Citrus Sinensis ID: 015133
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 412 | ||||||
| 296082627 | 443 | unnamed protein product [Vitis vinifera] | 0.934 | 0.869 | 0.674 | 1e-153 | |
| 359480660 | 401 | PREDICTED: magnesium transporter MRS2-F- | 0.868 | 0.892 | 0.667 | 1e-147 | |
| 224096135 | 386 | magnesium transporter [Populus trichocar | 0.893 | 0.953 | 0.672 | 1e-141 | |
| 224096137 | 405 | magnesium transporter [Populus trichocar | 0.929 | 0.945 | 0.639 | 1e-135 | |
| 356547452 | 405 | PREDICTED: magnesium transporter MRS2-F- | 0.946 | 0.962 | 0.587 | 1e-128 | |
| 242059611 | 443 | hypothetical protein SORBIDRAFT_03g04327 | 0.922 | 0.857 | 0.587 | 1e-127 | |
| 75272453 | 444 | RecName: Full=Magnesium transporter MRS2 | 0.905 | 0.840 | 0.579 | 1e-127 | |
| 414879112 | 443 | TPA: hypothetical protein ZEAMMB73_73634 | 0.915 | 0.851 | 0.575 | 1e-126 | |
| 326501706 | 450 | predicted protein [Hordeum vulgare subsp | 0.919 | 0.842 | 0.579 | 1e-124 | |
| 357126420 | 450 | PREDICTED: magnesium transporter MRS2-F- | 0.912 | 0.835 | 0.570 | 1e-123 |
| >gi|296082627|emb|CBI21632.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 288/427 (67%), Positives = 334/427 (78%), Gaps = 42/427 (9%)
Query: 22 RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIV 81
RKG+G+R WLVV ESGQS +EE+GKH +MRRTGLPARDLRVLDP+LSYPS+ILGRERAIV
Sbjct: 23 RKGIGIRAWLVVLESGQSHLEELGKHSVMRRTGLPARDLRVLDPVLSYPSTILGRERAIV 82
Query: 82 INLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAE 141
INLEHIKAI+TAKEVLM+ S NPL+VQFV+DLQHR+ A+ E + E ED A+
Sbjct: 83 INLEHIKAIITAKEVLMVNSNNPLIVQFVEDLQHRVMPKPAM------ESHDKEIEDAAD 136
Query: 142 ANLSGPSQHTL-------RRRASISSN--------ERKDDAPETS----VVAGPKVLAFE 182
AN PS H R+R S N + K+D+P+TS V AGPKVL FE
Sbjct: 137 ANWGSPSVHGFNGSVTNSRKRPSQRVNVSSEVLNVDVKEDSPKTSEDERVAAGPKVLPFE 196
Query: 183 FRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQ 242
FRALE+CLESACRCL+SET+TLE+EAYPALDELT+ ISTLNLERVRQIKSRLVAI+GRVQ
Sbjct: 197 FRALEACLESACRCLESETQTLEQEAYPALDELTSNISTLNLERVRQIKSRLVAISGRVQ 256
Query: 243 KVRDEIEHLLDDDNDMAEMYLTEKL-------NASKEEVSD----EDDDRSENNSQN--- 288
KVRDE+EHLLDDDNDMAEM+LTEKL ++ KEE+ + EDD+R+E +
Sbjct: 257 KVRDELEHLLDDDNDMAEMFLTEKLVRPSLDQSSIKEELCNDELEEDDERTEESKSESNS 316
Query: 289 --FTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQNQLLQMG 346
F+ FKPNVEELEMLLEAYF Q+DGILQKLSDMSEYV DTED INIMLDD QNQLLQMG
Sbjct: 317 EIFSGFKPNVEELEMLLEAYFVQVDGILQKLSDMSEYVGDTEDFINIMLDDKQNQLLQMG 376
Query: 347 VLLSAANMILNAGIVVVGLFGMNIHITLFD-APTIKFWQTTCGTIGGCLALYLIAVGWGK 405
V+LS ANMI+NAGIVVVGLFGMNI I+LFD P+ KF +TT GT+G C+ALYLIA WGK
Sbjct: 377 VMLSTANMIINAGIVVVGLFGMNITISLFDGGPSTKFLETTLGTLGSCVALYLIAFVWGK 436
Query: 406 KKIMLST 412
KK +L +
Sbjct: 437 KKKLLGS 443
