Citrus Sinensis ID: 015219

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-

MKKPHISSSLDRTWLPPLISISLLSLLIILTVTFSHSRSSSSSSDFTVSDQILDSRFGQPALPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLHYIRWDSPPKQHPMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDENLLKRSNNRFTPGGWCVGNSAFGKDPCLVYGNPYAIKPSVNSKTLEKLIVKLLDPEIFRSKQCK

ccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHHHHccccccEEEEccccccccccHHHHHHHHHcccccccEEEccccccccccEEEcccccccccccccccccEEccccccccccccccccccEEEEcHHHHHHHHHccccHHHHHHHHHccccccccHHHHHHHHcccccccccccccEEEEEcccccccccccccHHHHHHHHHccccEEEccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccc

cccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHcccEEEEcccccEEcccHHHHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHcccccccccccccccccHHHccccEEEEccccEEEccccEEEEcccccccccEEEEccccEEEEEcHHHEEEEccccccHHHHHHHHHcccccccccEEEEEEccccccccccccccEEEEcccccccccccccHHHHHHHHHcccHHHHHcccccHHHHHHHHHHHHcccccccccccEccccccccccccccccccEcccccHHHHHHHHHHHHHccccccccccc

mkkphisssldrtwlpplisISLLSLLIILTVTfshsrssssssdftvsdqildsrfgqpalpRLAYLisgtkgdgaRVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKAdlvtykgptMIAATLHAVAILLKQAkdwdwfinlsasdyplmsqdDILHIFSYLPKYLNFLEHTSsigwkeyqrarpiiidpglyhpkksgvfwakekrsmpasfKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNflsspegyfhsvicnhkdyqnttvnhdlhyirwdsppkqhpmtltlkHFDDmvrsgapfarkfakddpvlnkidenllkrsnnrftpggwcvgnsafgkdpclvygnpyaikpsvnsKTLEKLIVKLldpeifrskqck

mkkphisssldrtwlpPLISISLLSLLIILTVTfshsrssssssdfTVSDQILDSRFGQPALPRLAYLisgtkgdgaRVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKyvksekvirdfknvMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLHYIRWDSPPKQHPMTLTLKHFDDMVRSGAPFarkfakddpvlnKIDENLLKRSNNRFTPGGWCVGNSAFGKDPCLVYGNPYaikpsvnskTLEKLIVklldpeifrskqck

MKKPHISSSLDRTWlpplisisllslliilTVTFshsrssssssDFTVSDQILDSRFGQPALPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLHYIRWDSPPKQHPMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDENLLKRSNNRFTPGGWCVGNSAFGKDPCLVYGNPYAIKPSVNSKTLEKLIVKLLDPEIFRSKQCK

***********RTWLPPLISISLLSLLIILTVTFS****************ILDSRFGQPALPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLHYIRWDSP****PMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDENLLKRSNNRFTPGGWCVGNSAFGKDPCLVYGNPYAIKPSVNSKTLEKLIVKLLDPEIF******

************TWLPPLISISLLSLLIILTVTFSHSRS**********************LPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLHYIRWDSPPKQHPMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDENLLKRSNNRFTPGGWCV*********CLVYGNPYAIKPSVNSKTLEKLIVKLLDPEI*RS*QC*

*********LDRTWLPPLISISLLSLLIILTVTF*************VSDQILDSRFGQPALPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLHYIRWDSPPKQHPMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDENLLKRSNNRFTPGGWCVGNSAFGKDPCLVYGNPYAIKPSVNSKTLEKLIVKLLDPEIFRSKQCK

*******SSLDRTWLPPLISISLLSLLIILTVTFSHSRSSSSSSDFTVSDQILDSRFGQPALPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLHYIRWDSPPKQHPMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDENLLKRSNNRFTPGGWCVGNSAFGKDPCLVYGNPYAIKPSVNSKTLEKLIVKLLDPE******C*

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		411	2.2.26 [Sep-21-2011]
Q9EPI0		864	Xylosyltransferase 2 OS=R	yes	no	0.583	0.277	0.293	2e-17
Q5QQ50		865	Xylosyltransferase 2 OS=C	yes	no	0.552	0.262	0.288	2e-17
Q5QQ51		865	Xylosyltransferase 2 OS=P	yes	no	0.552	0.262	0.296	3e-17
Q9H1B5		865	Xylosyltransferase 2 OS=H	yes	no	0.552	0.262	0.296	7e-17
Q5QQ55		848	Xylosyltransferase OS=Cio	yes	no	0.710	0.344	0.257	7e-17
Q9EPL0		865	Xylosyltransferase 2 OS=M	yes	no	0.552	0.262	0.292	7e-17
Q5QQ49		867	Xylosyltransferase 2 OS=B	yes	no	0.503	0.238	0.302	9e-17
Q86Y38		959	Xylosyltransferase 1 OS=H	no	no	0.562	0.240	0.266	2e-16
Q5QQ57		945	Xylosyltransferase 1 OS=P	no	no	0.562	0.244	0.266	2e-16
Q5QQ56		950	Xylosyltransferase 1 OS=C	no	no	0.644	0.278	0.241	9e-16

>sp\|Q9EPI0\|XYLT2_RAT Xylosyltransferase 2 OS=Rattus norvegicus GN=Xylt2 PE=2 SV=1	Back alignment and function desciption

 Score = 90.9 bits (224), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 135/262 (51%), Gaps = 22/262 (8%)

