Citrus Sinensis ID: 015229

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-
Protein Sequence
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVFFQGER
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEccccEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccccEEEEcccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccEEccHHHHHHHHHHHHHHHHHHccccccEEcEEEEcccccccccHHHHHHHHHHHHHccccccccccccccccccEEEEcccccccccccccccccccccccEEEEcccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEccccccEEEEEEccccccccccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEccccccEEEcccEEEEEEEEccccccccccccccccccccccccccccHcEccccEcccEEEcccccccccccccEEcccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccccccHHHHHHHHHHHHHHHccccccccEccccEEccccccccHcccccccccccccccEEEEEccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHcccc
Coil and Loop (DISEMBL)
mdtecwgdevSKKVLWQYKslpkkgkpqgrEVTVLAAFLISSPSKDLEVVALGTGtkcigrsllsphgdivndSHAEIVARRALLRFFYTEVLNKqkcsngieglrdDVFNNflfelgptgkyrfregWQLHLYISqlpcgdaslsschsaprnffsregnslssvdelngfkdgiceasnlnnddslqhigrvqrkpgrgdttlsvsCSDKIARWNAVGVQGALLSYFLQpvylssitvgrspntsedfpleehlKRSLYdrilplseelsspfqvnkpiflaasvppeefqhsetasstltcgysicwnksglheVILGttgrkqgtsakgalspstqsslcKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASkvfkggppfnnwplkplgyevffqger
Flexible Loop (DISEMBL)
mdtecwgdevskkVLWQYkslpkkgkpqgrEVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASNLNNDDSLQHIgrvqrkpgrgdttLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKgalspstqsslCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVFFQGER
Low Complexity Region (SEG)
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVFFQGER
Disordered region (IsUnstruct)
****CWGDEVSKKVLWQYKSL********REVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLS****************************GIC**************************TLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVG****************RSLYDRILPL*******FQVNKPIFLAA**************STLTCGYSICWNKSGLHEVILGTT*******************LCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVFF****
Disordered Region (DISOPRED)
****CWGDEVSKKVLWQYKSLPKKGKP*GREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPH*DIVNDSHAEIVARRALLRFFYTEVLNKQ********************LGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAP***********************************LQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAAS********************SICWNKSGLHEVILGTTGRKQGTS***********SLCKNRLLQVFLSLKHESK**CLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVFF****
Disordered Region (DISEMBL)
********EVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVP************TLTCGYSICWNKSGLHEVILGTTG*****************SLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVFFQGER
Disordered Region (DISPRO)
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCS***********NNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSC**************LSSVDELNGFKDGICEASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE**********TLTCGYSICWNKSGLHEVILGTT***************TQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVFF****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVFFQGER
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	411	2.2.26 [Sep-21-2011]
Q9V3R6	394	tRNA-specific adenosine d	yes	no	0.868	0.906	0.329	8e-38
Q28FE8	472	tRNA-specific adenosine d	no	no	0.946	0.824	0.286	6e-35
P51400	711	Double-stranded RNA-speci	yes	no	0.834	0.482	0.293	2e-33
Q91ZS8	711	Double-stranded RNA-speci	yes	no	0.834	0.482	0.291	3e-33
P78563	741	Double-stranded RNA-speci	no	no	0.836	0.464	0.295	8e-33
Q9NS39	739	Double-stranded RNA-speci	no	no	0.880	0.489	0.305	2e-32
P55265	1226	Double-stranded RNA-speci	no	no	0.817	0.274	0.302	1e-30
Q99MU3	1178	Double-stranded RNA-speci	no	no	0.817	0.285	0.297	2e-30
P55266	1175	Double-stranded RNA-speci	no	no	0.817	0.285	0.297	5e-30
Q9JI20	745	Double-stranded RNA-speci	no	no	0.880	0.485	0.290	7e-29

>sp|Q9V3R6|ADAT1_DROME tRNA-specific adenosine deaminase 1 OS=Drosophila melanogaster GN=adat PE=2 SV=1

 Score =  158 bits (399), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 134/407 (32%), Positives = 199/407 (48%), Gaps = 50/407 (12%)

Query: 9   EVSKKVLWQYKSLPKKGKPQGREVTVLAAFL-ISSPSKDLEVVALGTGTKCIGRSLLSPH 67
           E+++  L +++SLPK GKP   + T+LA  +  +  ++  ++V+LG GTKCIG S L P+
Sbjct: 11  EIAELCLKKFESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCGTKCIGESKLCPN 70

Query: 68  GDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF--NNFLFELGPTGKYRF 125
           G I+NDSHAE++ARR  LRF Y E+  KQ          D +F  N+ L        Y  
Sbjct: 71  GLILNDSHAEVLARRGFLRFLYQEL--KQ----------DRIFHWNSTL------STYDM 112

Query: 126 REGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASNLNND 185
            E  + H   +Q PCGDA +      P     R+     S     G K      S+L++D
Sbjct: 113 DEHVEFHFLSTQTPCGDACILE-EEQPAARAKRQRLDEDSEMVYTGAK----LISDLSDD 167

Query: 186 DSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL-QPVYLSSITVGRSP 244
             LQ  G ++ KPGRG+ TLS+SCSDKIARWN +GVQGALL   + +P+Y SS+      
Sbjct: 168 PMLQTPGALRTKPGRGERTLSMSCSDKIARWNVIGVQGALLDVLISKPIYFSSL------ 221

Query: 245 NTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKP-IFLAASVPPEEFQHSETASSTLT 303
           N   D    E L+R+++ R    + +  + FQ  +P I +   +  E  Q S+   S   
Sbjct: 222 NFCCDDAQLESLERAIFKRFDCRTFK-HTRFQPQRPQINIDPGIRFEFSQRSDWQPSP-- 278

Query: 304 CGYSICWNK--SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSL-KHESK 360
               + W++    L    +   G++QG + K   +     ++ K +L   FL L K   K
Sbjct: 279 --NGLIWSQVPEELRPYEISVNGKRQGVTKKKMKTSQAALAISKYKLFLTFLELVKFNPK 336

Query: 361 IRCL-------AADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKP 400
           +  +          I+Y   KD A+ Y  A +  K    F  W  KP
Sbjct: 337 LSEMFDQQLSDPERIAYASCKDLARDYQFAWREIKEK-YFLQWTKKP 382

Specifically deaminates adenosine-37 to inosine in tRNA-Ala.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: -

>sp|Q28FE8|ADAT1_XENTR tRNA-specific adenosine deaminase 1 OS=Xenopus tropicalis GN=adat1 PE=2 SV=1

 Score =  148 bits (374), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 213/474 (44%), Gaps = 85/474 (17%)

Query: 7   GDEVSKKVLWQYKS-LPKKGKPQ-GREVTVLAAFLISSPSKDLEV----VALGTGTKCIG 60
            DE++      Y + LPK+G P   RE T++AA +     +D +V    VA+GTGTKCIG
Sbjct: 9   ADEIAALSYGHYTTQLPKQGLPDPSREWTLMAAVIQIESVEDTKVIKKVVAMGTGTKCIG 68

Query: 61  RSLLSPHGDIVNDSHAEIVARRA----LLRFFYTEVLNKQKC------SNGIEGLRDDVF 110
           ++ L   GD++ DSHAEI+A+R+    LL      V + + C        G   LR ++ 
Sbjct: 69  QAKLRKTGDVLQDSHAEIIAKRSFQRYLLHQLSLAVSDTKDCLFIPGTEKGKWMLRPEIS 128

Query: 111 NNFLFELGPTGKYRF-----REGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLS- 164
             F     P G          E    H   S++   D S ++   +    + R+  S   
Sbjct: 129 FVFFTSHTPCGDASIIPVISHEDELGHPLPSEVTEKDHSSNNVCESVNTTYKRKVRSEED 188

Query: 165 ----------SVDE-----------------------LNGFKDGI-CEASNLNNDDS--- 187
                     S+DE                       L+  + G  C A  L +  S   
Sbjct: 189 IGFISKKMKHSIDEILTRPENYEEENRHDFPSTCQKALDVHRTGAKCVAGELQDSYSPGV 248

Query: 188 -LQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL-QPVYLSSITVGRSPN 245
               +G ++ KPGRGD T+S+SCSDK+ARWN +G QGALL +FL QP+YLS++ VG+ P 
Sbjct: 249 NYHTVGVLRIKPGRGDRTMSMSCSDKMARWNVLGCQGALLMHFLQQPIYLSAVVVGKCPF 308

Query: 246 TSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST---- 301
           +      ++ ++R+LY+R   +   L   F++N+   + + +   EFQH   A +     
Sbjct: 309 S------QDAMERALYNRCHKVL-SLPCAFRLNRVQIIQSDL---EFQHGRHALTKKDAT 358

Query: 302 ---LTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVF------ 352
              + CG ++ W+    H + +   G +QGT+ K   SP  +S +CK  +   F      
Sbjct: 359 RKLVPCGAAVSWSAVPHHPLDVTANGYRQGTTRKAIGSPQCRSRICKAEIFNTFRELVQR 418

Query: 353 LSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
           LS K  S+        +Y + K  A  Y  A    +    F +W   P  + +F
Sbjct: 419 LSEKQRSESLSSQGLKTYWDYKAAAITYQEAWNCLR-QQAFTSWIQTPRDFLMF 471

Specifically deaminates adenosine-37 to inosine in tRNA-Ala.

Xenopus tropicalis (taxid: 8364)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: -

>sp|P51400|RED1_RAT Double-stranded RNA-specific editase 1 OS=Rattus norvegicus GN=Adarb1 PE=1 SV=1

 Score =  144 bits (362), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 187/398 (46%), Gaps = 55/398 (13%)

Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VL+  ++++ +  KD +V+++ TGTKCI 
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
              +S  G  +ND HAEI++RR+LLRF Y ++   +   N  E  +  +F          
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSIFQK-----SER 431

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEAS 180
           G +R ++  Q HLYIS  PCGDA + S H       + + + L+   + +  +    +  
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMAPDSHQLTEPADRHPNRKARGQLR 491

Query: 181 N----------LNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL 230
                      + ++ S+Q    V     +G+  L++SCSDKIARWN VG+QGALLS F+
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVL----QGERLLTMSCSDKIARWNVVGIQGALLSIFV 547

Query: 231 QPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE 290
           +P+Y SSI +G            +HL R++Y RI  + E+L   + +NKP+    S    
Sbjct: 548 EPIYFSSIILG-------SLYHGDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS---- 595

Query: 291 EFQHSETASSTLTCGYSICWNKSGLH-EVILGTTGRKQGTSAKGALSPSTQSSLCKNRLL 349
              ++E         +S+ W       EVI  TTG+ +             S LCK+ L 
Sbjct: 596 ---NAEARQPGKAPNFSVNWTVGDTAIEVINATTGKDE---------LGRPSRLCKHALY 643

Query: 350 QVFLSLKHESKIRCLAADI----SYRELKDGAQAYNIA 383
             ++ +  +     L   I    +Y E K  A+ Y  A
Sbjct: 644 CRWMRVHGKVPPHLLRTKITKPTTYHESKLAAKEYQAA 681

Editing of the messenger RNAs for glutamate receptor (GluR) subunits by site-selective adenosine deamination. Edits both the GluR-B Q/R and R/G sites efficiently but converts the adenosine in hotspot1 much less efficiently.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q91ZS8|RED1_MOUSE Double-stranded RNA-specific editase 1 OS=Mus musculus GN=Adarb1 PE=1 SV=1

 Score =  143 bits (360), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 187/398 (46%), Gaps = 55/398 (13%)

Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VL+  ++++ +  KD +V+++ TGTKCI 
Sbjct: 321 QVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVISVSTGTKCIN 379

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT 120
              +S  G  +ND HAEI++RR+LLRF Y ++   +   N  E  +  +F          
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYAQL---ELYLNNKEDQKKSIFQK-----SER 431

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEAS 180
           G +R ++  Q HLYIS  PCGDA + S H       + + + L+   + +  +    +  
Sbjct: 432 GGFRLKDTVQFHLYISTSPCGDARIFSPHEPVLEGMTPDSHQLTEPADRHPNRKARGQLR 491

Query: 181 N----------LNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL 230
                      + ++ S+Q    V     +G+  L++SCSDKIARWN VG+QG+LLS F+
Sbjct: 492 TKIESGEGTIPVRSNASIQTWDGVL----QGERLLTMSCSDKIARWNVVGIQGSLLSIFV 547

Query: 231 QPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE 290
           +P+Y SSI +G            +HL R++Y RI  + E+L   + +NKP+    S    
Sbjct: 548 EPIYFSSIILG-------SLYHGDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS---- 595

