Citrus Sinensis ID: 015139

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410--
MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLSGKA
ccccccEEcccEEEEccccHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHHHHcEEEEcccccccHHHHHHHHHHcccccccHHHHHHHccEEEEEcEEEcccccccccccccEEEEEcccccccccEEEEEccccEEEEEEEcccccEEEEEEEEcccccEEEEEEccHHHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHcccccccccEEEcccccEEEEEccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccc
cccccEEccccEEEEEccHHHHHHHHHHHHHcccccEEccEEEEEccHHHHHHcccHHHHHHHHHHHHHcEEEEcccccccHHHHHHHccccccccHHHHHHHHHccEEEEEEccccccccccccccccEEEEEEcccHHHHcEEEEEcccEEEEEEEEEccccEEEEEEEcccccEEEEEEEEEHHHHHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHHHHcHHHHHHccccEEEEEHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHcccccEEEEEEccccccEEEEccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccc
mafqkikvanpivemdgdeMTRVFWKSIKDKLIFPFLELDIKYfdlglpnrdatddkVTVESAEATLKYNVAIkcatitpdeARVKEFVLKQMwkspngtirnilngtvfrepiicknvprlipgwtkpicigrhafgdqyratdtviqgpgklklvfegkdekteLEVYNFTGEGGVALSMYNTDESIRAFAEASMNtayqkkwplylSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGgyvwacknydgdvqsdFLAQGFGSLGLMTSvlvcpdgktieaeaahgtvtrhyrvhqkggetstnSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGtvesgkmtKDLALIIHGskmtrehylnTEEFIDAVADDLRARLSGKA
mafqkikvanpivemdgdeMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESaeatlkynvaikcatitpDEARVKEFVLkqmwkspngtirnilngtvfrepiICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTayqkkwplylSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYrvhqkggetstnSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIgtvesgkmtkdLALIIHGSKMTREHYLNTEEFIDAVADDLRARLSGKA
MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLSGKA
*******VANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVAD**********
***QKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLS***
MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLSGKA
***QKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARL****
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MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLSGKA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query412 2.2.26 [Sep-21-2011]
P50218415 Isocitrate dehydrogenase N/A no 0.990 0.983 0.917 0.0
P50217416 Isocitrate dehydrogenase N/A no 0.990 0.980 0.914 0.0
Q06197413 Isocitrate dehydrogenase yes no 0.992 0.990 0.900 0.0
Q40345433 Isocitrate dehydrogenase N/A no 0.995 0.946 0.895 0.0
P33198421 Isocitrate dehydrogenase yes no 0.975 0.954 0.700 1e-170
Q4R502452 Isocitrate dehydrogenase N/A no 0.975 0.889 0.700 1e-170
P48735452 Isocitrate dehydrogenase yes no 0.975 0.889 0.700 1e-170
Q04467452 Isocitrate dehydrogenase yes no 0.975 0.889 0.697 1e-169
P54071452 Isocitrate dehydrogenase yes no 0.975 0.889 0.697 1e-169
P56574452 Isocitrate dehydrogenase yes no 0.975 0.889 0.695 1e-169
>sp|P50218|IDHC_TOBAC Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function desciption
 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/410 (91%), Positives = 390/410 (95%), Gaps = 2/410 (0%)

Query: 1   MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTV 60
           M F KIKV NPIVEMDGDEMTRV WKSIKDKLI PFLELDIKYFDLGLP+RDATDDKVTV
Sbjct: 1   MTFDKIKVENPIVEMDGDEMTRVIWKSIKDKLICPFLELDIKYFDLGLPHRDATDDKVTV 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120
           ESAEAT KYNVAIKCATITPDEARVKEF LK MW+SPNGTIRNILNGTVFREPI+CKN+P
Sbjct: 61  ESAEATQKYNVAIKCATITPDEARVKEFNLKSMWRSPNGTIRNILNGTVFREPIMCKNIP 120

Query: 121 RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVF--EGKDEKTELEVYNFTGEGGV 178
           RL+PGWTKPICIGRHAFGDQYRATDTVIQG GKLKLVF  EG DEKTE EVYNFTG GGV
Sbjct: 121 RLVPGWTKPICIGRHAFGDQYRATDTVIQGAGKLKLVFVPEGTDEKTEFEVYNFTGAGGV 180

Query: 179 ALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 238
           ALSMYNTDES+R+FAEASMN AYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK
Sbjct: 181 ALSMYNTDESVRSFAEASMNMAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 240

Query: 239 FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 298
           +E AGIWYEHRLIDDM AYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP
Sbjct: 241 YEEAGIWYEHRLIDDMAAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300

Query: 299 DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEK 358
           DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAW+RGLAHRA LDNN RLLDFTEK
Sbjct: 301 DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEK 360

Query: 359 LEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARL 408
           LEAACIG VESGKMTKDLALIIHGSK++R+HYLNTEEFIDAVAD+L+ARL
Sbjct: 361 LEAACIGAVESGKMTKDLALIIHGSKLSRDHYLNTEEFIDAVADELKARL 410
May supply 2-oxoglutarate for amino acid biosynthesis and ammonia assimilation.
Nicotiana tabacum (taxid: 4097)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 2
>sp|P50217|IDHC_SOLTU Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2 SV=1 Back     alignment and function description
>sp|Q06197|IDHC_SOYBN Isocitrate dehydrogenase [NADP] OS=Glycine max GN=IDH1 PE=2 SV=2 Back     alignment and function description
>sp|Q40345|IDHP_MEDSA Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa PE=2 SV=1 Back     alignment and function description
>sp|P33198|IDHP_PIG Isocitrate dehydrogenase [NADP], mitochondrial (Fragment) OS=Sus scrofa GN=IDH2 PE=1 SV=1 Back     alignment and function description
>sp|Q4R502|IDHP_MACFA Isocitrate dehydrogenase [NADP], mitochondrial OS=Macaca fascicularis GN=IDH2 PE=2 SV=1 Back     alignment and function description
>sp|P48735|IDHP_HUMAN Isocitrate dehydrogenase [NADP], mitochondrial OS=Homo sapiens GN=IDH2 PE=1 SV=2 Back     alignment and function description
>sp|Q04467|IDHP_BOVIN Isocitrate dehydrogenase [NADP], mitochondrial OS=Bos taurus GN=IDH2 PE=1 SV=2 Back     alignment and function description
>sp|P54071|IDHP_MOUSE Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus GN=Idh2 PE=1 SV=3 Back     alignment and function description
>sp|P56574|IDHP_RAT Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus GN=Idh2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query412
5764653414 NADP-isocitrate dehydrogenase [Citrus li 1.0 0.995 0.980 0.0
213493066414 NADP-dependent isocitrate dehydrogenase 1.0 0.995 0.929 0.0
224079726414 predicted protein [Populus trichocarpa] 1.0 0.995 0.929 0.0
255575226413 NADP-specific isocitrate dehydrogenase, 0.992 0.990 0.941 0.0
3811007412 NADP specific isocitrate dehydrogenase [ 0.992 0.992 0.931 0.0
2623962412 isocitrate dehydrogenase (NADP+) [Apium 0.992 0.992 0.927 0.0
82941453416 NADP-isocitrate dehydrogenase [Codonopsi 1.0 0.990 0.922 0.0
1750380416 NADP-isocitrate dehydrogenase [Eucalyptu 1.0 0.990 0.920 0.0
269994009416 NADP-dependent isocitrate dehydrogenase 1.0 0.990 0.915 0.0
15982950414 NADP-dependent isocitrate dehydrogenase 0.997 0.992 0.920 0.0
>gi|5764653|gb|AAD51361.1|AF176669_1 NADP-isocitrate dehydrogenase [Citrus limon] Back     alignment and taxonomy information
 Score =  845 bits (2182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/414 (98%), Positives = 411/414 (99%), Gaps = 2/414 (0%)

Query: 1   MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTV 60
           MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTV
Sbjct: 1   MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTV 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120
           ESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVP
Sbjct: 61  ESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120

Query: 121 RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVF--EGKDEKTELEVYNFTGEGGV 178
           RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVF  EGKDEKTELEVYNFTGEGGV
Sbjct: 121 RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTELEVYNFTGEGGV 180

Query: 179 ALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 238
           ALSMYNTDESIR+FAEASMNTAYQKKWPLYLSTKNTILK YDG+FKDIFQEVYEANWKSK
Sbjct: 181 ALSMYNTDESIRSFAEASMNTAYQKKWPLYLSTKNTILKNYDGKFKDIFQEVYEANWKSK 240

Query: 239 FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 298
           FEAAGIWYEHRLIDDMVAYALKSEGGYVWACK+YDG+VQSDFLAQGFGSLGLMTSVLVCP
Sbjct: 241 FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKDYDGNVQSDFLAQGFGSLGLMTSVLVCP 300