Query: 51  QILDSRFGQPA---LPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASD--GE 105
           Q  + R  QP    L R+AY++        ++KR+L+AVYH  +++ +H+D  ++    E
Sbjct: 217 QWEEVRAQQPVSGPLVRIAYMLVVHGRAVRQLKRLLKAVYHEEHFFYIHVDKRSNYLYRE 276

Query: 106 RLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAK-DWDWFIN 164
            +ELA++         + NV V     +  + G +++   L ++  LL+     WD+FIN
Sbjct: 277 VVELAQH---------YDNVRVTPWRMVTIWGGASLLRMYLRSMKDLLETPGWTWDFFIN 327

Query: 165 LSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVF 224
           LSA+DYP  + ++++   S   +  NFL+   S G    +  +   +D  L+H   S + 
Sbjct: 328 LSATDYPTRTNEELVAFLSK-NRDKNFLK---SHGRDNSRFIKKQGLD-RLFHECDSHM- 381

Query: 225 WAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSV 284
           W   +R +PA   +  GS W VLTRSF+E+ ++  D L   L  +YT  L   E +FH+V
Sbjct: 382 WRLGERQIPAGIVVDGGSDWFVLTRSFVEYVVYTEDPLVAQLRQFYTYTLLPAESFFHTV 441

Query: 285 ICNHKDYQNTTVNHDLHYIRWD 306
           + N    + + V+++L    W+
Sbjct: 442 LENSPACE-SLVDNNLRVTNWN 462

Probably catalyzes the first step in biosynthesis of glycosaminoglycan. Transfers D-xylose from UDP-D-xylose to specific serine residues of the core protein. Initial enzyme in the biosynthesis of chondroitin sulfate and dermatan sulfate proteoglycans in fibroblasts and chondrocytes.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 2EC: 6

>sp\|Q5QQ50\|XYLT2_CANFA Xylosyltransferase 2 OS=Canis familiaris GN=XYLT2 PE=2 SV=1	Back alignment and function description

>sp\|Q5QQ51\|XYLT2_PANTR Xylosyltransferase 2 OS=Pan troglodytes GN=XYLT2 PE=2 SV=1	Back alignment and function description

>sp\|Q9H1B5\|XYLT2_HUMAN Xylosyltransferase 2 OS=Homo sapiens GN=XYLT2 PE=2 SV=2	Back alignment and function description

>sp\|Q5QQ55\|XYLT_CIOIN Xylosyltransferase OS=Ciona intestinalis GN=xt PE=2 SV=1	Back alignment and function description

>sp\|Q9EPL0\|XYLT2_MOUSE Xylosyltransferase 2 OS=Mus musculus GN=Xylt2 PE=2 SV=3	Back alignment and function description

>sp\|Q5QQ49\|XYLT2_BOVIN Xylosyltransferase 2 OS=Bos taurus GN=XYLT2 PE=2 SV=1	Back alignment and function description

>sp\|Q86Y38\|XYLT1_HUMAN Xylosyltransferase 1 OS=Homo sapiens GN=XYLT1 PE=1 SV=1	Back alignment and function description

>sp\|Q5QQ57\|XYLT1_PANTR Xylosyltransferase 1 OS=Pan troglodytes GN=XYLT1 PE=2 SV=1	Back alignment and function description

>sp\|Q5QQ56\|XYLT1_CANFA Xylosyltransferase 1 OS=Canis familiaris GN=XYLT1 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		411
225440332		465	PREDICTED: xylosyltransferase 2-like [Vi	1.0	0.883	0.773	0.0
255573613		389	acetylglucosaminyltransferase, putative	0.856	0.904	0.821	1e-173
363814302		398	uncharacterized protein LOC100813028 pre	0.854	0.881	0.792	1e-171
224092578		417	predicted protein [Populus trichocarpa]	1.0	0.985	0.724	1e-170
449439996		418	PREDICTED: xylosyltransferase-like [Cucu	0.995	0.978	0.678	1e-165
449531884		418	PREDICTED: LOW QUALITY PROTEIN: xylosylt	0.995	0.978	0.678	1e-165
116794047		424	unknown [Picea sitchensis]	0.973	0.943	0.647	1e-159
357469353		419	Xylosyltransferase [Medicago truncatula]	0.856	0.840	0.718	1e-156
302764452		422	glycosyltransferase CAZy family 14 [Sela	0.978	0.952	0.596	1e-149
302754852		410	glycosyltransferase CAZy family GT14 [Se	0.956	0.958	0.622	1e-149

>gi\|225440332\|ref\|XP_002269924.1\| PREDICTED: xylosyltransferase 2-like [Vitis vinifera]	Back alignment and taxonomy information

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/419 (77%), Positives = 366/419 (87%), Gaps = 8/419 (1%)

Query: 1   MKKPHISSSLDRTWLPPLISISLLSLLIILTVTFSHSRSSSSS--SDFTVSDQILDSRFG 58
           MK+       DR W PPLI  S+LSL+++L+V+    +SSSS+  S F     + +S FG
Sbjct: 47  MKRTQPRICFDRKWFPPLIFGSVLSLILLLSVSLGRVKSSSSTDFSRFDPKSTVYESNFG 106

Query: 59  Q------PALPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKY 112
                  P LPR AY+ISGTKGDGAR++RVLQAVYHP NYY+LHLDLEASD ERLELAKY
Sbjct: 107 SESRSGLPKLPRFAYMISGTKGDGARLRRVLQAVYHPRNYYLLHLDLEASDAERLELAKY 166