Query: 291 EFQHSETASSTLTCGYSICWN-KSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLL 349
              ++E         +S+ W       EVI  TTG+ +             S LCK+ L 
Sbjct: 596 ---NAEARQPGKAPNFSVNWTVGDATIEVINATTGKDE---------LGRPSRLCKHALY 643

Query: 350 QVFLSLKHESKIRCLAADI----SYRELKDGAQAYNIA 383
             ++ +  +     L   I    +Y E K  A+ Y  A
Sbjct: 644 CRWMRVHGKVPPHLLRTKITKPTTYHESKLAAREYQAA 681

Editing of the messenger RNAs for glutamate receptor (GluR) subunits by site-selective adenosine deamination. Edits both the GluR-B Q/R and R/G sites efficiently but converts the adenosine in hotspot1 much less efficiently.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|P78563|RED1_HUMAN Double-stranded RNA-specific editase 1 OS=Homo sapiens GN=ADARB1 PE=1 SV=1

 Score =  141 bits (356), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 193/427 (45%), Gaps = 83/427 (19%)

Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VLA  ++++ +  KD +V+++ TGTKCI 
Sbjct: 321 QVLADAVSRLVLGKFGDLTDNFSSPHARR-KVLAGVVMTTGTDVKDAKVISVSTGTKCIN 379

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFEL 117
              +S  G  +ND HAEI++RR+LLRF YT++   LN           +DD   + +F+ 
Sbjct: 380 GEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNN----------KDDQKRS-IFQK 428

Query: 118 GPTGKYRFREGWQLHLYISQLPCGDASLSSCH----SAPRNFFS-------------REG 160
              G +R +E  Q HLYIS  PCGDA + S H       R++               R  
Sbjct: 429 SERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEGSRSYTQAGVQWCNHGSLQPRPP 488

Query: 161 NSLSSVDELNGFKDGICEASNLNNDDSLQHIGRVQRKPGRG------------------- 201
             LS          G  E ++ + +   +   R + + G G                   
Sbjct: 489 GLLSDPSTSTFQGAGTTEPADRHPNRKARGQLRTKIESGEGTIPVRSNASIQTWDGVLQG 548

Query: 202 DTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLY 261
           +  L++SCSDKIARWN VG+QG+LLS F++P+Y SSI +G            +HL R++Y
Sbjct: 549 ERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSIILG-------SLYHGDHLSRAMY 601

Query: 262 DRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWN-KSGLHEVIL 320
            RI  + E+L   + +NKP+    S       ++E         +S+ W       EVI 
Sbjct: 602 QRISNI-EDLPPLYTLNKPLLSGIS-------NAEARQPGKAPNFSVNWTVGDSAIEVIN 653

Query: 321 GTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADIS----YRELKDG 376
            TTG+ +   A         S LCK+ L   ++ +  +     L + I+    Y E K  
Sbjct: 654 ATTGKDELGRA---------SRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLA 704

Query: 377 AQAYNIA 383
           A+ Y  A
Sbjct: 705 AKEYQAA 711

Editing of the messenger RNAs for glutamate receptor (GluR) subunits by site-selective adenosine deamination. Edits both the GluR-B Q/R and R/G sites efficiently but converts the adenosine in hotspot1 much less efficiently.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|Q9NS39|RED2_HUMAN Double-stranded RNA-specific editase B2 OS=Homo sapiens GN=ADARB2 PE=1 SV=1

 Score =  140 bits (352), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 191/416 (45%), Gaps = 54/416 (12%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
           + D +S+ V  +++ +     P       LA  +++    ++  +VVAL +GTKCI    
Sbjct: 361 FADSISQLVTQKFREVTTDLTPMHARHKALAGIVMTKGLDARQAQVVALSSGTKCISGEH 420

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
           LS  G +VND HAE+VARRA L F YT++   L+K+         R+D   +    L   
Sbjct: 421 LSDQGLVVNDCHAEVVARRAFLHFLYTQLELHLSKR---------REDSERSIFVRLK-E 470

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEAS 180
           G YR RE    HLY+S  PCGDA L S +    +  S    S   V +  G      E+ 
Sbjct: 471 GGYRLRENILFHLYVSTSPCGDARLHSPYEITTDLHS----SKHLVRKFRGHLRTKIESG 526

Query: 181 NLNNDDSLQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSI 238
                  ++    VQ   G   G+  +++SC+DKIARWN +G+QGALLS+F++PVYL SI
Sbjct: 527 --EGTVPVRGPSAVQTWDGVLLGEQLITMSCTDKIARWNVLGLQGALLSHFVEPVYLQSI 584

Query: 239 TVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETA 298
            VG   +T        HL R +  R+  +  +L + ++ N+P+    S        +E  
Sbjct: 585 VVGSLHHTG-------HLARVMSHRMEGVG-QLPASYRHNRPLLSGVS-------DAEAR 629

Query: 299 SSTLTCGYSICW-NKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKH 357
               +  +S+ W   S   E+I  TTGR+         S    S LCK+ L   +  L  
Sbjct: 630 QPGKSPPFSMNWVVGSADLEIINATTGRR---------SCGGPSRLCKHVLSARWARLYG 680

Query: 358 ESKIRCLAADIS---YRELKDGAQAY-NIASKVFKG--GPPFNNWPLKPLGYEVFF 407
               R  +   +   Y E K GA  Y ++  ++FK         W  KP   + F 
Sbjct: 681 RLSTRTPSPGDTPSMYCEAKLGAHTYQSVKQQLFKAFQKAGLGTWVRKPPEQQQFL 736

Does not act on glutamate receptor or on serotonin receptor subtype 2C. Capable of binding to dsRNA but also to ssRNA.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

>sp|P55265|DSRAD_HUMAN Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4

 Score =  134 bits (338), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 176/393 (44%), Gaps = 57/393 (14%)

Query: 34   VLAAFLISSPSKDLEVV-ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
            +LAA ++   S+D+ VV +LGTG +C+    LS  G+ VND HAEI++RR  +RF Y+E+
Sbjct: 868  ILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 927

Query: 93   L--NKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCH 149
            +  N Q   + I            FE    G K + ++    HLYIS  PCGD +L    
Sbjct: 928  MKYNSQTAKDSI------------FEPAKGGEKLQIKKTVSFHLYISTAPCGDGALFDKS 975

Query: 150  SAPRNFFSREGNSLSSVDELNGFKDGICEASNLNNDDSL----QHIGRVQRKPGRGDTTL 205
             + R   S E       +     K G       N + ++      I         G+   
Sbjct: 976  CSDRAMESTESRHYPVFENP---KQGKLRTKVENGEGTIPVESSDIVPTWDGIRLGERLR 1032

Query: 206  SVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRIL 265
            ++SCSDKI RWN +G+QGALL++FLQP+YL S+T+G           + HL R++  R+ 
Sbjct: 1033 TMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLGY-------LFSQGHLTRAICCRVT 1085

Query: 266  ----PLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST----LTCGYSICWNKSGLHE 317
                   + L  PF VN P     S+   + Q  +T  ++    L  GY +        E
Sbjct: 1086 RDGSAFEDGLRHPFIVNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDL--------E 1137

Query: 318  VILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGA 377
            ++ GT G   G         +  S + K  +  +F  L      R L   +SY E K  A
Sbjct: 1138 ILDGTRGTVDGPR-------NELSRVSKKNIFLLFKKLCSFRYRRDLLR-LSYGEAKKAA 1189

Query: 378  QAYNIASKVFKGGPP---FNNWPLKPLGYEVFF 407
            + Y  A   FK G     + NW  KP   + F+
Sbjct: 1190 RDYETAKNYFKKGLKDMGYGNWISKPQEEKNFY 1222

Converts multiple adenosines to inosines and creates I/U mismatched base pairs in double-helical RNA substrates without apparent sequence specificity. Has been found to modify more frequently adenosines in AU-rich regions, probably due to the relative ease of melting A/U base pairs as compared to G/C pairs. Functions to modify viral RNA genomes and may be responsible for hypermutation of certain negative-stranded viruses. Edits the messenger RNAs for glutamate receptor (GLUR) subunits by site-selective adenosine deamination. Produces low-level editing at the GLUR-B Q/R site, but edits efficiently at the R/G site and HOTSPOT1. Binds to short interfering RNAs (siRNA) without editing them and suppresses siRNA-mediated RNA interference. Binds to ILF3/NF90 and up-regulates ILF3-mediated gene expression.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: -

>sp|Q99MU3|DSRAD_MOUSE Double-stranded RNA-specific adenosine deaminase OS=Mus musculus GN=Adar PE=1 SV=2

 Score =  134 bits (336), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 174/393 (44%), Gaps = 57/393 (14%)

Query: 34   VLAAFLISSPSKDLEVV-ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
            +LAA ++    +D+ VV +LGTG +C+    LS  G+ VND HAEI++RR  +RF Y+E+
Sbjct: 817  ILAAIIMKRDPEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 876

Query: 93   LNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCHSA 151
            +                  N +FEL   G K + ++    HLYIS  PCGD +L     +
Sbjct: 877  MK----------YNHHTAKNSIFELARGGEKLQIKKTVSFHLYISTAPCGDGALFDKSCS 926

Query: 152  PRNFFSREGNSLSSVDELNGFKDGICEASNLNNDDSL----QHIGRVQRKPGRGDTTLSV 207
             R   S E       +     K G       N + ++      I         G+   ++
Sbjct: 927  DRAVESTESRHYPVFENP---KQGKLRTKVENGEGTIPVESSDIVPTWDGIRLGERLRTM 983

Query: 208  SCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRIL-- 265
            SCSDKI RWN +G+QGALL++FLQPVYL S+T+G           + HL R++  R+   
Sbjct: 984  SCSDKILRWNVLGLQGALLTHFLQPVYLKSVTLGY-------LFSQGHLTRAICCRVTRD 1036

Query: 266  --PLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST----LTCGYSICWNKSGLHEVI 319
                 + L  PF VN P     SV   + Q  +T  ++    +  GY +        E++
Sbjct: 1037 GKAFEDGLRYPFIVNHPKVGRVSVYDSKRQSGKTKETSVNWCMADGYDL--------EIL 1088

Query: 320  LGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLA--ADISYRELKDGA 377
             GT G   G        P  + S    +   +FL  K     R       +SY E K  A
Sbjct: 1089 DGTRGTVDG--------PGKELSRVSKK--NIFLQFKKLCSFRARRDLLQLSYGEAKKAA 1138

Query: 378  QAYNIASKVFKGG---PPFNNWPLKPLGYEVFF 407
            + Y++A   FK       + NW  KP   + F+
Sbjct: 1139 RDYDLAKNYFKKSLRDMGYGNWISKPQEEKNFY 1171

Converts multiple adenosines to inosines and creates I/U mismatched base pairs in double-helical RNA substrates without apparent sequence specificity. Has been found to modify more frequently adenosines in AU-rich regions, probably due to the relative ease of melting A/U base pairs as compared to G/C pairs. Functions to modify viral RNA genomes and may be responsible for hypermutation of certain negative-stranded viruses (By similarity). Binds to short interfering RNAs (siRNA) without editing them and suppresses siRNA-mediated RNA interference. Binds to ILF3/NF90 and up-regulates ILF3-mediated gene expression.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: -

>sp|P55266|DSRAD_RAT Double-stranded RNA-specific adenosine deaminase OS=Rattus norvegicus GN=Adar PE=2 SV=1

 Score =  132 bits (332), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 173/393 (44%), Gaps = 57/393 (14%)

Query: 34   VLAAFLISSPSKDLEVV-ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEV 92
            +LAA ++    +D+ VV +LGTG +C+    LS  G+ VND HAEI++RR  +RF Y+E+
Sbjct: 814  ILAAIIMKRDPEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSEL 873

Query: 93   LNKQKCSNGIEGLRDDVFNNFLFELGPTG-KYRFREGWQLHLYISQLPCGDASLSSCHSA 151
            +                  N +FEL   G K + ++    HLYIS  PCGD +      +
Sbjct: 874  MK----------YNHHTAKNSIFELARGGEKLQIKKTVSFHLYISTAPCGDGAHFDKSCS 923

Query: 152  PRNFFSREGNSLSSVDELNGFKDGICEASNLNNDDSL----QHIGRVQRKPGRGDTTLSV 207
             R   S E       +     K G       N + ++      I         G+   ++
Sbjct: 924  DRAVESTESRHYPVFENP---KQGKLRTKVENGEGTIPVESSDIVPTWDGIRLGERLRTM 980

