  256 (269)
T ss_pred             --ccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence              12234567899999999999999999999999999999999999999999999999999886544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.75  E-value=0.0033  Score=53.14  Aligned_cols=71  Identities=20%  Similarity=0.247  Sum_probs=64.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHH-hhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015117          127 NVLLAVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  197 (413)
Q Consensus       127 ~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl-~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv  197 (413)
                      +++|.+|=++|.....++|+.+...|.+...-+ +.+.-++|++.++++.+|..+++.|+++.+.++|+.+.
T Consensus        41 n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   41 NPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            458999999999999999999999998877655 68999999999999989999999999999999998753

Many members are annotated as potential transmembrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.63  E-value=0.012  Score=57.89  Aligned_cols=67  Identities=15%  Similarity=0.289  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015117          135 FLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  201 (413)
Q Consensus       135 lly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~  201 (413)
                      +.+.+.+.+.|.|+.+-|++...=+..+.++..|+++..+||||++....++.++.++|-.++....
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence            4577899999999999999999999999999999999999999999999999999999976655443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.47  E-value=0.011  Score=48.05  Aligned_cols=61  Identities=11%  Similarity=0.252  Sum_probs=37.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChHHH-HHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 015117          130 LAVPAFLYAINNYLKFIMQLYFNPATV-KMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL  190 (413)
Q Consensus       130 ~~vpAlly~~~n~L~f~al~~l~~~t~-~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll  190 (413)
                      ....-.+|.+...+.-.+++++|.++. .+.....++.+++.+.+++||+++..||.++.+.
T Consensus        32 ~~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   32 TILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             --HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            334445899999999999999998776 5556799999999999999999999999999863

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.47  E-value=1.2  Score=45.05  Aligned_cols=104  Identities=12%  Similarity=0.025  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHH-HhhhhHHHHHHHHHHHhcCCC---C----HHHHHHHHHHHHHHHHhhc-
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKM-LSNLKVFVIALLLKIIMKRRF---S----IIQWEALALLLIGISVNQL-  199 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~v-l~q~k~l~tAlls~llL~~kl---s----~~qw~al~Ll~~GV~lv~~-  199 (413)
                      .-.+-+++..+.|..++.+.+++..+...- -..+..+..+++..++++|=-   +    ..-..++++..+|+++... 
T Consensus        75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            444567788899999999999998766644 446888899999999988532   3    3455677888889998876 


Q ss_pred             ---CCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 015117          200 ---RSLPEGTSALGLPVATGAYLYTLIFVTVPSLAS  232 (413)
Q Consensus       200 ---~~~~~~~~~~~~~~~~~G~ll~L~a~~~sg~a~  232 (413)
                         ++..++++..+.....-|+.+.+++.+.+++.+
T Consensus       155 g~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        155 GQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             hhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence               332211100011112247777777777777766

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.41  E-value=0.0059  Score=60.72  Aligned_cols=70  Identities=14%  Similarity=0.219  Sum_probs=64.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  198 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~  198 (413)
                      .+..-++++..+|...|..+.+++|-|+++....|-..+-..+++++++++++.|.++.++.++|+.+-.
T Consensus       237 ~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  237 ILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            4444559999999999999999999999999999999999999999999999999999999999998864

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.29  E-value=0.013  Score=55.98  Aligned_cols=58  Identities=22%  Similarity=0.263  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 015117          139 INNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISV  196 (413)
Q Consensus       139 ~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~l  196 (413)
                      +-..|-.++++.+|..+|.++.++.|.+-|+..+++|+|++|..||+++.+..++.+=
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence            4556778899999999999999999999999999999999999999999998887653

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.25  E-value=0.23  Score=41.81  Aligned_cols=60  Identities=20%  Similarity=0.087  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHhhh-hhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          296 AAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       296 aiggl~vs~v~Ky~~-~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                      ++.-.+.+.++|+.+ ++.-...+...++.+.+.++++|||++|+..++|+++++.|+..-
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            344456667777654 344444556788999999999999999999999999999998764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.15  E-value=0.042  Score=54.44  Aligned_cols=115  Identities=12%  Similarity=0.076  Sum_probs=78.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHHH
Q 015117          215 TGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICN  294 (413)
Q Consensus       215 ~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~~~il~  294 (413)
                      .+|.++.++++++.+.+..++||-.++.++.+.... -.    +     .              +.+.  ++..|.-++.
T Consensus         6 ~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-~~----~-----~--------------~~l~--~~~W~~G~~~   59 (300)
T PF05653_consen    6 YIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-SG----G-----R--------------SYLR--RPLWWIGLLL   59 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-ch----h-----h--------------HHHh--hHHHHHHHHH
Confidence            468899999999999999999987765422111100 00    0     0              0011  1122222333


Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHh
Q 015117          295 NAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  355 (413)
Q Consensus       295 ~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly  355 (413)
                      .++|.+.-...+.+++..+..+..+++++++++++.++++|+++...++|.++++.|..+-
T Consensus        60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li  120 (300)
T PF05653_consen   60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI  120 (300)
T ss_pred             HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence            3455554445566788888888888999999999999999999999999999999997543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.07  E-value=0.066  Score=44.65  Aligned_cols=59  Identities=19%  Similarity=0.246  Sum_probs=46.4

Q ss_pred             HHHHHHHHHhhh-hhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          299 GILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       299 gl~vs~v~Ky~~-~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      -.+.+..+|+.+ ++.-...+...++.+++.++++|||+++...++|+.+++.|+..-+.
T Consensus        44 f~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          44 FYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            345666777754 34444556678899999999999999999999999999999876543

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.00  E-value=0.081  Score=44.18  Aligned_cols=61  Identities=8%  Similarity=0.117  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHhhh-hhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhc
Q 015117          296 AAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  356 (413)
Q Consensus       296 aiggl~vs~v~Ky~~-~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~  356 (413)
                      ++.-.+.+.++|..+ ++.-...+.+.++.+.++++++|||++|+..++|+.+++.|+..-+
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            333445566666644 4444455567889999999999999999999999999999987654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.83  E-value=0.37  Score=48.48  Aligned_cols=62  Identities=13%  Similarity=0.173  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcc
Q 015117          296 AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       296 aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      ..+..++...++|.+-.......+.+++++.++|+++++++.++.+++|+++.++|+.+-..
T Consensus        90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~  151 (334)
T PF06027_consen   90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVV  151 (334)
T ss_pred             HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheee
Confidence            34566667778888766667778889999999999999999999999999999999876544

Some of the sequences in this family are annotated as putative membrane proteins.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=95.74  E-value=0.081  Score=50.48  Aligned_cols=71  Identities=23%  Similarity=0.272  Sum_probs=61.7

Q ss_pred             HHHHHHHHH-HHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          130 LAVPAFLYA-INNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       130 ~~vpAlly~-~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      ....+++-. +...+.+.+++..++.....+..+.|++..++++++++|+.+..||++.++.+.|+.+...+
T Consensus       217 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            334444433 57888999999999999999999999999999999999999999999999999999988654

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.47  E-value=0.18  Score=48.67  Aligned_cols=68  Identities=21%  Similarity=0.105  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHhhh-hhHHHHHhHHHHHHHHHHHHH-HhCCCC-----cHHHHHHHHHHHHHHHHhcccCCcCC
Q 015117          296 AAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAA-LFGHTL-----TMNFILGISIVFISMHQFFSPLSKVK  363 (413)
Q Consensus       296 aiggl~vs~v~Ky~~-~i~k~~a~s~~iv~t~lls~~-lfg~~l-----t~~~~lG~~LVi~gv~ly~~~~~~~~  363 (413)
                      +.|+++.-.++|..+ ++--....+...+.....|-+ +||.+.     .+.-.+|++++++|..+|...+.+.+
T Consensus        66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~  140 (254)
T PF07857_consen   66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEK  140 (254)
T ss_pred             hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCC
Confidence            555555555555443 222223344455555555543 676542     34668999999999998877555553

The region concerned is approximately 280 residues long.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.30  E-value=0.14  Score=49.28  Aligned_cols=70  Identities=21%  Similarity=0.174  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcccCCcCCCC
Q 015117          296 AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDE  365 (413)
Q Consensus       296 aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~~~~~~~~  365 (413)
                      ++.+.+....+++.|+.+-....-..+++|+++++++++.+++..+|++..+.+.|+.+.........+.
T Consensus        28 ~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~   97 (244)
T PF04142_consen   28 AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDN   97 (244)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccc
Confidence            5566777788899998887777778999999999999999999999999999999998877655554333

