Citrus Sinensis ID: 015133


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410--
MMDREDGGGGGGGGPTATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGPKVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMAEMYLTEKLNASKEEVSDEDDDRSENNSQNFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKKIMLST
cccccccccccccccccccccccccccEEEEEEccccccEEEEEcHHHHHHHHccccccccccccccccccEEcccccEEEEEEcccEEEEEcccEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
ccccccccccccccccccccccccccEEEEEEEEccccEEEEEccHHHHHHHHcccHHHHHHHccccccccEEEEcccEEEEEHHHHHHEEcccEEEEEcccccHHHHHHHHHHHHccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
mmdredggggggggptatprprkgmglRTWLVVSESGQSRVEEVGKHVImrrtglpardlrvldpllsypssilGRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQAlstqqagerdemeredkaeanlsgpsqhtlrrrasissnerkddapetsvvagpKVLAFEFRALESCLESACRCLDsetrtleeeayPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMAEMYLTEKLnaskeevsdedddrsennsqnftsfkPNVEELEMLLEAYFAQIDGILQKLSdmseyvddtEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNihitlfdaptikfwqttcgtigGCLALYLIAVGWGKKKIMLST
mmdredggggggggptatprprkgmGLRTWLVVsesgqsrveevgkhvimrrtglpardlrvldpLLSYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLqalstqqagerDEMEREDKaeanlsgpsqhtlrrrasissnerkddapetsvvagpKVLAFEFRALESCLESACRCLDSETRTleeeaypaldelttkistlnlervrQIKSrlvaingrvqkvRDEIEHLLDDDNDMAEMYLTEKLnaskeevsdedddrsennsqnftsfKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVgwgkkkimlst
MMDREDggggggggPTATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGPKVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMAEMYLTEKLNAskeevsdedddrsennsqnFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKKIMLST
**************************LRTWLVVS******VEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRI*******************************************************VAGPKVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLL*******************************************VEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKKI****
****************************TWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISS********************************************************PKVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMAEMYLTEKLNASKEEV***************TSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKKIMLS*
***************TATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQ**************************************************VVAGPKVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMAEMYLTEKLNA****************SQNFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKKIMLST
************************MGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSL*******************************************************PKVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMAEMYLTEKLN*************************PNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKKIMLS*
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MMDREDGGGGGGGGPTATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGPKVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMAEMYLTEKLNASKEEVSDEDDDRSENNSQNFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKKIMLST
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query412 2.2.26 [Sep-21-2011]
Q8L4S2444 Magnesium transporter MRS yes no 0.905 0.840 0.579 1e-129
A2WY50444 Magnesium transporter MRS N/A no 0.905 0.840 0.579 1e-129
Q9LJN2484 Magnesium transporter MRS yes no 0.912 0.776 0.513 1e-106
Q8S1N1418 Magnesium transporter MRS no no 0.890 0.877 0.467 9e-91
A2WXD3418 Magnesium transporter MRS N/A no 0.890 0.877 0.467 9e-91
Q9S9N4442 Magnesium transporter MRS no no 0.895 0.834 0.434 1e-86
Q9SAH0443 Magnesium transporter MRS no no 0.893 0.830 0.435 2e-86
Q01JR9434 Putative magnesium transp N/A no 0.866 0.822 0.462 9e-85
Q7XQQ1434 Putative magnesium transp no no 0.837 0.794 0.473 2e-84
Q67UQ7436 Magnesium transporter MRS no no 0.810 0.766 0.408 2e-74
>sp|Q8L4S2|MRS2F_ORYSJ Magnesium transporter MRS2-F OS=Oryza sativa subsp. japonica GN=MRS2-F PE=1 SV=1 Back     alignment and function desciption
 Score =  460 bits (1184), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/426 (57%), Positives = 295/426 (69%), Gaps = 53/426 (12%)

Query: 28  RTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHI 87
           R WLVV  SGQ+RVEE GKH +M RTGLPARDLRVLDPLLSYPS+ILGRERAIV+NLE +
Sbjct: 28  REWLVVPASGQARVEEAGKHAVMARTGLPARDLRVLDPLLSYPSTILGRERAIVVNLERV 87

Query: 88  KAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLSGP 147
           KA++TA EVL+  S +P    FV DLQ R+    A S+ QA E  +ME E  A   ++ P
Sbjct: 88  KAVITAAEVLLPNSKDPAFASFVCDLQARV---LASSSDQAAEFTDMEGESSA---VTSP 141

Query: 148 SQHTLRRRASISSNERKDDAPETSVVAG-----------------PKVLAFEFRALESCL 190
                    S + NE +     ++VV G                  KVL FEFRALE CL
Sbjct: 142 ----FPALTSTTPNELEMTNKNSNVVGGMTHSNSMPTLTAAKDGNTKVLPFEFRALEVCL 197

Query: 191 ESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEH 250
           ESACR L+ ET TLE+EAYPALDELT+KISTLNLERVRQIKSRLVAI+GRVQKVRDE+EH
Sbjct: 198 ESACRSLEEETSTLEQEAYPALDELTSKISTLNLERVRQIKSRLVAISGRVQKVRDELEH 257

