Citrus Sinensis ID: 015155

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410--
MFTNYEVSACADSAKLDMPAENNLQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGRLTKMLSGSERIGLSWPEPPLNLLTQKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDAEIENEDVVAEMGINAGIGCFRLEQDI
cccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccHHHHccccccHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEccccEEHHHHccHHHHHcccccccEEEEcccccccccccEEEEEEEEccEEEEEEccccccccccccHHHHHHHHHHHHHccccccccccccccccccccEEEEcccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEEEccccccccccccEEEEEEEEEEEEcHHHHHHHHHHHHHHcccccEEEEcccccccccccccccc
cccccccHHHHHHcccccccHHHHHHHcccccccccccccccccccccccccccccccccEEEEccccccccccccccHHHcHHHccccccccccccccHHccccccccccccccccccccccccHHHHHHHHHHccccccHEEEEHHHHHHEEEEEEEHHHHHHHHHccEEcccccccccccccccEEEEEEEEEccEEEEEEHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccEEEcccHHHHHHHHHHccHHHHHHHHHHHHHHHcccEEccccccEEEcccEEEEccccHHHccccccccccccccHHHEEEcccccEEEEEEEcEEEccccccEEEEEEEEEEEEcHHHHHHHHHHHHHHcccHHccccccccccccEEEEcccc
mftnyevsacadsakldmpaennlqrhfsspkrfDRLYCLRMEeskgnveapavqyngrltkmlsgseriglswpepplnlltqkvlerpnslktvksfktsnsfrryssfkpavdDMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAhltsgekdgdelkrnadvheihrrthfrshseigfpksicdheriIWLGDlnyrinlpyekTRELISKKQWSKLAESDQLLRELRKgrafdgwsegtlifaptykyelnsekyygedpkvgrrnpswcdrILSYGKGMRLLNyrrneikmsdhrpvtATYMAEVEVFSPRKLQRALtltdaeienEDVVAEMGINAGIGcfrleqdi
MFTNYEVsacadsakldmpaennlqrhfsspkrFDRLYCLRMEeskgnveapavqyngRLTKMLSGSERIGLSWPEPPLNLLTQkvlerpnslktvksfktsnsfrryssfkpavddMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQnvrvstvgvgVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIhrrthfrshseigfpksiCDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKgrafdgwsegtlifaptykyelnSEKYygedpkvgrrnpsWCDRILSYGKGMRLLNYrrneikmsdhrpVTATYMaevevfsprKLQRALTLTDAEIENEDVVAEMGINAGIGcfrleqdi
MFTNYEVSACADSAKLDMPAENNLQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGRLTKMLSGSERIGLSWPEPPLNLLTQKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDAEIENEDVVAEMGINAGIGCFRLEQDI
*********************************FDRLYCLRM***********VQYNGRLTKM*****RIGLSWP***LNLLT*************************************ELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTS*************VHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDAEIENEDVVAEMGINAGIGCFRL****
*************************************************************************WPEPPLNLLT****************************************LLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHF**********SICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDAEIENEDVVAEMGINAGIGCFRLEQ**
MFTNYEVSACADSAKLDMPAENNLQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGRLTKMLSGSERIGLSWPEPPLNLLTQKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDAEIENEDVVAEMGINAGIGCFRLEQDI
***NYEVSACADSAKLDMPAENNLQRHFSSPKRFDRLYCLRME**************GRLTKMLSGSERIGLSWPEPPLNLLTQKVLERP*******SF**SNSFRRYSSFKPAVDDMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDAEIENEDVVAEMGINAGIGCFRL****
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MFTNYEVSACADSAKLDMPAENNLQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGRLTKMLSGSERIGLSWPEPPLNLLTQKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDAEIENEDVVAEMGINAGIGCFRLEQDI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query412 2.2.26 [Sep-21-2011]
Q84MA2590 Type I inositol 1,4,5-tri no no 0.839 0.586 0.563 1e-120
Q9FUR2646 Type I inositol 1,4,5-tri no no 0.635 0.405 0.553 1e-84
Q9LR47617 Type I inositol 1,4,5-tri no no 0.616 0.411 0.511 1e-75
Q62910 1574 Synaptojanin-1 OS=Rattus yes no 0.531 0.139 0.359 2e-41
Q8CHC4 1574 Synaptojanin-1 OS=Mus mus yes no 0.536 0.140 0.362 2e-41
O43426 1573 Synaptojanin-1 OS=Homo sa yes no 0.536 0.140 0.358 4e-41
O18964 1324 Synaptojanin-1 (Fragment) yes no 0.531 0.165 0.355 1e-40
Q01968 901 Inositol polyphosphate 5- no no 0.577 0.264 0.367 1e-39
O55207 1496 Synaptojanin-2 OS=Rattus no no 0.538 0.148 0.365 7e-38
P32019 993 Type II inositol 1,4,5-tr no no 0.575 0.238 0.360 9e-38
>sp|Q84MA2|IP5P1_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase 1 OS=Arabidopsis thaliana GN=IP5P1 PE=1 SV=2 Back     alignment and function desciption
 Score =  430 bits (1106), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/394 (56%), Positives = 268/394 (68%), Gaps = 48/394 (12%)

Query: 2   FTNYEVSACADSAKLDMPAENNLQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGRLT 61
            TN +V    +     +P +  LQR FS+P   DR   L M+          +  + +  
Sbjct: 243 LTNIDVLGSTNDNASCLPIQEYLQRQFSTPNTPDR--SLSMQ----------INSDSKRE 290

Query: 62  KMLSGSERIGLSWPEPPLNLLTQKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSSE 121
           +  S +ER+GLSWPEPPL LL Q V ER  S K+V                         
Sbjct: 291 ERFSYTERVGLSWPEPPLRLLNQYVSERRGSFKSVN------------------------ 326

Query: 122 LALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMG 181
                 + I  L    R+ SYVR+VSKQMVG+FLTIWVRR+LR+HI N+ VSTVGVG+MG
Sbjct: 327 ------LTITNL----RKPSYVRIVSKQMVGVFLTIWVRRNLRKHISNLCVSTVGVGIMG 376

Query: 182 FIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIG-- 239
           +IGNKGSVSVSMSI+QT FCF+C HL+SGEKD D+ KRN DV EIHRRT F  HS     
Sbjct: 377 YIGNKGSVSVSMSIYQTPFCFLCTHLSSGEKDTDQEKRNDDVREIHRRTQFLPHSLNANE 436

Query: 240 FPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWS 299
            P+SIC+HERIIWLGDLNYRINL YEKT ELI++K+W +L E DQL RE+ KG  F+GWS
Sbjct: 437 LPRSICNHERIIWLGDLNYRINLSYEKTHELIARKEWQRLVEYDQLSREMTKGNLFEGWS 496

Query: 300 EGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHR 359
           EGTL FAPTYKYE++SE Y G+DP+ G+R P+WCDRI+  GKGM+L NYRRNEIK+SDHR
Sbjct: 497 EGTLDFAPTYKYEIDSENYIGDDPESGKRRPAWCDRIIWNGKGMKLFNYRRNEIKLSDHR 556

Query: 360 PVTATYMAEVEVFSPRKLQRALTLTDAEIENEDV 393
           PVTAT++AEVEV SPRKLQ ALTLT AEI+  D 
Sbjct: 557 PVTATFLAEVEVLSPRKLQHALTLTYAEIQGLDA 590
Seems to be involved in the abscisic acid (ABA) signaling pathway. Has phosphatase activity toward Ins(1,4,5)P3 and Ins(1,3,4,5)P4, but not toward Ins(1,4)P2 and Ins(1)P.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 5EC: 6
>sp|Q9FUR2|IP5P2_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase 2 OS=Arabidopsis thaliana GN=IP5P2 PE=1 SV=2 Back     alignment and function description
>sp|Q9LR47|IP5P3_ARATH Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 PE=1 SV=2 Back     alignment and function description
>sp|Q62910|SYNJ1_RAT Synaptojanin-1 OS=Rattus norvegicus GN=Synj1 PE=1 SV=3 Back     alignment and function description
>sp|Q8CHC4|SYNJ1_MOUSE Synaptojanin-1 OS=Mus musculus GN=Synj1 PE=1 SV=3 Back     alignment and function description
>sp|O43426|SYNJ1_HUMAN Synaptojanin-1 OS=Homo sapiens GN=SYNJ1 PE=1 SV=2 Back     alignment and function description
>sp|O18964|SYNJ1_BOVIN Synaptojanin-1 (Fragment) OS=Bos taurus GN=SYNJ1 PE=1 SV=2 Back     alignment and function description
>sp|Q01968|OCRL_HUMAN Inositol polyphosphate 5-phosphatase OCRL-1 OS=Homo sapiens GN=OCRL PE=1 SV=3 Back     alignment and function description
>sp|O55207|SYNJ2_RAT Synaptojanin-2 OS=Rattus norvegicus GN=Synj2 PE=1 SV=2 Back     alignment and function description
>sp|P32019|I5P2_HUMAN Type II inositol 1,4,5-trisphosphate 5-phosphatase OS=Homo sapiens GN=INPP5B PE=1 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query412
255566748 575 type I inositol polyphosphate 5-phosphat 0.973 0.697 0.733 1e-175
449446385 630 PREDICTED: type I inositol 1,4,5-trispho 0.951 0.622 0.750 1e-174
224062844 647 predicted protein [Populus trichocarpa] 0.936 0.596 0.737 1e-168
147782550 792 hypothetical protein VITISV_017614 [Viti 0.990 0.515 0.683 1e-168
225470844 674 PREDICTED: type I inositol-1,4,5-trispho 1.0 0.611 0.669 1e-167
356576091 631 PREDICTED: type I inositol-1,4,5-trispho 0.949 0.619 0.696 1e-163
224085233 593 predicted protein [Populus trichocarpa] 0.912 0.634 0.695 1e-161
356535745 631 PREDICTED: type I inositol-1,4,5-trispho 0.949 0.619 0.691 1e-160
356561393 611 PREDICTED: type I inositol-1,4,5-trispho 0.941 0.635 0.683 1e-157
350537183 652 inositol-1,4,5-triphosphate-5-phosphatas 0.951 0.601 0.670 1e-154
>gi|255566748|ref|XP_002524358.1| type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis] gi|223536449|gb|EEF38098.1| type I inositol polyphosphate 5-phosphatase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  619 bits (1596), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 295/402 (73%), Positives = 337/402 (83%), Gaps = 1/402 (0%)

Query: 9   ACADSAKLDMPAENNLQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGRLTKMLSGSE 68
           A   S KL +P E  LQR FSSP+R +RL CLR E+S G+VEAPA   + +LTKMLS ++
Sbjct: 165 AVESSGKLGVPVEQELQRQFSSPRRLNRLNCLRTEDSAGDVEAPAGDNSRKLTKMLSCND 224

Query: 69  RIGLSWPEPPLNLLTQKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSSELALLAEI 128
           RIGL+WPE PLNLL+Q VL+RP S K +KSF+ S SF  Y+SFK   +DM SELALLAE 
Sbjct: 225 RIGLTWPETPLNLLSQHVLQRPTSFKAMKSFRASKSFGTYNSFKSVTNDMQSELALLAET 284

Query: 129 DIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGS 188
           D+E LMKRKRRSSYVR+VSKQMVGIFLTIWVRRSLR+HI+NV+VSTVGVGVMG+IGNKG+
Sbjct: 285 DLEALMKRKRRSSYVRIVSKQMVGIFLTIWVRRSLRKHIRNVKVSTVGVGVMGYIGNKGA 344

Query: 189 VSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHE 248
           +SVSMSI+QTLFCF+C HLTSGEKDGDELKRNADVHEIHRRT F +   IG PK I DHE
Sbjct: 345 ISVSMSIYQTLFCFICTHLTSGEKDGDELKRNADVHEIHRRTQFHTFPGIGLPKGILDHE 404

Query: 249 RIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPT 308
           RIIWLGDLNYRINL YEKTRELIS+KQWS+L E DQL+RELRKGRAFDGW+EG L F PT
Sbjct: 405 RIIWLGDLNYRINLSYEKTRELISQKQWSELVEKDQLVRELRKGRAFDGWTEGALKFPPT 464

Query: 309 YKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAE 368
           YKYE+NS+KYYG DPK GRR P+WCDRILSYGKGMRLL+Y R E+K+SDHRPV ATYMAE
Sbjct: 465 YKYEMNSDKYYGADPKAGRRVPAWCDRILSYGKGMRLLSYGRTELKLSDHRPVAATYMAE 524

Query: 369 VEVFSPRKLQRALTLTDAEIENEDVVAEMGINAGIGCFRLEQ 410
            EVF  RKLQRALT TDAEIENE+V+ E  ++ G+   RLEQ
Sbjct: 525 AEVFCHRKLQRALTYTDAEIENEEVI-EASLDVGMSHLRLEQ 565

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449446385|ref|XP_004140952.1| PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224062844|ref|XP_002300898.1| predicted protein [Populus trichocarpa] gi|222842624|gb|EEE80171.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147782550|emb|CAN61802.1| hypothetical protein VITISV_017614 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225470844|ref|XP_002266259.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356576091|ref|XP_003556167.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|224085233|ref|XP_002307521.1| predicted protein [Populus trichocarpa] gi|222856970|gb|EEE94517.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356535745|ref|XP_003536404.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356561393|ref|XP_003548966.1| PREDICTED: type I inositol-1,4,5-trisphosphate 5-phosphatase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|350537183|ref|NP_001234795.1| inositol-1,4,5-triphosphate-5-phosphatase [Solanum lycopersicum] gi|157863710|gb|ABV90876.1| inositol-1,4,5-triphosphate-5-phosphatase [Solanum lycopersicum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query412
TAIR|locus:2013031664 AT1G71710 "AT1G71710" [Arabido 0.902 0.560 0.662 4.4e-132
TAIR|locus:2009061590 IP5PI "AT1G34120" [Arabidopsis 0.618 0.432 0.719 1.3e-111
TAIR|locus:2141095646 IP5PII "AT4G18010" [Arabidopsi 0.633 0.404 0.554 8.3e-83
TAIR|locus:2077314547 AT3G63240 [Arabidopsis thalian 0.635 0.478 0.509 5.3e-72
TAIR|locus:2201016617 CVP2 "COTYLEDON VASCULAR PATTE 0.616 0.411 0.507 1.8e-71
TAIR|locus:2045502594 CVL1 "CVP2 like 1" [Arabidopsi 0.616 0.427 0.511 2.1e-70
TAIR|locus:2171805529 BST1 "BRISTLED 1" [Arabidopsis 0.601 0.468 0.513 3.6e-66
TAIR|locus:2049826479 AT2G37440 [Arabidopsis thalian 0.555 0.478 0.538 1.1e-64
TAIR|locus:2059708417 AT2G01900 [Arabidopsis thalian 0.580 0.573 0.516 1.6e-63
TAIR|locus:2175344466 AT5G04980 [Arabidopsis thalian 0.587 0.519 0.479 8.8e-63
TAIR|locus:2013031 AT1G71710 "AT1G71710" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1295 (460.9 bits), Expect = 4.4e-132, P = 4.4e-132
 Identities = 249/376 (66%), Positives = 302/376 (80%)

Query:    24 LQRHFSSPKRFDRLYCLRMEESKGNVEAPAVQYNGR-LTKMLSGSERIGLSWPEPPLNLL 82
             ++R FS PK+ DR  CLR +  KG  +  + Q   + + +MLSG ERIGLSWPEPPLN+L
Sbjct:   286 IKRQFSIPKKLDRQLCLRADSFKGISDDDSTQTGMKTINRMLSGKERIGLSWPEPPLNML 345

Query:    83 TQKVLERPNSLKTVKSFKTSNSFRRYSSFKPAVDDMSS---ELALLAEIDIETLMKRKRR 139
                VL+R  S+KTVKS KT+ SF+ YSSFK    + +    E+  LAE+D++ LM+RKRR
Sbjct:   346 GPCVLDRQPSIKTVKSLKTAKSFKAYSSFKSVAGNNNGIPPEVLALAEMDLKLLMERKRR 405

Query:   140 SSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTL 199
              +YVR+VSKQMVGI LTIWV+RSLR+HIQNVRVSTVGVGVMG+IGNKG+VSVSMSI+QT 
Sbjct:   406 PAYVRLVSKQMVGILLTIWVKRSLRKHIQNVRVSTVGVGVMGYIGNKGAVSVSMSINQTF 465

Query:   200 FCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYR 259
             FCF+  HLT+GE++ D++KRNADVHEIH+RT F S S +G PK I DHERIIWLGDLNYR
Sbjct:   466 FCFINTHLTAGEREVDQIKRNADVHEIHKRTVFHSVSALGLPKLIYDHERIIWLGDLNYR 525

Query:   260 INLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYY 319
             ++  YEKTR+LISK++WSKL E DQL++E RKGRAFDGWSEGTL F PTYKY+ NS++Y 
Sbjct:   526 LSSSYEKTRDLISKREWSKLLEYDQLVKEYRKGRAFDGWSEGTLHFPPTYKYQANSDEYT 585

Query:   320 GEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQR 379
               D K  +R P+WCDR+LSYGKGMRL++YRR E K SDHRPVTA YMAEVEVFS RKLQR
Sbjct:   586 ANDGKAPKRTPAWCDRVLSYGKGMRLVHYRRTEQKFSDHRPVTAIYMAEVEVFSARKLQR 645

Query:   380 ALTLTDAEIENEDVVA 395
             ALT TDAEIE+E +VA
Sbjct:   646 ALTFTDAEIEDEGLVA 661
GO:0004445 "inositol-polyphosphate 5-phosphatase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0046854 "phosphatidylinositol phosphorylation" evidence=IEA
GO:0032957 "inositol trisphosphate metabolic process" evidence=RCA
GO:0046855 "inositol phosphate dephosphorylation" evidence=RCA
TAIR|locus:2009061 IP5PI "AT1G34120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141095 IP5PII "AT4G18010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077314 AT3G63240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201016 CVP2 "COTYLEDON VASCULAR PATTERN 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045502 CVL1 "CVP2 like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171805 BST1 "BRISTLED 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049826 AT2G37440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059708 AT2G01900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175344 AT5G04980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.766
3rd Layer3.1.3.56LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.V.463.1
hypothetical protein (555 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
PLN03191621 PLN03191, PLN03191, Type I inositol-1,4,5-trisphos 1e-126
cd09093292 cd09093, INPP5c_INPP5B, Catalytic inositol polypho 2e-71
cd09074299 cd09074, INPP5c, Catalytic domain of inositol poly 2e-65
cd09089328 cd09089, INPP5c_Synj, Catalytic inositol polyphosp 6e-65
cd09090291 cd09090, INPP5c_ScInp51p-like, Catalytic inositol 6e-63
smart00128306 smart00128, IPPc, Inositol polyphosphate phosphata 4e-62
cd09098336 cd09098, INPP5c_Synj1, Catalytic inositol polyphos 2e-48
cd09099336 cd09099, INPP5c_Synj2, Catalytic inositol polyphos 2e-46
cd09094300 cd09094, INPP5c_INPP5J-like, Catalytic inositol po 1e-45
COG5411460 COG5411, COG5411, Phosphatidylinositol 5-phosphate 6e-44
cd09095298 cd09095, INPP5c_INPP5E-like, Catalytic inositol po 2e-31
cd09101304 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol p 7e-28
cd09091307 cd09091, INPP5c_SHIP, Catalytic inositol polyphosp 8e-28
cd09100307 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol p 5e-27
cd08372241 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase 1e-05
>gnl|CDD|215624 PLN03191, PLN03191, Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information 
 Score =  378 bits (972), Expect = e-126
 Identities = 169/357 (47%), Positives = 235/357 (65%), Gaps = 24/357 (6%)

Query: 54  VQYNGRLTKMLSGSERIGLSWPEPPLNLLTQKV-LERPNSLKTVKSFKTSNSF---RRYS 109
           V  N +L ++ S S R+G  WPE P     Q+  L      ++ +SF          +  
Sbjct: 254 VSSNSKLRRVFSSSARLGFKWPENPSLFSPQRFALNARGLKRSHRSFGNLGLSWNEIKQR 313

Query: 110 SFKPAV----DDMSSELALLAEIDIETLM--------------KRKRRSSYVRMVSKQMV 151
           S  P V    D +S      +E + +T                 RK +  YVR+VSKQMV
Sbjct: 314 SEVPEVPEVIDSLSDVSDRSSEAEDDTFKEVPSYQLPEDLIKDCRKVKQKYVRIVSKQMV 373

Query: 152 GIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGE 211
           GI++++WVR+ LRRHI N++VS VGVG+MG++GNKGSVS+SMS+ Q+  CFVC+HLTSG 
Sbjct: 374 GIYVSVWVRKRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRLCFVCSHLTSGH 433

Query: 212 KDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELI 271
           KDG E +RNADV+EI RRT F S  +   P++I  H++I W GDLNYR+N+   + R+L+
Sbjct: 434 KDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRLNMLDTEVRKLV 493

Query: 272 SKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVG--RRN 329
           ++K+W +L  SDQL++ELR G  FDGW EG + F PTYKYE+NS++Y GE+PK G  +R+
Sbjct: 494 AQKRWDELINSDQLIKELRSGHVFDGWKEGPIKFPPTYKYEINSDRYVGENPKEGEKKRS 553

Query: 330 PSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDA 386
           P+WCDRIL  GKG++ L Y+R+EI++SDHRPV++ ++ EVEVF  RKLQRAL +  A
Sbjct: 554 PAWCDRILWLGKGIKQLCYKRSEIRLSDHRPVSSMFLVEVEVFDHRKLQRALNVNSA 610

Length = 621
>gnl|CDD|197327 cd09093, INPP5c_INPP5B, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Type II inositol polyphosphate 5-phosphatase I, Oculocerebrorenal syndrome of Lowe 1, and related proteins Back     alignment and domain information
>gnl|CDD|197308 cd09074, INPP5c, Catalytic domain of inositol polyphosphate 5-phosphatases Back     alignment and domain information
>gnl|CDD|197323 cd09089, INPP5c_Synj, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanins Back     alignment and domain information
>gnl|CDD|197324 cd09090, INPP5c_ScInp51p-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Saccharomyces cerevisiae Inp51p, Inp52p, and Inp53p, and related proteins Back     alignment and domain information
>gnl|CDD|214525 smart00128, IPPc, Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>gnl|CDD|197332 cd09098, INPP5c_Synj1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 1 Back     alignment and domain information
>gnl|CDD|197333 cd09099, INPP5c_Synj2, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of synaptojanin 2 Back     alignment and domain information
>gnl|CDD|197328 cd09094, INPP5c_INPP5J-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of inositol polyphosphate 5-phosphatase J and related proteins Back     alignment and domain information
>gnl|CDD|227698 COG5411, COG5411, Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|197329 cd09095, INPP5c_INPP5E-like, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins Back     alignment and domain information
>gnl|CDD|197335 cd09101, INPP5c_SHIP2-INPPL1, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol 5-phosphatase-2 and related proteins Back     alignment and domain information
>gnl|CDD|197325 cd09091, INPP5c_SHIP, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and -2, and related proteins Back     alignment and domain information
>gnl|CDD|197334 cd09100, INPP5c_SHIP1-INPP5D, Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of SH2 domain containing inositol polyphosphate 5-phosphatase-1 and related proteins Back     alignment and domain information
>gnl|CDD|197306 cd08372, EEP, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 412
PLN03191621 Type I inositol-1,4,5-trisphosphate 5-phosphatase 100.0
KOG0566 1080 consensus Inositol-1,4,5-triphosphate 5-phosphatas 100.0
smart00128310 IPPc Inositol polyphosphate phosphatase, catalytic 100.0
COG5411460 Phosphatidylinositol 5-phosphate phosphatase [Sign 100.0
PTZ00312356 inositol-1,4,5-triphosphate 5-phosphatase; Provisi 99.97
KOG0565145 consensus Inositol polyphosphate 5-phosphatase and 99.95
KOG1976391 consensus Inositol polyphosphate 5-phosphatase, ty 99.81
TIGR03395283 sphingomy sphingomyelin phosphodiesterase. Members 98.57
PRK05421263 hypothetical protein; Provisional 98.5
PF03372249 Exo_endo_phos: Endonuclease/Exonuclease/phosphatas 98.25
COG3568259 ElsH Metal-dependent hydrolase [General function p 98.01
PRK11756268 exonuclease III; Provisional 97.66
PTZ00297 1452 pantothenate kinase; Provisional 97.51
TIGR00633255 xth exodeoxyribonuclease III (xth). This family is 97.43
PLN03144606 Carbon catabolite repressor protein 4 homolog; Pro 96.51
KOG3873422 consensus Sphingomyelinase family protein [Signal 96.27
TIGR00195254 exoDNase_III exodeoxyribonuclease III. The model b 96.13
smart00476276 DNaseIc deoxyribonuclease I. Deoxyribonuclease I c 96.02
COG3021309 Uncharacterized protein conserved in bacteria [Fun 95.79
PRK13911250 exodeoxyribonuclease III; Provisional 95.57
PRK15251271 cytolethal distending toxin subunit CdtB; Provisio 95.3
PF14529119 Exo_endo_phos_2: Endonuclease-reverse transcriptas 95.24
KOG2756349 consensus Predicted Mg2+-dependent phosphodiestera 93.21
KOG2338495 consensus Transcriptional effector CCR4-related pr 86.17
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.9e-91  Score=732.96  Aligned_cols=334  Identities=50%  Similarity=0.900  Sum_probs=297.4

Q ss_pred             cccccccccccccccccccCCCCcccchhhhhhcCCCchhhhcccccccccccc--------------------cccccc
Q 015155           55 QYNGRLTKMLSGSERIGLSWPEPPLNLLTQKVLERPNSLKTVKSFKTSNSFRRY--------------------SSFKPA  114 (412)
Q Consensus        55 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~--------------------~~~~~~  114 (412)
                      .++++|+|+||.+|||||.||||||+|++|++..+.+|+++     +.++|..+                    .++.++
T Consensus       255 ~~~~~l~r~~s~~~r~~~~~~e~p~~~~~~~~~~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (621)
T PLN03191        255 SSNSKLRRVFSSSARLGFKWPENPSLFSPQRFALNARGLKR-----SHRSFGNLGLSWNEIKQRSEVPEVPEVIDSLSDV  329 (621)
T ss_pred             cccccceeeeccccccccCCCCCccccCchhhcccccccch-----hhhccccccccccchhhccccccccccccccccc
Confidence            46789999999999999999999999999999777665544     22333322                    234444


Q ss_pred             ccc-cchHHHHHHHhhH----HHH--HhccCCCCeEEEEeeehheeeeeeeEecccccccceeeEeEEeeccccccCCee
Q 015155          115 VDD-MSSELALLAEIDI----ETL--MKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKG  187 (412)
Q Consensus       115 ~~~-~~~~~~~~~~~~~----~~~--~~~~~~~~Yv~v~s~qmvGi~L~Vfvr~~l~~~Is~v~~~~V~tG~~G~~GNKG  187 (412)
                      .++ ..++.+++++++.    +..  ...+...+|++|.|+||+||+|+||||+++.++|++|++++|+||+||++||||
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YvkV~S~qLvGl~L~VFvk~~l~~~Is~V~~s~V~tGl~G~~GNKG  409 (621)
T PLN03191        330 SDRSSEAEDDTFKEVPSYQLPEDLIKDCRKVKQKYVRIVSKQMVGIYVSVWVRKRLRRHINNLKVSPVGVGLMGYMGNKG  409 (621)
T ss_pred             ccccCCCcccccccCChhhhhhHHHHhhccCCCCEEEEEEEeeeeEEEEEEEehhhhhhcccceeeeEeeccccccccce
Confidence            433 3344667777766    444  456688999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEEECCEEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccCCChHHH
Q 015155          188 SVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKT  267 (412)
Q Consensus       188 aV~vr~~i~~t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~l~~~~v  267 (412)
                      ||+|+|.+++++||||||||+||+++++.++||+|+.+|++++.|.+..+...|..|.+||+|||||||||||+++++++
T Consensus       410 AVaIr~~l~~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYRIdl~~~ev  489 (621)
T PLN03191        410 SVSISMSLFQSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRLNMLDTEV  489 (621)
T ss_pred             eEEEEEEEcCcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCccccccCCHHHH
Confidence            99999999999999999999999988878899999999999999976545556788999999999999999999999999


Q ss_pred             HHHHhhhcHHHHHhhhHHHHHHHcCCCcccccccCcccCCCccccCCCccccCC--CCCCCCCCCccccceeecCCCeeE
Q 015155          268 RELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGE--DPKVGRRNPSWCDRILSYGKGMRL  345 (412)
Q Consensus       268 ~~lI~~~~~~~Ll~~DQL~~e~~~g~~F~gf~E~~I~FpPTYKy~~gs~~Y~~~--d~~~k~R~PSWcDRIL~~~~~i~~  345 (412)
                      +++|.+++|++||++|||+.++++|++|.||.|++|+|||||||++|++.|++.  +++.++|+|||||||||+++++++
T Consensus       490 ~~lI~~~~~~~LL~~DQL~~e~~~g~vF~GF~Eg~I~FpPTYKYd~gSd~Ydg~~~~Ts~KkR~PSWCDRILykg~~i~~  569 (621)
T PLN03191        490 RKLVAQKRWDELINSDQLIKELRSGHVFDGWKEGPIKFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKGIKQ  569 (621)
T ss_pred             HHHHhhccHHHHHHHhHHHHHHHcCCccCCcccCCccCCCCcccccCCccccccccccccCccccchhheEeecCCCceE
Confidence            999999999999999999999999999999999999999999999999999853  356789999999999999999999


Q ss_pred             eeeeccccccCCCCcceeEEEEEEEeeChhhhhhhccchhhh---hhchhh
Q 015155          346 LNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDAE---IENEDV  393 (412)
Q Consensus       346 l~Y~s~el~~SDHrPV~A~f~v~v~v~~~~kl~r~l~~~~~e---~~~~~~  393 (412)
                      +.|.+.++++||||||+|.|.++|++++++|+||++++++||   +|++.+
T Consensus       570 l~Y~s~ei~~SDHRPV~A~F~v~V~~id~~k~q~~~~~~~a~~~~~~~~~~  620 (621)
T PLN03191        570 LCYKRSEIRLSDHRPVSSMFLVEVEVFDHRKLQRALNVNSAAASAVHPEPS  620 (621)
T ss_pred             eEeccCCcccCCchhcceEEEEEEEecCHHHHHhhhhcchhhhhccCCccC
Confidence            999999999999999999999999999999999999999999   888754

>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues Back     alignment and domain information
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional Back     alignment and domain information
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism] Back     alignment and domain information
>TIGR03395 sphingomy sphingomyelin phosphodiesterase Back     alignment and domain information
>PRK05421 hypothetical protein; Provisional Back     alignment and domain information
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling [] Back     alignment and domain information
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only] Back     alignment and domain information
>PRK11756 exonuclease III; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>TIGR00633 xth exodeoxyribonuclease III (xth) Back     alignment and domain information
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional Back     alignment and domain information
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms] Back     alignment and domain information
>TIGR00195 exoDNase_III exodeoxyribonuclease III Back     alignment and domain information
>smart00476 DNaseIc deoxyribonuclease I Back     alignment and domain information
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK13911 exodeoxyribonuclease III; Provisional Back     alignment and domain information
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional Back     alignment and domain information
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B Back     alignment and domain information
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms] Back     alignment and domain information
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
3n9v_A313 Crystal Structure Of Inpp5b Length = 313 1e-38
3mtc_A313 Crystal Structure Of Inpp5b In Complex With Phospha 2e-38
1i9y_A347 Crystal Structure Of Inositol Polyphosphate 5-Phosp 3e-34
3nr8_B316 Crystal Structure Of Human Ship2 Length = 316 4e-24
2xsw_A357 Crystal Structure Of Human Inpp5e Length = 357 3e-21
1ntf_A282 Crystal Structure Of Cimex Nitrophorin Length = 282 1e-13
>pdb|3N9V|A Chain A, Crystal Structure Of Inpp5b Length = 313 Back     alignment and structure 
Iteration: 1

 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 134/234 (57%), Gaps = 7/234 (2%)
Query: 140 SSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTL 199
           + Y ++   ++VGI L ++V++    +I  V   TVG G+MG +GNKG V++    H T 
Sbjct: 74  AKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHNTS 133
Query: 200 FCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYR 259
            C V +HL +  ++ +  +RN D  +I  R  F        P +I +H+ I+WLGDLNYR
Sbjct: 134 ICVVNSHLAAHIEEYE--RRNQDYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYR 191
Query: 260 I-NLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKY 318
           I  L  EK ++LI +K +  L   DQL  ++     F+G++EG L F PTYKY+  S+ +
Sbjct: 192 IEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELTFQPTYKYDTGSDDW 251
Query: 319 YGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRN-EIKMSDHRPVTATYMAEVEV 371
              D     R P+WCDRIL  GK +  L+Y+ +  +K SDH+PV++ +   V V
Sbjct: 252 ---DTSEKCRAPAWCDRILWKGKNITQLSYQSHMALKTSDHKPVSSVFDIGVRV 302
>pdb|3MTC|A Chain A, Crystal Structure Of Inpp5b In Complex With Phosphatidylinositol 4- Phosphate Length = 313 Back     alignment and structure
>pdb|1I9Y|A Chain A, Crystal Structure Of Inositol Polyphosphate 5-Phosphatase Domain (Ipp5c) Of Spsynaptojanin Length = 347 Back     alignment and structure
>pdb|3NR8|B Chain B, Crystal Structure Of Human Ship2 Length = 316 Back     alignment and structure
>pdb|2XSW|A Chain A, Crystal Structure Of Human Inpp5e Length = 357 Back     alignment and structure
>pdb|1NTF|A Chain A, Crystal Structure Of Cimex Nitrophorin Length = 282 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query412
3mtc_A313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 1e-108
4a9c_A316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 1e-101
1i9z_A347 Synaptojanin, phosphatidylinositol phosphate phosp 7e-99
2xsw_A357 72 kDa inositol polyphosphate 5-phosphatase; inosi 8e-91
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 6e-89
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
2ddr_A306 Sphingomyelin phosphodiesterase; DNAse I like fold 6e-04
3i41_A317 Beta-hemolysin; beta toxin, sphingomyelinase, toxi 6e-04
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Length = 313 Back     alignment and structure
 Score =  319 bits (818), Expect = e-108
 Identities = 86/240 (35%), Positives = 133/240 (55%), Gaps = 7/240 (2%)

Query: 141 SYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLF 200
            Y ++   ++VGI L ++V++    +I  V   TVG G+MG +GNKG V++    H T  
Sbjct: 78  KYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHNTSI 137

Query: 201 CFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRI 260
           C V +HL +  ++ +   RN D  +I  R  F        P +I +H+ I+WLGDLNYRI
Sbjct: 138 CVVNSHLAAHIEEYER--RNQDYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRI 195

Query: 261 N-LPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYY 319
             L  EK ++LI +K +  L   DQL  ++     F+G++EG L F PTYKY+  S+ + 
Sbjct: 196 EELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEGFTEGELTFQPTYKYDTGSDDWD 255

Query: 320 GEDPKVGRRNPSWCDRILSYGKGMRLLNYRRN-EIKMSDHRPVTATYMAEVEVFSPRKLQ 378
             +     R P+WCDRIL  GK +  L+Y+ +  +K SDH+PV++ +   V V +     
Sbjct: 256 TSEKC---RAPAWCDRILWKGKNITQLSYQSHMALKTSDHKPVSSVFDIGVRVVAHHHHH 312
>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Length = 316 Back     alignment and structure
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Length = 347 Back     alignment and structure
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Length = 357 Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Length = 282 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X Length = 306 Back     alignment and structure
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A Length = 317 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query412
3mtc_A313 Type II inositol-1,4,5-trisphosphate 5-phosphatas; 100.0
4a9c_A316 Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; 100.0
2xsw_A357 72 kDa inositol polyphosphate 5-phosphatase; inosi 100.0
1i9z_A347 Synaptojanin, phosphatidylinositol phosphate phosp 100.0
2imq_X282 Salivary nitrophorin; ferrous heme, beta-sandwich, 100.0
4gz1_A256 Tyrosyl-DNA phosphodiesterase 2; protein-DNA compl 98.94
3teb_A266 Endonuclease/exonuclease/phosphatase; PSI-biology, 98.88
4fva_A256 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy 98.77
1zwx_A301 SMCL, sphingomyelinase-C; dnase1-like fold, beta-h 98.74
4f1h_A250 Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA com 98.66
3i41_A317 Beta-hemolysin; beta toxin, sphingomyelinase, toxi 98.54
3g6s_A267 Putative endonuclease/exonuclease/phosphatase fami 98.54
3l1w_A257 Uncharacterized protein; APC29019.2, conserved pro 98.53
4gew_A362 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosy 98.49
1ako_A268 Exonuclease III; AP-endonuclease, DNA repair; 1.70 98.44
2ddr_A306 Sphingomyelin phosphodiesterase; DNAse I like fold 98.44
3mpr_A298 Putative endonuclease/exonuclease/phosphatase FAM 98.3
1vyb_A238 ORF2 contains A reverse transcriptase domain; endo 97.83
1wdu_A245 TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA 97.7
2jc4_A256 Exodeoxyribonuclease III; hydrolase, repair phosph 97.65
2o3h_A285 DNA-(apurinic or apyrimidinic site) lyase; APE, en 97.45
2jc5_A259 Exodeoxyribonuclease; hydrolase, repair phosphodie 97.33
4b8c_D727 Glucose-repressible alcohol dehydrogenase transcr 97.21
2a40_B260 Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse 97.15
1hd7_A318 DNA-(apurinic or apyrimidinic site) lyase; DNA rep 97.13
2j63_A467 AP-endonuclease; base excision repair, lyase; 2.48 97.12
3g91_A265 MTH0212, exodeoxyribonuclease; double-strand speci 96.83
2voa_A257 AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP 96.78
2ei9_A240 Non-LTR retrotransposon R1BMKS ORF2 protein; four 96.29
1sr4_B261 CDT B, cytolethal distending toxin protein B; bact 95.99
3ngq_A398 CCR4-NOT transcription complex subunit 6-like; alp 91.65
>3mtc_A Type II inositol-1,4,5-trisphosphate 5-phosphatas; INPP5BA,phosphoinositide 5-phosphatase, inositol signalling, phosphatase, magnesium; HET: PIF; 2.40A {Homo sapiens} PDB: 3n9v_A Back     alignment and structure
Probab=100.00  E-value=9.9e-75  Score=574.02  Aligned_cols=231  Identities=37%  Similarity=0.676  Sum_probs=217.6

Q ss_pred             CCCeEEEEeeehheeeeeeeEecccccccceeeEeEEeeccccccCCeeEEEEEEEECCEEEEEEeeccCCCCCCcchhH
Q 015155          139 RSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELK  218 (412)
Q Consensus       139 ~~~Yv~v~s~qmvGi~L~Vfvr~~l~~~Is~v~~~~V~tG~~G~~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~~~~  218 (412)
                      +..|++|.+.||+||+|+||||+++.++|++|++++||||++|++||||||+|||.+++++|||||||||||+++  .++
T Consensus        76 ~~~Y~~v~s~~lvGl~l~Vfvr~~~~~~i~~v~~~~v~tG~~g~~GNKGaV~ir~~~~~ts~cFVnsHLaA~~~~--~~~  153 (313)
T 3mtc_A           76 DAKYAKVKLIRLVGIMLLLYVKQEHAAYISEVEAETVGTGIMGRMGNKGGVAIRFQFHNTSICVVNSHLAAHIEE--YER  153 (313)
T ss_dssp             TSCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECSGGGTSTTSEEEEEEEEETTEEEEEEEEECCCSGGG--HHH
T ss_pred             CCCEEEEEEechhhhhhhhhhhhhhhhhcceeEeeeecccccccccCCceEEEEEEECCcEEEEEeeccCCCchH--HHH
Confidence            468999999999999999999999999999999999999999999999999999999999999999999999875  589


Q ss_pred             HhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccC-CChHHHHHHHhhhcHHHHHhhhHHHHHHHcCCCccc
Q 015155          219 RNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRIN-LPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDG  297 (412)
Q Consensus       219 Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~-l~~~~v~~lI~~~~~~~Ll~~DQL~~e~~~g~~F~g  297 (412)
                      ||+|+.+|++++.|........|..|.+||+|||+|||||||+ ++.++++++|++++|+.|+++|||+.++++|.+|.|
T Consensus       154 Rn~d~~~I~~~l~f~~~~~~~~~~~i~~~d~vfw~GDLNyRi~~~~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~g~~f~g  233 (313)
T 3mtc_A          154 RNQDYKDICSRMQFCQPDPSLPPLTISNHDVILWLGDLNYRIEELDVEKVKKLIEEKDFQMLYAYDQLKIQVAAKTVFEG  233 (313)
T ss_dssp             HHHHHHHHHHHCCBCCSCSSSCCBCTTSSSEEEEEEECCCCBCSSCHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSSCTT
T ss_pred             HHHHHHHHHHhcccCCCCCccCCccccCCceEEEeccccccccCCCHHHHHHHHhcCCHHHHHHhHHHHHHHHcCCccCC
Confidence            9999999999999975433334668899999999999999996 889999999999999999999999999999999999


Q ss_pred             ccccCcccCCCccccCCCccccCCCCCCCCCCCccccceeecCCCeeEeeeec-cccccCCCCcceeEEEEEEEeeCh
Q 015155          298 WSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRR-NEIKMSDHRPVTATYMAEVEVFSP  374 (412)
Q Consensus       298 f~E~~I~FpPTYKy~~gs~~Y~~~d~~~k~R~PSWcDRIL~~~~~i~~l~Y~s-~el~~SDHrPV~A~f~v~v~v~~~  374 (412)
                      |.|++|+|||||||++|++.|+   +++|+|+|||||||||++++++++.|.+ +++.+||||||+|.|.+++.|+.+
T Consensus       234 f~E~~I~F~PTYKyd~~s~~yd---ts~k~R~PsWcDRIL~~~~~i~~~~Y~s~~~~~~SDHrPV~a~f~~~~~~~~~  308 (313)
T 3mtc_A          234 FTEGELTFQPTYKYDTGSDDWD---TSEKCRAPAWCDRILWKGKNITQLSYQSHMALKTSDHKPVSSVFDIGVRVVAH  308 (313)
T ss_dssp             CBCCCCCSCCCBCBCTTSSSBC---CSTTCCCCBCCEEEEEEESSEEEEEEEECTTCCSSSSCCEEEEEEEEEEEECC
T ss_pred             cccCCcCcCCCccCcCCCcccc---cccCEecccccceEEEecCCeEEEeeeeccCccCCCccCeEEEEEEEEEEeec
Confidence            9999999999999999999996   5779999999999999999999999998 689999999999999999998875
>4a9c_A Phosphatidylinositol-3,4,5-trisphosphate 5-phosph; SGC, signalling, structural genomics consortium stockholm, magnesium binding, hydrolase; HET: B5F; 2.10A {Homo sapiens} PDB: 3nr8_B* Back     alignment and structure
>2xsw_A 72 kDa inositol polyphosphate 5-phosphatase; inositol signalling, SGC stockholm, structural genomics CONS hydrolase; 1.90A {Homo sapiens} Back     alignment and structure
>1i9z_A Synaptojanin, phosphatidylinositol phosphate phosphatase; spsynaptojanin, IPP5C, IP3, IP2,, hydrolase; HET: 2IP; 1.80A {Schizosaccharomyces pombe} SCOP: d.151.1.2 PDB: 1i9y_A* Back     alignment and structure
>2imq_X Salivary nitrophorin; ferrous heme, beta-sandwich, transport protein; HET: HEM; 1.30A {Cimex lectularius} SCOP: d.151.1.2 PDB: 1ntf_A* 1y21_A* 1yjh_A* 1si6_X* Back     alignment and structure
>4gz1_A Tyrosyl-DNA phosphodiesterase 2; protein-DNA complex, DNA repair, 5'-DNA END processing, endonuclease/exonuclease/phosphatase domain; HET: DNA EPE; 1.50A {Mus musculus} PDB: 4gyz_A* 4gz0_A* 4gz2_A* Back     alignment and structure
>3teb_A Endonuclease/exonuclease/phosphatase; PSI-biology, MCSG, midwest center for structural genomics; 2.99A {Leptotrichia buccalis c-1013-b} Back     alignment and structure
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans} Back     alignment and structure
>1zwx_A SMCL, sphingomyelinase-C; dnase1-like fold, beta-hairpin, hydrolase; 1.90A {Listeria ivanovii} SCOP: d.151.1.3 Back     alignment and structure
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B* Back     alignment and structure
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus} PDB: 3i46_A 3i48_A 3i5v_A* 3k55_A Back     alignment and structure
>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis} Back     alignment and structure
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A Back     alignment and structure
>1ako_A Exonuclease III; AP-endonuclease, DNA repair; 1.70A {Escherichia coli} SCOP: d.151.1.1 Back     alignment and structure
>2ddr_A Sphingomyelin phosphodiesterase; DNAse I like folding, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.40A {Bacillus cereus} SCOP: d.151.1.3 PDB: 2dds_A 2ddt_A* 2uyr_X Back     alignment and structure
>3mpr_A Putative endonuclease/exonuclease/phosphatase FAM protein; structural genomics, PSI-2, protein structure initiative; HET: MSE PEG; 1.90A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1vyb_A ORF2 contains A reverse transcriptase domain; endonuclease, APE-1 type, retrotransposition, retrotransposon, transferase; 1.8A {Homo sapiens} SCOP: d.151.1.1 PDB: 2v0s_A 2v0r_A Back     alignment and structure
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1 Back     alignment and structure
>2jc4_A Exodeoxyribonuclease III; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: 1PE; 1.90A {Neisseria meningitidis} Back     alignment and structure
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A Back     alignment and structure
>2jc5_A Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis} Back     alignment and structure
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} Back     alignment and structure
>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D* Back     alignment and structure
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 3u8u_A 2isi_A Back     alignment and structure
>2j63_A AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major} Back     alignment and structure
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A Back     alignment and structure
>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus} Back     alignment and structure
>2ei9_A Non-LTR retrotransposon R1BMKS ORF2 protein; four layered alpha beta sandwich, gene regulation; 2.00A {Bombyx mori} Back     alignment and structure
>1sr4_B CDT B, cytolethal distending toxin protein B; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: d.151.1.1 PDB: 2f2f_B Back     alignment and structure
>3ngq_A CCR4-NOT transcription complex subunit 6-like; alpha/beta sandwich fold, hydrolase; HET: 1PS; 1.80A {Homo sapiens} PDB: 3ngo_A 3ngn_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 412
d1i9za_345 d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission 1e-69
d2imqx1280 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug ( 5e-41
d1zwxa1293 d.151.1.3 (A:41-333) Sphingomyelin phosphodiestera 5e-06
d2ddra1299 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesteras 6e-06
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 345 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  221 bits (564), Expect = 1e-69
 Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 12/263 (4%)

Query: 117 DMSSELALLAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVG 176
           D +      + +      K      YV++ S Q+VG  L I+ + S    I+NV  +   
Sbjct: 77  DPAKRREWESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKK 136

Query: 177 VGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHS 236
            G+ G  GNKG+V++      T  CF+ +HL +G  + DE  R+ D   I     FR   
Sbjct: 137 TGLGGVSGNKGAVAIRFDYEDTGLCFITSHLAAGYTNYDE--RDHDYRTIASGLRFRR-- 192

Query: 237 EIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFD 296
                +SI +H+ ++W GD NYRI+L YE+    I++ + S L E DQL +++  G+ F 
Sbjct: 193 ----GRSIFNHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFP 248

Query: 297 GWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMS 356
            +SE  + F PTYK+++ ++ Y   D     R P+W DRIL  G+ +   +Y+   +  S
Sbjct: 249 FFSELPITFPPTYKFDIGTDIY---DTSDKHRVPAWTDRILYRGE-LVPHSYQSVPLYYS 304

Query: 357 DHRPVTATYMAEVEVFSPRKLQR 379
           DHRP+ ATY A +      K + 
Sbjct: 305 DHRPIYATYEANIVKVDREKKKI 327
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Length = 280 Back     information, alignment and structure
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]} Length = 293 Back     information, alignment and structure
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]} Length = 299 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query412
d1i9za_345 Synaptojanin, IPP5C domain {Fission yeast (Schizos 100.0
d2imqx1280 Salivary nitrophorin {Bedbug (Cimex lectularius) [ 100.0
d2ddra1299 Sphingomyelin phosphodiesterase C {Bacillus cereus 98.78
d1zwxa1293 Sphingomyelin phosphodiesterase C {Listeria ivanov 98.73
d1wdua_228 Endonuclease domain of TRAS1 retrotransposon (ORF2 98.38
d1vyba_236 Endonuclease domain of LINE-1 reverse transcriptas 97.47
d2f1na1250 Cytolethal distending toxin subunit B {Escherichia 97.37
d1sr4b_261 Cytolethal distending toxin subunit B {Haemophilus 96.32
d2a40b1260 Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913 96.02
d1hd7a_275 DNA repair endonuclease Hap1 {Human (Homo sapiens) 92.68
d1akoa_268 DNA-repair enzyme exonuclease III {Escherichia col 92.2
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Inositol polyphosphate 5-phosphatase (IPP5)
domain: Synaptojanin, IPP5C domain
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=7.2e-63  Score=489.00  Aligned_cols=234  Identities=34%  Similarity=0.576  Sum_probs=215.0

Q ss_pred             cCCCCeEEEEeeehheeeeeeeEecccccccceeeEeEEeeccccccCCeeEEEEEEEECCEEEEEEeeccCCCCCCcch
Q 015155          137 KRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDE  216 (412)
Q Consensus       137 ~~~~~Yv~v~s~qmvGi~L~Vfvr~~l~~~Is~v~~~~V~tG~~G~~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~~  216 (412)
                      ..+..|+++.+.+|+|+.|+||+|+++.++|+++.++++++|++|.+||||||+++|.+++++||||||||+||+++  .
T Consensus        97 ~~~~~Y~~v~~~~~~g~~l~vf~r~~~~~~i~~v~~~~~~~g~~g~~gnKGaV~vr~~i~~t~l~fvn~HL~ag~~~--~  174 (345)
T d1i9za_          97 TSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVSGNKGAVAIRFDYEDTGLCFITSHLAAGYTN--Y  174 (345)
T ss_dssp             CSSCCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECCCC----CCEEEEEEEEETTEEEEEEEEECCCCSSC--H
T ss_pred             cCCCCeEEEEEecccCcEEEEEEcchhccccccceeEEEecCcCCcccCCceEEEEEEECCEEEEEEEecccCcccc--h
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999875  5


Q ss_pred             hHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccCCChHHHHHHHhhhcHHHHHhhhHHHHHHHcCCCcc
Q 015155          217 LKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFD  296 (412)
Q Consensus       217 ~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~l~~~~v~~lI~~~~~~~Ll~~DQL~~e~~~g~~F~  296 (412)
                      .+||+|+..|++++.|.      .+..+.++|++||+||||||++++.+.+.+++..++|..|+++|||..+++.+.+|.
T Consensus       175 ~~R~~~~~~i~~~l~~~------~~~~~~~~d~v~~~GDlN~R~~~~~~~~~~~i~~~~~~~l~~~dql~~~~~~~~~~~  248 (345)
T d1i9za_         175 DERDHDYRTIASGLRFR------RGRSIFNHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFP  248 (345)
T ss_dssp             HHHHHHHHHHHHHCCCG------GGCCTTSSSEEEEEEECCCCBSSCHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSSST
T ss_pred             HHHHHHHHHHHHhhccc------cccccccCceeEEeccccccccCchhhhHhhhhccchhHHHHHHHHHhhhhccCccc
Confidence            78999999999998875      234567899999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccCCCccccCCCccccCCCCCCCCCCCccccceeecCCCeeEeeeeccccccCCCCcceeEEEEEEEeeChhh
Q 015155          297 GWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRK  376 (412)
Q Consensus       297 gf~E~~I~FpPTYKy~~gs~~Y~~~d~~~k~R~PSWcDRIL~~~~~i~~l~Y~s~el~~SDHrPV~A~f~v~v~v~~~~k  376 (412)
                      +|.|++|+|||||||+.+++.|+   ++.++|+|||||||||++. +.++.|.+.++.+|||+||+|.|.++|+.+++.|
T Consensus       249 ~~~E~~I~F~PTyk~~~~~~~yd---~~~k~RiPsWcDRIL~~~~-~~~~~Y~s~~~~~SDH~PV~a~f~v~v~~~~~~~  324 (345)
T d1i9za_         249 FFSELPITFPPTYKFDIGTDIYD---TSDKHRVPAWTDRILYRGE-LVPHSYQSVPLYYSDHRPIYATYEANIVKVDREK  324 (345)
T ss_dssp             TCBCCCCCSCCCBCBCTTSSCBC---CSTTCCCCBCCEEEEEESS-CEEEEEEECCCCSSSBCCEEEEEEEEEEEECHHH
T ss_pred             CcccCCCCCCCCCeEECCCCccC---CCCCeeCccccceEEeeCc-eeeeeeeccCCCCCCcccEEEEEEEEEEEECHHH
Confidence            99999999999999999999996   4568999999999999974 7889999999999999999999999999999988


Q ss_pred             hhhhcc
Q 015155          377 LQRALT  382 (412)
Q Consensus       377 l~r~l~  382 (412)
                      .+....
T Consensus       325 ~~~~~~  330 (345)
T d1i9za_         325 KKILFE  330 (345)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            876553
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]} Back     information, alignment and structure
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]} Back     information, alignment and structure
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]} Back     information, alignment and structure
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]} Back     information, alignment and structure
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]} Back     information, alignment and structure