Query: 113 VKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPL 172
            KSE VI++FKNVMV+GKA+LVTYKGPTMIA+TLHA++I LKQAKDWDWFINLSASDYPL
Sbjct: 167 AKSEAVIKEFKNVMVVGKANLVTYKGPTMIASTLHAISIFLKQAKDWDWFINLSASDYPL 226

Query: 173 MSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSM 232
           MSQDD+LHIFSYLP+ LNFLEHTS+IGWKEYQRARPIIIDPGLYH KKSGVFWAKEKR M
Sbjct: 227 MSQDDLLHIFSYLPRDLNFLEHTSNIGWKEYQRARPIIIDPGLYHSKKSGVFWAKEKRVM 286

Query: 233 PASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQ 292
           PASFKLFMGSAWVVLT+SFLEFC+WGWDNLPRTLLMYYTN LSSPEGYFH+VICNHKDYQ
Sbjct: 287 PASFKLFMGSAWVVLTKSFLEFCVWGWDNLPRTLLMYYTNVLSSPEGYFHTVICNHKDYQ 346

Query: 293 NTTVNHDLHYIRWDSPPKQHPMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDENLLKR 352
           NTTVNHDLHYIRWD+PPKQHP+TLT++HF+DMV SGAPFARKFAKDDPVLNKID+ LLKR
Sbjct: 347 NTTVNHDLHYIRWDNPPKQHPITLTVEHFNDMVNSGAPFARKFAKDDPVLNKIDKELLKR 406

Query: 353 SNNRFTPGGWCVGNSAFGKDPCLVYGNPYAIKPSVNSKTLEKLIVKLLDPEIFRSKQCK 411
            + +FTPGGWCVGNSA  KDPC+VYG+P +IKP++NS+ LEKLIVKLLD E FRSKQCK
Sbjct: 407 LDGQFTPGGWCVGNSASVKDPCVVYGSPNSIKPTINSRRLEKLIVKLLDFENFRSKQCK 465

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255573613\|ref\|XP_002527729.1\| acetylglucosaminyltransferase, putative [Ricinus communis] gi\|223532870\|gb\|EEF34642.1\| acetylglucosaminyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|363814302\|ref\|NP_001242791.1\| uncharacterized protein LOC100813028 precursor [Glycine max] gi\|255647086\|gb\|ACU24011.1\| unknown [Glycine max]	Back alignment and taxonomy information

>gi\|224092578\|ref\|XP_002309670.1\| predicted protein [Populus trichocarpa] gi\|222855646\|gb\|EEE93193.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449439996\|ref\|XP_004137771.1\| PREDICTED: xylosyltransferase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449531884\|ref\|XP_004172915.1\| PREDICTED: LOW QUALITY PROTEIN: xylosyltransferase-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|116794047\|gb\|ABK26987.1\| unknown [Picea sitchensis]	Back alignment and taxonomy information

>gi\|357469353\|ref\|XP_003604961.1\| Xylosyltransferase [Medicago truncatula] gi\|355506016\|gb\|AES87158.1\| Xylosyltransferase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|302764452\|ref\|XP_002965647.1\| glycosyltransferase CAZy family 14 [Selaginella moellendorffii] gi\|300166461\|gb\|EFJ33067.1\| glycosyltransferase CAZy family 14 [Selaginella moellendorffii]	Back alignment and taxonomy information

>gi\|302754852\|ref\|XP_002960850.1\| glycosyltransferase CAZy family GT14 [Selaginella moellendorffii] gi\|300171789\|gb\|EFJ38389.1\| glycosyltransferase CAZy family GT14 [Selaginella moellendorffii]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		411
TAIR\|locus:505006303		384	AT2G37585 [Arabidopsis thalian	0.705	0.755	0.757	1.4e-131
TAIR\|locus:2147880		434	AT5G15050 [Arabidopsis thalian	0.856	0.811	0.627	1.6e-125
TAIR\|locus:2178047		447	AT5G39990 [Arabidopsis thalian	0.856	0.787	0.619	2.1e-125
TAIR\|locus:2020748		447	AT1G03520 [Arabidopsis thalian	0.849	0.780	0.626	9.2e-123
TAIR\|locus:2125502		448	AT4G03340 [Arabidopsis thalian	0.861	0.790	0.617	4.1e-120
TAIR\|locus:2124009		421	AT4G27480 [Arabidopsis thalian	0.846	0.826	0.586	1.6e-116
TAIR\|locus:2087125		424	AT3G15350 [Arabidopsis thalian	0.839	0.813	0.585	1.8e-112
TAIR\|locus:2037065		423	AT1G53100 [Arabidopsis thalian	0.832	0.808	0.551	2e-102
TAIR\|locus:2096399		378	UNE7 "unfertilized embryo sac	0.705	0.767	0.591	2.2e-101
TAIR\|locus:2026356		395	AT1G71070 [Arabidopsis thalian	0.866	0.901	0.505	2.8e-98

TAIR\|locus:505006303 AT2G37585 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1209 (430.6 bits), Expect = 1.4e-131, Sum P(2) = 1.4e-131
 Identities = 222/293 (75%), Positives = 260/293 (88%)