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359480660|ref|XP_002273137.2| PREDICTED: magnesium transporter MRS2-F-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224096135|ref|XP_002310545.1| magnesium transporter [Populus trichocarpa] gi|222853448|gb|EEE90995.1| magnesium transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224096137|ref|XP_002310546.1| magnesium transporter [Populus trichocarpa] gi|222853449|gb|EEE90996.1| magnesium transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356547452|ref|XP_003542126.1| PREDICTED: magnesium transporter MRS2-F-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|242059611|ref|XP_002458951.1| hypothetical protein SORBIDRAFT_03g043270 [Sorghum bicolor] gi|241930926|gb|EES04071.1| hypothetical protein SORBIDRAFT_03g043270 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
| >gi|75272453|sp|Q8L4S2.1|MRS2F_ORYSJ RecName: Full=Magnesium transporter MRS2-F gi|296439704|sp|A2WY50.1|MRS2F_ORYSI RecName: Full=Magnesium transporter MRS2-F gi|20804892|dbj|BAB92573.1| P0497A05.17 [Oryza sativa Japonica Group] gi|20804927|dbj|BAB92606.1| putative MRS2-7 [Oryza sativa Japonica Group] gi|56785118|dbj|BAD82756.1| putative MRS2-7 [Oryza sativa Japonica Group] gi|125528782|gb|EAY76896.1| hypothetical protein OsI_04855 [Oryza sativa Indica Group] gi|125573041|gb|EAZ14556.1| hypothetical protein OsJ_04478 [Oryza sativa Japonica Group] gi|215767981|dbj|BAH00210.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|414879112|tpg|DAA56243.1| TPA: hypothetical protein ZEAMMB73_736343 [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|326501706|dbj|BAK02642.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
|---|
| >gi|357126420|ref|XP_003564885.1| PREDICTED: magnesium transporter MRS2-F-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 412 | ||||||
| TAIR|locus:2091176 | 484 | MGT4 "magnesium transporter 4" | 0.584 | 0.497 | 0.610 | 1.4e-101 | |
| TAIR|locus:2025767 | 443 | MGT1 "magnesium transporter 1" | 0.225 | 0.209 | 0.720 | 2.8e-82 | |
| TAIR|locus:2200542 | 442 | MGT2 "magnesium transporter 2" | 0.240 | 0.223 | 0.705 | 1.2e-81 | |
| TAIR|locus:2044254 | 421 | MGT3 "magnesium transporter 3" | 0.213 | 0.209 | 0.647 | 2.3e-73 | |
| TAIR|locus:2139905 | 408 | MGT5 "AT4G28580" [Arabidopsis | 0.558 | 0.563 | 0.385 | 6.9e-53 | |
| TAIR|locus:2174799 | 394 | MGT9 "magnesium transporter 9" | 0.665 | 0.695 | 0.382 | 5e-44 | |
| TAIR|locus:2077665 | 436 | MGT6 "magnesium transporter 6" | 0.919 | 0.869 | 0.305 | 2.3e-39 | |
| TAIR|locus:2144746 | 294 | AT5G09720 [Arabidopsis thalian | 0.310 | 0.435 | 0.442 | 3.6e-26 | |
| POMBASE|SPBC25H2.08c | 422 | mrs2 "magnesium ion transporte | 0.25 | 0.244 | 0.386 | 6.6e-24 | |
| UNIPROTKB|Q6C8H7 | 455 | LPE10 "Mitochondrial inner mem | 0.177 | 0.160 | 0.328 | 2.1e-19 |
| TAIR|locus:2091176 MGT4 "magnesium transporter 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 694 (249.4 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 152/249 (61%), Positives = 180/249 (72%)
Query: 22 RKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIV 81
+KG+G+RTWLV++ SGQS +E GKH IMRRTGLPARDLR+LDPLLSYPS++LGRERAIV
Sbjct: 39 KKGVGVRTWLVLNSSGQSEPKEEGKHSIMRRTGLPARDLRILDPLLSYPSTVLGRERAIV 98
Query: 82 INLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEME---RED 138
INLEHIKAI+TA+EVL+L S +P V F+ +LQ RI + Q + E R D
Sbjct: 99 INLEHIKAIITAQEVLLLNSKDPSVSPFIDELQRRILCHHHATKPQEEQNSGGEPHTRVD 158