Query: 251 LLDDDNDMAEMYLTEKL---------------NASKEEVSDEDDDRSENNSQN--FTSFK 293
           LLDD+ DMAEMYLTEKL               + S+ EV  ++D RSE +  N  F  +K
Sbjct: 258 LLDDEMDMAEMYLTEKLTRQEISETSSRVEVDDPSQLEVDRDEDYRSEADVSNGTFIGYK 317

Query: 294 PNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMGVLLSAAN 353
           P++EELEMLLEAYF QIDG L KLS + EYVDDTED INIMLDD QNQLLQMGV+LS A 
Sbjct: 318 PHIEELEMLLEAYFVQIDGTLNKLSHLREYVDDTEDYINIMLDDKQNQLLQMGVMLSTAT 377

Query: 354 MILNAGIVVVGLFGMNIHITLFDAPT---------IKFWQTTCGTIGGCLALYLIAVGWG 404
           +++ AG+ VVGLFGMNI I+L+  PT         +KFW+TT GTI GC  +Y++A+GWG
Sbjct: 378 VVITAGVAVVGLFGMNIGISLYADPTNEEEKRASNMKFWETTLGTIAGCTVMYIVAMGWG 437

Query: 405 KKKIML 410
           K+  +L
Sbjct: 438 KRSGLL 443




Magnesium transporter that may mediate the influx of magnesium.
Oryza sativa subsp. japonica (taxid: 39947)
>sp|A2WY50|MRS2F_ORYSI Magnesium transporter MRS2-F OS=Oryza sativa subsp. indica GN=MRS2-F PE=3 SV=1 Back     alignment and function description
>sp|Q9LJN2|MRS23_ARATH Magnesium transporter MRS2-3 OS=Arabidopsis thaliana GN=MRS2-3 PE=1 SV=1 Back     alignment and function description
>sp|Q8S1N1|MRS2E_ORYSJ Magnesium transporter MRS2-E OS=Oryza sativa subsp. japonica GN=MRS2-E PE=2 SV=1 Back     alignment and function description
>sp|A2WXD3|MRS2E_ORYSI Magnesium transporter MRS2-E OS=Oryza sativa subsp. indica GN=MRS2-E PE=3 SV=1 Back     alignment and function description
>sp|Q9S9N4|MRS21_ARATH Magnesium transporter MRS2-1 OS=Arabidopsis thaliana GN=MRS2-1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAH0|MRS2A_ARATH Magnesium transporter MRS2-10 OS=Arabidopsis thaliana GN=MRS2-10 PE=2 SV=1 Back     alignment and function description
>sp|Q01JR9|MRS2D_ORYSI Putative magnesium transporter MRS2-D OS=Oryza sativa subsp. indica GN=MRS2-D PE=3 SV=1 Back     alignment and function description
>sp|Q7XQQ1|MRS2D_ORYSJ Putative magnesium transporter MRS2-D OS=Oryza sativa subsp. japonica GN=MRS2-D PE=3 SV=1 Back     alignment and function description
>sp|Q67UQ7|MRS2B_ORYSJ Magnesium transporter MRS2-B OS=Oryza sativa subsp. japonica GN=MRS2-B PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query412
296082627443 unnamed protein product [Vitis vinifera] 0.934 0.869 0.674 1e-153
359480660401 PREDICTED: magnesium transporter MRS2-F- 0.868 0.892 0.667 1e-147
224096135386 magnesium transporter [Populus trichocar 0.893 0.953 0.672 1e-141
224096137405 magnesium transporter [Populus trichocar 0.929 0.945 0.639 1e-135
356547452405 PREDICTED: magnesium transporter MRS2-F- 0.946 0.962 0.587 1e-128
242059611443 hypothetical protein SORBIDRAFT_03g04327 0.922 0.857 0.587 1e-127
75272453444 RecName: Full=Magnesium transporter MRS2 0.905 0.840 0.579 1e-127
414879112443 TPA: hypothetical protein ZEAMMB73_73634 0.915 0.851 0.575 1e-126
326501706450 predicted protein [Hordeum vulgare subsp 0.919 0.842 0.579 1e-124
357126420450 PREDICTED: magnesium transporter MRS2-F- 0.912 0.835 0.570 1e-123
>gi|296082627|emb|CBI21632.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 288/427 (67%), Positives = 334/427 (78%), Gaps = 42/427 (9%)

Query: 22  RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIV 81
           RKG+G+R WLVV ESGQS +EE+GKH +MRRTGLPARDLRVLDP+LSYPS+ILGRERAIV
Sbjct: 23  RKGIGIRAWLVVLESGQSHLEELGKHSVMRRTGLPARDLRVLDPVLSYPSTILGRERAIV 82

Query: 82  INLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAE 141
           INLEHIKAI+TAKEVLM+ S NPL+VQFV+DLQHR+    A+      E  + E ED A+
Sbjct: 83  INLEHIKAIITAKEVLMVNSNNPLIVQFVEDLQHRVMPKPAM------ESHDKEIEDAAD 136