Query: 208  SCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRIL-- 265
            SCSDKI RWN +G+QGALL++FLQPVYL S+T+G           + HL R++  R+   
Sbjct: 981  SCSDKILRWNVLGLQGALLTHFLQPVYLKSVTLGY-------LFSQGHLTRAICCRVTRD 1033

Query: 266  --PLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST----LTCGYSICWNKSGLHEVI 319
                 + L  PF VN P     SV   + Q  +T  ++    L  GY +        E++
Sbjct: 1034 GNAFEDGLRYPFIVNHPKVGRVSVYDSKRQSGKTKETSVNWCLADGYDL--------EIL 1085

Query: 320  LGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLA--ADISYRELKDGA 377
             GT G   G        P  + S    +   +FL  K     R       +SY E K  A
Sbjct: 1086 DGTRGTVDG--------PGKELSRVSKK--NIFLQFKKLCSFRARRDLLQLSYGEAKKAA 1135

Query: 378  QAYNIASKVFKGG---PPFNNWPLKPLGYEVFF 407
            + Y++A   FK       + NW  KP   + F+
Sbjct: 1136 RDYDLAKNYFKKSLRDMGYGNWISKPQEEKNFY 1168

Converts multiple adenosines to inosines and creates I/U mismatched base pairs in double-helical RNA substrates without apparent sequence specificity. DRADA has been found to modify more frequently adenosines in AU-rich regions, probably due to the relative ease of melting A/U base pairs as compared to G/C pairs. Functions to modify viral RNA genomes and may be responsible for hypermutation of certain negative-stranded viruses. Edits the messenger RNAs for glutamate receptor (GLUR) subunits by site-selective adenosine deamination. Produces low-level editing at the GLUR-B Q/R site, but edits efficiently at the R/G site and HOTSPOT1. Binds to short interfering RNAs (siRNA) without editing them and suppresses siRNA-mediated RNA interference. Binds to ILF3/NF90 and up-regulates ILF3-mediated gene expression.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 5

EC: .

EC: 4

EC: .

EC: -

>sp|Q9JI20|RED2_MOUSE Double-stranded RNA-specific editase B2 OS=Mus musculus GN=Adarb2 PE=2 SV=2

 Score =  128 bits (322), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 186/416 (44%), Gaps = 54/416 (12%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS--PSKDLEVVALGTGTKCIGRSL 63
           + D VS+ V  +++ L             LA  +++    +K  +V+ L +GTKCI    
Sbjct: 367 FADSVSQLVTQKFRELTVGLTSVYARHKTLAGIVMTKGLDTKQAQVIVLSSGTKCISGEH 426

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFELGPT 120
           +S  G +VND HAEIVARRA L F Y+++   L+K +         +D   +    L   
Sbjct: 427 ISDQGLVVNDCHAEIVARRAFLHFLYSQLELHLSKHQ---------EDPERSIFIRL-KE 476

Query: 121 GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEAS 180
           G YR RE    HLY+S  PCGDA ++S    P    +   +S   V +  G      E+ 
Sbjct: 477 GGYRLRENILFHLYVSTSPCGDARVNS----PYEITTDLNSSKHIVRKFRGHLRTKIESG 532

Query: 181 NLNNDDSLQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSI 238
                  ++    VQ   G   G+  +++SC+DKIA WN +G+QGALL +F++PVYL SI
Sbjct: 533 E--GTVPVRGPSAVQTWDGILLGEQLITMSCTDKIASWNVLGLQGALLCHFIEPVYLHSI 590

Query: 239 TVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETA 298
            VG   +T        HL R +  R+  +  +L + ++ N+P+    S       H+E  
Sbjct: 591 IVGSLHHTG-------HLARVMSHRMEGIG-QLPASYRQNRPLLSGVS-------HAEAR 635

Query: 299 SSTLTCGYSICW-NKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKH 357
               +  +S  W   S   E+I  TTG++         S    S LCK+     +  L  
Sbjct: 636 QPGKSPHFSANWVVGSADLEIINATTGKR---------SCGGSSRLCKHVFSAWWARLHG 686

Query: 358 ESKIRCLAADIS---YRELKDGAQAY-NIASKVFKG--GPPFNNWPLKPLGYEVFF 407
               R  +   +   Y E K GA  Y ++  ++FK         W  KP   + F 
Sbjct: 687 RLSTRIPSHGDTPSMYCEAKQGAHTYQSVKQQLFKAFQKAGLGTWVRKPPEQDQFL 742

Does not act on glutamate receptor or on serotonin receptor subtype 2C. Capable of binding to dsRNA but also to ssRNA.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	411
225454148	453	PREDICTED: tRNA-specific adenosine deami	0.987	0.896	0.648	1e-149
224127616	380	predicted protein [Populus trichocarpa]	0.883	0.955	0.655	1e-138
255541540	443	protein with unknown function [Ricinus c	0.968	0.898	0.618	1e-137
357497385	413	Double-stranded RNA-specific adenosine d	0.929	0.924	0.597	1e-131
356506269	407	PREDICTED: tRNA-specific adenosine deami	0.929	0.938	0.617	1e-130
449441482	406	PREDICTED: tRNA-specific adenosine deami	0.934	0.945	0.602	1e-129
186478036	420	Adenosine-deaminase (editase) domain-con	0.970	0.95	0.584	1e-126
356522634	384	PREDICTED: tRNA-specific adenosine deami	0.902	0.966	0.610	1e-124
297842944	399	predicted protein [Arabidopsis lyrata su	0.888	0.914	0.575	1e-114
8671846	435	Contains similarity to RNA adenosine dea	0.936	0.885	0.531	1e-112

>gi|225454148|ref|XP_002273023.1| PREDICTED: tRNA-specific adenosine deaminase 1 [Vitis vinifera] gi|297745247|emb|CBI40327.3| unnamed protein product [Vitis vinifera]

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 282/435 (64%), Positives = 323/435 (74%), Gaps = 29/435 (6%)

Query: 1   MDTE-CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCI 59
           +D+E  WG++VS+KVL  YKSLPKKGKPQGREVTVLAAFL SSPS+DLEVVALGTGTKCI
Sbjct: 15  LDSEKTWGEQVSEKVLSVYKSLPKKGKPQGREVTVLAAFLTSSPSQDLEVVALGTGTKCI 74

Query: 60  GRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSN------GIEGLRDDVFNNF 113
           GRS LSPHGDIVNDSHAE++ARRAL+RFFYTE+ +    SN      G E L  D   N 
Sbjct: 75  GRSRLSPHGDIVNDSHAEVIARRALMRFFYTEIQSLLTISNRHTHNYGSEQLEGDDITNM 134

Query: 114 LFELGPTG----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDE- 168
           LF L   G    K   R GW+LHLYISQLPCGDASLS    + R+F    G+  SSV E 
Sbjct: 135 LFHLDSDGPGQRKITMRAGWKLHLYISQLPCGDASLSLPLFSLRSFALINGDLPSSVSEN 194

Query: 169 ------------LNGFKDGICEASNLNNDDSL-----QHIGRVQRKPGRGDTTLSVSCSD 211
                       L+ F     +AS  NN  S      Q IG +QRKPGRGDTTLSVSCSD
Sbjct: 195 DSMDEQTDSLSNLDDFTGDFLDASMKNNVGSFSGNGSQIIGMIQRKPGRGDTTLSVSCSD 254

Query: 212 KIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEEL 271
           KIARWN +GVQGALLSYFLQPVYLSSITVG S  + + FPLE++L+R+LY+R LPLS++L
Sbjct: 255 KIARWNVLGVQGALLSYFLQPVYLSSITVGESHTSPKIFPLEDNLRRALYNRALPLSDKL 314

Query: 272 SSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSA 331
            SPFQVN+P+F  A +PP+EFQHSETA++TLTCGYSICWNKSGLHEVILGTTGRKQGTSA
Sbjct: 315 KSPFQVNQPLFWKAPIPPKEFQHSETATTTLTCGYSICWNKSGLHEVILGTTGRKQGTSA 374

Query: 332 KGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGP 391
           KGAL  ST+ SLCK RLL+VFL L H++ I   A ++SYRELKDGAQ Y  ASK+FKG P
Sbjct: 375 KGALYASTEPSLCKKRLLEVFLLLMHKTSIESPANEVSYRELKDGAQEYCSASKIFKGSP 434

Query: 392 PFNNWPLKPLGYEVF 406
           PFN W LK L  E F
Sbjct: 435 PFNGWLLKALNLEAF 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127616|ref|XP_002320118.1| predicted protein [Populus trichocarpa] gi|222860891|gb|EEE98433.1| predicted protein [Populus trichocarpa]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 261/398 (65%), Positives = 307/398 (77%), Gaps = 35/398 (8%)

Query: 18  YKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAE 77
           YKSLPKKGKPQG EVTVLA+FL+SSPS++LEVVALGTGTKC+GRSLLS  GDI+NDSHAE
Sbjct: 4   YKSLPKKGKPQGCEVTVLASFLLSSPSQELEVVALGTGTKCVGRSLLSNRGDILNDSHAE 63

Query: 78  IVARRALLRFF--YTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG----KYRFREGWQL 131
           I+ARRAL+RF   + E++ + K ++G         +N++FEL   G    K++ REGWQL
Sbjct: 64  IIARRALIRFITIFGELM-QVKINDG---------SNWIFELEQRGCSEEKFKLREGWQL 113

Query: 132 HLYISQLPCGDASLSSCHSAPRNFFSREGN---SLSSVDELNGFKDGICEASNLNNDDSL 188
           HLYISQLPCGDAS+SS  S  RN F+REG+   SLS     NG                 
Sbjct: 114 HLYISQLPCGDASVSSLLSPARNVFTREGDLPPSLSGRLSTNGS---------------- 157

Query: 189 QHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSE 248
           Q  G VQRKPGRGDTTLSVSCSDKIARWN VGVQGALLSYFLQPVYLSS+TVG+S N+ +
Sbjct: 158 QISGMVQRKPGRGDTTLSVSCSDKIARWNVVGVQGALLSYFLQPVYLSSVTVGQSSNSPK 217

Query: 249 DFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSI 308
           +F LE+HLKR+L+DRILPLS EL SPF ++KP+F AA  PP EF+H++TA  TLTCGYSI
Sbjct: 218 NFCLEDHLKRALHDRILPLSNELVSPFHLDKPLFYAAPEPPMEFKHADTALVTLTCGYSI 277

Query: 309 CWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADI 368
           CW+KSG+HEV+LGTTGRKQGTSAKGALSP+T SSLCK RLL+VFL+LK E + +C A DI
Sbjct: 278 CWSKSGMHEVVLGTTGRKQGTSAKGALSPATMSSLCKKRLLEVFLTLKQEFQSKCPAKDI 337

Query: 369 SYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
           SYRELK+ AQAY+  SK FK    FNNWPLKPL  E F
Sbjct: 338 SYRELKNNAQAYSSTSKSFKESAAFNNWPLKPLDSEAF 375

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541540|ref|XP_002511834.1| protein with unknown function [Ricinus communis] gi|223549014|gb|EEF50503.1| protein with unknown function [Ricinus communis]

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 256/414 (61%), Positives = 313/414 (75%), Gaps = 16/414 (3%)

Query: 1   MDTECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIG 60
           M++  WG++VS+KV+  Y SL KKGKPQGREVTVL++FLISSPS++LEV++LGTGTKC+G
Sbjct: 1   MESGSWGEKVSEKVISLYNSLQKKGKPQGREVTVLSSFLISSPSQELEVISLGTGTKCLG 60

Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV--LNKQKCSNGIEGLRDDVFNNFLFEL- 117
           RS LSP GDIVNDSHAEI+ARRAL+RFFY+E+  L      +G E  + D   N LF+L 
Sbjct: 61  RSQLSPRGDIVNDSHAEIIARRALMRFFYSEIRRLTDTFNKHGREQFQSDDVGNCLFDLE 120

Query: 118 ---GPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSR--EGNSLSSVDELNGF 172
                  K++ R GWQLHLYISQLPCGDAS+SS     RN F    +G   SS++     
Sbjct: 121 QDCSSQLKFKLRAGWQLHLYISQLPCGDASVSSPLLYMRNTFGTLPQGKLNSSME----- 175

Query: 173 KDGICEASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQP 232
              + E S  NN +  +  G VQRKPGRGD TLSVSCSDKIARWN +GVQGALLSY LQP
Sbjct: 176 ---VLEDSEGNNAEGSEIGGSVQRKPGRGDATLSVSCSDKIARWNVLGVQGALLSYLLQP 232