Query: 139 KAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGPKVLAFEFRALESCLESACRCLD 198
A+ +G Q + S +KD G KVL FEF ALE+CLE+A L+
Sbjct: 159 PAQGE-AGTEQSS----GDQGSEAKKDAKQSLENQDGSKVLPFEFVALEACLEAASSSLE 213
Query: 199 SETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDM 258
E LE EA+PALD+LT+KISTLNLERVRQIKSRLVAI GRVQKVRDE+EHLLDDD DM
Sbjct: 214 HEALRLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDM 273
Query: 259 AEMYLTEKL 267
AEMYLTEKL
Sbjct: 274 AEMYLTEKL 282
|
|
| TAIR|locus:2025767 MGT1 "magnesium transporter 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2200542 MGT2 "magnesium transporter 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2044254 MGT3 "magnesium transporter 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2139905 MGT5 "AT4G28580" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2174799 MGT9 "magnesium transporter 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2077665 MGT6 "magnesium transporter 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2144746 AT5G09720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPBC25H2.08c mrs2 "magnesium ion transporter Mrs2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6C8H7 LPE10 "Mitochondrial inner membrane magnesium transporter LPE10" [Yarrowia lipolytica CLIB122 (taxid:284591)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00019261001 | SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (408 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 412 | |||
| cd12823 | 323 | cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae | 1e-109 |
| >gnl|CDD|213357 cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae inner mitochondrial membrane Mg2+ transporters Mfm1p and Mrs2p-like family | Back alignment and domain information |
|---|
Score = 324 bits (834), Expect = e-109
Identities = 153/382 (40%), Positives = 215/382 (56%), Gaps = 65/382 (17%)
Query: 30 WLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDP-LLSYPSSILGRERAIVINLEHIK 88
W V+ +G + V E+ K ++R GL RDLR+LDP L SYP SIL RE AI++NLEHI+
Sbjct: 1 WTVIDSTGNATVVELDKSELLRELGLQPRDLRLLDPTLTSYPPSILVRENAILVNLEHIR 60
Query: 89 AIVTAKEVLML---YSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLS 145
AI+TA EVL+ S++ LV F+++LQ R++S
Sbjct: 61 AIITADEVLLFDPDGSSSALVSAFLEELQRRLAS-------------------------- 94
Query: 146 GPSQHTLRRRASISSNERKDDAPETSVVAGPKVLAFEFRALESCLESACRCLDSETRTLE 205
S G L FEFRALE+ LE C L++E + LE
Sbjct: 95 --------------------SNGSESESGGEDSLPFEFRALEAALEEVCSHLEAELKRLE 134
Query: 206 EEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMAEMYLTE 265
EA P LDELT KIST NLER+ +K RLV + RVQKVRD +E LLDDD DMA+MYLT+
Sbjct: 135 PEALPLLDELTDKISTSNLERLLPLKRRLVELETRVQKVRDALEELLDDDEDMADMYLTD 194
Query: 266 KLNASKEEVSDEDDDRSENNSQNFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVD 325
K + S +D + EE+EMLLEAY Q+D +L KL ++ EY+D
Sbjct: 195 KAAGPERLESSRKED--------------DHEEVEMLLEAYLQQVDELLNKLEELREYID 240
Query: 326 DTEDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQT 385
DTE+ IN++LD +NQL+++ + LS + L G +V GLFGMN+ L ++P FW
Sbjct: 241 DTEELINLILDSRRNQLMRLELKLSIGTLSLAVGTLVAGLFGMNLPSGLEESPYA-FWIV 299