Query: 142 ANLSGPSQHTL-------RRRASISSN--------ERKDDAPETS----VVAGPKVLAFE 182
           AN   PS H         R+R S   N        + K+D+P+TS    V AGPKVL FE
Sbjct: 137 ANWGSPSVHGFNGSVTNSRKRPSQRVNVSSEVLNVDVKEDSPKTSEDERVAAGPKVLPFE 196

Query: 183 FRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQ 242
           FRALE+CLESACRCL+SET+TLE+EAYPALDELT+ ISTLNLERVRQIKSRLVAI+GRVQ
Sbjct: 197 FRALEACLESACRCLESETQTLEQEAYPALDELTSNISTLNLERVRQIKSRLVAISGRVQ 256

Query: 243 KVRDEIEHLLDDDNDMAEMYLTEKL-------NASKEEVSD----EDDDRSENNSQN--- 288
           KVRDE+EHLLDDDNDMAEM+LTEKL       ++ KEE+ +    EDD+R+E +      
Sbjct: 257 KVRDELEHLLDDDNDMAEMFLTEKLVRPSLDQSSIKEELCNDELEEDDERTEESKSESNS 316

Query: 289 --FTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMG 346
             F+ FKPNVEELEMLLEAYF Q+DGILQKLSDMSEYV DTED INIMLDD QNQLLQMG
Sbjct: 317 EIFSGFKPNVEELEMLLEAYFVQVDGILQKLSDMSEYVGDTEDFINIMLDDKQNQLLQMG 376

Query: 347 VLLSAANMILNAGIVVVGLFGMNIHITLFD-APTIKFWQTTCGTIGGCLALYLIAVGWGK 405
           V+LS ANMI+NAGIVVVGLFGMNI I+LFD  P+ KF +TT GT+G C+ALYLIA  WGK
Sbjct: 377 VMLSTANMIINAGIVVVGLFGMNITISLFDGGPSTKFLETTLGTLGSCVALYLIAFVWGK 436

Query: 406 KKIMLST 412
           KK +L +
Sbjct: 437 KKKLLGS 443




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480660|ref|XP_002273137.2| PREDICTED: magnesium transporter MRS2-F-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224096135|ref|XP_002310545.1| magnesium transporter [Populus trichocarpa] gi|222853448|gb|EEE90995.1| magnesium transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224096137|ref|XP_002310546.1| magnesium transporter [Populus trichocarpa] gi|222853449|gb|EEE90996.1| magnesium transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356547452|ref|XP_003542126.1| PREDICTED: magnesium transporter MRS2-F-like [Glycine max] Back     alignment and taxonomy information
>gi|242059611|ref|XP_002458951.1| hypothetical protein SORBIDRAFT_03g043270 [Sorghum bicolor] gi|241930926|gb|EES04071.1| hypothetical protein SORBIDRAFT_03g043270 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|75272453|sp|Q8L4S2.1|MRS2F_ORYSJ RecName: Full=Magnesium transporter MRS2-F gi|296439704|sp|A2WY50.1|MRS2F_ORYSI RecName: Full=Magnesium transporter MRS2-F gi|20804892|dbj|BAB92573.1| P0497A05.17 [Oryza sativa Japonica Group] gi|20804927|dbj|BAB92606.1| putative MRS2-7 [Oryza sativa Japonica Group] gi|56785118|dbj|BAD82756.1| putative MRS2-7 [Oryza sativa Japonica Group] gi|125528782|gb|EAY76896.1| hypothetical protein OsI_04855 [Oryza sativa Indica Group] gi|125573041|gb|EAZ14556.1| hypothetical protein OsJ_04478 [Oryza sativa Japonica Group] gi|215767981|dbj|BAH00210.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|414879112|tpg|DAA56243.1| TPA: hypothetical protein ZEAMMB73_736343 [Zea mays] Back     alignment and taxonomy information
>gi|326501706|dbj|BAK02642.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|357126420|ref|XP_003564885.1| PREDICTED: magnesium transporter MRS2-F-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query412
TAIR|locus:2091176484 MGT4 "magnesium transporter 4" 0.584 0.497 0.610 1.4e-101
TAIR|locus:2025767443 MGT1 "magnesium transporter 1" 0.225 0.209 0.720 2.8e-82
TAIR|locus:2200542442 MGT2 "magnesium transporter 2" 0.240 0.223 0.705 1.2e-81
TAIR|locus:2044254421 MGT3 "magnesium transporter 3" 0.213 0.209 0.647 2.3e-73
TAIR|locus:2139905408 MGT5 "AT4G28580" [Arabidopsis 0.558 0.563 0.385 6.9e-53
TAIR|locus:2174799394 MGT9 "magnesium transporter 9" 0.665 0.695 0.382 5e-44
TAIR|locus:2077665436 MGT6 "magnesium transporter 6" 0.919 0.869 0.305 2.3e-39
TAIR|locus:2144746294 AT5G09720 [Arabidopsis thalian 0.310 0.435 0.442 3.6e-26
POMBASE|SPBC25H2.08c422 mrs2 "magnesium ion transporte 0.25 0.244 0.386 6.6e-24
UNIPROTKB|Q6C8H7455 LPE10 "Mitochondrial inner mem 0.177 0.160 0.328 2.1e-19
TAIR|locus:2091176 MGT4 "magnesium transporter 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 694 (249.4 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
 Identities = 152/249 (61%), Positives = 180/249 (72%)