Query: 299 DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEK 358
           DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEK
Sbjct: 301 DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEK 360

Query: 359 LEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLSGKA 412
           LEAAC+GTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLSGKA
Sbjct: 361 LEAACVGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLSGKA 414

Source: Citrus limon

Species: Citrus limon

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|213493066|dbj|BAG84436.1| NADP-dependent isocitrate dehydrogenase [Passiflora edulis] Back     alignment and taxonomy information
>gi|224079726|ref|XP_002305928.1| predicted protein [Populus trichocarpa] gi|222848892|gb|EEE86439.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255575226|ref|XP_002528517.1| NADP-specific isocitrate dehydrogenase, putative [Ricinus communis] gi|223532077|gb|EEF33886.1| NADP-specific isocitrate dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|3811007|dbj|BAA34112.1| NADP specific isocitrate dehydrogenase [Daucus carota] Back     alignment and taxonomy information
>gi|2623962|emb|CAA73139.1| isocitrate dehydrogenase (NADP+) [Apium graveolens] Back     alignment and taxonomy information
>gi|82941453|dbj|BAE48792.1| NADP-isocitrate dehydrogenase [Codonopsis lanceolata] Back     alignment and taxonomy information
>gi|1750380|gb|AAB39248.1| NADP-isocitrate dehydrogenase [Eucalyptus globulus] Back     alignment and taxonomy information
>gi|269994009|dbj|BAI50641.1| NADP-dependent isocitrate dehydrogenase [Eucalyptus grandis x Eucalyptus urophylla] Back     alignment and taxonomy information
>gi|15982950|gb|AAL11503.1|AF367443_1 NADP-dependent isocitrate dehydrogenase [Prunus persica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query412
TAIR|locus:2009759410 cICDH "cytosolic NADP+-depende 0.992 0.997 0.894 1.6e-203
TAIR|locus:2020128416 ICDH "isocitrate dehydrogenase 0.992 0.983 0.866 1.1e-197
TAIR|locus:2222672485 AT5G14590 [Arabidopsis thalian 0.975 0.828 0.792 1.1e-176
ZFIN|ZDB-GENE-031006-1429 idh1 "isocitrate dehydrogenase 0.987 0.948 0.690 3.3e-157
UNIPROTKB|F1PAM3422 IDH2 "Isocitrate dehydrogenase 0.975 0.952 0.700 3.8e-156
UNIPROTKB|F1SK00413 IDH2 "Isocitrate dehydrogenase 0.975 0.973 0.700 1e-155
UNIPROTKB|P33198421 IDH2 "Isocitrate dehydrogenase 0.975 0.954 0.700 1e-155
UNIPROTKB|P48735452 IDH2 "Isocitrate dehydrogenase 0.975 0.889 0.700 3.5e-155
UNIPROTKB|Q4R502452 IDH2 "Isocitrate dehydrogenase 0.975 0.889 0.700 3.5e-155
MGI|MGI:96414452 Idh2 "isocitrate dehydrogenase 0.990 0.902 0.693 5.6e-155
TAIR|locus:2009759 cICDH "cytosolic NADP+-dependent isocitrate dehydrogenase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1969 (698.2 bits), Expect = 1.6e-203, P = 1.6e-203
 Identities = 366/409 (89%), Positives = 394/409 (96%)

Query:     1 MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTV 60
             MAF+KIKVANPIVEMDGDEMTRV WKSIKDKLI PF+ELDIKYFDLGLP+RDATDDKVT+
Sbjct:     1 MAFEKIKVANPIVEMDGDEMTRVIWKSIKDKLITPFVELDIKYFDLGLPHRDATDDKVTI 60

Query:    61 ESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120
             ESAEAT KYNVAIKCATITPDE RV EF LKQMW+SPNGTIRNILNGTVFREPIICKNVP
Sbjct:    61 ESAEATKKYNVAIKCATITPDEGRVTEFGLKQMWRSPNGTIRNILNGTVFREPIICKNVP 120

Query:   121 RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFTGEGGVAL 180
             +L+PGWTKPICIGRHAFGDQYRATD VI+GPGKL + FEGKD KTE EV+ FTGEGGVA+
Sbjct:   121 KLVPGWTKPICIGRHAFGDQYRATDAVIKGPGKLTMTFEGKDGKTETEVFTFTGEGGVAM 180

Query:   181 SMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 240
             +MYNTDESIRAFA+ASMNTAY+KKWPLYLSTKNTILKKYDGRFKDIFQEVYEA+WKSK++
Sbjct:   181 AMYNTDESIRAFADASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKYD 240

Query:   241 AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDG 300
             AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDG
Sbjct:   241 AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDG 300

Query:   301 KTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLE 360
             KTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD+NA+LLDFTEKLE
Sbjct:   301 KTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLE 360

Query:   361 AACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLS 409
             AAC+GTVESGKMTKDLALIIHGSK++R+ YLNTEEFIDAVA +L+ RL+
Sbjct:   361 AACVGTVESGKMTKDLALIIHGSKLSRDTYLNTEEFIDAVAAELKERLN 409
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0004450 "isocitrate dehydrogenase (NADP+) activity" evidence=IEA;ISS;IMP
GO:0006102 "isocitrate metabolic process" evidence=IEA;IMP
GO:0008152 "metabolic process" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM
GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA
GO:0051287 "NAD binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0046686 "response to cadmium ion" evidence=IEP;RCA
GO:0005507 "copper ion binding" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP;RCA
GO:0048046 "apoplast" evidence=IDA
GO:0010043 "response to zinc ion" evidence=IEP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0005829 "cytosol" evidence=IDA;NAS
GO:0006739 "NADP metabolic process" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0009506 "plasmodesma" evidence=IDA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006096 "glycolysis" evidence=RCA
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0006833 "water transport" evidence=RCA
GO:0006970 "response to osmotic stress" evidence=RCA
GO:0006972 "hyperosmotic response" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0009266 "response to temperature stimulus" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0051049 "regulation of transport" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
TAIR|locus:2020128 ICDH "isocitrate dehydrogenase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2222672 AT5G14590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-031006-1 idh1 "isocitrate dehydrogenase 1 (NADP+), soluble" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PAM3 IDH2 "Isocitrate dehydrogenase [NADP]" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SK00 IDH2 "Isocitrate dehydrogenase [NADP]" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P33198 IDH2 "Isocitrate dehydrogenase [NADP], mitochondrial" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P48735 IDH2 "Isocitrate dehydrogenase [NADP], mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q4R502 IDH2 "Isocitrate dehydrogenase [NADP], mitochondrial" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms
MGI|MGI:96414 Idh2 "isocitrate dehydrogenase 2 (NADP+), mitochondrial" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q4R502IDHP_MACFA1, ., 1, ., 1, ., 4, 20.70020.97570.8893N/Ano
Q04467IDHP_BOVIN1, ., 1, ., 1, ., 4, 20.69770.97570.8893yesno
P65097IDH_MYCTU1, ., 1, ., 1, ., 4, 20.64610.97330.9804yesno
P65098IDH_MYCBO1, ., 1, ., 1, ., 4, 20.64610.97330.9804yesno
P48735IDHP_HUMAN1, ., 1, ., 1, ., 4, 20.70020.97570.8893yesno
Q06197IDHC_SOYBN1, ., 1, ., 1, ., 4, 20.90020.99270.9903yesno
Q75JR2IDHP_DICDI1, ., 1, ., 1, ., 4, 20.65250.96350.9275yesno
P54071IDHP_MOUSE1, ., 1, ., 1, ., 4, 20.69770.97570.8893yesno
P41939IDHC_YEAST1, ., 1, ., 1, ., 4, 20.63990.98540.9854yesno
O13294IDH2_CANTR1, ., 1, ., 1, ., 4, 20.65770.97810.9805N/Ano
Q6XUZ5IDHC_SHEEP1, ., 1, ., 1, ., 4, 20.68070.96600.9613N/Ano
P33198IDHP_PIG1, ., 1, ., 1, ., 4, 20.70020.97570.9548yesno
Q40345IDHP_MEDSA1, ., 1, ., 1, ., 4, 20.89560.99510.9468N/Ano
P50217IDHC_SOLTU1, ., 1, ., 1, ., 4, 20.91480.99020.9807N/Ano
P50215IDH_SPHYA1, ., 1, ., 1, ., 4, 20.62800.97080.9852N/Ano
P50218IDHC_TOBAC1, ., 1, ., 1, ., 4, 20.91700.99020.9831N/Ano
Q9Z2K9IDHC_MICME1, ., 1, ., 1, ., 4, 20.68570.96600.9613N/Ano
Q9Z2K8IDHC_MICOH1, ., 1, ., 1, ., 4, 20.68320.96600.9613N/Ano
O13285IDH1_CANTR1, ., 1, ., 1, ., 4, 20.66660.96350.9232N/Ano
P56574IDHP_RAT1, ., 1, ., 1, ., 4, 20.69530.97570.8893yesno
O14254IDHP_SCHPO1, ., 1, ., 1, ., 4, 20.65360.97570.9157yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.1.10.998
4th Layer1.1.1.420.993