Query: 386 TCGTIGGCLALYLIAVGWGKKK 407
T G++ G + ++++ + + ++K
Sbjct: 300 TGGSVVGSILIFIVVLRYLRRK 321
|
A eukaryotic subfamily belonging to the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This functionally diverse subfamily includes the inner mitochondrial membrane Mg2+ transporters Saccharomyces cerevisiae Mfm1p/Lpe10p, Mrs2p, and human MRS2/ MRS2L. It also includes a family of Arabidopsis thaliana proteins (AtMGTs) some of which are localized to distinct tissues, and not all of which can transport Mg2+. Structures of the intracellular domain of two EcCorA_ZntB-like family transporters: Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, as in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport. Length = 323 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 412 | |||
| KOG2662 | 414 | consensus Magnesium transporters: CorA family [Ino | 100.0 | |
| COG0598 | 322 | CorA Mg2+ and Co2+ transporters [Inorganic ion tra | 100.0 | |
| TIGR00383 | 318 | corA magnesium Mg(2+) and cobalt Co(2+) transport | 100.0 | |
| PRK09546 | 324 | zntB zinc transporter; Reviewed | 100.0 | |
| PRK11085 | 316 | magnesium/nickel/cobalt transporter CorA; Provisio | 99.97 | |
| PF01544 | 292 | CorA: CorA-like Mg2+ transporter protein; InterPro | 99.97 | |
| PRK11085 | 316 | magnesium/nickel/cobalt transporter CorA; Provisio | 95.39 | |
| PF10267 | 395 | Tmemb_cc2: Predicted transmembrane and coiled-coil | 93.88 | |
| PF07332 | 121 | DUF1469: Protein of unknown function (DUF1469); In | 90.51 | |
| PF02656 | 73 | DUF202: Domain of unknown function (DUF202); Inter | 90.25 | |
| PF01544 | 292 | CorA: CorA-like Mg2+ transporter protein; InterPro | 89.61 | |
| PRK09546 | 324 | zntB zinc transporter; Reviewed | 83.97 | |
| COG0598 | 322 | CorA Mg2+ and Co2+ transporters [Inorganic ion tra | 82.18 |
| >KOG2662 consensus Magnesium transporters: CorA family [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-78 Score=589.87 Aligned_cols=351 Identities=50% Similarity=0.727 Sum_probs=308.7
Q ss_pred CCCCCCCCCCceEEEEEcCCCCeeEEEehhhhhHHhcCCCchhhhhhcCCCCCCceEeeeCCeEEEecccceeeeecCee
Q 015133 17 ATPRPRKGMGLRTWLVVSESGQSRVEEVGKHVIMRRTGLPARDLRVLDPLLSYPSSILGRERAIVINLEHIKAIVTAKEV 96 (412)
Q Consensus 17 ~~~~~~~~~~~~~w~~id~~g~~~~~~~~k~~l~~~~gL~~RDLr~Ld~~~s~~~~I~~R~~~Ilvnle~ir~II~~d~v 96 (412)
....+++++++++|++||..|+.+..+++|++|+++.||+|||||++||++++|++|+.|++|||+||||||||||+|+|
T Consensus 54 ~~~~~~~~~~~~sw~~~D~tGn~~~~e~dK~~i~~r~~L~aRDLR~ldp~~~~~ssIl~RE~aIVlNLe~IKAIItaeeV 133 (414)
T KOG2662|consen 54 SSVSKKSGSGSRSWTRFDATGNSTVLEVDKYTIMKRVGLPARDLRKLDPSLSYPSSILGRENAIVLNLEHIKAIITADEV 133 (414)
T ss_pred cccccccCCcceEEEEEcCCCCeeeccccHHHHHHHcCCChhhhhhccccccCccccccccceEEeehhhhheeeehhhe
Confidence 35677778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCcchhHHHHHHHHHhhhcccccccccccchhhhhhhhhhhccCCCCccccchhcccccCcCCCCCCCccccCCC
Q 015133 97 LMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGP 176 (412)
Q Consensus 97 llf~~~~~~~~~f~~~l~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (412)
++||+.++ +.++.+++++|+...+.+... +.+.. ....