Query: 233 VYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEF 292
           +YLSSITVG+SPN+SE F LE  L+ SL DRILPLS +L +PFQVNKP+F +A VPP EF
Sbjct: 233 IYLSSITVGQSPNSSEHFQLENCLQLSLCDRILPLSNKLIAPFQVNKPLFCSAPVPPREF 292

Query: 293 QHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVF 352
           QH++TA + LTCGYSICWNKSGLHEV+LGTTGR+QGTSAKGALSPST+S LCK ++L++F
Sbjct: 293 QHADTALANLTCGYSICWNKSGLHEVVLGTTGRRQGTSAKGALSPSTRSFLCKKQVLEMF 352

Query: 353 LSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
           L L+ + +      +ISYRELK+ A+AY+  SK FK  PPF+NWPLKP+  E F
Sbjct: 353 LILREDMQHEDRDKEISYRELKNSAEAYSQTSKTFKRSPPFDNWPLKPMDLEAF 406

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357497385|ref|XP_003618981.1| Double-stranded RNA-specific adenosine deaminase [Medicago truncatula] gi|355493996|gb|AES75199.1| Double-stranded RNA-specific adenosine deaminase [Medicago truncatula]

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/420 (59%), Positives = 302/420 (71%), Gaps = 38/420 (9%)

Query: 5   CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLL 64
           C    VS+KV+  Y SLPKKGKPQGREVTVLAAFL+SSPS +L+VVALGTGTKCIGRS+L
Sbjct: 10  CLDQSVSEKVISLYNSLPKKGKPQGREVTVLAAFLLSSPSNELKVVALGTGTKCIGRSML 69

Query: 65  SPHGDIVNDSHAEIVARRALLRFFYTEVL------NKQKCSNGIEGLRDDVFNNFLFELG 118
            P+GD+V+DSHAE++ARRAL+RFFYT++       +K   SNG +  + D  NN  FE+ 
Sbjct: 70  RPYGDVVHDSHAEVIARRALIRFFYTQIQRLSEPSSKSAPSNGAKRFKVDD-NNLAFEVD 128

Query: 119 P----TGKYRFREGWQLHLYISQLPC-------GDASLSSCHSAPRNF-FSREGNSLSSV 166
                  KY  R GW+LH+YISQLPC       GDASLSS  +   +      G   SSV
Sbjct: 129 EGCLDKRKYTLRSGWKLHMYISQLPCNLIPHFRGDASLSSLVTPLESVPLGENGPHSSSV 188

Query: 167 DELNGFKDGICEASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALL 226
           +                   S + IG VQRKPGRGDTTLSVSCSDKIARWN VG+QGALL
Sbjct: 189 N-------------------SSKQIGMVQRKPGRGDTTLSVSCSDKIARWNVVGIQGALL 229

Query: 227 SYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAAS 286
           SYFLQPVYLSSITVG    + E+F  E++LKR+LYDRI+ L   L+SPF VN+P+F AA 
Sbjct: 230 SYFLQPVYLSSITVGLPHTSPENFQFEDNLKRALYDRIVHLENALTSPFLVNQPLFQAAP 289

Query: 287 VPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKN 346
           VPP +F  SE++++ LTCGYSICWN+ GLHEV LGTTGRKQGTSAKGAL PST+SSLCK 
Sbjct: 290 VPPNDFLQSESSANNLTCGYSICWNECGLHEVTLGTTGRKQGTSAKGALYPSTESSLCKK 349

Query: 347 RLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
           RLL+VFL L+ E   + L  DI+YRELKDGA+ Y++ASK+FKG PPF+NW +KPL  E F
Sbjct: 350 RLLEVFLPLREEFLAKSLDDDITYRELKDGAEEYHLASKIFKGKPPFSNWFVKPLDCEAF 409

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506269|ref|XP_003521909.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Glycine max]

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/410 (61%), Positives = 302/410 (73%), Gaps = 28/410 (6%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLS 65
           WG  VS+KVL  Y SLPKKGKPQGREVTVLA+FL+SSPS DL+VVA+GTGTKC+GRSLL 
Sbjct: 13  WGKRVSEKVLSFYTSLPKKGKPQGREVTVLASFLLSSPSNDLKVVAMGTGTKCLGRSLLR 72

Query: 66  PHGDIVNDSHAEIVARRALLRFFYTEVLN----KQKCSNGIEGLRDDVFNNFLFELGP-- 119
             GD+V+DSHAE++ARRAL+RFFYT++ +    K   SNG +  + D  N+  FEL P  
Sbjct: 73  TCGDVVHDSHAEVIARRALIRFFYTQIQHLTGSKHAPSNGGKRFKLDDGNS-PFELDPGC 131

Query: 120 --TGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGIC 177
              GKY  ++ W+LH+YISQLPCGDASLS   S        E +S S +           
Sbjct: 132 LNKGKYSLKKDWKLHMYISQLPCGDASLSWQVSPLETAVLGESDSTSPLG---------- 181

Query: 178 EASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQG-ALLSYFLQPVYLS 236
                   + L+  G VQRKP RGDTTLSVSCSDKIARW+  GVQG ALLSYFLQPVYLS
Sbjct: 182 --------NGLKQKGMVQRKPSRGDTTLSVSCSDKIARWSVAGVQGVALLSYFLQPVYLS 233

Query: 237 SITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSE 296
           SITVG   +  E+F LE+ LKR+LY+R+LPLS EL+SPF VN+PIF AA VPP++FQ SE
Sbjct: 234 SITVGLPLDILENFRLEDSLKRALYERMLPLSNELTSPFLVNQPIFHAAPVPPKDFQQSE 293

Query: 297 TASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLK 356
           +A++TLTCGYSICWN+ GLH+VI+GTTGRKQGTSAKGAL PSTQSSLCK RLL+VFLSL 
Sbjct: 294 SAANTLTCGYSICWNECGLHDVIMGTTGRKQGTSAKGALYPSTQSSLCKKRLLEVFLSLG 353

Query: 357 HESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
            E+ I  L   I+YRELKDGA+ Y++ASK+FK    FN W LKPL  E F
Sbjct: 354 PENLIGSLPNGITYRELKDGAEEYHLASKIFKRKASFNKWFLKPLDCEAF 403

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441482|ref|XP_004138511.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Cucumis sativus] gi|449518611|ref|XP_004166330.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Cucumis sativus]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/413 (60%), Positives = 302/413 (73%), Gaps = 29/413 (7%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPS-KDLEVVALGTGTKCIGRS 62
           E WG+ +S+KVL  Y +LPKKGKPQGREVTVLAAFL+SSPS +DLEVVALGTGTKC+GRS
Sbjct: 9   ERWGETISEKVLSVYNTLPKKGKPQGREVTVLAAFLLSSPSPQDLEVVALGTGTKCLGRS 68

Query: 63  LLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIE-----GLRDDVFNNFLFEL 117
            LS +GD+VNDSHAE+VARRAL+RFFYT++ ++ + ++  E      +R D  NNFL ++
Sbjct: 69  QLSSNGDVVNDSHAEVVARRALMRFFYTQIYHQSQSNSESEHHKTKKMRCDNVNNFLLQI 128

Query: 118 ----GPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFK 173
               G   KY  R+ W+LHLYISQLPCGDAS     SA R+  +R  N    +     F 
Sbjct: 129 DEEAGAERKYVMRKCWKLHLYISQLPCGDAS----SSATRDVQARSDNVAPCL-----FD 179

Query: 174 DGICEASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPV 233
            G         DDS Q IG VQRKPGRGDTTLSVSCSDKIARWN  G+QGALLSYFLQPV
Sbjct: 180 KG---------DDS-QCIGSVQRKPGRGDTTLSVSCSDKIARWNVAGLQGALLSYFLQPV 229

Query: 234 YLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQ 293
           +LSSITVG SP+ +++  +E  LK ++ DR+   S EL +P +VN+P+F  A +PP+EFQ
Sbjct: 230 FLSSITVGLSPHNAKNCIVEGLLKSAVCDRVQLFSNELMNPLKVNQPLFCTAPIPPKEFQ 289

Query: 294 HSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFL 353
           HSE+A +T+TCGYSI WNKSGLHEVILGTTGRKQG SAKGA  PST+SSLCK RLL++F 
Sbjct: 290 HSESALNTITCGYSIYWNKSGLHEVILGTTGRKQGASAKGAQYPSTESSLCKKRLLEMFW 349

Query: 354 SLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
           SLK E   +  + DISYR LKDG+Q Y + SKVFK  P F NW  KP+ YE F
Sbjct: 350 SLKSECTTKFPSTDISYRTLKDGSQDYYLTSKVFKEQPAFRNWISKPINYEAF 402

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186478036|ref|NP_171681.3| Adenosine-deaminase (editase) domain-containing protein [Arabidopsis thaliana] gi|332189211|gb|AEE27332.1| Adenosine-deaminase (editase) domain-containing protein [Arabidopsis thaliana]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/421 (58%), Positives = 295/421 (70%), Gaps = 22/421 (5%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG  VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+D +V+ALGTGTKC+  SL
Sbjct: 3   EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPSQDPKVIALGTGTKCVSGSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCS---NGIEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q  S   N  +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKSNEAKRQRIDSETSSILESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDG 175
                 KY+ + G  LHLYISQLPCG AS SS   A +   S + +     D L      
Sbjct: 123 SCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVD-----DSLLVQASD 177

Query: 176 ICEA---------SNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALL 226
           IC +         SN N  +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQGALL
Sbjct: 178 ICSSRHSDVPEIGSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALL 237

Query: 227 SYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAAS 286
              LQPVY+S+ITVG+S ++ ++F L +HL+RSLY+RILPLS+EL + F++NKP+F  A 
Sbjct: 238 YQVLQPVYISTITVGQSLHSPDNFSLADHLRRSLYERILPLSDELLTSFRLNKPLFFVAP 297

Query: 287 VPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKN 346
           VPP EFQHSETA +TLTCGYS+CWN SGLHEVILGTTGRKQGTSAKGAL PSTQSS+CK 
Sbjct: 298 VPPSEFQHSETAQATLTCGYSLCWNYSGLHEVILGTTGRKQGTSAKGALYPSTQSSICKQ 357

Query: 347 RLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
           RLL++FL   H  K     +  SYRELK+ A  Y + SK+FKG  PFNNW  KPL  E F
Sbjct: 358 RLLELFLKETHGHKRESSKSKKSYRELKNKATEYYLMSKIFKGKYPFNNWLRKPLNCEDF 417

Query: 407 F 407
            
Sbjct: 418 L 418

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522634|ref|XP_003529951.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Glycine max]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/406 (61%), Positives = 291/406 (71%), Gaps = 35/406 (8%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSLLS 65
           WG  VS+KVL  Y SLPKKGKPQGREVTVLAAFL+SSPS DL+VVA+GTGTKCIGRSLL 
Sbjct: 13  WGKRVSEKVLSFYASLPKKGKPQGREVTVLAAFLLSSPSNDLKVVAMGTGTKCIGRSLLR 72

Query: 66  PHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGP-TGKYR 124
             GD+V+DSHAE++ARRAL+RFFYT++ +  + S+               +  P  G  R
Sbjct: 73  TCGDVVHDSHAEVIARRALMRFFYTQIQHLTESSS---------------KHAPGNGGKR 117

Query: 125 FREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASNLNN 184
           F+   + HL     P GDASLS   S        E +S S +D  NG K           
Sbjct: 118 FKLD-EDHLPFEWDPGGDASLSFHVSPLETVVLGESDSTSPLD--NGSKQK--------- 165

Query: 185 DDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSP 244
                  G VQRKPGRGDTTLSVSCSDKIARWN VGVQGALLSYFLQPVYLSSITVG   
Sbjct: 166 -------GMVQRKPGRGDTTLSVSCSDKIARWNVVGVQGALLSYFLQPVYLSSITVGLPL 218

Query: 245 NTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTC 304
           N  E+F LE++LKR+LY+RI PL  EL+SPF VN+PIF AA VPP++FQ SE+A++TLTC
Sbjct: 219 NIPENFRLEDNLKRALYERIPPLLNELTSPFLVNQPIFHAAPVPPKDFQQSESAANTLTC 278

Query: 305 GYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCL 364
           GYSI WN+ GLH++I+GTTGRKQGTSAKGAL PSTQSSLCK RLL+VFLSL+ E+ I  L
Sbjct: 279 GYSIGWNECGLHDIIMGTTGRKQGTSAKGALYPSTQSSLCKKRLLEVFLSLRPENLISSL 338