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0038019202
isocitrate dehydrogenase (NADP+) (415 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pg.C_LG_VIII0421
hypothetical protein (1021 aa)
     •• 0.907
estExt_Genewise1_v1.C_LG_X2288
hypothetical protein (1021 aa)
     •• 0.907
estExt_fgenesh4_pg.C_LG_XVI0781
SubName- Full=Putative uncharacterized protein; (363 aa)
     •••0.900
eugene3.00280188
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (361 aa)
     •••0.900
eugene3.00050378
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (339 aa)
     •• 0.900
gw1.XIV.3318.1
aconitate hydratase 1 (EC-4.2.1.3) (897 aa)
     •  0.899
eugene3.01810009
aconitate hydratase 1 (EC-4.2.1.3) (899 aa)
     •  0.899
eugene3.00570034
aconitate hydratase 1 (EC-4.2.1.3) (899 aa)
     •  0.899
estExt_fgenesh4_pm.C_LG_IX0030
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (372 aa)
     •  0.899
estExt_fgenesh4_pg.C_LG_VII0812
isocitrate dehydrogenase (NAD+) (EC-1.1.1.41) (367 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
PLN00103410 PLN00103, PLN00103, isocitrate dehydrogenase (NADP 0.0
PLN03065483 PLN03065, PLN03065, isocitrate dehydrogenase (NADP 0.0
PTZ00435413 PTZ00435, PTZ00435, isocitrate dehydrogenase; Prov 0.0
PRK08299402 PRK08299, PRK08299, isocitrate dehydrogenase; Vali 0.0
TIGR00127409 TIGR00127, nadp_idh_euk, isocitrate dehydrogenase, 0.0
COG0538407 COG0538, Icd, Isocitrate dehydrogenases [Energy pr 1e-164
pfam00180349 pfam00180, Iso_dh, Isocitrate/isopropylmalate dehy 1e-103
PLN00096393 PLN00096, PLN00096, isocitrate dehydrogenase (NADP 1e-45
PLN00118372 PLN00118, PLN00118, isocitrate dehydrogenase (NAD+ 2e-06
COG0473348 COG0473, LeuB, Isocitrate/isopropylmalate dehydrog 3e-05
TIGR02088322 TIGR02088, LEU3_arch, isopropylmalate/isohomocitra 1e-04
TIGR00175333 TIGR00175, mito_nad_idh, isocitrate dehydrogenase, 4e-04
TIGR02924 473 TIGR02924, ICDH_alpha, isocitrate dehydrogenase 5e-04
PRK14025330 PRK14025, PRK14025, multifunctional 3-isopropylmal 0.003
>gnl|CDD|177720 PLN00103, PLN00103, isocitrate dehydrogenase (NADP+); Provisional Back     alignment and domain information 
 Score =  912 bits (2358), Expect = 0.0
 Identities = 387/410 (94%), Positives = 400/410 (97%), Gaps = 2/410 (0%)

Query: 1   MAFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTV 60
           MAF+KIKVANPIVEMDGDEMTRV WKSIKDKLIFPFL+LDIKYFDLGLPNRDATDDKVTV
Sbjct: 1   MAFEKIKVANPIVEMDGDEMTRVIWKSIKDKLIFPFLDLDIKYFDLGLPNRDATDDKVTV 60

Query: 61  ESAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120
           ESAEATLKYNVAIKCATITPDEARVKEF LKQMWKSPNGTIRNILNGTVFREPIICKN+P
Sbjct: 61  ESAEATLKYNVAIKCATITPDEARVKEFGLKQMWKSPNGTIRNILNGTVFREPIICKNIP 120

Query: 121 RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVF--EGKDEKTELEVYNFTGEGGV 178
           RL+PGWTKPICIGRHAFGDQYRATD VI+GPGKLKLVF  EGKDEKTELEVYNFTG GGV
Sbjct: 121 RLVPGWTKPICIGRHAFGDQYRATDAVIKGPGKLKLVFVPEGKDEKTELEVYNFTGAGGV 180

Query: 179 ALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 238
           ALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEA WKSK
Sbjct: 181 ALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAQWKSK 240

Query: 239 FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 298
           FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP
Sbjct: 241 FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCP 300

Query: 299 DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEK 358
           DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLD NARLLDFTEK
Sbjct: 301 DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDGNARLLDFTEK 360

Query: 359 LEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARL 408
           LEAAC+GTVESGKMTKDLAL+IHG K++R+ YLNTEEFIDAVA++L+ARL
Sbjct: 361 LEAACVGTVESGKMTKDLALLIHGPKVSRDQYLNTEEFIDAVAEELKARL 410

Length = 410
>gnl|CDD|178617 PLN03065, PLN03065, isocitrate dehydrogenase (NADP+); Provisional Back     alignment and domain information
>gnl|CDD|240417 PTZ00435, PTZ00435, isocitrate dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|236226 PRK08299, PRK08299, isocitrate dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|129233 TIGR00127, nadp_idh_euk, isocitrate dehydrogenase, NADP-dependent, eukaryotic type Back     alignment and domain information
>gnl|CDD|223612 COG0538, Icd, Isocitrate dehydrogenases [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|215773 pfam00180, Iso_dh, Isocitrate/isopropylmalate dehydrogenase Back     alignment and domain information
>gnl|CDD|177715 PLN00096, PLN00096, isocitrate dehydrogenase (NADP+); Provisional Back     alignment and domain information
>gnl|CDD|215062 PLN00118, PLN00118, isocitrate dehydrogenase (NAD+) Back     alignment and domain information
>gnl|CDD|223549 COG0473, LeuB, Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233717 TIGR02088, LEU3_arch, isopropylmalate/isohomocitrate dehydrogenases Back     alignment and domain information
>gnl|CDD|232856 TIGR00175, mito_nad_idh, isocitrate dehydrogenase, NAD-dependent, mitochondrial type Back     alignment and domain information
>gnl|CDD|234062 TIGR02924, ICDH_alpha, isocitrate dehydrogenase Back     alignment and domain information
>gnl|CDD|184462 PRK14025, PRK14025, multifunctional 3-isopropylmalate dehydrogenase/D-malate dehydrogenase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 412
COG0473348 LeuB Isocitrate/isopropylmalate dehydrogenase [Ami 100.0
TIGR00127409 nadp_idh_euk isocitrate dehydrogenase, NADP-depend 100.0
PLN03065483 isocitrate dehydrogenase (NADP+); Provisional 100.0
PRK08299402 isocitrate dehydrogenase; Validated 100.0
PTZ00435413 isocitrate dehydrogenase; Provisional 100.0
PLN00103410 isocitrate dehydrogenase (NADP+); Provisional 100.0
PRK08997334 isocitrate dehydrogenase; Provisional 100.0
PLN02329409 3-isopropylmalate dehydrogenase 100.0
PRK08194352 tartrate dehydrogenase; Provisional 100.0
PLN00118372 isocitrate dehydrogenase (NAD+) 100.0
TIGR02089352 TTC tartrate dehydrogenase. Tartrate dehydrogenase 100.0
PRK14025330 multifunctional 3-isopropylmalate dehydrogenase/D- 100.0
PRK09222 482 isocitrate dehydrogenase; Validated 100.0
PRK03437344 3-isopropylmalate dehydrogenase; Provisional 100.0
PRK00772358 3-isopropylmalate dehydrogenase; Provisional 100.0
PLN00123360 isocitrate dehydrogenase (NAD+) 100.0
PRK06451412 isocitrate dehydrogenase; Validated 100.0
TIGR00169349 leuB 3-isopropylmalate dehydrogenase. This model w 100.0
TIGR02924 473 ICDH_alpha isocitrate dehydrogenase. This family o 100.0
TIGR00175333 mito_nad_idh isocitrate dehydrogenase, NAD-depende 100.0
PRK07006409 isocitrate dehydrogenase; Reviewed 100.0
TIGR02088322 LEU3_arch isopropylmalate/isohomocitrate dehydroge 100.0
KOG0785365 consensus Isocitrate dehydrogenase, alpha subunit 100.0
TIGR00183416 prok_nadp_idh isocitrate dehydrogenase, NADP-depen 100.0
PRK07362474 isocitrate dehydrogenase; Validated 100.0
PF00180348 Iso_dh: Isocitrate/isopropylmalate dehydrogenase; 100.0
PLN00096393 isocitrate dehydrogenase (NADP+); Provisional 100.0
COG0538407 Icd Isocitrate dehydrogenases [Energy production a 100.0
KOG0784375 consensus Isocitrate dehydrogenase, gamma subunit 100.0
KOG0786363 consensus 3-isopropylmalate dehydrogenase [Amino a 100.0
KOG1526422 consensus NADP-dependent isocitrate dehydrogenase 100.0
PF03971735 IDH: Monomeric isocitrate dehydrogenase; InterPro: 96.19
TIGR00178741 monomer_idh isocitrate dehydrogenase, NADP-depende 95.85
PF04166298 PdxA: Pyridoxal phosphate biosynthetic protein Pdx 93.77
PRK03371326 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 93.0
PRK00232332 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 92.97
PRK03743332 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 92.78
PRK01909329 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 92.57
PRK03946307 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 92.53
PRK05312336 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 92.51
PRK02746345 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; 92.39
TIGR00557320 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase. 92.2
COG1995332 PdxA Pyridoxal phosphate biosynthesis protein [Coe 92.18
COG2838744 Icd Monomeric isocitrate dehydrogenase [Energy pro 91.13
>COG0473 LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.6e-110  Score=820.38  Aligned_cols=339  Identities=22%  Similarity=0.255  Sum_probs=306.8