Query:    22 RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIV 81
             +KG+G+RTWLV++ SGQS  +E GKH IMRRTGLPARDLR+LDPLLSYPS++LGRERAIV
Sbjct:    39 KKGVGVRTWLVLNSSGQSEPKEEGKHSIMRRTGLPARDLRILDPLLSYPSTVLGRERAIV 98

Query:    82 INLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEME---RED 138
             INLEHIKAI+TA+EVL+L S +P V  F+ +LQ RI      +  Q  +    E   R D
Sbjct:    99 INLEHIKAIITAQEVLLLNSKDPSVSPFIDELQRRILCHHHATKPQEEQNSGGEPHTRVD 158

Query:   139 KAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGPKVLAFEFRALESCLESACRCLD 198
              A+   +G  Q +        S  +KD         G KVL FEF ALE+CLE+A   L+
Sbjct:   159 PAQGE-AGTEQSS----GDQGSEAKKDAKQSLENQDGSKVLPFEFVALEACLEAASSSLE 213

Query:   199 SETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDM 258
              E   LE EA+PALD+LT+KISTLNLERVRQIKSRLVAI GRVQKVRDE+EHLLDDD DM
Sbjct:   214 HEALRLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDM 273

Query:   259 AEMYLTEKL 267
             AEMYLTEKL
Sbjct:   274 AEMYLTEKL 282


GO:0005634 "nucleus" evidence=ISM
GO:0016020 "membrane" evidence=IEA;ISS
GO:0030001 "metal ion transport" evidence=IEA;ISS
GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0015095 "magnesium ion transmembrane transporter activity" evidence=IDA
GO:0009644 "response to high light intensity" evidence=RCA
GO:0042542 "response to hydrogen peroxide" evidence=RCA
TAIR|locus:2025767 MGT1 "magnesium transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200542 MGT2 "magnesium transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044254 MGT3 "magnesium transporter 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139905 MGT5 "AT4G28580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174799 MGT9 "magnesium transporter 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077665 MGT6 "magnesium transporter 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144746 AT5G09720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPBC25H2.08c mrs2 "magnesium ion transporter Mrs2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|Q6C8H7 LPE10 "Mitochondrial inner membrane magnesium transporter LPE10" [Yarrowia lipolytica CLIB122 (taxid:284591)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A2WY50MRS2F_ORYSINo assigned EC number0.57980.90530.8400N/Ano
Q9LJN2MRS23_ARATHNo assigned EC number0.51350.91260.7768yesno
Q8L4S2MRS2F_ORYSJNo assigned EC number0.57980.90530.8400yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00019261001
SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (408 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
cd12823323 cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae 1e-109
>gnl|CDD|213357 cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae inner mitochondrial membrane Mg2+ transporters Mfm1p and Mrs2p-like family Back     alignment and domain information
 Score =  324 bits (834), Expect = e-109
 Identities = 153/382 (40%), Positives = 215/382 (56%), Gaps = 65/382 (17%)

Query: 30  WLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDP-LLSYPSSILGRERAIVINLEHIK 88
           W V+  +G + V E+ K  ++R  GL  RDLR+LDP L SYP SIL RE AI++NLEHI+
Sbjct: 1   WTVIDSTGNATVVELDKSELLRELGLQPRDLRLLDPTLTSYPPSILVRENAILVNLEHIR 60

Query: 89  AIVTAKEVLML---YSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLS 145
           AI+TA EVL+     S++ LV  F+++LQ R++S                          
Sbjct: 61  AIITADEVLLFDPDGSSSALVSAFLEELQRRLAS-------------------------- 94

Query: 146 GPSQHTLRRRASISSNERKDDAPETSVVAGPKVLAFEFRALESCLESACRCLDSETRTLE 205
                                    S   G   L FEFRALE+ LE  C  L++E + LE
Sbjct: 95  --------------------SNGSESESGGEDSLPFEFRALEAALEEVCSHLEAELKRLE 134

Query: 206 EEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMAEMYLTE 265
            EA P LDELT KIST NLER+  +K RLV +  RVQKVRD +E LLDDD DMA+MYLT+
Sbjct: 135 PEALPLLDELTDKISTSNLERLLPLKRRLVELETRVQKVRDALEELLDDDEDMADMYLTD 194

Query: 266 KLNASKEEVSDEDDDRSENNSQNFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVD 325
           K    +   S   +D              + EE+EMLLEAY  Q+D +L KL ++ EY+D
Sbjct: 195 KAAGPERLESSRKED--------------DHEEVEMLLEAYLQQVDELLNKLEELREYID 240

Query: 326 DTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQT 385
           DTE+ IN++LD  +NQL+++ + LS   + L  G +V GLFGMN+   L ++P   FW  
Sbjct: 241 DTEELINLILDSRRNQLMRLELKLSIGTLSLAVGTLVAGLFGMNLPSGLEESPYA-FWIV 299