Query: 365 AADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVFFQGE 410
              I+YRELKDGA+ Y++ASK+FKG PPFN W LKPL  E F   E
Sbjct: 339 PNGITYRELKDGAEEYHLASKIFKGKPPFNKWFLKPLDCEAFHISE 384

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842944|ref|XP_002889353.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335195|gb|EFH65612.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/389 (57%), Positives = 276/389 (70%), Gaps = 24/389 (6%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG+ VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+DL+V+ALGTGTKC+ RSL
Sbjct: 3   EDWGERVSEKVVSAYMSLPKKGKPQGREVTVLSAFLVSSPSQDLKVIALGTGTKCVSRSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNG---IEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q  S+     +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQGMQLTSDKSSEAKRQRLDCETSSVLESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDE---LNGF 172
                 KY+ + G  LH+YISQLPCG AS SS       F++ +    + VD+   +   
Sbjct: 123 SCPGEVKYKLKSGCHLHMYISQLPCGYASTSS------PFYALKKIPSTQVDDSFLVQAS 176

Query: 173 KDGICEASNLNNDDSLQHIGR-------VQRKPGRGDTTLSVSCSDKIARWNAVGVQGAL 225
             G    S++    S  H G        VQRKPGRG+TTLSVSCSDKIARWN +GVQGAL
Sbjct: 177 DIGSSRHSDVPQIGSNSHTGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGAL 236

Query: 226 LSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAA 285
           L   LQPVY+S+ITVG+S +   +F L +HL+RSLY+RILPLS++L + F++NKP+F  A
Sbjct: 237 LCQVLQPVYISTITVGQSLHIPGNFSLADHLRRSLYERILPLSDDLLTSFRLNKPLFFVA 296

Query: 286 SVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCK 345
            V P EFQHSETA +TLTCGYS+CWN SGLHEVILGTTGRKQGTSAKGAL PSTQSS+CK
Sbjct: 297 PVIPSEFQHSETAQATLTCGYSLCWNYSGLHEVILGTTGRKQGTSAKGALYPSTQSSICK 356

Query: 346 NRLLQVFLSLKHESKIRCLAADISYRELK 374
            RLL++FL   H  +     +  SYRELK
Sbjct: 357 QRLLELFLKETHGHERESSKSKKSYRELK 385

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|8671846|gb|AAF78409.1|AC009273_15 Contains similarity to RNA adenosine deaminase gene, exon 15 from Homo sapiens gb|U75503. It contains the adenosine-deaminase (editase) domain PF|02137 [Arabidopsis thaliana]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 236/444 (53%), Positives = 283/444 (63%), Gaps = 59/444 (13%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
           E WG  VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+D +V+ALGTGTKC+  SL
Sbjct: 3   EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPSQDPKVIALGTGTKCVSGSL 62

Query: 64  LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCS---NGIEGLRDDVFNNFLFELGPT 120
           LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q  S   N  +  R D   + + E   +
Sbjct: 63  LSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKSNEAKRQRIDSETSSILESADS 122

Query: 121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDG 175
                 KY+ + G  LHLYISQLPCG AS SS   A +   S + +     D L      
Sbjct: 123 SCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVD-----DSLLVQASD 177

Query: 176 ICEA---------SNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALL 226
           IC +         SN N  +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQGALL
Sbjct: 178 ICSSRHSDVPEIGSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALL 237

Query: 227 SYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAAS 286
              LQPVY+S+ITVG+S ++ ++F L +HL+RSLY+RILPLS+EL + F++NKP+F  A 
Sbjct: 238 YQVLQPVYISTITVGQSLHSPDNFSLADHLRRSLYERILPLSDELLTSFRLNKPLFFVAP 297

Query: 287 VPPEEFQHSETASSTLTCG-----------------------------YSICWNKSGLHE 317
           VPP EFQHSETA +TLTCG                             YS+CWN SGLHE
Sbjct: 298 VPPSEFQHSETAQATLTCGLVFNTLPHMTCVSFLCFLKGGVIYLLALRYSLCWNYSGLHE 357

Query: 318 VILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGA 377
           VILGTTGRKQGTSAKGAL PSTQSS+CK RLL++FL   H  K     +  SYRELK  A
Sbjct: 358 VILGTTGRKQGTSAKGALYPSTQSSICKQRLLELFLKETHGHKRESSKSKKSYRELKVCA 417

Query: 378 QAYNIASKVFKGGPPFNNWPLKPL 401
                 S        FN  PL+ L
Sbjct: 418 MLILFCS--------FNMLPLEQL 433

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	411
TAIR|locus:2198185	420	TAD1 "ortholog of yeast Tad1"	0.980	0.959	0.592	1.3e-118
ZFIN|ZDB-GENE-070410-64	466	adat1 "adenosine deaminase, tR	0.316	0.278	0.435	7.3e-42
RGD|1591020	498	Adat1 "adenosine deaminase, tR	0.540	0.445	0.303	2.4e-39
FB|FBgn0028658	394	adat "adat" [Drosophila melano	0.635	0.662	0.303	6.8e-38
DICTYBASE|DDB_G0278943	545	DDB_G0278943 "adenosine deamin	0.343	0.258	0.385	1.1e-37
MGI|MGI:1353631	499	Adat1 "adenosine deaminase, tR	0.535	0.440	0.313	5.5e-37
UNIPROTKB|F1S456	497	ADAT1 "Uncharacterized protein	0.615	0.509	0.298	2.9e-36
UNIPROTKB|Q5ZI16	503	ADAT1 "tRNA-specific adenosine	0.379	0.310	0.385	1.4e-35
UNIPROTKB|E2RSP3	507	ADAT1 "Uncharacterized protein	0.610	0.495	0.298	2.1e-34
UNIPROTKB|F1N0T4	721	ADARB1 "Uncharacterized protei	0.708	0.403	0.345	5.2e-34

TAIR|locus:2198185 TAD1 "ortholog of yeast Tad1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1168 (416.2 bits), Expect = 1.3e-118, P = 1.3e-118
 Identities = 246/415 (59%), Positives = 297/415 (71%)

Query:     4 ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDLEVVALGTGTKCIGRSL 63
             E WG  VS+KV+  Y SLPKKGKPQGREVTVL+AFL+SSPS+D +V+ALGTGTKC+  SL
Sbjct:     3 EDWGKTVSEKVISAYMSLPKKGKPQGREVTVLSAFLVSSPSQDPKVIALGTGTKCVSGSL 62

Query:    64 LSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCS---NGIEGLRDDVFNNFLFELGPT 120
             LSP GDIVNDSHAE+VARRAL+RFFY+E+   Q  S   N  +  R D   + + E   +
Sbjct:    63 LSPRGDIVNDSHAEVVARRALIRFFYSEIQRMQLTSGKSNEAKRQRIDSETSSILESADS 122

Query:   121 G-----KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSRE-GNSL--SSVDELNGF 172
                   KY+ + G  LHLYISQLPCG AS SS   A +   S +  +SL   + D  +  
Sbjct:   123 SCPGEVKYKLKSGCLLHLYISQLPCGYASTSSPLYALKKIPSTQVDDSLLVQASDICSSR 182

Query:   173 KDGICE-ASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ 231
                + E  SN N  +  Q    VQRKPGRG+TTLSVSCSDKIARWN +GVQGALL   LQ
Sbjct:   183 HSDVPEIGSNSNKGNGSQVADMVQRKPGRGETTLSVSCSDKIARWNVLGVQGALLYQVLQ 242

Query:   232 PVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEE 291
             PVY+S+ITVG+S ++ ++F L +HL+RSLY+RILPLS+EL + F++NKP+F  A VPP E
Sbjct:   243 PVYISTITVGQSLHSPDNFSLADHLRRSLYERILPLSDELLTSFRLNKPLFFVAPVPPSE 302

Query:   292 FQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQV 351
             FQHSETA +TLTCGYS+CWN SGLHEVILGTTGRKQGTSAKGAL PSTQSS+CK RLL++
Sbjct:   303 FQHSETAQATLTCGYSLCWNYSGLHEVILGTTGRKQGTSAKGALYPSTQSSICKQRLLEL 362

Query:   352 FLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
             FL   H  K     +  SYRELK+ A  Y + SK+FKG  PFNNW  KPL  E F
Sbjct:   363 FLKETHGHKRESSKSKKSYRELKNKATEYYLMSKIFKGKYPFNNWLRKPLNCEDF 417

GO:0003723 "RNA binding" evidence=IEA;ISS

GO:0004000 "adenosine deaminase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006396 "RNA processing" evidence=IEA;ISS

ZFIN|ZDB-GENE-070410-64 adat1 "adenosine deaminase, tRNA-specific 1" [Danio rerio (taxid:7955)]

 Score = 254 (94.5 bits), Expect = 7.3e-42, Sum P(2) = 7.3e-42
 Identities = 64/147 (43%), Positives = 87/147 (59%)

Query:     6 WG-DEVSKKVLWQYKSLPKKGKPQ-GREVTVLAAFL-ISS-PSKDL---EVVALGTGTKC 58
             W  DE++      +  LPK+GKP+ GRE T+LAA + I+  P +     +VV+LGTGTKC
Sbjct:     2 WSPDEIASLCYNHFNKLPKRGKPESGREWTLLAAVIQITDCPEQKTVQKQVVSLGTGTKC 61

Query:    59 IGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELG 118
             IGRS +S  GD++NDSHAE++ARR  +R+  TE L K      + G   DVF        
Sbjct:    62 IGRSAMSMKGDVLNDSHAEVIARRGSVRYL-TEQLLK-----AVRGQSSDVF----CAGS 111

Query:   119 PTGKYRFREGWQLHLYISQLPCGDASL 145
               GK+R + G     + SQ PCGDAS+
Sbjct:   112 EKGKWRLKAGVSFLFFTSQTPCGDASI 138

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0006396 "RNA processing" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

RGD|1591020 Adat1 "adenosine deaminase, tRNA-specific 1" [Rattus norvegicus (taxid:10116)]

 Score = 274 (101.5 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
 Identities = 74/244 (30%), Positives = 120/244 (49%)

Query:   178 EASNLNNDDSLQH-IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYL 235
             E  +L    +  H +G ++ KPGRGD T S+SCSDK+ARWN +G QGALL +FL+ P+YL
Sbjct:   261 ETGDLRKPGAAYHQVGLLRVKPGRGDRTCSMSCSDKMARWNVLGCQGALLMHFLEKPIYL 320

Query:   236 SSITVGRSPNTSEDFPLEEHLKRSLYDR-----ILPLSEELSS-PFQVNKPIFLAASVPP 289
             S++ +G+ P +      +E ++R+L  R     +LP   E+     Q +  +F  +    
Sbjct:   321 SAVVIGQCPYS------QEAMRRALTGRCQETLVLPRGFEVQELKIQQSSLLFEQSRCAV 374

Query:   290 EEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLL 349
                +  ++    + CG +I W+      + +   G  QGT+ K   SP  +S + K  L 
Sbjct:   375 HR-KRGDSPGRLVPCGAAISWSAVPQQPLDVTANGFPQGTTKKEIGSPRARSRISKVELF 433

Query:   350 QVFLSL-------KHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLG 402
             + F  L       +    +R +    +Y+E K+ A AY  A    +   PF++W   P  
Sbjct:   434 RSFQKLLSCIAEDERPDSVRWVQKLDTYQEYKEAASAYQEAWSALRRVQPFSSWIRNPPN 493

Query:   403 YEVF 406
             Y  F
Sbjct:   494 YHQF 497

GO:0003723 "RNA binding" evidence=IEA;ISO

GO:0008033 "tRNA processing" evidence=IEA;ISO

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=IEA;ISO

FB|FBgn0028658 adat "adat" [Drosophila melanogaster (taxid:7227)]

 Score = 248 (92.4 bits), Expect = 6.8e-38, Sum P(2) = 6.8e-38
 Identities = 88/290 (30%), Positives = 133/290 (45%)

Query:   123 YRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASNL 182
             Y   E  + H   +Q PCGDA +      P     R+   L    E+     G    S+L
Sbjct:   110 YDMDEHVEFHFLSTQTPCGDACILE-EEQPAARAKRQ--RLDEDSEM--VYTGAKLISDL 164

Query:   183 NNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL-QPVYLSSITVG 241
             ++D  LQ  G ++ KPGRG+ TLS+SCSDKIARWN +GVQGALL   + +P+Y SS+   
Sbjct:   165 SDDPMLQTPGALRTKPGRGERTLSMSCSDKIARWNVIGVQGALLDVLISKPIYFSSLNF- 223