Q ss_pred             ecccEEEECCCCchHHHHHHHHHHHhcCC---CceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCCchh
Q 015139            8 VANPIVEMDGDEMTRVFWKSIKDKLIFPF---LELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR   84 (412)
Q Consensus         8 m~~~I~vi~GDGiGpEv~~~~~~vl~~~~---~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~~~~   84 (412)
                      |+++|++|||||||||||+++++||.+..   ++|+|+++++|++++++||.++|++++++++++|++|+||+++|.+.+
T Consensus         2 ~~~~IavipGDGIGpEv~~~a~kVl~a~~~~~~~~e~~~~~~G~~~~~~~G~~lpeetl~~~~~~DaiL~Gavg~P~~~~   81 (348)
T COG0473           2 KTYTIAVIPGDGIGPEVMAAALKVLEAAAEFGLDFEFEEAEVGGEAYDKHGEPLPEETLESLKKADAILFGAVGGPKWDP   81 (348)
T ss_pred             CceEEEEeCCCCCCHHHHHHHHHHHHHhhhcCCceEEEEehhhHHHHHHcCCCCCHHHHHHHHhCCEEEEcccCCCCCCC
Confidence            56999999999999999999999987654   899999999999999999999999999999999999999999996543


Q ss_pred             HHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccCCcc
Q 015139           85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEK  164 (412)
Q Consensus        85 ~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~~~~  164 (412)
                      .     .++++|++++|||+||||||+||++  ++|++    ++++.          .++|+|+|||||||+|||.++..
T Consensus        82 ~-----~~~~~~~ll~lRk~l~lyANlRP~k--~~~~~----k~~~~----------~~~D~viVREnTeG~Y~G~~~~~  140 (348)
T COG0473          82 L-----PRPERGLLLALRKELDLYANLRPAK--SLPGL----KSPLV----------KGVDIVIVRENTEGLYFGEEGRI  140 (348)
T ss_pred             C-----CCcccchHHHHHHhcCceeeeeecc--cCCCC----CCccC----------CCccEEEEeeCCCccccCCCccc
Confidence            1     1367889999999999999999985  33443    33321          58999999999999999987631


Q ss_pred             cceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcC-CCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccccC
Q 015139          165 TELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAA  242 (412)
Q Consensus       165 ~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~~~  242 (412)
                             ..+ .+++++ ++|||+++|||+|+|||+|++| ++|||+|||+|||+++++|||++|+||+ ++||      
T Consensus       141 -------~~~-~eva~~~~~~Tr~~~eRI~r~AFe~A~~R~~kkvTsv~KaNVl~~s~~lwrev~~eva-~~yP------  205 (348)
T COG0473         141 -------LGG-GEVAIDTKVITRKGSERIARFAFELARKRGRKKVTSVHKANVLKLSDGLWREVVEEVA-KEYP------  205 (348)
T ss_pred             -------cCC-CeEEEEEEeccHHHHHHHHHHHHHHHHhhCCCceEEEehhhhhhhhhHHHHHHHHHHh-hcCC------
Confidence                   011 248999 9999999999999999999999 6899999999999999999999999995 9999      


Q ss_pred             CeEEceeeHHHHHHHHHhCCCcc-EEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEcccccccccccccccc
Q 015139          243 GIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQK  321 (412)
Q Consensus       243 ~I~~~~~~VDa~~~~lv~~P~~F-Vivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~dia  321 (412)
                      +|+++|+|||+++||||++|++| ||||+|||||||||+||+|+|||||+||||+|++..++||||+|||||     |||
T Consensus       206 dv~~~~~~VD~aam~lV~~P~~FDViVt~NlFGDILSD~aa~l~GslGl~PSAnig~~~~~~lfEPvHGSAP-----DIA  280 (348)
T COG0473         206 DVELDHMYVDAAAMQLVRNPEQFDVIVTSNLFGDILSDEAAALTGSLGLAPSANLGDERGPALFEPVHGSAP-----DIA  280 (348)
T ss_pred             CcchhHHhHHHHHHHHhhCccccCEEEEccchhHHHHhHHHHhcCccccCccCccCCCCCCceeecCCCCcc-----ccc
Confidence            99999999999999999999999 999999999999999999999999999999998522699999999999     999


Q ss_pred             CCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHc-CCCCccccccccCCCCCcccccCHHHHHHHH
Q 015139          322 GGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVES-GKMTKDLALIIHGSKMTREHYLNTEEFIDAV  400 (412)
Q Consensus       322 Gk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~-G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV  400 (412)
                      |||| |||+|+|||++|||+|+|+       .++|++|++||+++|++ |++|+|||    |       .++|.||+|+|
T Consensus       281 Gkgi-ANPiA~IlS~aMML~~~g~-------~~~A~~Ie~Av~~vl~~~g~~T~Dlg----g-------~~~T~e~~d~I  341 (348)
T COG0473         281 GKGI-ANPIATILSAAMMLRHLGE-------KEAADAIENAVEKVLAEGGIRTPDLG----G-------NATTSEVGDAI  341 (348)
T ss_pred             CCCc-cChHHHHHHHHHHHHHhCC-------chHHHHHHHHHHHHHHcCCCCCcccC----C-------CccHHHHHHHH
Confidence            9999 9999999999999999873       56999999999999995 69999998    7       68899999999


Q ss_pred             HHHHHH
Q 015139          401 ADDLRA  406 (412)
Q Consensus       401 ~~~l~~  406 (412)
                      +++|..
T Consensus       342 ~~~l~~  347 (348)
T COG0473         342 AKALAS  347 (348)
T ss_pred             HHHHhc
Confidence            999863