Query: 386 TCGTIGGCLALYLIAVGWGKKK 407
           T G++ G + ++++ + + ++K
Sbjct: 300 TGGSVVGSILIFIVVLRYLRRK 321


A eukaryotic subfamily belonging to the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This functionally diverse subfamily includes the inner mitochondrial membrane Mg2+ transporters Saccharomyces cerevisiae Mfm1p/Lpe10p, Mrs2p, and human MRS2/ MRS2L. It also includes a family of Arabidopsis thaliana proteins (AtMGTs) some of which are localized to distinct tissues, and not all of which can transport Mg2+. Structures of the intracellular domain of two EcCorA_ZntB-like family transporters: Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, as in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport. Length = 323

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 412
KOG2662414 consensus Magnesium transporters: CorA family [Ino 100.0
COG0598322 CorA Mg2+ and Co2+ transporters [Inorganic ion tra 100.0
TIGR00383318 corA magnesium Mg(2+) and cobalt Co(2+) transport 100.0
PRK09546324 zntB zinc transporter; Reviewed 100.0
PRK11085316 magnesium/nickel/cobalt transporter CorA; Provisio 99.97
PF01544292 CorA: CorA-like Mg2+ transporter protein; InterPro 99.97
PRK11085316 magnesium/nickel/cobalt transporter CorA; Provisio 95.39
PF10267395 Tmemb_cc2: Predicted transmembrane and coiled-coil 93.88
PF07332121 DUF1469: Protein of unknown function (DUF1469); In 90.51
PF0265673 DUF202: Domain of unknown function (DUF202); Inter 90.25
PF01544292 CorA: CorA-like Mg2+ transporter protein; InterPro 89.61
PRK09546324 zntB zinc transporter; Reviewed 83.97
COG0598322 CorA Mg2+ and Co2+ transporters [Inorganic ion tra 82.18
>KOG2662 consensus Magnesium transporters: CorA family [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=4.4e-78  Score=589.87  Aligned_cols=351  Identities=50%  Similarity=0.727  Sum_probs=308.7

Q ss_pred             CCCCCCCCCCceEEEEEcCCCCeeEEEehhhhhHHhcCCCchhhhhhcCCCCCCceEeeeCCeEEEecccceeeeecCee
Q 015133           17 ATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHIKAIVTAKEV   96 (412)
Q Consensus        17 ~~~~~~~~~~~~~w~~id~~g~~~~~~~~k~~l~~~~gL~~RDLr~Ld~~~s~~~~I~~R~~~Ilvnle~ir~II~~d~v   96 (412)
                      ....+++++++++|++||..|+.+..+++|++|+++.||+|||||++||++++|++|+.|++|||+||||||||||+|+|
T Consensus        54 ~~~~~~~~~~~~sw~~~D~tGn~~~~e~dK~~i~~r~~L~aRDLR~ldp~~~~~ssIl~RE~aIVlNLe~IKAIItaeeV  133 (414)
T KOG2662|consen   54 SSVSKKSGSGSRSWTRFDATGNSTVLEVDKYTIMKRVGLPARDLRKLDPSLSYPSSILGRENAIVLNLEHIKAIITADEV  133 (414)
T ss_pred             cccccccCCcceEEEEEcCCCCeeeccccHHHHHHHcCCChhhhhhccccccCccccccccceEEeehhhhheeeehhhe
Confidence            35677778899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCcchhHHHHHHHHHhhhcccccccccccchhhhhhhhhhhccCCCCccccchhcccccCcCCCCCCCccccCCC
Q 015133           97 LMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGP  176 (412)
Q Consensus        97 llf~~~~~~~~~f~~~l~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (412)
                      ++||+.++ +.++.+++++|+...+.+...                                     +.+..    ....
T Consensus       134 ll~d~~~~-v~~~~~el~~~l~~~~~~~~~-------------------------------------q~s~~----~~~~  171 (414)
T KOG2662|consen  134 LLLDSLDP-VIPYNEELQRRLPVELESRGN-------------------------------------QLSSD----GGSK  171 (414)
T ss_pred             eEeccccc-cchHHHHHHHHhccccccccc-------------------------------------ccCCC----CCCC
Confidence            99999988 889999999999876532100                                     00000    0114