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=94.96  E-value=0.032  Score=52.32  Aligned_cols=68  Identities=10%  Similarity=0.087  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISV  196 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~l  196 (413)
                      ....+.++.+++..+....+++.|+.+..+...+.++++++++.++++++++..||++..+.+.|+.+
T Consensus       154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            34556677788888999999999999999999999999999999999999999999999999988643

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.81  E-value=1.9  Score=37.63  Aligned_cols=130  Identities=18%  Similarity=0.144  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHHHHHHH
Q 015117          219 LYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQ  298 (413)
Q Consensus       219 ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~~~il~~aig  298 (413)
                      ++.+++..+.++.+..+-++-|.-  .+++.-.+.-+..|.+...+..+.   .+++ ....+.+.+||.|.-=+..++.
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~~--gs~~~as~i~~~~G~i~~~i~~~~---~~~~-~~~~~~~~p~w~~lGG~lG~~~   77 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKAL--GSPLVASFISFGVGFILLLIILLI---TGRP-SLASLSSVPWWAYLGGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHHHHHHHH---hccc-ccchhccCChHHhccHHHHHHH
Confidence            445555666778888888887753  346665666556666655544332   2222 2122444566666433333333


Q ss_pred             HHHHHHHHHhhhhhH-HHHHhHHHHHHHHHHHHH-Hh---CCCCcHHHHHHHHHHHHHHHH
Q 015117          299 GILSSFFFKYADTIL-KKYSSTVATIFTGLASAA-LF---GHTLTMNFILGISIVFISMHQ  354 (413)
Q Consensus       299 gl~vs~v~Ky~~~i~-k~~a~s~~iv~t~lls~~-lf---g~~lt~~~~lG~~LVi~gv~l  354 (413)
                      -....+.+...+... ......-+++.+.++..+ +|   .++++...++|.++++.|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            233334444443222 222223345556666665 34   368999999999999999864

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=94.54  E-value=0.1  Score=44.08  Aligned_cols=66  Identities=17%  Similarity=0.266  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhh-hhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Q 015117          289 MLLICNNAAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ  354 (413)
Q Consensus       289 ~~~il~~aiggl~vs~v~Ky~~-~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~l  354 (413)
                      +...+.+-.|.+...+.+..+| ++....+++++.++|++.++++.++..+...++|+++|+.|+.+
T Consensus        45 ~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   45 IIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            3444455556666666666666 44444566899999999999998888999999999999999865

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.50  E-value=0.17  Score=41.09  Aligned_cols=49  Identities=18%  Similarity=0.291  Sum_probs=26.4

Q ss_pred             HHHHHHHHhhh-hhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Q 015117          300 ILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIV  348 (413)
Q Consensus       300 l~vs~v~Ky~~-~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LV  348 (413)
                      .+.+.++|+.+ ++.-...+.++++.+.++|+++|||++|..+++|+.+|
T Consensus        44 ~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   44 YFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            45566667654 22323345578899999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=94.05  E-value=0.79  Score=46.28  Aligned_cols=136  Identities=13%  Similarity=0.080  Sum_probs=79.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHH--
Q 015117          215 TGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLI--  292 (413)
Q Consensus       215 ~~G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~~~i--  292 (413)
                      ..|++..+++++|+|--.+-++| .|+-    .|. ++|. ..+++..++..+.-....-+.-.+.++..+...+..-  
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w----~wE-~~W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKKW----SWE-TMWS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCCC----chh-HHHH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            35888889999998877777766 4532    122 2344 3333222211111011111111122333444333222  


Q ss_pred             --HHHHHHHHHHHHHHHhhh-hhHHHHHhHHHHHHHHHHHHHHhCCCC---c----HHHHHHHHHHHHHHHHhcc
Q 015117          293 --CNNAAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTL---T----MNFILGISIVFISMHQFFS  357 (413)
Q Consensus       293 --l~~aiggl~vs~v~Ky~~-~i~k~~a~s~~iv~t~lls~~lfg~~l---t----~~~~lG~~LVi~gv~ly~~  357 (413)
                        +.-++|++.....+|+.+ +..-..++.++.+++.+++.+++||-.   +    ...++|.+++++|+.+...
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence              244778888888999876 444445566788999999999998643   2    3568899999999887655