>TIGR00127 nadp_idh_euk isocitrate dehydrogenase, NADP-dependent, eukaryotic type Back     alignment and domain information
>PLN03065 isocitrate dehydrogenase (NADP+); Provisional Back     alignment and domain information
>PRK08299 isocitrate dehydrogenase; Validated Back     alignment and domain information
>PTZ00435 isocitrate dehydrogenase; Provisional Back     alignment and domain information
>PLN00103 isocitrate dehydrogenase (NADP+); Provisional Back     alignment and domain information
>PRK08997 isocitrate dehydrogenase; Provisional Back     alignment and domain information
>PLN02329 3-isopropylmalate dehydrogenase Back     alignment and domain information
>PRK08194 tartrate dehydrogenase; Provisional Back     alignment and domain information
>PLN00118 isocitrate dehydrogenase (NAD+) Back     alignment and domain information
>TIGR02089 TTC tartrate dehydrogenase Back     alignment and domain information
>PRK14025 multifunctional 3-isopropylmalate dehydrogenase/D-malate dehydrogenase; Provisional Back     alignment and domain information
>PRK09222 isocitrate dehydrogenase; Validated Back     alignment and domain information
>PRK03437 3-isopropylmalate dehydrogenase; Provisional Back     alignment and domain information
>PRK00772 3-isopropylmalate dehydrogenase; Provisional Back     alignment and domain information
>PLN00123 isocitrate dehydrogenase (NAD+) Back     alignment and domain information
>PRK06451 isocitrate dehydrogenase; Validated Back     alignment and domain information
>TIGR00169 leuB 3-isopropylmalate dehydrogenase Back     alignment and domain information
>TIGR02924 ICDH_alpha isocitrate dehydrogenase Back     alignment and domain information
>TIGR00175 mito_nad_idh isocitrate dehydrogenase, NAD-dependent, mitochondrial type Back     alignment and domain information
>PRK07006 isocitrate dehydrogenase; Reviewed Back     alignment and domain information
>TIGR02088 LEU3_arch isopropylmalate/isohomocitrate dehydrogenases Back     alignment and domain information
>KOG0785 consensus Isocitrate dehydrogenase, alpha subunit [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00183 prok_nadp_idh isocitrate dehydrogenase, NADP-dependent, prokaryotic type Back     alignment and domain information
>PRK07362 isocitrate dehydrogenase; Validated Back     alignment and domain information
>PF00180 Iso_dh: Isocitrate/isopropylmalate dehydrogenase; InterPro: IPR024084 Isocitrate dehydrogenase (IDH) [, ] is an important enzyme of carbohydrate metabolism which catalyses the oxidative decarboxylation of isocitrate into alpha-ketoglutarate Back     alignment and domain information
>PLN00096 isocitrate dehydrogenase (NADP+); Provisional Back     alignment and domain information
>COG0538 Icd Isocitrate dehydrogenases [Energy production and conversion] Back     alignment and domain information
>KOG0784 consensus Isocitrate dehydrogenase, gamma subunit [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0786 consensus 3-isopropylmalate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG1526 consensus NADP-dependent isocitrate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PF03971 IDH: Monomeric isocitrate dehydrogenase; InterPro: IPR004436 This family of enzymes catalyses the NADP(+)-dependent oxidative decarboxylation of isocitrate to form 2-oxoglutarate, CO2, and NADPH within the Krebs cycle (1 Back     alignment and domain information
>TIGR00178 monomer_idh isocitrate dehydrogenase, NADP-dependent, monomeric type Back     alignment and domain information
>PF04166 PdxA: Pyridoxal phosphate biosynthetic protein PdxA; InterPro: IPR005255 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal) Back     alignment and domain information
>PRK03371 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 2; Provisional Back     alignment and domain information
>PRK00232 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK03743 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK01909 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK03946 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK05312 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK02746 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR00557 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase Back     alignment and domain information
>COG1995 PdxA Pyridoxal phosphate biosynthesis protein [Coenzyme metabolism] Back     alignment and domain information
>COG2838 Icd Monomeric isocitrate dehydrogenase [Energy production and conversion] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
1lwd_A413 Crystal Structure Of Nadp-Dependent Isocitrate Dehy 1e-171
2cmj_A410 Crystal Structure Of Mouse Cytosolic Isocitrate Deh 1e-166
1t09_A414 Crystal Structure Of Human Cytosolic Nadp(+)-Depend 1e-165
3mas_B419 Crystal Structure Of Heterodimeric R132h Mutant Of 1e-165
3inm_A425 Crystal Structure Of Human Cytosolic Nadp(+)-Depend 1e-165
3map_A422 Crystal Structure Of Homodimeric R132h Mutant Of Hu 1e-165
3us8_A427 Crystal Structure Of An Isocitrate Dehydrogenase Fr 1e-160
2qfv_A427 Crystal Structure Of Saccharomyces Cerevesiae Mitoc 1e-157
4hcx_A409 Structure Of Icdh-1 From M.tuberculosis Complexed W 1e-156
4aoy_A402 Open Ctidh. The Complex Structures Of Isocitrate De 1e-123
1zor_A399 Isocitrate Dehydrogenase From The Hyperthermophile 1e-120
2uxq_A402 Isocitrate Dehydrogenase From The Psychrophilic Bac 1e-107
3vml_A375 Chimera 3-Isopropylmalate Dehydrogenase Between She 3e-04
>pdb|1LWD|A Chain A, Crystal Structure Of Nadp-Dependent Isocitrate Dehydrogenase From Porcine Heart Mitochondria Length = 413 Back     alignment and structure 
Iteration: 1

 Score =  599 bits (1544), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/407 (70%), Positives = 329/407 (80%), Gaps = 5/407 (1%)
Query: 2   AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVE 61
           A Q+IKVA P+VEMDGDEMTR+ W+ IK+KLI P +++ +KYFDLGLPNRD T+D+VT++
Sbjct: 1   ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTID 60
Query: 62  SAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPR 121
           SA AT KY+VA+KCATITPDEARV+EF LK+MWKSPNGTIRNIL GTVFREPIICKN+PR
Sbjct: 61  SALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPR 120
Query: 122 LIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKT--ELEVYNFTGEGGVA 179
           L+PGWTKPI IGRHA GDQY+ATD V+   G  K+VF  KD  +  + EVYNF   GGV 
Sbjct: 121 LVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDGSSAKQWEVYNFPA-GGVG 179
Query: 180 LSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 239
           + MYNTDESI  FA +    A QKKWPLY+STKNTILK YDGRFKDIFQE++E ++K+ F
Sbjct: 180 MGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDF 239
Query: 240 EAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPD 299
           +   IWYEHRLIDDMVA  LKS GG+VWACKNYDGDVQSD LAQGFGSLGLMTSVLVCPD
Sbjct: 240 DKYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPD 299
Query: 300 GKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKL 359
           GKTIEAEAAHGTVTRHYR HQKG  TSTN IASIFAW+RGL HR KLD N  L+ F + L
Sbjct: 300 GKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTL 359
Query: 360 EAACIGTVESGKMTKDLALIIHGSKMTR--EHYLNTEEFIDAVADDL 404
           E  C+ TVESG MTKDLA  IHG    +  EH+LNT +F+D +  +L
Sbjct: 360 EKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTIKSNL 406
>pdb|2CMJ|A Chain A, Crystal Structure Of Mouse Cytosolic Isocitrate Dehydrogenase Length = 410 Back     alignment and structure
>pdb|1T09|A Chain A, Crystal Structure Of Human Cytosolic Nadp(+)-Dependent Isocitrate Dehydrogenase In Complex Nadp Length = 414 Back     alignment and structure
>pdb|3MAS|B Chain B, Crystal Structure Of Heterodimeric R132h Mutant Of Human Cytosolic Nadp(+)-Dependent Isocitrate Dehydrogenase In Complex With Nadp And Isocitrate Length = 419 Back     alignment and structure
>pdb|3INM|A Chain A, Crystal Structure Of Human Cytosolic Nadp(+)-Dependent Isocitrate Dehydrogenase R132h Mutant In Complex With Nadph, Alpha-Ketoglutarate And Calcium(2+) Length = 425 Back     alignment and structure
>pdb|3MAP|A Chain A, Crystal Structure Of Homodimeric R132h Mutant Of Human Cytosolic Nadp(+)-Dependent Isocitrate Dehydrogenase In Complex With Nadp And Isocitrate Length = 422 Back     alignment and structure
>pdb|3US8|A Chain A, Crystal Structure Of An Isocitrate Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 427 Back     alignment and structure
>pdb|2QFV|A Chain A, Crystal Structure Of Saccharomyces Cerevesiae Mitochondrial Nadp(+)-Dependent Isocitrate Dehydrogenase In Complex With Nadp(+) Length = 427 Back     alignment and structure
>pdb|4HCX|A Chain A, Structure Of Icdh-1 From M.tuberculosis Complexed With Nadph & Mn2+ Length = 409 Back     alignment and structure
>pdb|4AOY|A Chain A, Open Ctidh. The Complex Structures Of Isocitrate Dehydrogenase From Clostridium Thermocellum And Desulfotalea Psychrophila, Support A New Active Site Locking Mechanism Length = 402 Back     alignment and structure
>pdb|1ZOR|A Chain A, Isocitrate Dehydrogenase From The Hyperthermophile Thermotoga Maritima Length = 399 Back     alignment and structure
>pdb|2UXQ|A Chain A, Isocitrate Dehydrogenase From The Psychrophilic Bacterium Desulfotalea Psychrophila: Biochemical Properties And Crystal Structure Analysis Length = 402 Back     alignment and structure
>pdb|3VML|A Chain A, Chimera 3-Isopropylmalate Dehydrogenase Between Shewanella Oneidensis Mr-1 (O) And Shewanella Benthica Db21 Mt-2 (M) From N-Terminal: 20% O Middle 70% M Residual 10% O Length = 375 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
1lwd_A413 Isocitrate dehydrogenase; tricarboxylic acid cycle 0.0
3us8_A427 Isocitrate dehydrogenase [NADP]; PSI-biology, stru 0.0
2qfy_A427 Isocitrate dehydrogenase [NADP]; rossmann fold, ox 0.0
2uxq_A402 Isocitrate dehydrogenase native; psychrophilic, co 0.0
4aoy_A402 Isocitrate dehydrogenase [NADP]; oxidoreductase, t 0.0
1zor_A399 Isocitrate dehydrogenase; wild type enzyme, CIS-pr 0.0
1itw_A741 Isocitrate dehydrogenase; greece KEY motif, oxidor 2e-20
2b0t_A738 NADP isocitrate dehydrogenase; monomeric, IDH, oxi 1e-19
2b0t_A 738 NADP isocitrate dehydrogenase; monomeric, IDH, oxi 2e-05
1hqs_A423 Isocitrate dehydrogenase; glyoxylate bypass, bsidh 4e-11
3dms_A427 Isocitrate dehydrogenase [NADP]; struc genomics, s 1e-10
1wpw_A336 3-isopropylmalate dehydrogenase; oxidoreductase; 2 2e-10
2iv0_A412 Isocitrate dehydrogenase; oxidoreductase, tricarbo 6e-10
3blx_A349 Isocitrate dehydrogenase [NAD] subunit 1; TCA cycl 1e-09
1tyo_A435 Isocitrate dehydrogenase; enzyme-ethenonadp comple 1e-09
2d1c_A 496 Isocitrate dehydrogenase; structural genomics, NPP 4e-09
2e0c_A409 409AA long hypothetical NADP-dependent isocitrate 9e-09
2d4v_A429 Isocitrate dehydrogenase; alpha and beta protein, 2e-08
1x0l_A333 Homoisocitrate dehydrogenase; oxidoreductase, deca 3e-08
3blx_B354 Isocitrate dehydrogenase [NAD] subunit 2; TCA cycl 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
3ty4_A366 Probable homoisocitrate dehydrogenase; B-hydroxyac 1e-05
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A* Length = 413 Back     alignment and structure
 Score =  571 bits (1473), Expect = 0.0
 Identities = 286/414 (69%), Positives = 329/414 (79%), Gaps = 5/414 (1%)