T Consensus 134 ll~d~~~~-v~~~~~el~~~l~~~~~~~~~-------------------------------------q~s~~----~~~~ 171 (414)
T KOG2662|consen 134 LLLDSLDP-VIPYNEELQRRLPVELESRGN-------------------------------------QLSSD----GGSK 171 (414)
T ss_pred eEeccccc-cchHHHHHHHHhccccccccc-------------------------------------ccCCC----CCCC
Confidence 99999988 889999999999876532100 00000 0114
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Q 015133 177 KVLAFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDN 256 (412)
Q Consensus 177 ~~lpFEl~~LE~il~~~~~~Le~~~~~le~~~~~ild~l~~~~~~~~L~~L~~lk~~L~~l~~~v~~vre~l~~Ll~~d~ 256 (412)
+.+||||||||++++.+|..|++++..+|..++++||+|+.++++.+|++|+.+|++|+.|.++++.+||+|++||+||+
T Consensus 172 ~~lPFEFrALE~aLe~~~s~L~~~~~~Le~~~~~~LdeLt~~is~~nL~~lr~~k~~Lt~l~~rvqkvRDeLe~LLddd~ 251 (414)
T KOG2662|consen 172 DELPFEFRALEVALEAACSFLDSRLSELETEAYPLLDELTNKISTLNLERLRILKKRLTELTSRVQKVRDELEELLDDDD 251 (414)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhhcccccC----CCcc----ccc-cccCCCCcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhH
Q 015133 257 DMAEMYLTEKLNASKEEV----SDED----DDR-SENNSQNFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDT 327 (412)
Q Consensus 257 dm~~m~Lt~~~~~~~~~~----~~~~----~~~-~~~~~~~~~~~~~~~eEvE~LLE~Y~~~~d~~~~~l~~l~e~i~~t 327 (412)
||++||||+|+.+...+. ++.. .+. +..... .-...+++||+|||||+||+|+|++.+++++++++|++|
T Consensus 252 Dma~mYLT~K~~~~~~~~~~~~sp~~~~~~~r~~~~~~~s-~~~~~dd~eElEMLLEaYf~qiD~~~nk~~~Lre~IddT 330 (414)
T KOG2662|consen 252 DMAEMYLTRKLAQASSPESAPTSPTIKAGISRAKSNRASS-TVRGEDDVEELEMLLEAYFMQIDSTLNKLESLREYIDDT 330 (414)
T ss_pred HHHHHHHhHHhhhccccccCCCCccccCCccchhhcccch-hccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 999999999964331110 0000 000 000000 111268999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 015133 328 EDCINIMLDDTQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKK 407 (412)
Q Consensus 328 ee~i~~~Ld~~rN~lmk~~l~LTi~s~i~~~~t~IaGifGMN~~~~pe~~~~~gF~~v~~~~~~~~~~l~~~~~~~frrk 407 (412)
||++|++||++||++|+++++||+.|++++++++|||+||||+++.+| +.+|+|+||+++++++|+++|+..+.|+|+|
T Consensus 331 Ed~InI~LDs~RN~LiqleL~Lt~gT~~~s~~~~va~ifGMNl~~~l~-~~~~~F~~vv~~~~~~~~~lf~~i~~~~k~k 409 (414)
T KOG2662|consen 331 EDIINIQLDSNRNELIQLELLLTIGTFCLSVFSVVAGIFGMNLPSSLE-EDHYAFKWVVGITFTLCIVLFVVILGYAKLK 409 (414)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhc-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999997 5779999999999999999999999999999
Q ss_pred CCCC
Q 015133 408 IMLS 411 (412)
Q Consensus 408 ~wl~ 411 (412)
|+++
T Consensus 410 rL~~ 413 (414)
T KOG2662|consen 410 RLLG 413 (414)
T ss_pred hhcC
Confidence 9875
|
|
| >COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) | Back alignment and domain information |
|---|
| >PRK09546 zntB zinc transporter; Reviewed | Back alignment and domain information |
|---|
| >PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional | Back alignment and domain information |
|---|
| >PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ] | Back alignment and domain information |
|---|
| >PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional | Back alignment and domain information |