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Q 015133          177 KVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDN  256 (412)
Q Consensus       177 ~~lpFEl~~LE~il~~~~~~Le~~~~~le~~~~~ild~l~~~~~~~~L~~L~~lk~~L~~l~~~v~~vre~l~~Ll~~d~  256 (412)
                      +.+||||||||++++.+|..|++++..+|..++++||+|+.++++.+|++|+.+|++|+.|.++++.+||+|++||+||+
T Consensus       172 ~~lPFEFrALE~aLe~~~s~L~~~~~~Le~~~~~~LdeLt~~is~~nL~~lr~~k~~Lt~l~~rvqkvRDeLe~LLddd~  251 (414)
T KOG2662|consen  172 DELPFEFRALEVALEAACSFLDSRLSELETEAYPLLDELTNKISTLNLERLRILKKRLTELTSRVQKVRDELEELLDDDD  251 (414)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhhhcccccC----CCcc----ccc-cccCCCCcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhH
Q 015133          257 DMAEMYLTEKLNASKEEV----SDED----DDR-SENNSQNFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDT  327 (412)
Q Consensus       257 dm~~m~Lt~~~~~~~~~~----~~~~----~~~-~~~~~~~~~~~~~~~eEvE~LLE~Y~~~~d~~~~~l~~l~e~i~~t  327 (412)
                      ||++||||+|+.+...+.    ++..    .+. +..... .-...+++||+|||||+||+|+|++.+++++++++|++|
T Consensus       252 Dma~mYLT~K~~~~~~~~~~~~sp~~~~~~~r~~~~~~~s-~~~~~dd~eElEMLLEaYf~qiD~~~nk~~~Lre~IddT  330 (414)
T KOG2662|consen  252 DMAEMYLTRKLAQASSPESAPTSPTIKAGISRAKSNRASS-TVRGEDDVEELEMLLEAYFMQIDSTLNKLESLREYIDDT  330 (414)
T ss_pred             HHHHHHHhHHhhhccccccCCCCccccCCccchhhcccch-hccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence            999999999964331110    0000    000 000000 111268999999999999999999999999999999999


Q ss_pred             HHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015133          328 EDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKK  407 (412)
Q Consensus       328 ee~i~~~Ld~~rN~lmk~~l~LTi~s~i~~~~t~IaGifGMN~~~~pe~~~~~gF~~v~~~~~~~~~~l~~~~~~~frrk  407 (412)
                      ||++|++||++||++|+++++||+.|++++++++|||+||||+++.+| +.+|+|+||+++++++|+++|+..+.|+|+|
T Consensus       331 Ed~InI~LDs~RN~LiqleL~Lt~gT~~~s~~~~va~ifGMNl~~~l~-~~~~~F~~vv~~~~~~~~~lf~~i~~~~k~k  409 (414)
T KOG2662|consen  331 EDIINIQLDSNRNELIQLELLLTIGTFCLSVFSVVAGIFGMNLPSSLE-EDHYAFKWVVGITFTLCIVLFVVILGYAKLK  409 (414)
T ss_pred             HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhc-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999997 5779999999999999999999999999999


Q ss_pred             CCCC
Q 015133          408 IMLS  411 (412)
Q Consensus       408 ~wl~  411 (412)
                      |+++
T Consensus       410 rL~~  413 (414)
T KOG2662|consen  410 RLLG  413 (414)
T ss_pred             hhcC
Confidence            9875



>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) Back     alignment and domain information
>PRK09546 zntB zinc transporter; Reviewed Back     alignment and domain information
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional Back     alignment and domain information
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ] Back     alignment and domain information
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional Back     alignment and domain information
>PF10267 Tmemb_cc2: Predicted transmembrane and coiled-coil 2 protein; InterPro: IPR019394 This family of transmembrane coiled-coil containing proteins is conserved from worms to humans Back     alignment and domain information
>PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like Back     alignment and domain information
>PF02656 DUF202: Domain of unknown function (DUF202); InterPro: IPR003807 This entry describes proteins of unknown function Back     alignment and domain information
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ] Back     alignment and domain information
>PRK09546 zntB zinc transporter; Reviewed Back     alignment and domain information
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
3rkg_A261 Structural And Functional Characterization Of The Y 2e-12
>pdb|3RKG|A Chain A, Structural And Functional Characterization Of The Yeast Mg2+ Channel Mrs2 Length = 261 Back     alignment and structure

Iteration: 1

Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 77/306 (25%), Positives = 127/306 (41%), Gaps = 76/306 (24%) Query: 39 SRVEEVGKHVIMRRTGLPARDLRVLD-PLLSYPSSILGRERAIVINLEHIKAIVTAKEVL 97 S E+ K + L RDLR +D + +I+ + IVINL HIKA++ +V Sbjct: 30 SMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINLLHIKALIERDKVY 89 Query: 98 MLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLSGPSQHTLRRRAS 157 + +TNP A A LS + L + S Sbjct: 90 VFDTTNP----------------------------------SAAAKLSVL-MYDLESKLS 114 Query: 158 ISSNERKDDAPETSVVAGPKVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTT 217 + N + +E RALES + L+++ + + L++L Sbjct: 115 STKNNSQ---------------FYEHRALESIFINVMSALETDFKLHSQICIQILNDLEN 159 Query: 218 KISTLNLERVRQIKSR-LVAINGRVQKVRDEIEHLLDDDNDMAEMYLTEKLNAXXXXXXX 276 +++ L L + IKS+ L + +RD ++ LL++D+D+A MYLT K Sbjct: 160 EVNRLKLRHLL-IKSKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVK---------- 208 Query: 277 XXXXXXXXXXXXFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLD 336 S K N +LEML+E Y+ Q D +Q+ + + + TE+ +NI+LD Sbjct: 209 -------------KSPKDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILD 255 Query: 337 DTQNQL 342 +N L Sbjct: 256 ANRNSL 261