Query: 2   AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVE 61
           A Q+IKVA P+VEMDGDEMTR+ W+ IK+KLI P +++ +KYFDLGLPNRD T+D+VT++
Sbjct: 1   ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTID 60

Query: 62  SAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPR 121
           SA AT KY+VA+KCATITPDEARV+EF LK+MWKSPNGTIRNIL GTVFREPIICKN+PR
Sbjct: 61  SALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPR 120

Query: 122 LIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKD--EKTELEVYNFTGEGGVA 179
           L+PGWTKPI IGRHA GDQY+ATD V+   G  K+VF  KD     + EVYNF   GGV 
Sbjct: 121 LVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDGSSAKQWEVYNFPA-GGVG 179

Query: 180 LSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 239
           + MYNTDESI  FA +    A QKKWPLY+STKNTILK YDGRFKDIFQE++E ++K+ F
Sbjct: 180 MGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDF 239

Query: 240 EAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPD 299
           +   IWYEHRLIDDMVA  LKS GG+VWACKNYDGDVQSD LAQGFGSLGLMTSVLVCPD
Sbjct: 240 DKYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPD 299

Query: 300 GKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKL 359
           GKTIEAEAAHGTVTRHYR HQKG  TSTN IASIFAW+RGL HR KLD N  L+ F + L
Sbjct: 300 GKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTL 359

Query: 360 EAACIGTVESGKMTKDLALIIHGSKMT--REHYLNTEEFIDAVADDLRARLSGK 411
           E  C+ TVESG MTKDLA  IHG       EH+LNT +F+D +  +L   L  +
Sbjct: 360 EKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTIKSNLDRALGRQ 413
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti} Length = 427 Back     alignment and structure
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A* Length = 427 Back     alignment and structure
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A* Length = 402 Back     alignment and structure
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A Length = 402 Back     alignment and structure
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima} Length = 399 Back     alignment and structure
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A* Length = 741 Back     alignment and structure
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A* Length = 738 Back     alignment and structure
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A* Length = 738 Back     alignment and structure
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1 Length = 423 Back     alignment and structure
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A 8icd_A* 6icd_A ... Length = 427 Back     alignment and structure
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1 Length = 336 Back     alignment and structure
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus} Length = 412 Back     alignment and structure
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A* Length = 349 Back     alignment and structure
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A* Length = 435 Back     alignment and structure
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus} Length = 496 Back     alignment and structure
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A* Length = 409 Back     alignment and structure
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans} Length = 429 Back     alignment and structure
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A Length = 333 Back     alignment and structure
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B Length = 354 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} PDB: 3ty3_A Length = 366 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query412
3us8_A427 Isocitrate dehydrogenase [NADP]; PSI-biology, stru 100.0
1lwd_A413 Isocitrate dehydrogenase; tricarboxylic acid cycle 100.0
2qfy_A427 Isocitrate dehydrogenase [NADP]; rossmann fold, ox 100.0
1zor_A399 Isocitrate dehydrogenase; wild type enzyme, CIS-pr 100.0
2uxq_A402 Isocitrate dehydrogenase native; psychrophilic, co 100.0
4aoy_A402 Isocitrate dehydrogenase [NADP]; oxidoreductase, t 100.0
1x0l_A333 Homoisocitrate dehydrogenase; oxidoreductase, deca 100.0
3flk_A364 Tartrate dehydrogenase/decarboxylase; cytoplasm, l 100.0
3u1h_A390 3-isopropylmalate dehydrogenase; oxidored; 2.80A { 100.0
3udu_A361 3-isopropylmalate dehydrogenase; structural genomi 100.0
2y3z_A359 3-isopropylmalate dehydrogenase; oxidoreductase, L 100.0
3ty4_A366 Probable homoisocitrate dehydrogenase; B-hydroxyac 100.0
3vmk_A375 3-isopropylmalate dehydrogenase; oxidoreductase, d 100.0
3r8w_A405 3-isopropylmalate dehydrogenase 2, chloroplastic; 100.0
3dms_A427 Isocitrate dehydrogenase [NADP]; struc genomics, s 100.0
1cnz_A363 IPMDH, IMDH, protein (3-isopropylmalate dehydrogen 100.0
1wpw_A336 3-isopropylmalate dehydrogenase; oxidoreductase; 2 100.0
3blx_B354 Isocitrate dehydrogenase [NAD] subunit 2; TCA cycl 100.0
2e0c_A409 409AA long hypothetical NADP-dependent isocitrate 100.0
1a05_A358 IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxid 100.0
1vlc_A366 3-isopropylmalate dehydrogenase; TM0556, structura 100.0
2d1c_A 496 Isocitrate dehydrogenase; structural genomics, NPP 100.0
2iv0_A412 Isocitrate dehydrogenase; oxidoreductase, tricarbo 100.0
3blx_A349 Isocitrate dehydrogenase [NAD] subunit 1; TCA cycl 100.0
2d4v_A429 Isocitrate dehydrogenase; alpha and beta protein, 100.0
1tyo_A435 Isocitrate dehydrogenase; enzyme-ethenonadp comple 100.0
1hqs_A423 Isocitrate dehydrogenase; glyoxylate bypass, bsidh 100.0
1w0d_A337 3-isopropylmalate dehydrogenase; oxidoreductase, l 100.0
1itw_A741 Isocitrate dehydrogenase; greece KEY motif, oxidor 96.2
2b0t_A738 NADP isocitrate dehydrogenase; monomeric, IDH, oxi 96.11
1yxo_A328 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA 93.26
2hi1_A330 4-hydroxythreonine-4-phosphate dehydrogenase 2; py 93.21
3lxy_A334 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA 93.12
4aty_A349 Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; o 92.93
3tsn_A367 4-hydroxythreonine-4-phosphate dehydrogenase; stru 91.65
4aoy_A402 Isocitrate dehydrogenase [NADP]; oxidoreductase, t 88.81
3us8_A427 Isocitrate dehydrogenase [NADP]; PSI-biology, stru 81.23
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti} Back     alignment and structure
Probab=100.00  E-value=1.4e-115  Score=893.87  Aligned_cols=403  Identities=69%  Similarity=1.132  Sum_probs=363.2

Q ss_pred             CccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCC
Q 015139            2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD   81 (412)
Q Consensus         2 ~~~~~~m~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~   81 (412)
                      .|+||||+++|++|||||||||||+++++||.+++++|+|+++++|++++++||+++|++++++|++++++||||++||.
T Consensus        23 ~~~~i~~~~~I~vipGDGIGpEI~~~~~~vL~~~~~~i~~~~~~~G~~~~~~tg~~lp~etl~aik~~da~LkGav~tP~  102 (427)
T 3us8_A           23 MMAKIKVANPVVELDGDEMTRIIWQFIKDKLIHPYLDLDLEYYDLGVENRDATDDQVTIDAANAIKKHGVGVKCATITPD  102 (427)
T ss_dssp             --CCEECCSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred             ccccccccceEEEEcCCcccHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCC
Confidence            58999999999999999999999999999999899999999999999999999999999999999999999999999998