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.88  E-value=0.14  Score=48.64  Aligned_cols=71  Identities=17%  Similarity=0.296  Sum_probs=63.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015117          127 NVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  197 (413)
Q Consensus       127 ~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv  197 (413)
                      .|-+...|+.-++...+.|....+..|-+-++...++-++|.+.++++++..++.+||++-.+.+.|...=
T Consensus       241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            34566777778888999999999999999999999999999999999999999999999999999987653

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.64  E-value=0.79  Score=45.14  Aligned_cols=148  Identities=16%  Similarity=0.167  Sum_probs=100.0

Q ss_pred             cccCCcccchhhHHHHHHHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 015117           25 YDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSL  104 (413)
Q Consensus        25 ~~~~~~~~~~k~~~l~vl~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~  104 (413)
                      +..+|.+-++. ..+.+.-+.-+.+....|.-+.+      +|.-++...++-.++.-.+.+..-++-++..     ++.
T Consensus       163 ~~~g~~ns~~G-~~Ll~~~L~fDgfTn~tQd~lf~------~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~-----~~a  230 (327)
T KOG1581|consen  163 SKSGRENSPIG-ILLLFGYLLFDGFTNATQDSLFK------KYKVSSLHMMFGVNLFSAILNGTYLILQGHL-----LPA  230 (327)
T ss_pred             cccCCCCchHh-HHHHHHHHHHHhhHHhHHHHHhc------cCCccHhHHHHHHHHHHHHHHHHhhhcCCCC-----chH
Confidence            44444444443 34444455555556667766655      3345566777888888888777765433321     111


Q ss_pred             cccchhc-ccchHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHH
Q 015117          105 LSFSTIA-QMPVISFILLQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQ  183 (413)
Q Consensus       105 ~~~~~~~-~~~~~~~~~~~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~q  183 (413)
                      .   .|- +-       .+.++|   +.+-+.+-++..+..|+-++...+-++.++.-++=+++.+++.++.+++++..|
T Consensus       231 v---~F~~~h-------p~~~~D---i~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q  297 (327)
T KOG1581|consen  231 V---SFIKEH-------PDVAFD---ILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ  297 (327)
T ss_pred             H---HHHHcC-------hhHHHH---HHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh
Confidence            1   110 00       122333   455566667788888999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 015117          184 WEALALLLIGISVN  197 (413)
Q Consensus       184 w~al~Ll~~GV~lv  197 (413)
                      |.++.+.+.|+..=
T Consensus       298 ~~g~~iVFg~i~l~  311 (327)
T KOG1581|consen  298 WLGVLIVFGGIFLE  311 (327)
T ss_pred             ccCeeeehHHHHHH
Confidence            99999999988663

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=92.75  E-value=3.4  Score=40.55  Aligned_cols=71  Identities=17%  Similarity=0.229  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL  199 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~  199 (413)
                      .+..-+..-++--.++-.|-+.+|.++.-++....|...-+++.++++|+++.-|+.+-+..-+|+++...
T Consensus       213 LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         213 LLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             HHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            33334444455556666788889999999999999999999999999999999999999999999988754

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=91.47  E-value=0.038  Score=52.63  Aligned_cols=130  Identities=15%  Similarity=0.207  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHhhhhhhheecccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccchhcccchHHHHHH
Q 015117           42 ALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQMPVISFILL  121 (413)
Q Consensus        42 l~v~~~~~~~~~~~il~~~s~~~g~~~y~~~tvV~l~E~~Kl~is~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (413)
                      +.-..-++.||+.|...  .|.+|+ +|...   .=+-+-.+++++.+++...+        ...               
T Consensus         5 liaL~P~l~WGsip~v~--~k~GG~-p~qQ~---lGtT~GALifaiiv~~~~~p--------~~T---------------   55 (288)
T COG4975           5 LIALLPALGWGSIPLVA--NKFGGK-PYQQT---LGTTLGALIFAIIVFLFVSP--------ELT---------------   55 (288)
T ss_pred             HHHHHHHHHhcccceee--eecCCC-hhHhh---hhccHHHHHHHHHHheeecC--------ccc---------------
Confidence            34445567788887654  355555 34432   33444556677766654211        111               


