Citrus Sinensis ID: 015141
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 412 | ||||||
| 296089117 | 681 | unnamed protein product [Vitis vinifera] | 0.953 | 0.577 | 0.775 | 1e-174 | |
| 359489396 | 654 | PREDICTED: alpha-1,4-galacturonosyltrans | 0.953 | 0.600 | 0.775 | 1e-174 | |
| 317106631 | 693 | JHL05D22.8 [Jatropha curcas] | 0.958 | 0.569 | 0.778 | 1e-174 | |
| 224130070 | 687 | glycosyltransferase [Populus trichocarpa | 0.958 | 0.574 | 0.743 | 1e-161 | |
| 255541398 | 710 | transferase, transferring glycosyl group | 0.888 | 0.515 | 0.675 | 1e-149 | |
| 15233046 | 673 | alpha-1,4-galacturonosyltransferase 1 [A | 0.936 | 0.573 | 0.691 | 1e-148 | |
| 14517362 | 639 | AT3g61130/T20K12_30 [Arabidopsis thalian | 0.936 | 0.604 | 0.691 | 1e-148 | |
| 297817422 | 673 | GAUT1/LGT1 [Arabidopsis lyrata subsp. ly | 0.939 | 0.575 | 0.683 | 1e-148 | |
| 449454500 | 679 | PREDICTED: polygalacturonate 4-alpha-gal | 0.946 | 0.574 | 0.703 | 1e-147 | |
| 449530604 | 679 | PREDICTED: LOW QUALITY PROTEIN: polygala | 0.946 | 0.574 | 0.701 | 1e-147 |
| >gi|296089117|emb|CBI38820.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 308/397 (77%), Positives = 343/397 (86%), Gaps = 4/397 (1%)
Query: 1 MASGRGLSGMGIHRKRGGGSRLPIVLVIFFSVLAPLIFFVGRGLYTSASIDQNDIPSGSS 60
MA RGLSG + R R SRLP+ +VI S+LAPLIFFVGRG+YT ID D+ S SS
Sbjct: 1 MALRRGLSGAALQRNRPSRSRLPLAVVISLSLLAPLIFFVGRGIYT---IDHTDVTSSSS 57
Query: 61 KQNVHWRERLALRYIKSLLSKDVIDVIAASTVDLGPLSLDSLRKSNMSASWKFVGAETSV 120
KQ+V WRERLAL++IKSLLSK+VID+I A+T DLGP SLD RKSN+SASWK VG TSV
Sbjct: 58 KQDVDWRERLALQHIKSLLSKEVIDIITATTDDLGPFSLDYFRKSNLSASWKVVGLGTSV 117
Query: 121 ENNATS-EPNQKAVRIEKEAPKGKGDNILADGHSQLVDTPAKQFRRQLRERRREKRAADL 179
ENN +S EPNQ +++E P GK D HSQ +D+PAK RRQLRE+RR+KRAADL
Sbjct: 118 ENNTSSLEPNQMGPAVKQERPGGKQDKYSGGDHSQFIDSPAKLVRRQLREKRRDKRAADL 177
Query: 180 VQQDDEAIVKLENAAIERSKSVDSAVLGKYSIWRKENENDNSDSTVRLMRDQMIMARVYL 239
V+QDDEA VKLENAAIERSKSVDSAVLGKYSIWRKEN+N+N+DSTVRLMRDQMIMARVY
Sbjct: 178 VRQDDEATVKLENAAIERSKSVDSAVLGKYSIWRKENDNENTDSTVRLMRDQMIMARVYA 237
Query: 240 SIAKMKNKPDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLYDC 299
SIAKMKNK DLQQEL +RLKESQR+LG+ +AD+DLHHS PEKIK MGQVLSKA+EQLYDC
Sbjct: 238 SIAKMKNKLDLQQELLARLKESQRSLGEASADSDLHHSAPEKIKAMGQVLSKAKEQLYDC 297
Query: 300 KLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLLPPEKRK 359
KLVTGKLRAMLQ+ADEQVRSLKKQSTFLSQLAAKTIPNGIHC+SMRLTIEYYLLPPEKR+
Sbjct: 298 KLVTGKLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIEYYLLPPEKRR 357
Query: 360 FPGSENLENPNLYHYALFSDNVLAASVVVNSTIMNAK 396
FP SENLENPNLYHYALFSDNVLAASVVVNSTI+NAK
Sbjct: 358 FPRSENLENPNLYHYALFSDNVLAASVVVNSTILNAK 394
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359489396|ref|XP_002272447.2| PREDICTED: alpha-1,4-galacturonosyltransferase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|317106631|dbj|BAJ53137.1| JHL05D22.8 [Jatropha curcas] | Back alignment and taxonomy information |