Q ss_pred             chhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeecc-
Q 015139           82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEG-  160 (412)
Q Consensus        82 ~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~-  160 (412)
                      +.+++|+.+.++|+|+|++|||+||||+|+||+.++++|++.++++.|++|+||||||.|.++|+.++||+++++||.. 
T Consensus       103 ~~~~~e~~l~~~~~s~n~~LRk~LdlyanvRPv~~~~ip~~~~~~~~DivIvREnteg~Y~g~e~~~~~~~~~~l~~~~~  182 (427)
T 3us8_A          103 EGRVEEFKLKKMWKSPNGTIRNILGGVIFREPIICKNVPRLVPGWTKPIIVGRHAFGDQYRATDFKFPGKGKLSIKFVGE  182 (427)
T ss_dssp             HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred             ccccccccccccccCchHHHHHHhCCeEEecceeccCCCCCCCCCCCCEEEEEeCCCCccCCceeEEecCCcceeeeecc
Confidence            7766777777789999999999999999999997788998888888999999999999999999999999999999832 


Q ss_pred             CCcccceeeccccCCCceEEEeeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCCccc
Q 015139          161 KDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE  240 (412)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~a~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~~~~  240 (412)
                      .+.+.+..++++.+ .+++...+||++++|||+|+||+||++|++|||+|||+|||+.|||+||++|+||++++||++|+
T Consensus       183 ~G~~~~~~~~~~~~-~~va~~~~~T~~~~eRiar~AFe~A~~r~kkVt~v~KaNIlk~tdglfr~~~~eva~~eYp~~~~  261 (427)
T 3us8_A          183 DGQTIEHDVYDAPG-AGVALAMYNLDESITEFARASFNYGLQRKVPVYLSTKNTILKAYDGRFKDIFQKVFDEEFAAQFK  261 (427)
T ss_dssp             TSCEEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHH
T ss_pred             ccccccccccccCC-CcEEEEEeeCHHHHHHHHHHHHHHHHHcCCcEEEEECcccchhhhhHHHHHHHHHHHHhCccccC
Confidence            12222233334443 56775588899999999999999999999999999999999999999999999996449998888


Q ss_pred             cCCeEEceeeHHHHHHHHHhCCCccEEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEccccccccccccccc
Q 015139          241 AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQ  320 (412)
Q Consensus       241 ~~~I~~~~~~VDa~~~~lv~~P~~FVivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~~di  320 (412)
                      +++|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++.++||||+|||||+||++||
T Consensus       262 ~~~I~~~~~~VD~~~mqlv~~P~~FVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~~~a~fEp~HGSAPd~~~~~i  341 (427)
T 3us8_A          262 AEKLWYEHRLIDDMVASALKWSGGYVWACKNYDGDVQSDIVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYRQHQ  341 (427)
T ss_dssp             HTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHSCTTSEEEEEECTTSCCEEEECCSCCCHHHHHHHH
T ss_pred             CCCeEEEEEEHHHHHHHHhhCCCCcEEEeCCcCCcHHHHHHHHhcCChhhCceeEECCCCCeEEEeCCCCCcCCccchhc
Confidence            88999999999999999999999999999999999999999999999999999999988634999999999998888889


Q ss_pred             cCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCCCcccccCHHHHHHHH
Q 015139          321 KGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAV  400 (412)
Q Consensus       321 aGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV  400 (412)
                      ||||++|||+|+|||++|||+|+|++++++.+.++|++|++||.+|+++|++|+|||..++ .   ..+.++|+||+|+|
T Consensus       342 AGk~i~ANP~A~IlS~ammL~hlG~~~~~~~l~~~A~~Ie~Av~~~l~~g~~T~Dlgg~~~-~---~~~~~~T~e~~daV  417 (427)
T 3us8_A          342 KGEETSTNSIASIFAWTRGLAHRAKLDGNAELAKFSETLERVCVDTVESGFMTKDLALLIG-P---DQPWLSTTGFLDKI  417 (427)
T ss_dssp             TTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCBHHHHHHHC-T---TCCCBCHHHHHHHH
T ss_pred             CCCCceeCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCCcCcccccccc-c---CCcccCHHHHHHHH
Confidence            9999889999999999999999998877777789999999999999999999999983110 0   12369999999999


Q ss_pred             HHHHHHHhc
Q 015139          401 ADDLRARLS  409 (412)
Q Consensus       401 ~~~l~~~~~  409 (412)
                      +++|++.|.
T Consensus       418 ~~~l~~~l~  426 (427)
T 3us8_A          418 DENLRKAMA  426 (427)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHHhc
Confidence            999998874
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A* Back     alignment and structure
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A* Back     alignment and structure
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima} Back     alignment and structure
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A* Back     alignment and structure
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A Back     alignment and structure
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A Back     alignment and structure
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X* Back     alignment and structure
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A Back     alignment and structure
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A Back     alignment and structure
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A Back     alignment and structure
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} SCOP: c.77.1.0 PDB: 3ty3_A Back     alignment and structure
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A* Back     alignment and structure
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana} Back     alignment and structure
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} SCOP: c.77.1.1 PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4aj3_A* 4aja_A* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A ... Back     alignment and structure
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A Back     alignment and structure
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1 Back     alignment and structure
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B Back     alignment and structure
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A* Back     alignment and structure
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1 Back     alignment and structure
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1 Back     alignment and structure
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus} Back     alignment and structure
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus} Back     alignment and structure
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A* Back     alignment and structure
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans} Back     alignment and structure
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A* Back     alignment and structure
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1 Back     alignment and structure
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A Back     alignment and structure
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A* Back     alignment and structure
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A* Back     alignment and structure
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa} Back     alignment and structure
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium} Back     alignment and structure
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A Back     alignment and structure
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400} Back     alignment and structure
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp} Back     alignment and structure
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A Back     alignment and structure
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 412
d1lwda_413 c.77.1.1 (A:) NADP-dependent isocitrate dehydrogen 1e-136
d1t0la_414 c.77.1.1 (A:) NADP-dependent isocitrate dehydrogen 1e-135
d1hqsa_423 c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Baci 7e-45
d1pb1a_416 c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Esch 8e-40
d1cnza_363 c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPM 2e-34
d1a05a_357 c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPM 4e-31
d1vlca_362 c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPM 2e-29
d1v53a1356 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase 1e-28
d1itwa_740 c.77.1.2 (A:) Monomeric isocitrate dehydrogenase { 5e-27
d1wpwa_336 c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPM 3e-25
d1g2ua_345 c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPM 2e-14
>d1lwda_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 413 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: Dimeric isocitrate & isopropylmalate dehydrogenases
domain: NADP-dependent isocitrate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  394 bits (1013), Expect = e-136
 Identities = 281/410 (68%), Positives = 325/410 (79%), Gaps = 3/410 (0%)

Query: 2   AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVE 61
           A Q+IKVA P+VEMDGDEMTR+ W+ IK+KLI P +++ +KYFDLGLPNRD T+D+VT++
Sbjct: 1   ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTID 60

Query: 62  SAEATLKYNVAIKCATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPR 121
           SA AT KY+VA+KCATITPDEARV+EF LK+MWKSPNGTIRNIL GTVFREPIICKN+PR
Sbjct: 61  SALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPR 120

Query: 122 LIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGKDEKTELEVYNFT-GEGGVAL 180
           L+PGWTKPI IGRHA GDQY+ATD V+   G  K+VF  KD  +  +   +    GGV +
Sbjct: 121 LVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDGSSAKQWEVYNFPAGGVGM 180

Query: 181 SMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 240
            MYNTDESI  FA +    A QKKWPLY+STKNTILK YDGRFKDIFQE++E ++K+ F+
Sbjct: 181 GMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFD 240

Query: 241 AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDG 300
              IWYEHRLIDDMVA  LKS GG+VWACKNYDGDVQSD LAQGFGSLGLMTSVLVCPDG
Sbjct: 241 KYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDG 300

Query: 301 KTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLE 360
           KTIEAEAAHGTVTRHYR HQKG  TSTN IASIFAW+RGL HR KLD N  L+ F + LE
Sbjct: 301 KTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLE 360