|---|
| >PF10267 Tmemb_cc2: Predicted transmembrane and coiled-coil 2 protein; InterPro: IPR019394 This family of transmembrane coiled-coil containing proteins is conserved from worms to humans | Back alignment and domain information |
|---|
| >PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like | Back alignment and domain information |
|---|
| >PF02656 DUF202: Domain of unknown function (DUF202); InterPro: IPR003807 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ] | Back alignment and domain information |
|---|
| >PRK09546 zntB zinc transporter; Reviewed | Back alignment and domain information |
|---|
| >COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 412 | ||||
| 3rkg_A | 261 | Structural And Functional Characterization Of The Y | 2e-12 |
| >pdb|3RKG|A Chain A, Structural And Functional Characterization Of The Yeast Mg2+ Channel Mrs2 Length = 261 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 412 | |||
| 3rkg_A | 261 | Magnesium transporter MRS2, mitochondrial; matrix | 2e-64 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 |
| >3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} Length = 261 | Back alignment and structure |
|---|
Score = 206 bits (524), Expect = 2e-64
Identities = 72/328 (21%), Positives = 125/328 (38%), Gaps = 76/328 (23%)
Query: 18 TPRPRKGMGLRTWLVVSESGQSRV--EEVGKHVIMRRTGLPARDLRVLD-PLLSYPSSIL 74
P + V + G E+ K + L RDLR +D + +I+
Sbjct: 7 KPISASDSLFISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIM 66
Query: 75 GRERAIVINLEHIKAIVTAKEVLMLYSTNPLVVQFVQDLQHRISSLQALSTQQAGERDEM 134
+ IVINL HIKA++ +V + +TNP + L + +
Sbjct: 67 CKPNCIVINLLHIKALIERDKVYVFDTTNPSAAAKLSVLMYDL----------------- 109
Query: 135 EREDKAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGPKVLAFEFRALESCLESAC 194
E+ LS ++ +E RALES +
Sbjct: 110 ------ESKLSSTKNNSQF---------------------------YEHRALESIFINVM 136
Query: 195 RCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDD 254
L+++ + + L++L +++ L L + L + +RD ++ LL++
Sbjct: 137 SALETDFKLHSQICIQILNDLENEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLEN 196
Query: 255 DNDMAEMYLTEKLNASKEEVSDEDDDRSENNSQNFTSFKPNVEELEMLLEAYFAQIDGIL 314
D+D+A MYLT S K N +LEML+E Y+ Q D +
Sbjct: 197 DDDLANMYLTV-----------------------KKSPKDNFSDLEMLIETYYTQCDEYV 233
Query: 315 QKLSDMSEYVDDTEDCINIMLDDTQNQL 342
Q+ + + + TE+ +NI+LD +N L
Sbjct: 234 QQSESLIQDIKSTEEIVNIILDANRNSL 261
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 412 | |||
| 3rkg_A | 261 | Magnesium transporter MRS2, mitochondrial; matrix | 100.0 | |
| 2iub_A | 363 | CORA, divalent cation transport-related protein; m | 100.0 | |
| 4ev6_A | 339 | Magnesium transport protein CORA; membrane protein | 100.0 | |
| 4egw_A | 280 | Magnesium transport protein CORA; magnesium transp | 99.73 | |
| 3nvo_A | 264 | Zinc transport protein ZNTB; alpha-beta-alpha sand | 99.58 | |
| 3ck6_A | 252 | Putative membrane transport protein; APC91421.1, Z | 99.56 | |
| 2bbh_A | 269 | Divalent cation transport-related protein; transpo | 99.23 | |