Q ss_pred             HhhhhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHh-hhhHHHHHHHHHHHhcCCCCHHHH----HHHHHHHHHHHH
Q 015117          122 QAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLS-NLKVFVIALLLKIIMKRRFSIIQW----EALALLLIGISV  196 (413)
Q Consensus       122 ~~~r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~-q~k~l~tAlls~llL~~kls~~qw----~al~Ll~~GV~l  196 (413)
                        ++....-.+-+++..+....+|-+.+++..+...=++ .+..+-+.+++++.++|--+..|.    .|++++.+|+.+
T Consensus        56 --~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~l  133 (288)
T COG4975          56 --LTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYL  133 (288)
T ss_pred             --hhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheE
Confidence              1122344566777888899999999998776665443 577889999999999999998875    578888889888


Q ss_pred             hhcCCC
Q 015117          197 NQLRSL  202 (413)
Q Consensus       197 v~~~~~  202 (413)
                      ...++.
T Consensus       134 Ts~~~~  139 (288)
T COG4975         134 TSKQDR  139 (288)
T ss_pred             eeeecc
Confidence            766553

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.62  E-value=12  Score=33.32  Aligned_cols=133  Identities=14%  Similarity=0.126  Sum_probs=68.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHHHHH
Q 015117          217 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNA  296 (413)
Q Consensus       217 G~ll~L~a~~~sg~a~Vy~EkllK~~~~~s~~~~n~~l~~~g~l~~l~~ll~~~~~~~~~~~~~~~g~~~~~~~~il~~a  296 (413)
                      .++..+++..+..+.+..+-++.|.- + ++..-...-+.-|++......+   ..++..........+||.|.-=   .
T Consensus         6 ~ll~~i~aG~~l~~Q~~iN~qL~~~~-~-spl~As~isf~vGt~~L~~l~l---~~~~~~~~a~~~~~pwW~~~GG---~   77 (150)
T COG3238           6 YLLFAILAGALLPLQAAINGRLARYL-G-SPLLASLISFLVGTVLLLILLL---IKQGHPGLAAVASAPWWAWIGG---L   77 (150)
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHc-C-ChHHHHHHHHHHHHHHHHHHHH---HhcCCCchhhccCCchHHHHcc---c
Confidence            34555666667778888888887754 2 3433223323334433332222   1333322223344566666432   2


Q ss_pred             HHHHHHHHHH----HhhhhhHHHHHhHHHHHHHHHHHHH-HhC---CCCcHHHHHHHHHHHHHHHHhcc
Q 015117          297 AQGILSSFFF----KYADTILKKYSSTVATIFTGLASAA-LFG---HTLTMNFILGISIVFISMHQFFS  357 (413)
Q Consensus       297 iggl~vs~v~----Ky~~~i~k~~a~s~~iv~t~lls~~-lfg---~~lt~~~~lG~~LVi~gv~ly~~  357 (413)
                      +|.+++.--+    |.....+.....+-+++.+.++.-+ +||   .+++...++|++++++|+++...
T Consensus        78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          78 LGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            2333332222    2222223333334455556665544 333   57999999999999999776554

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=89.84  E-value=0.33  Score=46.97  Aligned_cols=73  Identities=18%  Similarity=0.183  Sum_probs=51.7

Q ss_pred             HHHHHHh---hhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcccCCcCCCCC---CCccccccC
Q 015117          302 SSFFFKY---ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEP---KNISLESVD  375 (413)
Q Consensus       302 vs~v~Ky---~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~~~~~~~~~---~~~~~~~~~  375 (413)
                      +.+.++|   +|+.+   .+..+++++++++|++++|+.|..-.+|..+-+.|+.+-.+|+--=.+..   +..++|.++
T Consensus       114 myya~~~mslaDA~v---ItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~  190 (346)
T KOG4510|consen  114 MYYALMYMSLADAVV---ITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI  190 (346)
T ss_pred             HHHHHhhcchhheEE---EEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence            3344444   55554   44467999999999999999999999999999999988777654333321   233355555


Q ss_pred             CC
Q 015117          376 SP  377 (413)
Q Consensus       376 ~~  377 (413)
                      ++
T Consensus       191 ~g  192 (346)
T KOG4510|consen  191 PG  192 (346)
T ss_pred             Cc
Confidence            55

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=88.18  E-value=0.2  Score=49.53  Aligned_cols=69  Identities=12%  Similarity=0.103  Sum_probs=60.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Q 015117          286 KATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ  354 (413)
Q Consensus       286 ~~~~~~il~~aiggl~vs~v~Ky~~~i~k~~a~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~l  354 (413)
                      +..|.-++..++|-+.-...+-+++.++.+...+++++.+++++.++++|.+++.-.+|.++.++|...
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~  133 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTT  133 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEE
Confidence            555666778888888777778889999999999999999999999999999999999999999998643