|---|
| >gi|224130070|ref|XP_002320745.1| glycosyltransferase [Populus trichocarpa] gi|222861518|gb|EEE99060.1| glycosyltransferase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255541398|ref|XP_002511763.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223548943|gb|EEF50432.1| transferase, transferring glycosyl groups, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|15233046|ref|NP_191672.1| alpha-1,4-galacturonosyltransferase 1 [Arabidopsis thaliana] gi|75173891|sp|Q9LE59.1|GAUT1_ARATH RecName: Full=Polygalacturonate 4-alpha-galacturonosyltransferase; AltName: Full=Alpha-1,4-galacturonosyltransferase 1; AltName: Full=Galacturonosyltransferase 1; AltName: Full=Like glycosyl transferase 1 gi|6850880|emb|CAB71043.1| putative protein [Arabidopsis thaliana] gi|7799777|emb|CAB91508.1| like glycosyl transferase 1 [Arabidopsis thaliana] gi|86611465|gb|ABD14404.1| homogalacturonan alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi|332646638|gb|AEE80159.1| alpha-1,4-galacturonosyltransferase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|14517362|gb|AAK62572.1| AT3g61130/T20K12_30 [Arabidopsis thaliana] gi|23308453|gb|AAN18196.1| At3g61130/T20K12_30 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297817422|ref|XP_002876594.1| GAUT1/LGT1 [Arabidopsis lyrata subsp. lyrata] gi|297322432|gb|EFH52853.1| GAUT1/LGT1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|449454500|ref|XP_004144992.1| PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase-like [Cucumis sativus] gi|449473828|ref|XP_004153994.1| PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449530604|ref|XP_004172284.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonate 4-alpha-galacturonosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 412 | ||||||
| TAIR|locus:2098836 | 673 | GAUT1 "galacturonosyltransfera | 0.936 | 0.573 | 0.664 | 2.2e-128 | |
| TAIR|locus:2039934 | 528 | GAUT2 "galacturonosyltransfera | 0.611 | 0.477 | 0.482 | 2.8e-57 | |
| TAIR|locus:2121753 | 680 | GAUT3 "galacturonosyltransfera | 0.803 | 0.486 | 0.365 | 2.7e-52 | |
| TAIR|locus:2160957 | 616 | GAUT4 "galacturonosyltransfera | 0.424 | 0.284 | 0.548 | 3.4e-45 | |
| TAIR|locus:504955915 | 610 | LGT5 "los glycosyltransferase | 0.424 | 0.286 | 0.460 | 1.3e-40 | |
| TAIR|locus:2064163 | 619 | GAUT7 "AT2G38650" [Arabidopsis | 0.456 | 0.303 | 0.397 | 1e-38 | |
| TAIR|locus:2090210 | 559 | QUA1 "QUASIMODO 1" [Arabidopsi | 0.405 | 0.298 | 0.394 | 1.9e-24 | |
| TAIR|locus:2027453 | 537 | GAUT11 "galacturonosyltransfer | 0.429 | 0.329 | 0.317 | 4.3e-18 | |
| TAIR|locus:2074572 | 561 | GAUT9 "galacturonosyltransfera | 0.361 | 0.265 | 0.359 | 6.3e-18 | |
| TAIR|locus:2051426 | 536 | GAUT10 "galacturonosyltransfer | 0.422 | 0.324 | 0.316 | 9.8e-18 |
| TAIR|locus:2098836 GAUT1 "galacturonosyltransferase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1260 (448.6 bits), Expect = 2.2e-128, P = 2.2e-128
Identities = 265/399 (66%), Positives = 308/399 (77%)
Query: 1 MASGRGLSGMGIHRKRGGGSRLPIVLVIFFSVLAPLIFFVGRGLYTSASIDQNDIPSGSS 60
MA RGLSG+ R GGGSR +VL+IFF V APL FFVGRG+Y +S ND S
Sbjct: 1 MALKRGLSGVNRIRGSGGGSRSVLVLLIFFCVFAPLCFFVGRGVYIDSS---NDYSIVSV 57
Query: 61 KQNVHWRERLALRYIKSLLSKDVIDVIAASTVDLGPLSLDSLRKSNMSASWKFVGAETSV 120
KQN+ WRERLA++ ++SL SK+++DVIA ST DLGPLSLDS +K+N+SASW+ G + S
Sbjct: 58 KQNLDWRERLAMQSVRSLFSKEILDVIATSTADLGPLSLDSFKKNNLSASWRGTGVDPSF 117
Query: 121 ---ENNATSEPNQKAVRIEKEAPKGKGDNILADGHSQLVDTPAXXXXXXXXXXXXXXXAA 177
EN AT P+ K+ + + K D+I D Q V+TP A
Sbjct: 118 RHSENPAT--PDVKSNNLNE-----KRDSISKDSIHQKVETPTKIHRRQLREKRREMRAN 170
Query: 178 DLVQQDDEAIVKLENAAIERSKSVDSAVLGKYSIWRKENENDNSDSTVRLMRDQMIMARV 237
+LVQ +D+ I+KLENAAIERSKSVDSAVLGKYSIWR+ENENDNSDS +RLMRDQ+IMARV
Sbjct: 171 ELVQHNDDTILKLENAAIERSKSVDSAVLGKYSIWRRENENDNSDSNIRLMRDQVIMARV 230
Query: 238 YLSIAKMKNKPDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLY 297
Y IAK+KNK DL QELQ+RLK+SQR LG+ +DADL S EK++ MGQVL+KA+ QLY
Sbjct: 231 YSGIAKLKNKNDLLQELQARLKDSQRVLGEATSDADLPRSAHEKLRAMGQVLAKAKMQLY 290
Query: 298 DCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLLPPEK 357
DCKLVTGKLRAMLQTADEQVRSLKKQSTFL+QLAAKTIPN IHC+SMRLTI+YYLL PEK
Sbjct: 291 DCKLVTGKLRAMLQTADEQVRSLKKQSTFLAQLAAKTIPNPIHCLSMRLTIDYYLLSPEK 350
Query: 358 RKFPGSENLENPNLYHYALFSDNVLAASVVVNSTIMNAK 396
RKFP SENLENPNLYHYALFSDNVLAASVVVNSTIMNAK
Sbjct: 351 RKFPRSENLENPNLYHYALFSDNVLAASVVVNSTIMNAK 389
|
|
| TAIR|locus:2039934 GAUT2 "galacturonosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2121753 GAUT3 "galacturonosyltransferase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2160957 GAUT4 "galacturonosyltransferase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:504955915 LGT5 "los glycosyltransferase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2064163 GAUT7 "AT2G38650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2090210 QUA1 "QUASIMODO 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2027453 GAUT11 "galacturonosyltransferase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2074572 GAUT9 "galacturonosyltransferase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2051426 GAUT10 "galacturonosyltransferase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00026307001 | SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (423 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 412 | |||
| PLN02910 | 657 | PLN02910, PLN02910, polygalacturonate 4-alpha-gala | 6e-91 | |
| PLN02829 | 639 | PLN02829, PLN02829, Probable galacturonosyltransfe | 8e-71 | |
| PLN02718 | 603 | PLN02718, PLN02718, Probable galacturonosyltransfe | 3e-60 | |
| PLN02769 | 629 | PLN02769, PLN02769, Probable galacturonosyltransfe | 2e-50 | |
| PLN02742 | 534 | PLN02742, PLN02742, Probable galacturonosyltransfe | 2e-33 | |
| PLN02523 | 559 | PLN02523, PLN02523, galacturonosyltransferase | 2e-27 | |
| PLN02870 | 533 | PLN02870, PLN02870, Probable galacturonosyltransfe | 3e-17 | |
| PLN02867 | 535 | PLN02867, PLN02867, Probable galacturonosyltransfe | 1e-13 | |
| PLN02659 | 534 | PLN02659, PLN02659, Probable galacturonosyltransfe | 1e-13 | |
| cd06429 | 257 | cd06429, GT8_like_1, GT8_like_1 represents a subfa | 5e-06 |
| >gnl|CDD|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase | Back alignment and domain information |
|---|
Score = 287 bits (736), Expect = 6e-91
Identities = 139/330 (42%), Positives = 209/330 (63%), Gaps = 24/330 (7%)
Query: 84 IDVIAASTVDLGPLSLDSLRKSNMSASWKFVGAETSVENNATSEPNQ-KAVRIEKEAPKG 142
I+++A + G + L ++ ++SASW EN A +Q K + +++
Sbjct: 48 INIVATYSDTSGNIRLGRVKMKDLSASWVL-------ENPADKVHDQPKGSQRLEDSSSF 100
Query: 143 KGDNILADGHSQLVD----------------TPAKQFRRQLRERRREKRAADLVQQDDEA 186
+ D S +P K R+ LR+ RR+ R A+L+QQD EA
Sbjct: 101 QNGTGEEDNVSHSTTNQTDESGIQFPNKLPASPVKLQRQILRQERRDLRTAELIQQDKEA 160
Query: 187 IVKLENAAIERSKSVDSAVLGKYSIWRKENENDNSDSTVRLMRDQMIMARVYLSIAKMKN 246
+ + AAIERSKS+D++V GKYSIWR++ E+ NSDS ++LMRDQ+IMA+ Y +IAK N
Sbjct: 161 DSQTQAAAIERSKSLDTSVKGKYSIWRRDYESPNSDSILKLMRDQIIMAKAYANIAKSNN 220
Query: 247 KPDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLYDCKLVTGKL 306
+L L + +E++RA+G+ +DA+LH S ++ K MG VLS A++QLYDC + KL
Sbjct: 221 VTNLYVSLMKQFRENKRAIGEATSDAELHSSALDQAKAMGHVLSIAKDQLYDCHTMARKL 280
Query: 307 RAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLLPPEKRKFPGSENL 366
RAMLQ+ + +V +LKK+S FL QLAAKT+P +HC+ ++L +Y+LL + + + + L
Sbjct: 281 RAMLQSTERKVDALKKKSAFLIQLAAKTVPKPLHCLPLQLAADYFLLGFQNKDYVNKKKL 340
Query: 367 ENPNLYHYALFSDNVLAASVVVNSTIMNAK 396
E+P+LYHYA+FSDNVLA SVVVNST+++AK
Sbjct: 341 EDPSLYHYAIFSDNVLATSVVVNSTVLHAK 370
|
Length = 657 |
| >gnl|CDD|215443 PLN02829, PLN02829, Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|178320 PLN02718, PLN02718, Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|215412 PLN02769, PLN02769, Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|215395 PLN02742, PLN02742, Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|215286 PLN02523, PLN02523, galacturonosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|215468 PLN02870, PLN02870, Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|178458 PLN02867, PLN02867, Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|215356 PLN02659, PLN02659, Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 412 | |||
| PLN02910 | 657 | polygalacturonate 4-alpha-galacturonosyltransferas | 100.0 | |
| PLN02769 | 629 | Probable galacturonosyltransferase | 100.0 | |
| PLN02829 | 639 | Probable galacturonosyltransferase | 100.0 | |
| PLN02742 | 534 | Probable galacturonosyltransferase | 100.0 | |
| PLN02718 | 603 | Probable galacturonosyltransferase | 100.0 | |
| PLN02867 | 535 | Probable galacturonosyltransferase | 100.0 | |
| PLN02870 | 533 | Probable galacturonosyltransferase | 100.0 | |
| PLN02659 | 534 | Probable galacturonosyltransferase | 100.0 | |
| PLN02523 | 559 | galacturonosyltransferase | 100.0 | |
| PF10819 | 79 | DUF2564: Protein of unknown function (DUF2564) ; I | 81.86 |
| >PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-107 Score=846.06 Aligned_cols=326 Identities=42% Similarity=0.673 Sum_probs=309.3
Q ss_pred HHHHHHHhccCCCCceeccccccCCCCcCcEEecccccccccCCC----CCCcc-------chhhhhcCCCCCCCCCccC
Q 015141 82 DVIDVIAASTVDLGPLSLDSLRKSNMSASWKFVGAETSVENNATS----EPNQK-------AVRIEKEAPKGKGDNILAD 150 (412)
Q Consensus 82 e~id~i~~~~~~~G~l~l~~~~~~~ls~sw~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~~~~~~~~~~ 150 (412)
++||+++||++..|.++|..|++++||+||++++|.+.+++++.. ++... .+...++ .+++++++ +
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~ 122 (657)
T PLN02910 46 KDINIVATYSDTSGNIRLGRVKMKDLSASWVLENPADKVHDQPKGSQRLEDSSSFQNGTGEEDNVSHS--TTNQTDES-G 122 (657)
T ss_pred cchhhheeeecccccEEEEeeeeccccchhhhcCccccccCcccccccccchhhhccCcccccchhhh--hhhccccc-c
Confidence 789999999999999999999999999999999999999888732 22221 2333333 36777777 7
Q ss_pred CCCCC--CCCHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHHHHHHHhhcccccccccccccccccccCCCCchhHHHHh
Q 015141 151 GHSQL--VDTPAKQFRRQLRERRREKRAADLVQQDDEAIVKLENAAIERSKSVDSAVLGKYSIWRKENENDNSDSTVRLM 228 (412)
Q Consensus 151 ~~~~~--~~~p~~~~~~~~r~~~~~~r~~~l~~~d~e~~~~~e~~ai~rsk~~d~~~~g~y~iWr~e~e~~~~Ds~vr~l 228 (412)
++.++ +++|+||+||++|++||+.|++||++||+|++.++|++||+|||+||++++|||||||+||++.|+|++||+|
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~d~~~~g~y~~w~~e~~~~~~d~~vk~l 202 (657)
T PLN02910 123 IQFPNKLPASPVKLQRQILRQERRDLRTAELIQQDKEADSQTQAAAIERSKSLDTSVKGKYSIWRRDYESPNSDSILKLM 202 (657)
T ss_pred ccCcccCCCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhhhHHHhhhhhccCcccccceeeecccccccCcHHHHHHH
Confidence 77777 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccCCCchhHHHHHHHHHHHHHHhcccccCccCCCCHHHHHHHHHHHHHHhhccccChHHHHHHHHH
Q 015141 229 RDQMIMARVYLSIAKMKNKPDLQQELQSRLKESQRALGDTAADADLHHSVPEKIKLMGQVLSKAREQLYDCKLVTGKLRA 308 (412)
Q Consensus 229 kDQli~AKaY~~iAk~~nn~~L~~EL~~~Ire~qr~L~eA~~D~dLp~~a~~kik~M~~~L~kAK~~~yDc~~~~~KLRa 308 (412)
||||||||||++|||++||++|+|||++||||+||+||+|++|+|||+++.++|++|+++|++||+++|||+++++|||+
T Consensus 203 kDQl~~AkaY~~iak~~~~~~l~~eL~~~i~e~~r~ls~a~~d~dlp~~~~~k~~~M~~~l~~ak~~~~d~~~~~~KLra 282 (657)
T PLN02910 203 RDQIIMAKAYANIAKSNNVTNLYVSLMKQFRENKRAIGEATSDAELHSSALDQAKAMGHVLSIAKDQLYDCHTMARKLRA 282 (657)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHhhcccccccCchHHHHHHHHHHHHHHHHhcccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHhhhhccCCCccccccchhhHHhhhCCCCCCCCCCCCCccCCCcceEEEEeCceeeehhhh
Q 015141 309 MLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCMSMRLTIEYYLLPPEKRKFPGSENLENPNLYHYALFSDNVLAASVVV 388 (412)
Q Consensus 309 mL~~~Eeqv~~~kkQs~fl~qLAAktiPKsLHCLsmRLT~EY~~~~~~~~~~p~~ekLeDpsLyHYaIFSDNVLAASVVV 388 (412)
||+++||+++++|+|++||+||||+|||||||||+||||+|||.+++.++++|++|+|+||+||||||||||||||||||
T Consensus 283 ml~~~Ee~~~~~k~qs~~l~qlaa~t~PK~lHCL~mRLt~Ey~~~~~~~~~~p~~~~l~dp~l~Hy~ifSDNVLAaSVVV 362 (657)
T PLN02910 283 MLQSTERKVDALKKKSAFLIQLAAKTVPKPLHCLPLQLAADYFLLGFQNKDYVNKKKLEDPSLYHYAIFSDNVLATSVVV 362 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCccccchhhHHHHHhCchhhccCCChhhccCCcceeEEEEecceeeEEeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhcccccCCeEEEEEecccC
Q 015141 389 NSTIMNAKVCRLLILLHCCLNAL 411 (412)
Q Consensus 389 NSTV~nAkeP~k~VvFHvVTd~~ 411 (412)
||||+||++|+|+| ||||||++
T Consensus 363 nSTv~na~~P~k~V-FHiVTD~~ 384 (657)
T PLN02910 363 NSTVLHAKEPQKHV-FHIVTDKL 384 (657)
T ss_pred hhhhhcccCccceE-EEEecCcc
Confidence 99999999999998 99999987
|
|
| >PLN02769 Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >PLN02829 Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >PLN02742 Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >PLN02718 Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >PLN02867 Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >PLN02870 Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >PLN02659 Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >PLN02523 galacturonosyltransferase | Back alignment and domain information |
|---|
| >PF10819 DUF2564: Protein of unknown function (DUF2564) ; InterPro: IPR020314 This entry contains proteins with no known function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 412 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-08 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 8e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 7e-08
Identities = 61/395 (15%), Positives = 120/395 (30%), Gaps = 137/395 (34%)
Query: 74 YIKSLLSKDVID-VIAASTVDLGPLSL-DSLRKSNMSASWKFVGAETSVENNATSEPNQK 131
KS+LSK+ ID +I + G L L +L KFV
Sbjct: 41 MPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE---------------- 84
Query: 132 AVRIEKEAPKGKGDNILADGHSQLVDTPAKQFRRQLRERRREKRAADLVQQDDEAIVKLE 191
+L + L+ + + R+ R ++Q D +L
Sbjct: 85 --------------EVLRINYKFLMS----PIKTEQRQPSMMTRM--YIEQRD----RLY 120
Query: 192 NAAIERSKSVDSAVLGKYSIWRKEN--------ENDNSDSTVRL--M------------- 228
N D+ V KY++ R + V + +
Sbjct: 121 N---------DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171
Query: 229 RDQMIMAR----VY-LSIAKMKNKPDL----QQELQSRLKESQRALGDTAADADLH-HSV 278
+ + ++ L++ N P+ Q+L ++ + + D +++ L HS+
Sbjct: 172 LSYKVQCKMDFKIFWLNLKN-CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 279 PEKIK-LMGQ--------VL----SKAREQLYD--CK-LVTGKLRAM---LQTADEQVRS 319
+++ L+ VL + ++ CK L+T + + + L A S
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 320 LKKQS-TF-----LSQLA------AKTIPN---GIH--CMSM--------RLTIEYYL-- 352
L S T S L + +P + +S+ T + +
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHV 350
Query: 353 -LPPEKRKFPGSENLENPNLY--HY---ALFSDNV 381
S N+ P Y + ++F +
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00