| 2hn1_A | 266 | CORA, magnesium and cobalt transporter; integral m | 99.19 | |
| 4ev6_A | 339 | Magnesium transport protein CORA; membrane protein | 93.34 | |
| 2iub_A | 363 | CORA, divalent cation transport-related protein; m | 91.45 | |
| 1cn3_F | 29 | Fragment of coat protein VP2; viral coat protein V | 85.15 |
| >3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-53 Score=405.87 Aligned_cols=239 Identities=30% Similarity=0.450 Sum_probs=220.0
Q ss_pred ceEEEEEcCCCCeeEEE--ehhhhhHHhcCCCchhhhhhcCCC-CCCceEeeeCCeEEEecccceeeeecCeeEEecCCC
Q 015133 27 LRTWLVVSESGQSRVEE--VGKHVIMRRTGLPARDLRVLDPLL-SYPSSILGRERAIVINLEHIKAIVTAKEVLMLYSTN 103 (412)
Q Consensus 27 ~~~w~~id~~g~~~~~~--~~k~~l~~~~gL~~RDLr~Ld~~~-s~~~~I~~R~~~Ilvnle~ir~II~~d~vllf~~~~ 103 (412)
..+|.+||..|++...+ ++|++|++++||+|||||+|||.. +.+|+|++|++|||||++||||||++|+|++|++.+
T Consensus 16 ~~~ct~fD~~G~~~~~~~~~~K~~l~~~~~L~~RDLR~ld~~~~~~~PsIl~R~~aIlvnL~~irAII~~d~Vllfd~~~ 95 (261)
T 3rkg_A 16 FISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINLLHIKALIERDKVYVFDTTN 95 (261)
T ss_dssp EEEEEEECTTSCEEEEEEEEEHHHHHHHTTCCGGGGGGTSSCCSSCCCEEEECSSCEEEEETTEEEEECSSCEEEECCSC
T ss_pred eEEEEEECCCCCEEEecccccHHHHHHHcCCChhhHHHhcccccCCCceEEecCCeEEEechhceEEEEcceEEEEcCCC
Confidence 57899999999988865 899999999999999999999975 578899999999999999999999999999999998
Q ss_pred cchh----HHHHHHHHHhhhcccccccccccchhhhhhhhhhhccCCCCccccchhcccccCcCCCCCCCccccCCCccc
Q 015133 104 PLVV----QFVQDLQHRISSLQALSTQQAGERDEMEREDKAEANLSGPSQHTLRRRASISSNERKDDAPETSVVAGPKVL 179 (412)
Q Consensus 104 ~~~~----~f~~~l~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 179 (412)
+.+. .|+++++.|+++++ .+.+
T Consensus 96 ~~~~~~~~~f~~~l~~~l~~~~------------------------------------------------------~~~l 121 (261)
T 3rkg_A 96 PSAAAKLSVLMYDLESKLSSTK------------------------------------------------------NNSQ 121 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSS------------------------------------------------------CCSS
T ss_pred chhhhhHHHHHHHHHHHhccCC------------------------------------------------------CCCC
Confidence 7664 58899988886431 2479
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCchhH
Q 015133 180 AFEFRALESCLESACRCLDSETRTLEEEAYPALDELTTKISTLNLERVRQIKSRLVAINGRVQKVRDEIEHLLDDDNDMA 259 (412)
Q Consensus 180 pFEl~~LE~il~~~~~~Le~~~~~le~~~~~ild~l~~~~~~~~L~~L~~lk~~L~~l~~~v~~vre~l~~Ll~~d~dm~ 259 (412)
||||+|||+||.++|..|++++..++..+.+++++|++++++..|++|+..+++|+.|.++++.+|++|+++|++|+||+
T Consensus 122 PFEfraLEa~L~~v~~~Le~e~~~l~~~~~~~L~~L~~~i~~~~L~~Ll~~~k~L~~~~~kv~~vr~~leelLddDeDm~ 201 (261)
T 3rkg_A 122 FYEHRALESIFINVMSALETDFKLHSQICIQILNDLENEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLA 201 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccCCCccccccccCCCCcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHhHHHH
Q 015133 260 EMYLTEKLNASKEEVSDEDDDRSENNSQNFTSFKPNVEELEMLLEAYFAQIDGILQKLSDMSEYVDDTEDCINIMLDDTQ 339 (412)
Q Consensus 260 ~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eEvE~LLE~Y~~~~d~~~~~l~~l~e~i~~tee~i~~~Ld~~r 339 (412)
.||||++. ...++|+|+|||||+||+|+|++.++++.++++|++|||++++.||++|
T Consensus 202 ~myLT~k~-----------------------~~~~d~eElEmLLE~Y~~q~d~~~~~~~~L~~~I~~TEe~i~i~LD~~R 258 (261)
T 3rkg_A 202 NMYLTVKK-----------------------SPKDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANR 258 (261)
T ss_dssp HTCCSSCC-----------------------CTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhhccCCC-----------------------CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999763 2356899999999999999999999999999999999999999999999
Q ss_pred HHH
Q 015133 340 NQL 342 (412)
Q Consensus 340 N~l 342 (412)
|++
T Consensus 259 N~L 261 (261)
T 3rkg_A 259 NSL 261 (261)
T ss_dssp ---
T ss_pred cCC
Confidence 985
|
| >2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A | Back alignment and structure |
|---|
| >4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A | Back alignment and structure |
|---|
| >3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A* | Back alignment and structure |
|---|
| >2bbh_A Divalent cation transport-related protein; transporter, Mg, membrane, structural genomics, structural G consortium, SGC; HET: DMU; 1.85A {Thermotoga maritima} SCOP: d.328.1.1 | Back alignment and structure |
|---|
| >2hn1_A CORA, magnesium and cobalt transporter; integral membrane protein fragment, metal transporter protei divalent cations, metal transport; 2.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A | Back alignment and structure |
|---|
| >1cn3_F Fragment of coat protein VP2; viral coat protein VP1, viral coat protein VP2, viral entry, viral protein; 2.20A {Polyomavirus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 412 | |||
| d2iuba2 | 64 | Magnesium transport protein CorA {Thermotoga marit | 99.74 | |
| d2bbha1 | 232 | Magnesium transport protein CorA, soluble domain { | 99.43 | |
| d1lrza1 | 65 | Methicillin resistance protein FemA probable tRNA- | 83.6 |
| >d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Transmembrane helix hairpin superfamily: Magnesium transport protein CorA, transmembrane region family: Magnesium transport protein CorA, transmembrane region domain: Magnesium transport protein CorA species: Thermotoga maritima [TaxId: 2336]
Probab=99.74 E-value=4.2e-19 Score=132.10 Aligned_cols=64 Identities=19% Similarity=0.147 Sum_probs=43.3
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015133 338 TQNQLLQMGVLLSAANMILNAGIVVVGLFGMNIHITLFDAPTIKFWQTTCGTIGGCLALYLIAVGWGKKKI 408 (412)
Q Consensus 338 ~rN~lmk~~l~LTi~s~i~~~~t~IaGifGMN~~~~pe~~~~~gF~~v~~~~~~~~~~l~~~~~~~frrk~ 408 (412)
++|++|| +||++|++|+|+|+|||+||||++++|+.++++|||++++++++ +.+++++||||||
T Consensus 1 r~N~~mk---~lT~it~iflP~t~i~gifGMN~~~~P~~~~~~~~~~~~~~~~~----~~~~~~~~f~rkk 64 (64)
T d2iuba2 1 KTNEVMK---VLTIIATIFMPLTFIAGIYGMNFEYMPELRWKWGYPVVLAVMGV----IAVIMVVYFKKKK 64 (64)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHTTSCC--------------CHHHHHHHHH----HHHHHHTTTTSCC
T ss_pred ChhHHHH---HHHHHHHHHHHHHHHHhhhccCCCCCCCCCccHHHHHHHHHHHH----HHHHHHHHHhccC
Confidence 6899999 69999999999999999999999999999999999999887643 3456778899986
|
| >d2bbha1 d.328.1.1 (A:13-244) Magnesium transport protein CorA, soluble domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|