Query: 361 AACIGTVESGKMTKDLALIIHGSKMT--REHYLNTEEFIDAVADDLRARL 408
             C+ TVESG MTKDLA  IHG       EH+LNT +F+D +  +L   L
Sbjct: 361 KVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTIKSNLDRAL 410
>d1t0la_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 414 Back     information, alignment and structure
>d1hqsa_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Bacillus subtilis [TaxId: 1423]} Length = 423 Back     information, alignment and structure
>d1pb1a_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Escherichia coli [TaxId: 562]} Length = 416 Back     information, alignment and structure
>d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Salmonella typhimurium [TaxId: 90371]} Length = 363 Back     information, alignment and structure
>d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thiobacillus ferrooxidans [TaxId: 920]} Length = 357 Back     information, alignment and structure
>d1vlca_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga maritima [TaxId: 2336]} Length = 362 Back     information, alignment and structure
>d1v53a1 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase, IPMDH {Bacillus coagulans [TaxId: 1398]} Length = 356 Back     information, alignment and structure
>d1itwa_ c.77.1.2 (A:) Monomeric isocitrate dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Length = 740 Back     information, alignment and structure
>d1wpwa_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Sulfolobus tokodaii [TaxId: 111955]} Length = 336 Back     information, alignment and structure
>d1g2ua_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermus thermophilus [TaxId: 274]} Length = 345 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query412
d1lwda_413 NADP-dependent isocitrate dehydrogenase {Pig (Sus 100.0
d1cnza_363 3-isopropylmalate dehydrogenase, IPMDH {Salmonella 100.0
d1vlca_362 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga 100.0
d1v53a1356 3-isopropylmalate dehydrogenase, IPMDH {Bacillus c 100.0
d1hqsa_423 Isocitrate dehydrogenase, ICDH {Bacillus subtilis 100.0
d1wpwa_336 3-isopropylmalate dehydrogenase, IPMDH {Sulfolobus 100.0
d1a05a_357 3-isopropylmalate dehydrogenase, IPMDH {Thiobacill 100.0
d1w0da_337 3-isopropylmalate dehydrogenase, IPMDH {Mycobacter 100.0
d1pb1a_416 Isocitrate dehydrogenase, ICDH {Escherichia coli [ 100.0
d1g2ua_345 3-isopropylmalate dehydrogenase, IPMDH {Thermus th 100.0
d1t0la_414 NADP-dependent isocitrate dehydrogenase {Human (Ho 100.0
d1itwa_740 Monomeric isocitrate dehydrogenase {Azotobacter vi 98.61
d1ptma_329 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 95.47
d1t0la_414 NADP-dependent isocitrate dehydrogenase {Human (Ho 92.46
>d1lwda_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Isocitrate/Isopropylmalate dehydrogenase-like
superfamily: Isocitrate/Isopropylmalate dehydrogenase-like
family: Dimeric isocitrate & isopropylmalate dehydrogenases
domain: NADP-dependent isocitrate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=4.7e-100  Score=777.28  Aligned_cols=406  Identities=68%  Similarity=1.109  Sum_probs=351.5

Q ss_pred             CccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeEecccCCCC
Q 015139            2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD   81 (412)
Q Consensus         2 ~~~~~~m~~~I~vi~GDGiGpEv~~~~~~vl~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~~p~   81 (412)
                      |.+||+|++||++|||||||+++|+.+++.|+.++++|+|+++++|++++++||+++|+|+++++++++++||||++||.
T Consensus         1 ~~~ki~v~~pIv~l~GDeit~~~~~~i~~~l~~~~~di~~~~~d~G~~~~~~tg~~l~~eaiea~k~~~aiLkGa~~tP~   80 (413)
T d1lwda_           1 ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPD   80 (413)
T ss_dssp             CCCCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred             CCCcccccCCEEEecCccHHHHHHHHHHHHHccCCCCceEEEEeCCHHHHHHhCCcCcHHHHHHHHHcCEEEECCcCCCC
Confidence            57999999999999999999999999999888889999999999999999999999999999999999999999999998


Q ss_pred             chhHHHHHhhhcCCCccHHHHhhcCceEEeeeeeeccCCCCCCCCCCceeecccccCCccCCccEEEecCCccceeeccC
Q 015139           82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFEGK  161 (412)
Q Consensus        82 ~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~p~l~~~~~~~l~i~Re~~~~~y~~id~vivrenteg~y~g~~  161 (412)
                      ...+++..+.+.++|+|+.||++||||+|+||+++.+.++..++++.|++++||||||.|.++++.+.++.+..+++...
T Consensus        81 ~~~~~~~~~~~~~~s~n~~lR~~ldl~an~RP~~~~~~~~~~~~~~~d~VivREnteg~Y~g~e~~~~~~~~~~i~~~~~  160 (413)
T d1lwda_          81 EARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPK  160 (413)
T ss_dssp             HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred             ccccccccccccccchhhhHHHhcCCceEEecccccCCCCcCCCCCCCeEEeeccccceeeccceeccCcccceeEEecc
Confidence            66555555566789999999999999999999988655566666788999999999999999999999988888876322


Q ss_pred             C--cccceeeccccCCCceEEE-eeeCHHHHHHHHHHHHHHHHcCCCCEEEEeCCCccccccHHHHHHHHHHHHhhcCC-
Q 015139          162 D--EKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKS-  237 (412)
Q Consensus       162 ~--~~~~~~~~~~~~~~~~a~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~ev~a~~yp~-  237 (412)
                      .  ........++.  ...+.. .++|+.+++||+++||++|++|+++||++||+|||+.|+|||+++|+|| +++||+ 
T Consensus       161 ~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ria~~af~~a~~~~~~vt~v~K~nvl~~~~glf~~~~~ev-a~~~p~~  237 (413)
T d1lwda_         161 DGSSAKQWEVYNFP--AGGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEI-FEKHYKT  237 (413)
T ss_dssp             TCCCCEEEEEEEES--SCEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHH-HHHHTHH
T ss_pred             cccccccccccccc--ccccceeeccccchhhHHHHHHHHHHHhcCcceEEecccceeeehhHHHHHHHHHH-HHHhccc
Confidence            1  11111111111  344555 8899999999999999999999999999999999999999999999999 577774 


Q ss_pred             ccccCCeEEceeeHHHHHHHHHhCCCccEEEecCcccccccchhhhhcCCcccccceeeCCCCceEEEcccccccccccc
Q 015139          238 KFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR  317 (412)
Q Consensus       238 ~~~~~~I~~~~~~VDa~~~~lv~~P~~FVivt~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAp~~~~  317 (412)
                      ++...+|+++++++|+++|+|+++|+.|||||+|||||||||++|+++|||||+||+|+|+++...+|||+|||||+|+.
T Consensus       238 ~~~~~~I~~~~~~vd~~~~~lv~~p~~~Vivt~NlfGDIlSDlaa~l~GglGl~pSanig~~~~~~~fe~~HGsap~~ag  317 (413)
T d1lwda_         238 DFDKYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR  317 (413)
T ss_dssp             HHHHTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHH
T ss_pred             cccccEEEEehhhhhhhhhhhcCCCCCeEEEEccccchhHhhHHHHhcCCCCCCcccccCCCccccccccccccchhhcc
Confidence            34455799999999999999999999779999999999999999999999999999999988545789999999998877


Q ss_pred             c-cccCCCcccChhhHHHHHHHHHHhhcccCCccchHHHHHHHHHHHHHHHHcCCCCccccccccCCCC--CcccccCHH
Q 015139          318 V-HQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKM--TREHYLNTE  394 (412)
Q Consensus       318 ~-diaGk~i~ANP~a~IlS~ammL~~lg~l~~~~~l~~~A~~i~~Av~~~l~~G~~T~Dlg~~~~G~~~--~~~~~~sT~  394 (412)
                      . ||+|||+ |||+|||||++|||+|||+.+.+..+.++|++|++||.+|+++|++|+|||+...|...  ...+.+||+
T Consensus       318 ~~~iagk~i-ANP~a~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~DlgG~~~~~~~~~~~~~~~sT~  396 (413)
T d1lwda_         318 EHQKGRPTS-TNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTS  396 (413)
T ss_dssp             HHHTTCCCC-CCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHH
T ss_pred             hhhcCCccc-cChHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHCCCCCcccCCCccccccccccCCccCHH
Confidence            5 8888999 99999999999999999987766678899999999999999999999999832212100  012347999


Q ss_pred             HHHHHHHHHHHHHhccC
Q 015139          395 EFIDAVADDLRARLSGK  411 (412)
Q Consensus       395 e~~daV~~~l~~~~~~~  411 (412)
                      ||+|+|+++|+++|.++
T Consensus       397 ef~daV~~~L~~~l~~~  413 (413)
T d1lwda_         397 DFLDTIKSNLDRALGRQ  413 (413)
T ss_dssp             HHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHccC
Confidence            99999999999999864
>d1cnza_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1vlca_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1v53a1 c.77.1.1 (A:1-356) 3-isopropylmalate dehydrogenase, IPMDH {Bacillus coagulans [TaxId: 1398]} Back     information, alignment and structure
>d1hqsa_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1wpwa_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1a05a_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thiobacillus ferrooxidans [TaxId: 920]} Back     information, alignment and structure
>d1w0da_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1pb1a_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g2ua_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1t0la_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1itwa_ c.77.1.2 (A:) Monomeric isocitrate dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1ptma_ c.77.1.3 (A:) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1t0la_ c.77.1.1 (A:) NADP-dependent isocitrate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure