Citrus Sinensis ID: 015195
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 411 | ||||||
| 449448202 | 414 | PREDICTED: adiponectin receptor protein | 0.980 | 0.973 | 0.804 | 0.0 | |
| 449521317 | 414 | PREDICTED: adiponectin receptor protein | 0.980 | 0.973 | 0.804 | 0.0 | |
| 224127168 | 383 | predicted protein [Populus trichocarpa] | 0.922 | 0.989 | 0.843 | 0.0 | |
| 224097246 | 401 | predicted protein [Populus trichocarpa] | 0.953 | 0.977 | 0.811 | 0.0 | |
| 296084692 | 390 | unnamed protein product [Vitis vinifera] | 0.941 | 0.992 | 0.822 | 0.0 | |
| 255568631 | 399 | conserved hypothetical protein [Ricinus | 0.953 | 0.982 | 0.790 | 0.0 | |
| 225458870 | 415 | PREDICTED: adiponectin receptor protein | 0.992 | 0.983 | 0.740 | 0.0 | |
| 359496410 | 497 | PREDICTED: ADIPOR-like receptor CG5315-l | 0.939 | 0.776 | 0.742 | 1e-178 | |
| 122937709 | 400 | hemolysin III-related family protein [Li | 0.929 | 0.955 | 0.744 | 1e-177 | |
| 363814426 | 380 | uncharacterized protein LOC100778227 [Gl | 0.900 | 0.973 | 0.777 | 1e-177 |
| >gi|449448202|ref|XP_004141855.1| PREDICTED: adiponectin receptor protein 2-like isoform 1 [Cucumis sativus] gi|449448204|ref|XP_004141856.1| PREDICTED: adiponectin receptor protein 2-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/404 (80%), Positives = 363/404 (89%), Gaps = 1/404 (0%)
Query: 9 EHMNEASEAMENHGVASSKEGKGRRLWKRVKYQLVEYHALPGYLRDNEFIIGHYRSEWPL 68
E ++E E H SSKEGKG+RLWK+VKYQLVEYHALP YLRDNEFI+GHYR++WP+
Sbjct: 11 EKFKISAETNEGHHKYSSKEGKGKRLWKKVKYQLVEYHALPAYLRDNEFILGHYRADWPM 70
Query: 69 KQTLLSIFTIHNETLNVWTHLIGFFIFLALTIYTAMKAPRVVDLHSL-HIPEVLKNADLH 127
KQTLLSIF+IHNETLNVWTHLIGFF+FL+LTIYTA K P VVD+H L H+P+ L+ ADLH
Sbjct: 71 KQTLLSIFSIHNETLNVWTHLIGFFLFLSLTIYTATKIPDVVDIHPLQHLPDALRKADLH 130
Query: 128 KLQAELLTCLPSLPNLPNLQRLREELKTTLPSMDLLPSLSGWHVMEHLYNCLPERFSHGN 187
KLQ ELLTCLPSLP+ P+LQ+LREELK +PSMD+L SLS WHV+E LYNCLPERFSHGN
Sbjct: 131 KLQEELLTCLPSLPHFPDLQKLREELKIAMPSMDMLSSLSRWHVVELLYNCLPERFSHGN 190
Query: 188 QTEVCVLHSVKEDVANIIAPLMVRPITRWPFFAFLGGAMFCLLTSSACHLLSCHSERMSY 247
QT+ CVL S+KE+VAN+IAPL +RPITRWPFFAFLGGAMFCLL SS CHLLSCHSER+SY
Sbjct: 191 QTDDCVLRSMKEEVANMIAPLAMRPITRWPFFAFLGGAMFCLLASSTCHLLSCHSERVSY 250
Query: 248 IMLRLDYAGIAALISTSFYPLVYYSFMCTPFFCNLYMGFITLLGIATILASLLPVFQTPE 307
IMLRLDYAGIAALISTSFYP VYYSFMC PFFC+LYMGFITLLGIATIL SLLP+FQ+PE
Sbjct: 251 IMLRLDYAGIAALISTSFYPPVYYSFMCYPFFCSLYMGFITLLGIATILVSLLPMFQSPE 310
Query: 308 FRNVRASLFCGMGLSGVAPILHKVILFSHQPEALHTTGYELLMGLFYGLGALVYATRIPE 367
+R RASLF GMGL G+APILHK+ILF PEALHTTGYE+LMG+ YGLGALVYA+RIPE
Sbjct: 311 YRTFRASLFLGMGLCGIAPILHKLILFWGSPEALHTTGYEILMGILYGLGALVYASRIPE 370
Query: 368 RWMPGKFDIAGHSHQLFHILVVAGAYTHYRAGLVYLKWRDMEGC 411
RWMPGKFDIAGHSHQLFHILVVAGAYTHYRAGLVYLKWRD++GC
Sbjct: 371 RWMPGKFDIAGHSHQLFHILVVAGAYTHYRAGLVYLKWRDLQGC 414
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449521317|ref|XP_004167676.1| PREDICTED: adiponectin receptor protein 2-like isoform 1 [Cucumis sativus] gi|449521319|ref|XP_004167677.1| PREDICTED: adiponectin receptor protein 2-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224127168|ref|XP_002320004.1| predicted protein [Populus trichocarpa] gi|222860777|gb|EEE98319.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224097246|ref|XP_002310891.1| predicted protein [Populus trichocarpa] gi|222853794|gb|EEE91341.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|296084692|emb|CBI25834.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255568631|ref|XP_002525289.1| conserved hypothetical protein [Ricinus communis] gi|223535447|gb|EEF37117.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|225458870|ref|XP_002285384.1| PREDICTED: adiponectin receptor protein 2 [Vitis vinifera] gi|302142182|emb|CBI19385.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359496410|ref|XP_002264538.2| PREDICTED: ADIPOR-like receptor CG5315-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|122937709|gb|ABM68566.1| hemolysin III-related family protein [Lilium longiflorum] | Back alignment and taxonomy information |
|---|
| >gi|363814426|ref|NP_001242849.1| uncharacterized protein LOC100778227 [Glycine max] gi|255644752|gb|ACU22878.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 411 | ||||||
| TAIR|locus:2120140 | 385 | HHP4 "heptahelical protein 4" | 0.688 | 0.735 | 0.769 | 2.3e-170 | |
| TAIR|locus:2121808 | 374 | HHP5 "heptahelical protein 5" | 0.661 | 0.727 | 0.75 | 1.4e-112 | |
| TAIR|locus:2149319 | 332 | HHP1 "heptahelical transmembra | 0.484 | 0.599 | 0.502 | 5.9e-74 | |
| TAIR|locus:2126709 | 358 | HHP2 "heptahelical transmembra | 0.472 | 0.541 | 0.474 | 6.8e-67 | |
| TAIR|locus:2047550 | 344 | HHP3 "heptahelical protein 3" | 0.445 | 0.531 | 0.480 | 8.7e-67 | |
| UNIPROTKB|Q32KM7 | 386 | ADIPOR2 "Adiponectin receptor | 0.496 | 0.528 | 0.468 | 8.8e-55 | |
| UNIPROTKB|E2R8Q9 | 386 | ADIPOR2 "Uncharacterized prote | 0.496 | 0.528 | 0.459 | 1.4e-54 | |
| UNIPROTKB|Q86V24 | 386 | ADIPOR2 "Adiponectin receptor | 0.496 | 0.528 | 0.459 | 1.4e-54 | |
| UNIPROTKB|Q5UVJ1 | 386 | ADIPOR2 "Uncharacterized prote | 0.496 | 0.528 | 0.459 | 1.8e-54 | |
| MGI|MGI:93830 | 386 | Adipor2 "adiponectin receptor | 0.496 | 0.528 | 0.459 | 1.8e-54 |
| TAIR|locus:2120140 HHP4 "heptahelical protein 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1200 (427.5 bits), Expect = 2.3e-170, Sum P(2) = 2.3e-170
Identities = 227/295 (76%), Positives = 252/295 (85%)
Query: 117 IPEVLKNADLHKLQAELLTCLPSLPNLPNLQRLREELKTTLPSMDLLPSLSGWHVMEHLY 176
+P V+ DLH LQ L P L +L +L EL LPS S S WHVM+ LY
Sbjct: 103 VPSVV---DLHSLQHRL----PDLLRKTDLHKLHSELMARLPS-----SPSSWHVMDLLY 150
Query: 177 NCLPERFSHGNQTEVCVLHSVKEDVANIIAPLMVRPITRWPFFAFLGGAMFCLLTSSACH 236
NCLPERFSHGN T++CVLHSV+ED+AN+IAPL+ RPITRWPF+AFLGGAMFCLL SS CH
Sbjct: 151 NCLPERFSHGNYTDMCVLHSVREDLANLIAPLIFRPITRWPFYAFLGGAMFCLLASSTCH 210
Query: 237 LLSCHSERMSYIMLRLDYAGIAALISTSFYPLVYYSFMCTPFFCNLYMGFITLLGIATIL 296
LLSCHSER+SYIMLRLDYAGIAALI+TSFYP VYYSFMC PFFCNLY+GFIT+LGIAT+L
Sbjct: 211 LLSCHSERVSYIMLRLDYAGIAALIATSFYPPVYYSFMCDPFFCNLYLGFITILGIATVL 270
Query: 297 ASLLPVFQTPEFRNVRASLFCGMGLSGVAPILHKVILFSHQPEALHTTGYELLMGLFYGL 356
SLLPVFQ+PEFR VRASLF GMG SG+APILHK+I+F QPEALHTTGYE+LMGL YGL
Sbjct: 271 VSLLPVFQSPEFRVVRASLFFGMGFSGLAPILHKLIIFWDQPEALHTTGYEILMGLLYGL 330
Query: 357 GALVYATRIPERWMPGKFDIAGHSHQLFHILVVAGAYTHYRAGLVYLKWRDMEGC 411
GALVYATRIPERWMPGKFDIAGHSHQLFH+LVVAGA+THYRAGLVYLKWRD+EGC
Sbjct: 331 GALVYATRIPERWMPGKFDIAGHSHQLFHVLVVAGAFTHYRAGLVYLKWRDIEGC 385
|
|
| TAIR|locus:2121808 HHP5 "heptahelical protein 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149319 HHP1 "heptahelical transmembrane protein1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2126709 HHP2 "heptahelical transmembrane protein2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2047550 HHP3 "heptahelical protein 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q32KM7 ADIPOR2 "Adiponectin receptor 2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2R8Q9 ADIPOR2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q86V24 ADIPOR2 "Adiponectin receptor protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5UVJ1 ADIPOR2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:93830 Adipor2 "adiponectin receptor 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00007855001 | SubName- Full=Chromosome undetermined scaffold_1102, whole genome shotgun sequence; (412 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 411 | |||
| pfam03006 | 207 | pfam03006, HlyIII, Haemolysin-III related | 3e-41 | |
| COG1272 | 226 | COG1272, COG1272, Predicted membrane protein, hemo | 2e-24 | |
| TIGR01065 | 204 | TIGR01065, hlyIII, channel protein, hemolysin III | 1e-10 | |
| pfam03006 | 207 | pfam03006, HlyIII, Haemolysin-III related | 9e-05 |
| >gnl|CDD|217315 pfam03006, HlyIII, Haemolysin-III related | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 3e-41
Identities = 70/188 (37%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 212 PITRWPFFAFLGGAMFCLLTSSACHLLSCHSE-RMSYIMLRLDYAGIAALISTSFYPLVY 270
P PF + LL S+ HL SCHSE R Y++ +LD++GI LI+ S+ P +
Sbjct: 37 PWEVVPFSIYGLSLFLLLLVSTLYHLFSCHSEGRAKYVLRKLDHSGIYLLIAGSYTPFLL 96
Query: 271 YSFMCTPFFCNLYMGFITLLGIATILASLLPVFQTPEFRNVRASLFCGMGLSGVAPILHK 330
Y+ + + FI L + IL L + FR +R L+ MG G+ PI H
Sbjct: 97 YAL--CGPLGWILLIFIWGLALLGILLKLFWL---KRFRWLRTVLYLLMGWLGIIPIKHL 151
Query: 331 VILFSHQPEALHTTG--YELLMGLFYGLGALVYATRIPERWMPGKFDIAGHSHQLFHILV 388
+ AL G +L G+ Y LGA+ YA R P G FDI GHSHQ+FH+ V
Sbjct: 152 I-------LALGGGGLVLLVLGGVLYTLGAIFYALRFP-----GPFDIWGHSHQIFHLFV 199
Query: 389 VAGAYTHY 396
V GA HY
Sbjct: 200 VLGALCHY 207
|
Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. Length = 207 |
| >gnl|CDD|224191 COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|233258 TIGR01065, hlyIII, channel protein, hemolysin III family | Back alignment and domain information |
|---|
| >gnl|CDD|217315 pfam03006, HlyIII, Haemolysin-III related | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 411 | |||
| KOG0748 | 286 | consensus Predicted membrane proteins, contain hem | 100.0 | |
| PF03006 | 222 | HlyIII: Haemolysin-III related; InterPro: IPR00425 | 100.0 | |
| COG1272 | 226 | Predicted membrane protein, hemolysin III homolog | 100.0 | |
| TIGR01065 | 204 | hlyIII channel protein, hemolysin III family. This | 100.0 | |
| PRK15087 | 219 | hemolysin; Provisional | 100.0 | |
| KOG4243 | 298 | consensus Macrophage maturation-associated protein | 99.7 | |
| PF05875 | 262 | Ceramidase: Ceramidase; InterPro: IPR008901 This e | 96.67 | |
| KOG2970 | 319 | consensus Predicted membrane protein [Function unk | 96.0 | |
| PF04080 | 267 | Per1: Per1-like ; InterPro: IPR007217 A member of | 95.74 | |
| PF13965 | 570 | SID-1_RNA_chan: dsRNA-gated channel SID-1 | 90.82 | |
| PF12036 | 186 | DUF3522: Protein of unknown function (DUF3522); In | 88.7 |
| >KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-67 Score=511.99 Aligned_cols=271 Identities=49% Similarity=0.888 Sum_probs=240.1
Q ss_pred cccceeeeccCCcccccCCcccccccCCCCHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccch
Q 015195 38 VKYQLVEYHALPGYLRDNEFIIGHYRSEWPLKQTLLSIFTIHNETLNVWTHLIGFFIFLALTIYTAMKAPRVVDLHSLHI 117 (411)
Q Consensus 38 ~~~~l~~~~elP~~l~dN~yI~tGYR~~~s~~~cl~SlF~~HNETvNIWTHlig~~~fl~l~~~~~~~~~~~~~~~~~~~ 117 (411)
+..+++++||+|+|+||||||++|||+..|.++|+||+|++||||+|||||++|+++|+.+.++...... .
T Consensus 7 ~~~~l~~~~~lP~~~~dn~yi~~gyR~~~s~~~c~~S~f~~hNEt~NiwTHLlg~i~f~~~~~~~~~~~~----~----- 77 (286)
T KOG0748|consen 7 KRPRLLPWDELPEWLKDNEYILTGYRPGSSFRACFKSIFQWHNETLNIWTHLLGFILFLFLLILFMPRVL----L----- 77 (286)
T ss_pred cccccCChhhCCHHHhcCcceeCccCCCCCHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHccccc----c-----
Confidence 3558999999999999999999999988889999999999999999999999999999999887421100 0
Q ss_pred hhhhhhhhhHHHHHHHhhcCCCCCCCchhHHHHHhhhhcCCcCCcCCCcccchhhhhhhccccccccCCCcchhhhhhhh
Q 015195 118 PEVLKNADLHKLQAELLTCLPSLPNLPNLQRLREELKTTLPSMDLLPSLSGWHVMEHLYNCLPERFSHGNQTEVCVLHSV 197 (411)
Q Consensus 118 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (411)
+..+ +
T Consensus 78 --------------------~~~~---------------------------~---------------------------- 82 (286)
T KOG0748|consen 78 --------------------PVDS---------------------------H---------------------------- 82 (286)
T ss_pred --------------------cccc---------------------------c----------------------------
Confidence 0000 0
Q ss_pred hhhhHhhhcccccCCCCchhHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhHhHHHHHHhhchhhhhhhhhccCc
Q 015195 198 KEDVANIIAPLMVRPITRWPFFAFLGGAMFCLLTSSACHLLSCHSERMSYIMLRLDYAGIAALISTSFYPLVYYSFMCTP 277 (411)
Q Consensus 198 ~~d~~~~i~~~~~~~~~~~~~~if~~~~~~~l~~StlyHlf~~~S~~~~~~~~~lDy~GI~llI~GS~~p~~yy~f~c~~ 277 (411)
. ...+.+|+.+ ++++|++||+++|||++.++.|.++||+||+++|.||++|.+||+|+|.+
T Consensus 83 --------------~--~~~~~lf~~~---~~~~S~~~H~~~~~s~~~~~~~~~lDY~GIs~li~gS~~~~~yy~f~c~~ 143 (286)
T KOG0748|consen 83 --------------L--SEKIFLFFLG---CLLLSSLYHLFSCHSEKVSRFFLKLDYAGISLLIIGSFLPIIYYAFYCHP 143 (286)
T ss_pred --------------c--hHHHHHHHHH---HHHHHHHHHHHhcccHHHHHHHHHccHHhhHHHHHHHHHHHHHHhcccch
Confidence 0 0013445555 33449999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhhHhhhhhhhhhHHHHHHHhcCC-cchhhHHHHHHHHHHHHhh
Q 015195 278 FFCNLYMGFITLLGIATILASLLPVFQTPEFRNVRASLFCGMGLSGVAPILHKVILFSHQ-PEALHTTGYELLMGLFYGL 356 (411)
Q Consensus 278 ~~~~~yl~~i~~l~l~~~~~~l~~~f~~~k~r~lR~~~f~~lg~~~~~P~~~~i~~~g~~-~~~~~~l~~~~~~~~~y~~ 356 (411)
.++.+|+..+..++++++..++.++++++++|.+|+.+|+.+|.++++|++|+++..|+. +.....+.++.+++++|++
T Consensus 144 ~~~~iy~~~~~~lgi~~~~~~l~~~~~~~~~r~~R~~~f~~~~~~~i~P~~h~~~~~g~~~~~~~~~~~~~~~~~~~yi~ 223 (286)
T KOG0748|consen 144 FFRLIYLPIILVLGLLAIFVSLSDKFRTPKRRPLRAGVFLLLGLSGILPLLHRLILFGGRGPEVVIALGYVILMAVLYLL 223 (286)
T ss_pred HHHHHHHHHHHHHHHHHheeechhhhCCccchhhHHHHHHHHHHhhccHhhhheeeecCCccceehhhhHHHHHHHHHHH
Confidence 999999999999999999999999998899999999999999999999999999988875 4567788999999999999
Q ss_pred hhhhhhccCCcccCCCccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 015195 357 GALVYATRIPERWMPGKFDIAGHSHQLFHILVVAGAYTHYRAGLVYLKWRDMEGC 411 (411)
Q Consensus 357 G~~fYa~r~PER~~PG~FD~~G~SHqiwHifVv~g~~~h~~ai~~~~~~r~~~~c 411 (411)
|++||++|+||||+|||||++||||||||++|++|+++|+.+++.++++|++..|
T Consensus 224 ga~fY~~riPER~~PGkfD~~G~SHQifHv~vv~~a~~~~~a~~~~~~~~~~~~~ 278 (286)
T KOG0748|consen 224 GALFYATRIPERWFPGKFDIWGHSHQIFHVLVVLAALFHLEAVLLDYEWRHSHLC 278 (286)
T ss_pred HHHHhhcCCCcccCCCccceeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999843
|
|
| >PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins | Back alignment and domain information |
|---|
| >COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01065 hlyIII channel protein, hemolysin III family | Back alignment and domain information |
|---|
| >PRK15087 hemolysin; Provisional | Back alignment and domain information |
|---|
| >KOG4243 consensus Macrophage maturation-associated protein [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases | Back alignment and domain information |
|---|
| >KOG2970 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [] | Back alignment and domain information |
|---|
| >PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1 | Back alignment and domain information |
|---|
| >PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 411 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 3e-05
Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 48/183 (26%)
Query: 24 ASSKEGKGRRLWKRVKYQLVE---------YHAL-PGYLRDNEFIIGHYRSEWPLKQTLL 73
S ++G W K+ + + L P R + L
Sbjct: 335 ESIRDGLAT--WDNWKHVNCDKLTTIIESSLNVLEPAEYRK------MFDR--------L 378
Query: 74 SIF----TIHNETLNV-WTHLIGFFIFLALTI---YTAMK---APRVVDLHSLHIPEVLK 122
S+F I L++ W +I + + + Y+ ++ + + S+++ +K
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 123 NADLHKLQAELLTCLPSLPNLPNLQRLREELKTTLPSMDLLPSLSGWHVMEHLYNC-LPE 181
+ + L ++ N+ + + P +D H+ HL N PE
Sbjct: 439 LENEYALHRSIVDHY-------NIPKTFDSDDLIPPYLD---QYFYSHIGHHLKNIEHPE 488
Query: 182 RFS 184
R +
Sbjct: 489 RMT 491
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00