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
3rkg_A261 Magnesium transporter MRS2, mitochondrial; matrix 2e-64
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} Length = 261 Back     alignment and structure
 Score =  206 bits (524), Expect = 2e-64
 Identities = 72/328 (21%), Positives = 125/328 (38%), Gaps = 76/328 (23%)

Query: 18  TPRPRKGMGLRTWLVVSESGQSRV--EEVGKHVIMRRTGLPARDLRVLD-PLLSYPSSIL 74
            P         +  V +  G      E+  K   +    L  RDLR +D   +    +I+
Sbjct: 7   KPISASDSLFISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIM 66

Query: 75  GRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEM 134
            +   IVINL HIKA++   +V +  +TNP     +  L + +                 
Sbjct: 67  CKPNCIVINLLHIKALIERDKVYVFDTTNPSAAAKLSVLMYDL----------------- 109

Query: 135 EREDKAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGPKVLAFEFRALESCLESAC 194
                 E+ LS    ++                             +E RALES   +  
Sbjct: 110 ------ESKLSSTKNNSQF---------------------------YEHRALESIFINVM 136

Query: 195 RCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDD 254
             L+++ +   +     L++L  +++ L L  +      L     +   +RD ++ LL++
Sbjct: 137 SALETDFKLHSQICIQILNDLENEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLEN 196

Query: 255 DNDMAEMYLTEKLNASKEEVSDEDDDRSENNSQNFTSFKPNVEELEMLLEAYFAQIDGIL 314
           D+D+A MYLT                          S K N  +LEML+E Y+ Q D  +
Sbjct: 197 DDDLANMYLTV-----------------------KKSPKDNFSDLEMLIETYYTQCDEYV 233

Query: 315 QKLSDMSEYVDDTEDCINIMLDDTQNQL 342
           Q+   + + +  TE+ +NI+LD  +N L
Sbjct: 234 QQSESLIQDIKSTEEIVNIILDANRNSL 261


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query412
3rkg_A261 Magnesium transporter MRS2, mitochondrial; matrix 100.0
2iub_A363 CORA, divalent cation transport-related protein; m 100.0
4ev6_A339 Magnesium transport protein CORA; membrane protein 100.0
4egw_A280 Magnesium transport protein CORA; magnesium transp 99.73
3nvo_A264 Zinc transport protein ZNTB; alpha-beta-alpha sand 99.58
3ck6_A252 Putative membrane transport protein; APC91421.1, Z 99.56
2bbh_A269 Divalent cation transport-related protein; transpo 99.23
2hn1_A266 CORA, magnesium and cobalt transporter; integral m 99.19
4ev6_A339 Magnesium transport protein CORA; membrane protein 93.34
2iub_A363 CORA, divalent cation transport-related protein; m 91.45
1cn3_F29 Fragment of coat protein VP2; viral coat protein V 85.15
>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=1.4e-53  Score=405.87  Aligned_cols=239  Identities=30%  Similarity=0.450  Sum_probs=220.0

Q ss_pred             ceEEEEEcCCCCeeEEE--ehhhhhHHhcCCCchhhhhhcCCC-CCCceEeeeCCeEEEecccceeeeecCeeEEecCCC
Q 015133           27 LRTWLVVSESGQSRVEE--VGKHVIMRRTGLPARDLRVLDPLL-SYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTN  103 (412)
Q Consensus        27 ~~~w~~id~~g~~~~~~--~~k~~l~~~~gL~~RDLr~Ld~~~-s~~~~I~~R~~~Ilvnle~ir~II~~d~vllf~~~~  103 (412)
                      ..+|.+||..|++...+  ++|++|++++||+|||||+|||.. +.+|+|++|++|||||++||||||++|+|++|++.+
T Consensus        16 ~~~ct~fD~~G~~~~~~~~~~K~~l~~~~~L~~RDLR~ld~~~~~~~PsIl~R~~aIlvnL~~irAII~~d~Vllfd~~~   95 (261)
T 3rkg_A           16 FISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINLLHIKALIERDKVYVFDTTN   95 (261)
T ss_dssp             EEEEEEECTTSCEEEEEEEEEHHHHHHHTTCCGGGGGGTSSCCSSCCCEEEECSSCEEEEETTEEEEECSSCEEEECCSC
T ss_pred             eEEEEEECCCCCEEEecccccHHHHHHHcCCChhhHHHhcccccCCCceEEecCCeEEEechhceEEEEcceEEEEcCCC
Confidence            57899999999988865  899999999999999999999975 578899999999999999999999999999999998


Q ss_pred             cchh----HHHHHHHHHhhhcccccccccccchhhhhhhhhhhccCCCCccccchhcccccCcCCCCCCCccccCCCccc
Q 015133          104 PLVV----QFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGPKVL  179 (412)
Q Consensus       104 ~~~~----~f~~~l~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  179 (412)
                      +.+.    .|+++++.|+++++                                                      .+.+
T Consensus        96 ~~~~~~~~~f~~~l~~~l~~~~------------------------------------------------------~~~l  121 (261)
T 3rkg_A           96 PSAAAKLSVLMYDLESKLSSTK------------------------------------------------------NNSQ  121 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSS------------------------------------------------------CCSS
T ss_pred             chhhhhHHHHHHHHHHHhccCC------------------------------------------------------CCCC
Confidence            7664    58899988886431                                                      2479