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=81.11  E-value=6.4  Score=37.36  Aligned_cols=69  Identities=12%  Similarity=0.077  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015117          129 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  197 (413)
Q Consensus       129 ~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv  197 (413)
                      .+.+.+++-+.-.++.=+.++-++.+++++...+.=+..|+-..++++++.+.....+++++++..++-
T Consensus       226 am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY  294 (309)
T COG5070         226 AMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY  294 (309)
T ss_pred             HHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence            566777777777777777788899999999999999999999999999999999999999998865553

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=80.97  E-value=0.84  Score=43.75  Aligned_cols=65  Identities=17%  Similarity=0.206  Sum_probs=58.9

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHhhhhHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 015117          125 RNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALAL  189 (413)
Q Consensus       125 r~~~~~~vpAlly~~~n~L~f~al~~l~~~t~~vl~q~k~l~tAlls~llL~~kls~~qw~al~L  189 (413)
                      |..++-.+|++..++.|..++++.+....+|.--++|+.++...+=..++||||=+++||..+..
T Consensus       207 K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~i  271 (288)
T COG4975         207 KYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVII  271 (288)
T ss_pred             HHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhh
Confidence            44667899999999999999999999999999999999999999999999999999999876543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	413
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.26
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.17
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.99
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.58

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.26  E-value=1e-06  Score=75.87  Aligned_cols=85  Identities=16%  Similarity=0.103  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHH-hHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhcccCCcCCCCCCCccc
Q 015117          293 CNNAAQGILSSFFFKYADTILKKYS-STVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISL  371 (413)
Q Consensus       293 l~~aiggl~vs~v~Ky~~~i~k~~a-~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~~~~~~~~~~~~~~  371 (413)
                      +..++.-.+....+|+.+....... ..+.++++.++++++|||++|+.+++|+++|+.|+++.+......+ .++...+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~~~~-~~~~~~v  116 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTP-HEFEAYV  116 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-------------
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCCCC-CCcccch
Confidence            3344455566677888775544444 7899999999999999999999999999999999998876432222 2355667


Q ss_pred             cccCCCc
Q 015117          372 ESVDSPK  378 (413)
Q Consensus       372 ~~~~~~~  378 (413)
                      |++|..|
T Consensus       117 ~~~~~~~  123 (137)
T 2i68_A          117 EQKLISE  123 (137)
T ss_dssp             -------
T ss_pred             hhhhcCH
Confidence            7766654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.17  E-value=1.4e-05  Score=66.11  Aligned_cols=71  Identities=15%  Similarity=0.188  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcChHHHHHH-hhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015117          130 LAVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  200 (413)
Q Consensus       130 ~~vpAlly~~~n~L~f~al~~l~~~t~~vl-~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~  200 (413)
                      ...-.++|.+...+...+++++|.+....+ ..+.|+.+++++++++||++++.||+++.+..+|+.++...
T Consensus        33 ~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344556788999999999999999998777 89999999999999999999999999999999999998654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.99  E-value=8.2e-06  Score=70.24  Aligned_cols=71  Identities=17%  Similarity=0.208  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcChHHHHHH-hhhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015117          131 AVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  201 (413)
Q Consensus       131 ~vpAlly~~~n~L~f~al~~l~~~t~~vl-~q~k~l~tAlls~llL~~kls~~qw~al~Ll~~GV~lv~~~~  201 (413)
                      .+-.++|.+...+.+.+++++|++....+ ..+.|+++++++++++||++++.||+++++.++|+.++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34456788999999999999999977777 899999999999999999999999999999999999987543

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.58  E-value=0.00048  Score=56.76  Aligned_cols=63  Identities=21%  Similarity=0.205  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHhhhhhHHHHH-hHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHhccc
Q 015117          296 AAQGILSSFFFKYADTILKKYS-STVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP  358 (413)
Q Consensus       296 aiggl~vs~v~Ky~~~i~k~~a-~s~~iv~t~lls~~lfg~~lt~~~~lG~~LVi~gv~ly~~~  358 (413)
                      ++.-.+....+|+.+.-..... ..++++++.++++++|||++|..+++|+++++.|+++.+..
T Consensus        41 ~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3344556677888775544333 67899999999999999999999999999999999887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00