Query:    62 LPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRD 121
             +PR AYL++GTKGDG RVKR+L+A++HP NYY+LHLDLEASD ER+ELAKYV+SEK  + 
Sbjct:    56 IPRFAYLVTGTKGDGKRVKRLLKAIHHPRNYYLLHLDLEASDEERMELAKYVRSEK--KK 113

Query:   122 FKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHI 181
             F+NVMV+G ADLVT KGPTM+A+TLH VAILLK+AKDWDWFINLSASDYPLM QDDILHI
Sbjct:   114 FENVMVMGLADLVTEKGPTMLASTLHGVAILLKKAKDWDWFINLSASDYPLMPQDDILHI 173

Query:   182 FSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMG 241
             FSYLP+YLNF+EHTS+IGWKE QRARPIIIDPG YH KKSGVFWAKE+RS+PASFKLFMG
Sbjct:   174 FSYLPRYLNFIEHTSNIGWKENQRARPIIIDPGFYHLKKSGVFWAKERRSLPASFKLFMG 233

Query:   242 SAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLH 301
             S  V LTR FLEFCIWGWDNLPRTLLMYYTNFL S EGYF +V+CN+KDYQNTTVNHDLH
Sbjct:   234 STSVALTRPFLEFCIWGWDNLPRTLLMYYTNFLLSSEGYFQTVVCNNKDYQNTTVNHDLH 293

Query:   302 YIRWDSPPKQHPMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDENLLKRSN 354
             Y +WD P +Q  + +T+++F DMV+SGAPFAR+F +DD VL+KID  LL +++
Sbjct:   294 YTKWD-PLQQRTLNVTVENFRDMVQSGAPFAREFREDDLVLDKIDIELLGQTD 345

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008375 "acetylglucosaminyltransferase activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016051 "carbohydrate biosynthetic process" evidence=ISS

TAIR\|locus:2147880 AT5G15050 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2178047 AT5G39990 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2020748 AT1G03520 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2125502 AT4G03340 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2124009 AT4G27480 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2087125 AT3G15350 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2037065 AT1G53100 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2096399 UNE7 "unfertilized embryo sac 7" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2026356 AT1G71070 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00021304001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (344 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		411
PLN03183		421	PLN03183, PLN03183, acetylglucosaminyltransferase	0.0
pfam02485		242	pfam02485, Branch, Core-2/I-Branching enzyme	4e-74

>gnl\|CDD\|178725 PLN03183, PLN03183, acetylglucosaminyltransferase family protein; Provisional	Back alignment and domain information

 Score =  517 bits (1333), Expect = 0.0
 Identities = 226/424 (53%), Positives = 294/424 (69%), Gaps = 24/424 (5%)

Query: 7   SSSLDRTWLPPLISISLLSLLIILT-----------------VTFSHSRSSSSSSDFTVS 49
           S ++++ W+ PL+  SL+ + ++ T                   F  SR++ +  +F  S
Sbjct: 3   SVNVEKRWVFPLVITSLVCVFLLATSFNMGLVSSLRTINSIFSIFPLSRTNQTRLEFAES 62

Query: 50  D--QILDSRFGQPALPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERL 107
              Q       Q  LPR AYL+SG+KGD  ++ R L+A+YHP N YV+HLDLE+   ERL
Sbjct: 63  KVNQSPHPPPVQDKLPRFAYLVSGSKGDLEKLWRTLRALYHPRNQYVVHLDLESPAEERL 122

Query: 108 ELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSA 167
           ELA  V+++ +     NV +I KA+LVTY+GPTM+A TLHA AILLK++KDWDWFINLSA
Sbjct: 123 ELASRVENDPMFSKVGNVYMITKANLVTYRGPTMVANTLHACAILLKRSKDWDWFINLSA 182

Query: 168 SDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAK 227
           SDYPL++QDD++H FS L + LNF+EHTS +GWKE +RA P+IIDPGLY   KS ++W  
Sbjct: 183 SDYPLVTQDDLIHTFSTLDRNLNFIEHTSQLGWKEEKRAMPLIIDPGLYSTNKSDIYWVT 242

Query: 228 EKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICN 287
            +RS+P +FKLF GSAW+VL+RSF+E+CIWGWDNLPRTLLMYYTNF+SSPEGYFH+VICN
Sbjct: 243 PRRSLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYTNFVSSPEGYFHTVICN 302

Query: 288 HKDYQNTTVNHDLHYIRWDSPPKQHPMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDE 347
             ++  T VNHDLHYI WD+PPKQHP TL+L   + M+ SGA FARKF +DDPVL+KID+
Sbjct: 303 VPEFAKTAVNHDLHYISWDNPPKQHPHTLSLNDTEKMIASGAAFARKFRRDDPVLDKIDK 362

Query: 348 NLLKRSNNRFTPGGWCVGNSAFGKDPCLVYGNPYAIKPSVNSKTLEKLIVKLLDPEIFRS 407
            LL R N  FTPGGWC      GK  C   G+P  IKP   ++ L+ L+ +L+       
Sbjct: 363 ELLGRKNGSFTPGGWCS-----GKPKCSRVGDPAKIKPGPGAQRLKGLVSRLVLEAKLGQ 417

Query: 408 KQCK 411
            QCK
Sbjct: 418 NQCK 421

Length = 421

>gnl\|CDD\|217062 pfam02485, Branch, Core-2/I-Branching enzyme	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		411
PLN03183		421	acetylglucosaminyltransferase family protein; Prov	100.0
KOG0799		439	consensus Branching enzyme [Carbohydrate transport	100.0
PF02485		244	Branch: Core-2/I-Branching enzyme; InterPro: IPR00	100.0
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	94.45
TIGR03472		373	HpnI hopanoid biosynthesis associated glycosyl tra	88.56
PRK11204		420	N-glycosyltransferase; Provisional	88.07
TIGR03111		439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	85.92
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	85.89
PRK14716		504	bacteriophage N4 adsorption protein B; Provisional	84.31
cd06439		251	CESA_like_1 CESA_like_1 is a member of the cellulo	83.12
PTZ00260		333	dolichyl-phosphate beta-glucosyltransferase; Provi	81.99
cd06437		232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	80.45

>PLN03183 acetylglucosaminyltransferase family protein; Provisional	Back alignment and domain information

Probab=100.00  E-value=3.4e-116  Score=893.72  Aligned_cols=397  Identities=56%  Similarity=1.030  Sum_probs=366.9

Q ss_pred             CCccchhHHHHHHHHHHHHHHHhh---h-cCCC-------------CCCCCCCCcccc-cccc-cCCCCCCCCcEEEEEE
Q 015219           10 LDRTWLPPLISISLLSLLIILTVT---F-SHSR-------------SSSSSSDFTVSD-QILD-SRFGQPALPRLAYLIS   70 (411)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~-------------~~~~~~~~~~~~-~~~~-~~~~~~~~~~iAYlIl   70 (411)
                      .++||++|++++++++++|+++++   + ++++             .+++.+.|++++ .+.+ ..+..++||||||||+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~AYLI~   85 (421)
T PLN03183          6 VEKRWVFPLVITSLVCVFLLATSFNMGLVSSLRTINSIFSIFPLSRTNQTRLEFAESKVNQSPHPPPVQDKLPRFAYLVS   85 (421)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhhcccCCCccccccccccccccccccccccccccccCCCCCCCCCCCCCCeEEEEEE
Confidence            478999999999999988766443   1 1111             133344566766 3222 1234556999999999


Q ss_pred             ecCCCHHHHHHHHHHHcCCCCEEEEEEeCCCChHHHHHHHHhhhhhccccccCceEEeCcceeeeeCCccHHHHHHHHHH
Q 015219           71 GTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPTMIAATLHAVA  150 (411)
Q Consensus        71 ~hk~d~~~l~RLl~aLyhp~n~y~IHvD~ks~~~~~~~l~~~v~~~~~~~~~~NV~vv~~~~~V~wgg~S~V~AtL~~~~  150 (411)
                      ||++|.++++|||++||||+|+||||+|+||+..++++++..++.+|++.+++||+|+++++.|+|||+|||+|||+||+
T Consensus        86 ~h~~d~~~l~RLL~aLYhprN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~vl~k~~~V~WGG~S~V~AtL~~m~  165 (421)
T PLN03183         86 GSKGDLEKLWRTLRALYHPRNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVYMITKANLVTYRGPTMVANTLHACA  165 (421)
T ss_pred             ecCCcHHHHHHHHHHhcCCCceEEEEecCCCChHHHHHHHHHhhccchhhccCcEEEEecceeeccCChHHHHHHHHHHH
Confidence            99889999999999999999999999999999999999999999989999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcEEEEecCCcccccChhHHHHHHccCCCccceEeeecCCCCcccccccccccCCCCccCCCCcceeccccC
Q 015219          151 ILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKR  230 (411)
Q Consensus       151 ~lL~~~~~wdyfi~LSgsDyPL~t~~~l~~~fs~~~~~~NFIe~~~~~~wk~~~R~~~~i~dpgly~~~~~~~~~~~~kR  230 (411)
                      .||+.+.+|||||||||+||||+||+||++.|+++|+|+|||++++..+|++++|+++++++||+|..+++.++|.+++|
T Consensus       166 ~LL~~~~~WDyfinLSGsDyPLkTqdelI~~F~~~nr~~NFI~~~s~~~wk~~~r~~~~i~~pgl~~~~ks~~~~~~~~R  245 (421)
T PLN03183        166 ILLKRSKDWDWFINLSASDYPLVTQDDLIHTFSTLDRNLNFIEHTSQLGWKEEKRAMPLIIDPGLYSTNKSDIYWVTPRR  245 (421)
T ss_pred             HHHhhCCCCCEEEEccCCcccccCHHHHHHHHHhCCCCceeeecccccccchhhhcceEEecCceeecccchhhhhhhhc
Confidence            99998899999999999999999999988888889999999999988999999999999999999988888889999999


Q ss_pred             CCCCcceeeecceeeeecHHHHHHhhhccCCchHHHHHhhcCCCCCCCchhhhhhhcCcccccccccCceeEEecCCCCC
Q 015219          231 SMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKDYQNTTVNHDLHYIRWDSPPK  310 (411)
Q Consensus       231 ~~P~~~~l~~GS~W~~LsR~fvey~i~~~dn~p~~ll~yf~~~~~pdE~yFqTvl~Ns~~f~~t~vn~nLRyi~W~~~~~  310 (411)
                      .+|.++++|+||+|++|||+|||||+++|||+|++++|||+++++|||+|||||+||+++|+++++|+|||||+|+++++
T Consensus       246 ~~P~~~~lf~GS~W~sLSR~fvey~l~~~dnlpr~ll~y~~~t~~pdE~fFqTVl~NS~~f~~t~vn~nLRyI~W~~~~~  325 (421)
T PLN03183        246 SLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYTNFVSSPEGYFHTVICNVPEFAKTAVNHDLHYISWDNPPK  325 (421)
T ss_pred             cCCccccccCCCceEEecHHHHHHHHhcccchHHHHHHHHhcCCCCchHHHHHHHhhcccccccccCCceeEEecCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCcccCHHHHHHHHcCCCcEEeccCCChHHHHHHHHHHhccCCCCCCCCeeeecCCCCCCCCccccCCCCccCCCcchH
Q 015219          311 QHPMTLTLKHFDDMVRSGAPFARKFAKDDPVLNKIDENLLKRSNNRFTPGGWCVGNSAFGKDPCLVYGNPYAIKPSVNSK  390 (411)
Q Consensus       311 ~~P~~l~~~D~~~l~~S~alFARKF~~d~~vLd~Id~~ll~r~~~~~~~g~w~~~~~~~~~~~c~~~g~~~~~~pg~~~~  390 (411)
                      +||++|+++||++|++|+++|||||+.|++|||+||+++++|..++++|||||.|     .||||+|||+++|||||||+
T Consensus       326 ~~P~~l~~~D~~~l~~S~~lFARKFd~d~~vl~~Id~~ll~r~~~~~~~g~wc~~-----~~~c~~~~~~~~~~p~~~~~  400 (421)
T PLN03183        326 QHPHTLSLNDTEKMIASGAAFARKFRRDDPVLDKIDKELLGRKNGSFTPGGWCSG-----KPKCSRVGDPAKIKPGPGAQ  400 (421)
T ss_pred             CCCcccCHHHHHHHHhCCCccccCCCCChHHHHHHHHHHhCCCCCCccCCcccCC-----CCcccccCCcCccCCCcHHH
Confidence            9999999999999999999999999999999999999999999999999999986     57999999999999999999


Q ss_pred             HHHHHHHHhcCCCCccCCCCC
Q 015219          391 TLEKLIVKLLDPEIFRSKQCK  411 (411)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~  411 (411)
                      ||++||++||++++||++||+
T Consensus       401 ~~~~~~~~~~~~~~~~~~~c~  421 (421)
T PLN03183        401 RLKGLVSRLVLEAKLGQNQCK  421 (421)
T ss_pred             HHHHHHHHHhchhccccccCC
Confidence            999999999999999999996

>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI	Back alignment and domain information

>PRK11204 N-glycosyltransferase; Provisional	Back alignment and domain information

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>PRK14716 bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily	Back alignment and domain information

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional	Back alignment and domain information

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		411
3otk_A		391	Structure And Mechanisim Of Core 2 Beta1,6-N- Acety		3e-11
2gak_A		391	X-ray Crystal Structure Of Murine Leukocyte-type Co		7e-11

>pdb|3OTK|A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase Length = 391

Back alignment and structure

Iteration: 1

Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 59/261 (22%), Positives = 111/261 (42%), Gaps = 39/261 (14%) Query: 81 RVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGPT 140 R+L+A+Y P N+Y +H+D +A E + + + F NV V + + V Y T Sbjct: 101 RLLRAIYMPQNFYCIHVDRKA------EESFLAAVQGIASCFDNVFVASQLESVVYASWT 154 Query: 141 MIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGW 200 + A L+ + L + +W + INLS D+P+ + +I+ N Sbjct: 155 RVKADLNCMKDLYRMNANWKYLINLSGMDFPIKTNLEIVRKLKCSTGENNLETEKMPPNK 214 Query: 201 KEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWD 260 +E + R ++D L + +G+ K P LF GSA+ V+TR ++ + + + Sbjct: 215 EERWKKRYAVVDGKLTN---TGIV----KAPPPLKTPLFSGSAYFVVTREYVGYVL---E 264 Query: 261 NLPRTLLMYYTNFLSSPEGYFHSVIC----------NHKDYQNTTVNHDLHYIRWDSPPK 310 N LM + SP+ + + I + Y + +N +++W Sbjct: 265 NENIQKLMEWAQDTYSPDEFLWATIQRIPEVPGSFPSSNKYDLSDMNAIARFVKW----- 319 Query: 311 QHPMTLTLKHFDDMVRSGAPF 331 ++F+ V +GAP+ Sbjct: 320 --------QYFEGDVSNGAPY 332

PyMOL of 3otk

>pdb|2GAK|A Chain A, X-ray Crystal Structure Of Murine Leukocyte-type Core 2 B1,6-n- Acetylglucosaminyltransferase (c2gnt-l) Length = 391

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		411
2gak_A		391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	2e-69
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* Length = 391	Back alignment and structure

 Score =  223 bits (570), Expect = 2e-69
 Identities = 67/320 (20%), Positives = 117/320 (36%), Gaps = 44/320 (13%)

Query: 60  PALPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVI 119
                +AY I         + R+L+A+Y P N+Y +H+D +A +     +          
Sbjct: 81  EVGFPIAYSIV-VHHKIEMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIAS----- 134

Query: 120 RDFKNVMVIGKADLVTYKGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDIL 179
             F NV V  + + V Y   T + A L+ +  L +   +W + INL   D+P+ +  +I+
Sbjct: 135 -CFDNVFVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIV 193