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCchhH
Q 015133          180 AFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMA  259 (412)
Q Consensus       180 pFEl~~LE~il~~~~~~Le~~~~~le~~~~~ild~l~~~~~~~~L~~L~~lk~~L~~l~~~v~~vre~l~~Ll~~d~dm~  259 (412)
                      ||||+|||+||.++|..|++++..++..+.+++++|++++++..|++|+..+++|+.|.++++.+|++|+++|++|+||+
T Consensus       122 PFEfraLEa~L~~v~~~Le~e~~~l~~~~~~~L~~L~~~i~~~~L~~Ll~~~k~L~~~~~kv~~vr~~leelLddDeDm~  201 (261)
T 3rkg_A          122 FYEHRALESIFINVMSALETDFKLHSQICIQILNDLENEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLA  201 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhcccccCCCccccccccCCCCcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHhHHHH
Q 015133          260 EMYLTEKLNASKEEVSDEDDDRSENNSQNFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQ  339 (412)
Q Consensus       260 ~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eEvE~LLE~Y~~~~d~~~~~l~~l~e~i~~tee~i~~~Ld~~r  339 (412)
                      .||||++.                       ...++|+|+|||||+||+|+|++.++++.++++|++|||++++.||++|
T Consensus       202 ~myLT~k~-----------------------~~~~d~eElEmLLE~Y~~q~d~~~~~~~~L~~~I~~TEe~i~i~LD~~R  258 (261)
T 3rkg_A          202 NMYLTVKK-----------------------SPKDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANR  258 (261)
T ss_dssp             HTCCSSCC-----------------------CTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HhhccCCC-----------------------CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99999763                       2356899999999999999999999999999999999999999999999


Q ss_pred             HHH
Q 015133          340 NQL  342 (412)
Q Consensus       340 N~l  342 (412)
                      |++
T Consensus       259 N~L  261 (261)
T 3rkg_A          259 NSL  261 (261)
T ss_dssp             ---
T ss_pred             cCC
Confidence            985



>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A Back     alignment and structure
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii} Back     alignment and structure
>4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii} Back     alignment and structure
>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A Back     alignment and structure
>3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A* Back     alignment and structure
>2bbh_A Divalent cation transport-related protein; transporter, Mg, membrane, structural genomics, structural G consortium, SGC; HET: DMU; 1.85A {Thermotoga maritima} SCOP: d.328.1.1 Back     alignment and structure
>2hn1_A CORA, magnesium and cobalt transporter; integral membrane protein fragment, metal transporter protei divalent cations, metal transport; 2.90A {Archaeoglobus fulgidus} Back     alignment and structure
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii} Back     alignment and structure
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A Back     alignment and structure
>1cn3_F Fragment of coat protein VP2; viral coat protein VP1, viral coat protein VP2, viral entry, viral protein; 2.20A {Polyomavirus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query412
d2iuba264 Magnesium transport protein CorA {Thermotoga marit 99.74
d2bbha1232 Magnesium transport protein CorA, soluble domain { 99.43
d1lrza165 Methicillin resistance protein FemA probable tRNA- 83.6
>d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Transmembrane helix hairpin
superfamily: Magnesium transport protein CorA, transmembrane region
family: Magnesium transport protein CorA, transmembrane region
domain: Magnesium transport protein CorA
species: Thermotoga maritima [TaxId: 2336]
Probab=99.74  E-value=4.2e-19  Score=132.10  Aligned_cols=64  Identities=19%  Similarity=0.147  Sum_probs=43.3

Q ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015133          338 TQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKKI  408 (412)
Q Consensus       338 ~rN~lmk~~l~LTi~s~i~~~~t~IaGifGMN~~~~pe~~~~~gF~~v~~~~~~~~~~l~~~~~~~frrk~  408 (412)
                      ++|++||   +||++|++|+|+|+|||+||||++++|+.++++|||++++++++    +.+++++||||||
T Consensus         1 r~N~~mk---~lT~it~iflP~t~i~gifGMN~~~~P~~~~~~~~~~~~~~~~~----~~~~~~~~f~rkk   64 (64)
T d2iuba2           1 KTNEVMK---VLTIIATIFMPLTFIAGIYGMNFEYMPELRWKWGYPVVLAVMGV----IAVIMVVYFKKKK   64 (64)
T ss_dssp             HHHHHHH---HHHHHHHHHHHHHHHTTSCC--------------CHHHHHHHHH----HHHHHHTTTTSCC
T ss_pred             ChhHHHH---HHHHHHHHHHHHHHHHhhhccCCCCCCCCCccHHHHHHHHHHHH----HHHHHHHHHhccC
Confidence            6899999   69999999999999999999999999999999999999887643    3456778899986



>d2bbha1 d.328.1.1 (A:13-244) Magnesium transport protein CorA, soluble domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure