Citrus Sinensis ID: 015226
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 411 | ||||||
| 255572012 | 582 | conserved hypothetical protein [Ricinus | 0.992 | 0.701 | 0.727 | 1e-175 | |
| 224055641 | 586 | predicted protein [Populus trichocarpa] | 0.995 | 0.697 | 0.718 | 1e-174 | |
| 297805610 | 586 | hypothetical protein ARALYDRAFT_493918 [ | 0.997 | 0.699 | 0.706 | 1e-172 | |
| 30693640 | 586 | uncharacterized protein [Arabidopsis tha | 0.997 | 0.699 | 0.689 | 1e-169 | |
| 9758091 | 595 | unnamed protein product [Arabidopsis tha | 0.997 | 0.689 | 0.675 | 1e-168 | |
| 27311557 | 588 | Unknown protein [Arabidopsis thaliana] | 0.992 | 0.693 | 0.662 | 1e-163 | |
| 30688768 | 588 | uncharacterized protein [Arabidopsis tha | 0.992 | 0.693 | 0.662 | 1e-163 | |
| 449455894 | 589 | PREDICTED: uncharacterized membrane prot | 1.0 | 0.697 | 0.678 | 1e-161 | |
| 356571451 | 580 | PREDICTED: uncharacterized membrane prot | 1.0 | 0.708 | 0.677 | 1e-161 | |
| 449492897 | 589 | PREDICTED: uncharacterized membrane prot | 1.0 | 0.697 | 0.676 | 1e-161 |
| >gi|255572012|ref|XP_002526947.1| conserved hypothetical protein [Ricinus communis] gi|223533699|gb|EEF35434.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 619 bits (1596), Expect = e-175, Method: Compositional matrix adjust.
Identities = 307/422 (72%), Positives = 354/422 (83%), Gaps = 14/422 (3%)
Query: 1 MEPPKGFLASLWSFICFLPYFIGLLLLGIIKGIIFCPVICLMMTIGNSAIILGLLPAHVL 60
MEPP+GFL +LW+FICFLP+F GLLLLG IKGIIFCP++CL++ +GNSAI LGL P HV
Sbjct: 1 MEPPRGFLVTLWNFICFLPFFAGLLLLGTIKGIIFCPLVCLIIAVGNSAITLGLWPLHVF 60
Query: 61 WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
WTYY I+RAKQLGPVLK++ CI +P LILW V I SIIGG LYGFLSP+FATFDAVG
Sbjct: 61 WTYYSIMRAKQLGPVLKIVLCILLPAPLILWLAVGIVGSIIGGILYGFLSPVFATFDAVG 120
Query: 121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRLL 180
EGK+N ++HCFYDGTW TI+ S TIVRDF D C+HSYFS MDDL+Q+Q PD KYYEIRLL
Sbjct: 121 EGKSNVLYHCFYDGTWDTIQKSCTIVRDFADFCYHSYFSYMDDLQQQQPPDRKYYEIRLL 180
Query: 181 YIPGAIIAGGLGVLIDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
Y+PGA+IAG LG ++D P+IS +A+CKSPYMLFKGWHRLFHDLIGREGPFLETICVP AG
Sbjct: 181 YLPGALIAGLLGFILDFPLISFIAICKSPYMLFKGWHRLFHDLIGREGPFLETICVPFAG 240
Query: 241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
LAI+LWPLAVVGAVLGSM++SIFLGAYAGV+VYQESS W+GL YI+A+ ++YDEYSND L
Sbjct: 241 LAILLWPLAVVGAVLGSMISSIFLGAYAGVIVYQESSFWYGLCYIVASWALYDEYSNDTL 300
Query: 301 DMPEGSCFPRPQYRKKADL----SRTSTFSRPSSFKDPPSRTSSLRKPIDLKPLE----- 351
DMPEGSCFPRP+YRK A+L SR S+FSRPSSFK R L +DLKP E
Sbjct: 301 DMPEGSCFPRPKYRKNAELSKSTSRASSFSRPSSFK---YRLDPLPPMVDLKPFELLNGL 357
Query: 352 --ECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILL 409
ECQ+HGE ++SEGLITA+DIEDAKSN G VV+IGLPAYCLLQ LLRSA ANS GILL
Sbjct: 358 FKECQKHGENFLSEGLITAQDIEDAKSNKGGTVVNIGLPAYCLLQTLLRSAKANSEGILL 417
Query: 410 SE 411
S+
Sbjct: 418 SD 419
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224055641|ref|XP_002298580.1| predicted protein [Populus trichocarpa] gi|222845838|gb|EEE83385.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297805610|ref|XP_002870689.1| hypothetical protein ARALYDRAFT_493918 [Arabidopsis lyrata subsp. lyrata] gi|297316525|gb|EFH46948.1| hypothetical protein ARALYDRAFT_493918 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|30693640|ref|NP_198880.2| uncharacterized protein [Arabidopsis thaliana] gi|28393245|gb|AAO42051.1| unknown protein [Arabidopsis thaliana] gi|28827666|gb|AAO50677.1| unknown protein [Arabidopsis thaliana] gi|332007193|gb|AED94576.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|9758091|dbj|BAB08535.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|27311557|gb|AAO00744.1| Unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|30688768|ref|NP_189375.2| uncharacterized protein [Arabidopsis thaliana] gi|332278120|sp|Q8GUM4.2|Y3739_ARATH RecName: Full=Uncharacterized membrane protein At3g27390 gi|332643790|gb|AEE77311.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449455894|ref|XP_004145685.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356571451|ref|XP_003553890.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449492897|ref|XP_004159134.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 411 | ||||||
| TAIR|locus:2168803 | 586 | AT5G40640 [Arabidopsis thalian | 0.997 | 0.699 | 0.630 | 9.9e-142 | |
| TAIR|locus:2086726 | 588 | AT3G27390 "AT3G27390" [Arabido | 0.997 | 0.697 | 0.613 | 1.1e-140 | |
| TAIR|locus:2135748 | 575 | AT4G12680 "AT4G12680" [Arabido | 0.827 | 0.591 | 0.497 | 5.9e-101 | |
| TAIR|locus:2114960 | 569 | AT4G37030 "AT4G37030" [Arabido | 0.673 | 0.486 | 0.401 | 2.9e-66 |
| TAIR|locus:2168803 AT5G40640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1386 (493.0 bits), Expect = 9.9e-142, P = 9.9e-142
Identities = 266/422 (63%), Positives = 312/422 (73%)
Query: 1 MEPPKGFLASLWSFICFLPYFXXXXXXXXXXXXXFCPVICLMMTIGNSAIILGLLPAHVL 60
MEPP G LASLW FI F+PYF CP+ICL + IGNSAIILGLLP H +
Sbjct: 1 MEPPTGILASLWQFILFIPYFTGLLLLGVIKGIVLCPLICLTVAIGNSAIILGLLPVHAI 60
Query: 61 WTYYCILRAKQLGPVLKLLTCICIPVFLILWPVVSIGASIIGGALYGFLSPIFATFDAVG 120
WT Y I AKQLGP+LK+ C+C+P+ +ILW VVSI S++GGA+YGFLSPIFATFDAVG
Sbjct: 61 WTLYSIASAKQLGPILKIFLCLCVPLGVILWLVVSILGSVLGGAIYGFLSPIFATFDAVG 120
Query: 121 EGKTNDIFHCFYDGTWSTIKHSFTIVRDFKDVCFHSYFSLMDDLRQKQAPDGKYYEIRXX 180
EGK+N FHCFYDGTWST++ SFT+V DFKDVCFHSYFS MDDLR A + YYEIR
Sbjct: 121 EGKSNPFFHCFYDGTWSTVQGSFTVVCDFKDVCFHSYFSFMDDLRTSTA-NRHYYEIRLL 179
Query: 181 XXXXXXXXXXXXXXXDVPVISVVALCKSPYMLFKGWHRLFHDLIGREGPFLETICVPLAG 240
D PVIS++ALCKSPYMLFKGWHRLFHDLIGREGPFLET+CVP+AG
Sbjct: 180 QIPGAVIVAVLGILVDFPVISLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPIAG 239
Query: 241 LAIILWPLAVVGAVLGSMVTSIFLGAYAGVVVYQESSLWFGLRYIIAALSIYDEYSNDIL 300
L I+LWPLAVVGAVLGS+V+S+FLGAY GVV YQESS +FGL Y++A++SIYDEYSND+L
Sbjct: 240 LVILLWPLAVVGAVLGSVVSSVFLGAYGGVVSYQESSFFFGLCYVVASVSIYDEYSNDVL 299
Query: 301 DMPEGSCFPRPQYRKK---ADLXXXXXXXXXXXXKDPPSRTSSLRKP-IDLKPLE----- 351
DMPEGSCFPRP YR+ A K PSR S + P IDLKPL+
Sbjct: 300 DMPEGSCFPRPIYRRNEEGASTAFSGGLSRPNSFKTTPSRGGSNKGPMIDLKPLDLLEAL 359
Query: 352 --ECQRHGEIWVSEGLITAKDIEDAKSNSGSQVVSIGLPAYCLLQALLRSAMANSPGILL 409
EC+RHGEI V++G+I +KDIE+AKS+ GSQV+S GLPAY LL LLRS +NS G+LL
Sbjct: 360 FVECRRHGEIMVTKGIINSKDIEEAKSSKGSQVISFGLPAYSLLHELLRSIKSNSTGLLL 419
Query: 410 SE 411
+
Sbjct: 420 GD 421
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| TAIR|locus:2086726 AT3G27390 "AT3G27390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2135748 AT4G12680 "AT4G12680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2114960 AT4G37030 "AT4G37030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pg.C_LG_I002235 | hypothetical protein (586 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00