Query: 180 HIFSYLPKYLNFLEHTSSIGWKEYQRARPIIIDPGLYHPKKSGVFWAKEKRSMPASFKLF 239
                     N          +E  + R  ++D  L +           K   P    LF
Sbjct: 194 RKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTG-------IVKAPPPLKTPLF 246

Query: 240 MGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNHKD--------- 290
            GSA+ V+TR ++ + +   +N     LM +     SP+ +  + I    +         
Sbjct: 247 SGSAYFVVTREYVGYVL---ENENIQKLMEWAQDTYSPDEFLWATIQRIPEVPGSFPSSN 303

Query: 291 -YQNTTVNHDLHYIRWD-----------SPPKQHPM-----TLTLKHFDDMVRSGAPFAR 333
            Y  + +N    +++W             PP                   M+R    FA 
Sbjct: 304 KYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWMLRQHHLFAN 363

Query: 334 KFAKD-DPVLNKIDENLLKR 352
           KF  D DP   +  +  L+R
Sbjct: 364 KFDMDVDPFAIQCLDEHLRR 383

PyMOL of 2gak

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		411
2gak_A		391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	100.0
3bcv_A		240	Putative glycosyltransferase protein; protein stru	84.13

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*	Back alignment and structure

Probab=100.00  E-value=4.3e-64  Score=511.60  Aligned_cols=279  Identities=23%  Similarity=0.336  Sum_probs=239.2

Q ss_pred             CCCCcEEEEEEecCCCHHHHHHHHHHHcCCCCEEEEEEeCCCChHHHHHHHHhhhhhccccccCceEEeCcceeeeeCCc
Q 015219           60 PALPRLAYLISGTKGDGARVKRVLQAVYHPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVTYKGP  139 (411)
Q Consensus        60 ~~~~~iAYlIl~hk~d~~~l~RLl~aLyhp~n~y~IHvD~ks~~~~~~~l~~~v~~~~~~~~~~NV~vv~~~~~V~wgg~  139 (411)
                      +.+|+|||+|++|+ |+++++||++++|||+|.||||+|+|++..+++.++.      +..+++||+|++++..|.|||+
T Consensus        81 e~~~kiAflil~h~-d~~~l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~------~~~~f~NV~v~~~~~~v~WGg~  153 (391)
T 2gak_A           81 EVGFPIAYSIVVHH-KIEMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQG------IASCFDNVFVASQLESVVYASW  153 (391)
T ss_dssp             HHTSCEEEEEEECS-CHHHHHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHH------HHHTCTTEEECSSCCCCCTTSH
T ss_pred             ccCCCEEEEEEecC-CHHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHH------HHhcCCCEEEeccCcccccCCc
Confidence            34699999999997 9999999999999999999999999999887777653      2457999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhcCCCCcEEEEecCCcccccChhHHHHHHccCCCccceEeeecCCCCccccccc--ccccCCCCcc
Q 015219          140 TMIAATLHAVAILLKQAKDWDWFINLSASDYPLMSQDDILHIFSYLPKYLNFLEHTSSIGWKEYQRAR--PIIIDPGLYH  217 (411)
Q Consensus       140 S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPL~t~~~l~~~fs~~~~~~NFIe~~~~~~wk~~~R~~--~~i~dpgly~  217 (411)
                      |||+|+|+||+.||+.+.+|+|||||||+||||+|+++|.++|+.+ +|+|||++.++.+|++. |++  +.+.+++++ 
T Consensus       154 S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~-~~~nFIe~~~~~~~~~~-R~~~~~~~~~~~l~-  230 (391)
T 2gak_A          154 TRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCS-TGENNLETEKMPPNKEE-RWKKRYAVVDGKLT-  230 (391)
T ss_dssp             HHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHT-TTCCBCCBEECCGGGSH-HHHEEEEEETTEEE-
T ss_pred             hHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhc-CCCceeeccCCCccccc-ceEeeeecccccee-
Confidence            9999999999999998779999999999999999999999999864 68999999988888653 332  223344322 


Q ss_pred             CCCCcceeccccCCCCCcceeeecceeeeecHHHHHHhhhccCCchHHHHHhhcCCCCCCCchhhhhhhcC---------
Q 015219          218 PKKSGVFWAKEKRSMPASFKLFMGSAWVVLTRSFLEFCIWGWDNLPRTLLMYYTNFLSSPEGYFHSVICNH---------  288 (411)
Q Consensus       218 ~~~~~~~~~~~kR~~P~~~~l~~GS~W~~LsR~fvey~i~~~dn~p~~ll~yf~~~~~pdE~yFqTvl~Ns---------  288 (411)
                            ++..++|.+|.++++|+|||||+|||+||+||++  |++++.+++||+++++|||+||||++.|.         
T Consensus       231 ------~~~~~k~~~P~~~~~~~GSqW~~LtR~~v~~vl~--d~~~~~~~~~~k~t~~pDE~ffqTll~~~~~pg~~~~~  302 (391)
T 2gak_A          231 ------NTGIVKAPPPLKTPLFSGSAYFVVTREYVGYVLE--NENIQKLMEWAQDTYSPDEFLWATIQRIPEVPGSFPSS  302 (391)
T ss_dssp             ------EEEEECCCCSCSSCCEECCSCCEEEHHHHHHHHH--CHHHHHHHHHHTTSSSGGGTHHHHHTTSTTSTTCCCSS
T ss_pred             ------eecccccCCccccceecccceeEecHHHHHHHHh--CCcHHHHHHHHcCCcCCchhHHHHHhhccCCCCccccc
Confidence                  3345678889999999999999999999999998  66788899999999999999999998764         


Q ss_pred             cccccccccCceeEEecCCCCC------CCCc----------ccCHHHHHHHHcCCCcEEeccCC--ChHHHHHHHHHHh
Q 015219          289 KDYQNTTVNHDLHYIRWDSPPK------QHPM----------TLTLKHFDDMVRSGAPFARKFAK--DDPVLNKIDENLL  350 (411)
Q Consensus       289 ~~f~~t~vn~nLRyi~W~~~~~------~~P~----------~l~~~D~~~l~~S~alFARKF~~--d~~vLd~Id~~ll  350 (411)
                      ..|.++++|+++|||+|+++.+      .||.          +|+.+|++.|.+|+++|||||++  |++||+|||+.|.
T Consensus       303 ~~~~~~~~~~~lr~i~W~~~~g~~~~G~p~p~c~~~~~~~~C~~~~~Dl~~l~~s~~lFARKF~~~~d~~~l~~l~~~l~  382 (391)
T 2gak_A          303 NKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWMLRQHHLFANKFDMDVDPFAIQCLDEHLR  382 (391)
T ss_dssp             GGGCBCTTTSSSEEECBTTTCSCGGGTCSSCCCSSEEETTEEECCGGGHHHHTTSCCSEEECCCTTTCHHHHHHHHHHHH
T ss_pred             cccccccccCceEEEEecccCCccccCCCCCCCccceecceeeecHHHHHHHHhCCCceEEccCCccCHHHHHHHHHHHh
Confidence            2455667899999999984221      2443          89999999999999999999997  7899999999999


Q ss_pred             ccCCCC
Q 015219          351 KRSNNR  356 (411)
Q Consensus       351 ~r~~~~  356 (411)
                      +|+..+
T Consensus       383 ~r~~~~  388 (391)
T 2gak_A          383 RKALEN  388 (391)
T ss_dssp             HHHHC-
T ss_pred             hhhhcc
Confidence            887543

PyMOL of 2gak

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		411
d1qg8a_		255	Spore coat polysaccharide biosynthesis protein Sps	82.04

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=82.04  E-value=3.1  Score=35.28  Aligned_cols=116  Identities=5%  Similarity=0.083  Sum_probs=68.2

Q ss_pred             CcEEEEEEecCCCHHHHHHHHHHHc---CCCCEEEEEEeCCCChHHHHHHHHhhhhhccccccCceEEeCcceeee---e
Q 015219           63 PRLAYLISGTKGDGARVKRVLQAVY---HPMNYYVLHLDLEASDGERLELAKYVKSEKVIRDFKNVMVIGKADLVT---Y  136 (411)
Q Consensus        63 ~~iAYlIl~hk~d~~~l~RLl~aLy---hp~n~y~IHvD~ks~~~~~~~l~~~v~~~~~~~~~~NV~vv~~~~~V~---w  136 (411)
                      |++..+|.+++ ....|++.|+.+-   .++ .=+|=+|-.|++...+.++++.       .-.+|+++.......   -
T Consensus         1 P~vSiiip~yN-~~~~l~~~l~Si~~Qt~~~-~eiivvdd~S~d~t~~~l~~~~-------~~~~i~~~~~~~~~~~~~~   71 (255)
T d1qg8a_           1 PKVSVIMTSYN-KSDYVAKSISSILSQTFSD-FELFIMDDNSNEETLNVIRPFL-------NDNRVRFYQSDISGVKERT   71 (255)
T ss_dssp             CCEEEEEEESS-CTTTHHHHHHHHHTCSCCC-EEEEEEECSCCHHHHHHHGGGG-------GSTTEEEEECCCCSHHHHH
T ss_pred             CEEEEEEecCC-CHHHHHHHHHHHHhCCCCC-eEEEEEECCCCccHHHHHHHhh-------hhccccccccccccccccc
Confidence            68999999998 5788999888874   233 3455566667777766665432       235677765332110   0


Q ss_pred             CCccHHHHHHHHHHHHHhcCCCCcEEEEecCCcccccC-hhHHHHHHccCCCccceEe
Q 015219          137 KGPTMIAATLHAVAILLKQAKDWDWFINLSASDYPLMS-QDDILHIFSYLPKYLNFLE  193 (411)
Q Consensus       137 gg~S~V~AtL~~~~~lL~~~~~wdyfi~LSgsDyPL~t-~~~l~~~fs~~~~~~NFIe  193 (411)
                      ...+.-.|    +..+++.. +-||++.|.+.|++... .+.+..+|.. +.+..++-
T Consensus        72 ~~~g~~~a----~N~gi~~a-~g~~i~~lD~Dd~~~p~~l~~~~~~~~~-~~~~~~v~  123 (255)
T d1qg8a_          72 EKTRYAAL----INQAIEMA-EGEYITYATDDNIYMPDRLLKMVRELDT-HPEKAVIY  123 (255)
T ss_dssp             SSCHHHHH----HHHHHHHC-CCSEEEEEETTEEECTTHHHHHHHHHHH-CTTCCEEE
T ss_pred             ccchhccc----cccccccc-ccccccccccccccccchHHHHHHHHHh-CCCCCeEe
Confidence            12222222    22334433 45999999999998754 3445555643 33455553

PyMOL of d1qg8a_