Query:   242 RSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE-EFQHSETASS 300
                   +D  LE  L+R+++ R         + FQ  +P     ++ P   F+ S+  S 
Sbjct:   224 ----CCDDAQLES-LERAIFKRF-DCRTFKHTRFQPQRP---QINIDPGIRFEFSQR-SD 273

Query:   301 TLTCGYSICWNK--SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSL-KH 357
                    + W++    L    +   G++QG + K   +     ++ K +L   FL L K 
Sbjct:   274 WQPSPNGLIWSQVPEELRPYEISVNGKRQGVTKKKMKTSQAALAISKYKLFLTFLELVKF 333

Query:   358 ESKIRCL----AAD---ISYRELKDGAQAYNIASKVFKGGPPFNNWPLKP 400
               K+  +     +D   I+Y   KD A+ Y  A +  K    F  W  KP
Sbjct:   334 NPKLSEMFDQQLSDPERIAYASCKDLARDYQFAWREIKE-KYFLQWTKKP 382

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISS;IDA;NAS

GO:0006400 "tRNA modification" evidence=IDA

GO:0005575 "cellular_component" evidence=ND

GO:0003723 "RNA binding" evidence=IEA

DICTYBASE|DDB_G0278943 DDB_G0278943 "adenosine deaminase acting on tRNA 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 238 (88.8 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
 Identities = 59/153 (38%), Positives = 87/153 (56%)

Query:    19 KSLPKKGKPQGREVTVLAAFLI---SSPSKDL-EVVALGTGTKCIGRSLLSPHGDIVNDS 74
             K L KKGKP   E TVLA  ++   ++ S ++ +V++LGTG +C+G+S LS  GD++NDS
Sbjct:    23 KKLIKKGKPISGEWTVLATLVLVVENTSSYEIKQVLSLGTGNRCLGKSSLSNQGDVLNDS 82

Query:    75 HAEIVARRALLRFFYTEVLN--KQKCSNGIE---GLRDDVFNNFLFEL-GPTGKYRFREG 128
             HAEI+ +R+  +F Y E+LN  + K  N I       D   NN   +  G       ++G
Sbjct:    83 HAEIICKRSFQKFCYNEILNLLQSKYYNSILFNIEYHDSNNNNKDNDNNGSLPTISIKKG 142

Query:   129 WQLHLYISQLPCGDASLSSC--HSAPRNFFSRE 159
               LH Y++Q PCGD S+      + P NF  +E
Sbjct:   143 HSLHFYVNQTPCGDCSIFPFKKETQPENFIEKE 175

GO:0006396 "RNA processing" evidence=IEA

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISS

GO:0008033 "tRNA processing" evidence=IEA;ISS

GO:0006400 "tRNA modification" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

MGI|MGI:1353631 Adat1 "adenosine deaminase, tRNA-specific 1" [Mus musculus (taxid:10090)]

 Score = 264 (98.0 bits), Expect = 5.5e-37, Sum P(2) = 5.5e-37
 Identities = 77/246 (31%), Positives = 119/246 (48%)

Query:   178 EASNLNNDDSLQH-IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYL 235
             E  +L    +  H +G ++ KPGRGD T S+SCSDK+ARWN +G QGALL +FL+ P+YL
Sbjct:   262 ETGDLREPGAAYHQVGLLRVKPGRGDRTCSMSCSDKMARWNVLGCQGALLMHFLEKPIYL 321

Query:   236 SSITVGRSPNTSEDFPLEEHLKRSLYDR-----ILPLS---EELSSPFQVNKPIFLAASV 287
             S++ +G+ P +      +E ++R+L  R     +LP     +EL    Q +  +F  +  
Sbjct:   322 SAVVIGKCPYS------QEAMRRALTGRCEETLVLPRGFGVQELE--IQQSGLLFEQSRC 373

Query:   288 PPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNR 347
                  +  ++    + CG +I W+      + +   G  QGT+ K   SP  +S + K  
Sbjct:   374 AVHR-KRGDSPGRLVPCGAAISWSAVPQQPLDVTANGFPQGTTKKEIGSPRARSRISKVE 432

Query:   348 LLQVFLSL-------KHESKIRCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKP 400
             L + F  L       +    IR      +Y+E KD A AY  A    +   PF +W   P
Sbjct:   433 LFRSFQKLLSSIADDEQPDSIRVTKKLDTYQEYKDAASAYQEAWGALRRIQPFASWIRNP 492

Query:   401 LGYEVF 406
               Y  F
Sbjct:   493 PDYHQF 498

GO:0003723 "RNA binding" evidence=ISO

GO:0004000 "adenosine deaminase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006396 "RNA processing" evidence=IEA

GO:0008033 "tRNA processing" evidence=ISO

GO:0008152 "metabolic process" evidence=ISS

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISO;ISS

GO:0016787 "hydrolase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1S456 ADAT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 264 (98.0 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
 Identities = 84/281 (29%), Positives = 135/281 (48%)

Query:   145 LSSCHSAPRNFFSREGNSLSSVDELNGFKDGI-C---EASNLNNDDSLQH-IGRVQRKPG 199
             ++S H       +  G + S    ++ ++ G  C   EA +L    +  H +G ++ KPG
Sbjct:   225 VNSSHLTAEELATVPGMAHSGAKVVDIYRTGAKCVPGEAGDLGGPGAAYHQVGLLRVKPG 284

Query:   200 RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYLSSITVGRSPNTSEDFPLEEHLKR 258
             RGD T S+SCSDK+ARWN +G QGALL +FL+ PVYLS++ +G+ P +      +E ++R
Sbjct:   285 RGDRTCSMSCSDKLARWNVLGCQGALLMHFLEEPVYLSAVVIGKCPYS------QEAMQR 338

Query:   259 SLYDRILPLSEELSSPFQVNK------PIFLAASVPPEEFQHSETASSTLTCGYSICWNK 312
             +L  R   +S  L   F V +       I    S    + + ++++   + CG +I W+ 
Sbjct:   339 ALIRRCRTISA-LPKGFGVQEVKIQQSDILFEQSRCAVQAKKADSSGRLVPCGAAISWSA 397

Query:   313 SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVF---LSLKHESK----IRCLA 365
                  + +   G  QGT+ K   SP  +S + K  L + F   LS   E K    +R   
Sbjct:   398 VPEQPLDVTANGFPQGTTKKAIGSPQARSRISKVELFRSFQKLLSSVSEDKWPDSLRVQK 457

Query:   366 ADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
                +Y+E K+ A  Y  A +  +    F +W   P  Y  F
Sbjct:   458 LT-TYQEYKEAAATYQEAWRALRK-QAFGSWIRNPPDYHQF 496

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=IEA

GO:0008033 "tRNA processing" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|Q5ZI16 ADAT1 "tRNA-specific adenosine deaminase 1" [Gallus gallus (taxid:9031)]

 Score = 251 (93.4 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
 Identities = 67/174 (38%), Positives = 98/174 (56%)

Query:   191 IGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYLSSITVGRSPNTSED 249
             +G ++ KPGRGD T S+SCSDK+ARWN +G QGALL +FLQ PVYLS++ VG+ P +   
Sbjct:   282 VGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYS--- 338

Query:   250 FPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEE----FQHSETASST--LT 303
                +E ++R++ +R   +S  L   F   +   L + +  E      Q  +T+S    + 
Sbjct:   339 ---QEAMQRAVIERCRHISL-LPDGFLTQEVQLLQSDLQFEHSRQAIQEGQTSSKRKLVP 394

Query:   304 CGYSICWNKSGLHEVILGTT--GRKQGTSAKGALSPSTQSSLCKNRLLQVFLSL 355
             C  +I W  S + E  L  T  G +QGT+ KG  SP ++S +CK  L   F  L
Sbjct:   395 CSAAISW--SAVPEGPLDVTSDGFRQGTTKKGIGSPQSRSKICKVELFHEFQKL 446

GO:0046872 "metal ion binding" evidence=IEA

GO:0003723 "RNA binding" evidence=ISS

GO:0008033 "tRNA processing" evidence=ISS

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=ISS

UNIPROTKB|E2RSP3 ADAT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 247 (92.0 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
 Identities = 85/285 (29%), Positives = 133/285 (46%)

Query:   144 SLSSCHSAPRNFFSREGNSLSSVDELNGFKDGI-C---EASNLNNDDSLQH-IGRVQRKP 198
             S+S  +   +   +  G + S    ++ ++ G  C   EA +     +  H +G ++ KP
Sbjct:   234 SISGSNLTTQELATVTGMAPSGAKVVDVYRTGAKCVPGEAGDSGKPGAAYHQVGLLRVKP 293

Query:   199 GRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQ-PVYLSSITVGRSPNTSEDFPLEEHLK 257
             GRGD T S+SCSDK+ARWN +G QGALL + L+ P+YLS++ +GR P +      +E ++
Sbjct:   294 GRGDRTCSMSCSDKLARWNVLGCQGALLMHLLEKPIYLSAVVIGRCPYS------QEAMQ 347

Query:   258 RSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASST---------LTCGYSI 308
             R+L  R   +S  L   F V +     + +    F+HS  A            + CG +I
Sbjct:   348 RALTGRCQNVSA-LPKGFGVQEVKIQQSGLL---FEHSRCAVQAKRADGPGRLVPCGAAI 403

Query:   309 CWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVF---LSLKHESK----I 361
              W+      + +   G  QGT+ KG      +S + K  L + F   LS   E K    +
Sbjct:   404 SWSAVPEQPLDVTANGFPQGTTKKGIRCLQARSRISKVELFRSFQKLLSSISEDKWPDSL 463

Query:   362 RCLAADISYRELKDGAQAYNIASKVFKGGPPFNNWPLKPLGYEVF 406
             R    + +Y E K+ A AY  A  V +    F +W   P  Y  F
Sbjct:   464 RVQKLE-TYHEYKEAASAYQEAWSVLRK-QAFGSWIRNPSDYHQF 506

GO:0008251 "tRNA-specific adenosine deaminase activity" evidence=IEA

GO:0008033 "tRNA processing" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|F1N0T4 ADARB1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 377 (137.8 bits), Expect = 5.2e-34, P = 5.2e-34
 Identities = 113/327 (34%), Positives = 172/327 (52%)

Query:     8 DEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIGRSLL 64
             D V++ VL ++  L      P  R   VLA  ++++ +  KD +V+++ TGTKCI    +
Sbjct:   343 DAVARLVLDKFGDLTDSFASPHARR-KVLAGIVMTTGTDVKDAKVISISTGTKCINGEYM 401

Query:    65 SPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYR 124
             S  G  +ND HAEI+ARR+LLRF YT++    K SN     +DD   + +FE    G ++
Sbjct:   402 SDRGLALNDCHAEIIARRSLLRFLYTQLEIYLK-SNS----KDDQKRS-IFEKSERGGFK 455

Query:   125 FREGWQLHLYISQLPCGDASLSSCHSAP-RNFFSREGNSLSSVDELNGFKDGICEAS-NL 182
              +E  Q HLYIS  PCGDA + S H         R  N  +        + G  E +  +
Sbjct:   456 LKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIESG--EGTIPV 513

Query:   183 NNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGR 242
              ++ S+Q    V +    G+  L++SCSDK+ARWN VG+QG+LLS F++P+Y SSI +G 
Sbjct:   514 RSNASVQTWDGVLQ----GERLLTMSCSDKMARWNVVGIQGSLLSIFVEPIYFSSIILGS 569

Query:   243 SPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTL 302
               +        +HL R++Y RI  + E+L   + +NKP+    S       ++E      
Sbjct:   570 LYHG-------DHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS-------NAEARQPGK 614

Query:   303 TCGYSICWN--KSGLHEVILGTTGRKQ 327
                +S+ W    S L EVI  TTG+ +
Sbjct:   615 APNFSVNWTVGDSAL-EVINATTGKDE 640

GO:0051726 "regulation of cell cycle" evidence=IEA

GO:0045070 "positive regulation of viral genome replication" evidence=IEA

GO:0044387 "negative regulation of protein kinase activity by regulation of protein phosphorylation" evidence=IEA

GO:0030336 "negative regulation of cell migration" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0006396 "RNA processing" evidence=IEA

GO:0006382 "adenosine to inosine editing" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003726 "double-stranded RNA adenosine deaminase activity" evidence=IEA

GO:0003725 "double-stranded RNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9V3R6	ADAT1_DROME	3, ., 5, ., 4, ., -	0.3292	0.8686	0.9060	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.4	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00026806001 SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (453 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	411
pfam02137	329	pfam02137, A_deamin, Adenosine-deaminase (editase)	1e-102
smart00552	374	smart00552, ADEAMc, tRNA-specific and double-stran	1e-100

>gnl|CDD|216895 pfam02137, A_deamin, Adenosine-deaminase (editase) domain

 Score =  305 bits (784), Expect = e-102
 Identities = 134/362 (37%), Positives = 176/362 (48%), Gaps = 45/362 (12%)

Query: 51  ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVF 110
           +LGTGTKC+G   LS  GDI++D HAEI+ARR  LRF Y ++L         EG    +F
Sbjct: 1   SLGTGTKCLGGEHLSNDGDILHDCHAEILARRGFLRFLYEQLLLLNS-----EGKESSIF 55

Query: 111 NNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSA-------PRNFFSREGNSL 163
                     GK+R + G  LHLYIS  PCGDAS+ S           P +  +R+    
Sbjct: 56  E----RGIEEGKFRLKPGVSLHLYISTAPCGDASIFSPAEGLLDSELEPDSHPNRQARGQ 111

Query: 164 SSVDELNGFKDGICEASNLNNDDSLQHIGRVQRKPGR--GDTTLSVSCSDKIARWNAVGV 221
                  G      + S+          G V+ KPGR  G+ TLS+SCSDK+ARWN +GV
Sbjct: 112 LRTKIERGRGTIPVKGSD----------GVVRTKPGRLDGERTLSMSCSDKLARWNVLGV 161

Query: 222 QGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPI 281
           QGALLS+F++P+YLSSI +G   ++      +EHL+R+   R+  L   L  PF VN P 
Sbjct: 162 QGALLSHFIEPIYLSSIVLGSLNHS------QEHLERAFCGRLEGLLSSLPLPFLVNHPE 215

Query: 282 FLAASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQS 341
           F  +S         ET   T     S+ W+     EV+    GRK GT+ K  LS    S
Sbjct: 216 FSLSS-------KDETRQKTKPSPLSLNWSLGDDIEVLDALNGRKNGTTPKP-LSKGGPS 267

Query: 342 SLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKG--GPPFNNWPLK 399
            LCK  L   F  L  + K + +    +Y E K+ A  Y  A K  K         W  K
Sbjct: 268 RLCKAALFARFKKLLKKLK-KEVLLAKTYAEAKEAASEYQEAKKQLKSALEAGLGGWISK 326

Query: 400 PL 401
           PL
Sbjct: 327 PL 328

Adenosine deaminases acting on RNA (ADARs) can deaminate adenosine to form inosine. In long double-stranded RNA, this process is non-specific; it occurs site-specifically in RNA transcripts. The former is important in defence against viruses, whereas the latter may affect splicing or untranslated regions. They are primarily nuclear proteins, but a longer isoform of ADAR1 is found predominantly in the cytoplasm. ADARs are derived from the Tad1-like tRNA deaminases that are present across eukaryotes. These in turn belong to the nucleotide/nucleic acid deaminase superfamily and are characterized by a distinct insert between the two conserved cysteines that are involved in binding zinc. Length = 329

>gnl|CDD|214718 smart00552, ADEAMc, tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)

 Score =  301 bits (774), Expect = e-100
 Identities = 148/409 (36%), Positives = 209/409 (51%), Gaps = 43/409 (10%)

Query: 6   WGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPSKDL-EVVALGTGTKCIGRSLL 64
            GDE+S+ VL ++ SLPK GKP  RE T+LA  ++++   +  +VV+LGTGTKCI    L
Sbjct: 2   TGDEISQLVLEKFGSLPKIGKPGLREWTILAGVVMTNGMDNEKQVVSLGTGTKCISGEKL 61

Query: 65  SPHGDIVNDSHAEIVARRALLRFFYTEVLN-KQKCSNGIEGLRDDVFNNFLFELGPTG-K 122
           SP+G ++ND HAEI+ARR  LRF Y+E+        + I            FE    G K
Sbjct: 62  SPNGLVLNDCHAEILARRGFLRFLYSELQLFNSSSEDSI------------FEKNKEGGK 109

Query: 123 YRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASNL 182
           Y+ +     HLYIS LPCGDAS+ S     +N  S+     +        K  I E +  
Sbjct: 110 YKLKSNVLFHLYISTLPCGDASIFSPLEPLKNDDSKHPVRKNIKRSKLRTKIEIGEGTV- 168

Query: 183 NNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGR 242
                   I +     G G+  LS+SCSDKIARWN +GVQGALLS+F++P+YLSSI +G+
Sbjct: 169 --PVRSSDIVQTWDGIGDGERLLSMSCSDKIARWNVLGVQGALLSHFIEPIYLSSIVLGK 226

Query: 243 SPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTL 302
           S  ++      EHL+R+LY R+ PL     +PF+VN+P+    SV        +TA S  
Sbjct: 227 SLYSA------EHLERALYGRLDPLDGLP-TPFRVNRPLISLVSVADF---QRQTAKSPN 276

Query: 303 TCGYSICWNK-SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKI 361
               S+ W++     E++ G TG+ Q +         + S LCK  L ++F  L      
Sbjct: 277 F---SVNWSQGDESLEILNGLTGKTQKSL-------GSPSRLCKKALFRLFQKL-CSKLK 325

Query: 362 RCLAADISYRELKDGAQAYNIASKVFKGG---PPFNNWPLKPLGYEVFF 407
           R     ISY E K+ A  Y  A ++           +W  KP   + F 
Sbjct: 326 RDDLLHISYAEAKEAASEYQEAKQLLFEALNKAGLGSWIKKPPEQDQFK 374

Length = 374

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	411
smart00552	374	ADEAMc tRNA-specific and double-stranded RNA adeno	100.0
KOG2777	542	consensus tRNA-specific adenosine deaminase 1 [RNA	100.0
PF02137	343	A_deamin: Adenosine-deaminase (editase) domain; In	100.0

>smart00552 ADEAMc tRNA-specific and double-stranded RNA adenosine deaminase (RNA-specific editase)

Probab=100.00  E-value=1.2e-97  Score=749.87  Aligned_cols=365  Identities=40%  Similarity=0.617  Sum_probs=289.1

Q ss_pred             chHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEEeeCC-CCeEEEEEecCCCccCCCccCCCCCcccchHHHHHHHHH
Q 015229            5 CWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSPS-KDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRA   83 (411)
Q Consensus         5 ~~ad~Ia~~v~~~y~~L~~~gkP~~~ewtvlA~iV~~~~~-~~~~vvslgTG~Kc~~~~~l~~~G~~lhD~HAEVLARR~   83 (411)
                      .|||+||++|+++|++||++|||..+||||||||||+++. ++++||||||||||+|+++++.+|.+|||||||||||||
T Consensus         1 ~~~d~Ia~~v~~~y~~L~k~~kp~~~e~tvLA~iV~~~~~~~~~~vvslgTGtKc~~~~~~~~~G~~lhD~HAEVlArR~   80 (374)
T smart00552        1 DTGDEISQLVLEKFGSLPKIGKPGLREWTILAGVVMTNGMDNEKQVVSLGTGTKCISGEKLSPNGLVLNDCHAEILARRG   80 (374)
T ss_pred             CHHHHHHHHHHHHHHhhhhcCCCCCCCceeEEEEEEEecCCCceEEEEEecCccccchhhhccCCCEEEeCCHHHHHHHH
Confidence            4799999999999999999999999999999999999873 379999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCcccccCCCCCeeeeeCCC-CceEeeCCcEEEEEeccCCCCccccccCcCCCCCccccCCCC
Q 015229           84 LLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT-GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNS  162 (411)
Q Consensus        84 f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~-g~~~Lk~~v~~hLYiS~~PCGDAsi~~~~~~~~~~~~~~~~~  162 (411)
                      |+||||+||+.+.++          . .+.||+..++ ++|+||+||+||||||++|||||||+.+.....+..    ..
T Consensus        81 f~r~l~~el~~~~~~----------~-~~sif~~~~~~~~~~Lk~~v~lhlYiS~~PCGdAs~~~~~~~~~~~~----~~  145 (374)
T smart00552       81 FLRFLYSELQLFNSS----------S-EDSIFEKNKEGGKYKLKSNVLFHLYISTLPCGDASIFSPLEPLKNDD----SK  145 (374)
T ss_pred             HHHHHHHHHHHHhcc----------C-CCceEEECCCCCceEeCCCcEEEEEeccCCccccccccccccccccc----cc
Confidence            999999999987532          1 3457776554 499999999999999999999999997654322210    00


Q ss_pred             CCCccc-cCCcccceeeccCCCCCCCccccceeecCCCCC--CccceechhhHHHHHHHhhhhhhHhhhccccceeceEE
Q 015229          163 LSSVDE-LNGFKDGICEASNLNNDDSLQHIGRVQRKPGRG--DTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSIT  239 (411)
Q Consensus       163 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~vRtKPGRg--d~t~SmSCSDKLarWnvlGlQGaLLS~~iePIYl~siv  239 (411)
                      .+.... ..+...+..  ....+..+++..|+||||||||  ++|+||||||||||||||||||||||||||||||+|||
T Consensus       146 ~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~vrtkpgr~~~~~t~smSCSDKlarwnvlGlQGaLls~~i~PiYlssiv  223 (374)
T smart00552      146 HPVRKNIKRSKLRTKI--EIGEGTVPVRSSDIVQTWDGIGDGERLLSMSCSDKIARWNVLGVQGALLSHFIEPIYLSSIV  223 (374)
T ss_pred             cccccccccccccccc--cccCCcccccccCccccCCCCCCCCcccccchhHHHHHHHHhhcchHHHHHHhhhhhheeEE
Confidence            000000 000000000  0112233577889999999998  57999999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcchHHHHhhhhhcccccccccCCCCceeccceEEecCCCCcccccCccccCccCCcccEEeeCCCc-cee
Q 015229          240 VGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSGL-HEV  318 (411)
Q Consensus       240 vg~~~~~~~~~~~~~~l~RAl~~R~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~si~W~~~~~-~Ev  318 (411)
                      ||....      .+++|+|||++|+.++ ..+|.||.+++|++...+  ..+|+.   ...+.+ ..|++|+.++. .|+
T Consensus       224 vg~~~~------~~~~l~Ra~~~R~~~~-~~l~~~~~~~~p~~~~~~--~~~~~~---~~~~s~-~~Sl~W~~~~~~~ev  290 (374)
T smart00552      224 LGKSLY------SAEHLERALYGRLDPL-DGLPTPFRVNRPLISLVS--VADFQR---QTAKSP-NFSVNWSQGDESLEI  290 (374)
T ss_pred             ecCccC------CHHHHHHHHHhhhccc-ccCCCccccccceeeccC--cccccc---cCCCCC-CCeEEEEeCCCcEEE
Confidence            996322      2579999999999877 578899999999976543  234421   111222 23899997654 899


Q ss_pred             eeCCCCcccCcCCCCCCCCCCccHHHHHHHHHHHHHhhhhhhhcccCCCCcHHHHHhchHHHHHHHHHhhc---CCCCCC
Q 015229          319 ILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKG---GPPFNN  395 (411)
Q Consensus       319 i~~~~G~k~G~~~K~~~~~~~~SrlcK~~l~~~f~~l~~~~~~~~~~~~~tY~e~K~~a~~Yq~ak~~l~~---~~~~g~  395 (411)
                      ++|.+|++++       .++++|+|||++||++|.+|.......... ..||.|+|.++.+||++|+.|+.   +.+||+
T Consensus       291 ~ng~~G~~~~-------~~~~~S~lcK~~l~~~f~~l~~~~~~~~~~-~~sY~e~K~~a~~Yq~aK~~l~~~l~~~~~g~  362 (374)
T smart00552      291 LNGLTGKTQK-------SLGSPSRLCKKALFRLFQKLCSKLKRDDLL-HISYAEAKEAASEYQEAKQLLFEALNKAGLGS  362 (374)
T ss_pred             EECcCCeECC-------CCCCccHHHHHHHHHHHHHHHHhhcccccC-cCCHHHHHHhHHHHHHHHHHHHHHHhHhhCCC
Confidence            9999998873       256789999999999999998776544332 38999999999999999965543   347999


Q ss_pred             CCcCCCCCCCcc
Q 015229          396 WPLKPLGYEVFF  407 (411)
Q Consensus       396 W~~kp~~~~~F~  407 (411)
                      |++||+++++|+
T Consensus       363 W~~KP~e~~~F~  374 (374)
T smart00552      363 WIKKPPEQDQFK  374 (374)
T ss_pred             cccCCCchhccC
Confidence            999999999995

>KOG2777 consensus tRNA-specific adenosine deaminase 1 [RNA processing and modification]

Probab=100.00  E-value=1.7e-88  Score=694.59  Aligned_cols=363  Identities=38%  Similarity=0.575  Sum_probs=290.3

Q ss_pred             CchHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEEee-CCCCeEEEEEecCCCccCCCccCCCCCcccchHHHHHHHH
Q 015229            4 ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISS-PSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARR   82 (411)
Q Consensus         4 ~~~ad~Ia~~v~~~y~~L~~~gkP~~~ewtvlA~iV~~~-~~~~~~vvslgTG~Kc~~~~~l~~~G~~lhD~HAEVLARR   82 (411)
                      ..++|+||++|+++|++|+++|+|..+|||||||||+.. ...+.+||||||||||++++.|+.+|.+||||||||||||
T Consensus       172 ~~~~~~Ia~lv~~kF~~L~k~~kp~~~~~tvLAgvv~~~~~~~~~~VVslgTGtKcv~g~~ls~~G~iLnDcHAEIlARR  251 (542)
T KOG2777|consen  172 STLGDEIAELVLEKFDELTKNGKPIPREWTVLAGVVMTKRDGEDKKVVSLGTGTKCVSGDKLSPNGLILNDCHAEILARR  251 (542)
T ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhhhhcccccccceEEEeeccCcccCcceeCCCCCeeecccHHHHHHH
Confidence            368999999999999999999999999999999999987 3567899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCcccccCCCCCeeeeeCCC-CceEeeCCcEEEEEeccCCCCccccccCcCCCCCccccCCC
Q 015229           83 ALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPT-GKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGN  161 (411)
Q Consensus        83 ~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~-g~~~Lk~~v~~hLYiS~~PCGDAsi~~~~~~~~~~~~~~~~  161 (411)
                      ||+||||+||+.+...           ..+.||+..++ ++|+||+||.||||||++|||||+++.......+.      
T Consensus       252 ~llRfLy~eL~l~~~~-----------~~~Sif~~~~~~~~~~LK~nv~fhLYiS~~PCGdA~i~~~~~~~~~~------  314 (542)
T KOG2777|consen  252 GLLRFLYSELQLYNSE-----------KKDSIFEKSKEGGKFTLKENVLFHLYISTSPCGDARIFLPSEPATKK------  314 (542)
T ss_pred             HHHHHHHHHHHHhhcc-----------CCCceeeecCCCCceecCCCcEEEEEecCCCCCchhhhCcccccccc------
Confidence            9999999999998542           13457775554 46999999999999999999999998654321110      


Q ss_pred             CCCCccccCCcccceeeccCCCCCCCccccceeecCCCC--CCccceechhhHHHHHHHhhhhhhHhhhccccceeceEE
Q 015229          162 SLSSVDELNGFKDGICEASNLNNDDSLQHIGRVQRKPGR--GDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSIT  239 (411)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vRtKPGR--gd~t~SmSCSDKLarWnvlGlQGaLLS~~iePIYl~siv  239 (411)
                      .+.......+.-++..  ....++..+...++|||||||  |++++||||||||+|||||||||||||||++||||+|||
T Consensus       315 ~~~~~~~~~~~~~~~~--~~g~g~~~~~~~~~V~T~~Gr~~ger~~smSCSDKLaRWNVLGvQGALLsh~lePIYlssIv  392 (542)
T KOG2777|consen  315 LKHVNSTRRGQLRTKI--ESGEGTIPVGSPDAVQTKPGRLDGERLLSMSCSDKLARWNVLGVQGALLSHFLEPIYLSSIV  392 (542)
T ss_pred             CCCCCchhhhccchhh--hccccccccCCCCcccccCCcccCceeeEechHHHHHHHHHHhhHHHHHHHhhccceeeeeE
Confidence            0000001111111111  112334467778999999999  999999999999999999999999999999999999999


Q ss_pred             eCCCCCCCCCcchHHHHhhhhhcccccccccCCCCceeccceEEecCCCCcccccCccccCccCCcccEEeeCCC-ccee
Q 015229          240 VGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKSG-LHEV  318 (411)
Q Consensus       240 vg~~~~~~~~~~~~~~l~RAl~~R~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~si~W~~~~-~~Ev  318 (411)
                      ||...++      .++|.|||+.|+......+|.||.+|.|.+...+  +.+ +     ++...+++|+||+.+. ..||
T Consensus       393 lg~~~~~------~~~L~rAi~~R~~~~~~~lp~~~~~n~p~~~~v~--~~~-r-----~~~~~~~~slnW~~~~~~~ev  458 (542)
T KOG2777|consen  393 LGKSLHS------PEHLSRAIHGRLSNFLGNLPPPYILNPPLLSRVS--DAE-R-----QPGKMTPFSLNWSLGDYDLEV  458 (542)
T ss_pred             eccccCC------HHHHHHHHhcccccccCCCCCceeecCcccccCC--HhH-h-----ccccCCceeeeeecCCcceEe
Confidence            9964432      4699999999998833348899999998876643  222 1     2223344899999876 7888


Q ss_pred             eeCCCCcccCcCCCCCCCCCCccHHHHHHHHHHHHHhhhhhhhcccCCCCcHHHHHhchHHHHHHHHHhhc---CCCCCC
Q 015229          319 ILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRCLAADISYRELKDGAQAYNIASKVFKG---GPPFNN  395 (411)
Q Consensus       319 i~~~~G~k~G~~~K~~~~~~~~SrlcK~~l~~~f~~l~~~~~~~~~~~~~tY~e~K~~a~~Yq~ak~~l~~---~~~~g~  395 (411)
                      ++..+|++-+         +.+|||||++||..|..+......... ...+|.++|..+++||.+|++|..   +.+||+
T Consensus       459 ~d~~~G~~~~---------~~~srlcK~~~~~~~~~l~~~~~~~~~-~~~~y~~ak~~~k~yq~ak~~l~~~Lk~~glG~  528 (542)
T KOG2777|consen  459 NDVTTGRTSL---------GSASRLCKASLFEAFRKLHGLLPKLLL-LPLSYGEAKAEAKEYQSAKKQLKKALKQAGLGN  528 (542)
T ss_pred             cccccCcccC---------CCccHHHHHHHHHHHHHHHHhhccccc-cchhHHHHHHHhHHHHHHHHHHHHHHHHcccCc
Confidence            8888887432         247999999999999999888754433 456899999999999999887653   359999


Q ss_pred             CCcCCCCCCCcccc
Q 015229          396 WPLKPLGYEVFFQG  409 (411)
Q Consensus       396 W~~kp~~~~~F~~~  409 (411)
                      |++||+|+++|++.
T Consensus       529 Wi~KP~e~~~F~l~  542 (542)
T KOG2777|consen  529 WIRKPPELDQFTLA  542 (542)
T ss_pred             CccCChhhhccccC
Confidence            99999999999863

>PF02137 A_deamin: Adenosine-deaminase (editase) domain; InterPro: IPR002466 Editase (3

Probab=100.00  E-value=1.1e-85  Score=660.70  Aligned_cols=335  Identities=40%  Similarity=0.649  Sum_probs=183.4

Q ss_pred             EEecCCCccCCCccCCCCCcccchHHHHHHHHHHHHHHHHHHHhhhccCCCCcccccCCCCCeeeeeC--CCCceEeeCC
Q 015229           51 ALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELG--PTGKYRFREG  128 (411)
Q Consensus        51 slgTG~Kc~~~~~l~~~G~~lhD~HAEVLARR~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~--~~g~~~Lk~~  128 (411)
                      ||||||||+|.++++.+|++||||||||||||||+||||+||+.+.....      .+ ....||+..  .+++|+||+|
T Consensus         1 SLgTGtKcl~~~~~~~~G~~lhD~HAEVLARR~f~r~L~~el~~~~~~~~------~~-~~~sif~~~~~~~~~~~Lk~~   73 (343)
T PF02137_consen    1 SLGTGTKCLPASKLSSDGRVLHDCHAEVLARRAFLRFLYEELELLLSGGS------GD-KESSIFERNPDGSGKFRLKPG   73 (343)
T ss_dssp             EEEE---B--GGG--TTS-S-SB--HHHHHHHHHHHHHHHHHHHHHH-HH-------H-HHHSSEEE-TTSS--EEE-TT
T ss_pred             CccCCCcccCchhcccCCCEEeeCcHHHHHHHHHHHHHHHHHHHHhcCCC------cc-ccCceEeecCCCCceeEeCCC
Confidence            79999999999999999999999999999999999999999999864210      00 123466654  5679999999


Q ss_pred             cEEEEEeccCCCCccccccCcCCCCCcccc-CCCCCCCcc-ccCCcccceeec---cCCCCCCCccccceeecCCCCCCc
Q 015229          129 WQLHLYISQLPCGDASLSSCHSAPRNFFSR-EGNSLSSVD-ELNGFKDGICEA---SNLNNDDSLQHIGRVQRKPGRGDT  203 (411)
Q Consensus       129 v~~hLYiS~~PCGDAsi~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~g~vRtKPGRgd~  203 (411)
                      |+||||||++|||||||+.+...+.+.... +.+...... ...+.  ....+   ....++..|+.+|++||||||||+
T Consensus        74 v~lhlY~S~~PCGdAsi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~RtKPgrgd~  151 (343)
T PF02137_consen   74 VKLHLYISQAPCGDASIFPLSSSPWESDPPPESDAQSPLRTKITGA--KTVPGEPSDPLRGRANYQQLGIVRTKPGRGDR  151 (343)
T ss_dssp             EEEEEEESS--TTHHHHS-TT--------------TT--EEEETSS--SEEE--SS----------HHHHH-----TT--
T ss_pred             eEEEEEeccCccCccccccccccccccccccccccccccccccCCC--cccCCCccccccccccccCCceeeeeccccCC
Confidence            999999999999999999765421110000 000000000 00000  01111   113456789999999999999999


Q ss_pred             cceechhhHHHHHHHhhhhhhHhhhccccceeceEEeCCCCCCCCCcchHHHHhhhhhcccccccccCCCCceeccceEE
Q 015229          204 TLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFL  283 (411)
Q Consensus       204 t~SmSCSDKLarWnvlGlQGaLLS~~iePIYl~sivvg~~~~~~~~~~~~~~l~RAl~~R~~~~~~~l~~~~~~~~p~~~  283 (411)
                      +.|||||||||+||||||||||||||||||||++||||..+.    + .+++|+|||++|+......+|.||+++.|++.
T Consensus       152 ~~smSCSDKLarW~vlGlQGaLLS~llePiylssivvg~~~~----~-~~~~l~RA~~~R~~~~~~~l~~~~~~~~p~~~  226 (343)
T PF02137_consen  152 TPSMSCSDKLARWNVLGLQGALLSHLLEPIYLSSIVVGDCPK----F-SQEALRRAFCGRLKSLSSRLPPPYRVNPPLIF  226 (343)
T ss_dssp             -EEE-HHHHHHHHHHH-SSHHHHHTTB----EEEEEES--SS-------HHHHHHHHTGGG-TT-----TT------EEE
T ss_pred             CcceecccHHHHHHHhccccccHHHhcccceeeEEEEecCCC----C-CHHHHHhhhhcccccccccCCCCceecCccee
Confidence            999999999999999999999999999999999999997642    1 24799999999995555677899999999887


Q ss_pred             ecCCCCcccccCccccCccCCcccEEeeCCCcceeeeCCCCcccCcCCCCCCCCCCccHHHHHHHHHHHHHhhhhhhhcc
Q 015229          284 AASVPPEEFQHSETASSTLTCGYSICWNKSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIRC  363 (411)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~si~W~~~~~~Evi~~~~G~k~G~~~K~~~~~~~~SrlcK~~l~~~f~~l~~~~~~~~  363 (411)
                      ..... .............++++||+|+..+..|+++  +|+++|.++|+...++++|+|||++||+.|.+|...+....
T Consensus       227 ~~~~~-~~~~~~~~~~~~~~s~~Si~W~~~~~~~i~~--~g~k~G~~~k~~~~~~~~S~lck~~l~~~f~~l~~~~~~~~  303 (343)
T PF02137_consen  227 FSSSR-FSDSSASSSEKAKPSNLSINWCASGEEEIEV--NGVKQGRSKKKSPSPKAASRLCKAALFELFLQLLKALNRSD  303 (343)
T ss_dssp             -------E-SS------S---SEEEEEET-T-SS-EE--EETTTTE-----ETTS---TTSHHHHHHHHHHHHCCS-SS-
T ss_pred             ecccc-cccccccccCCCCCCCceEEEEecCCcEEEE--eCCCCCcccccCCCCCccCcccHHHHHHHHHHHHHhhcccc
Confidence            43210 0122233345567889999999855667776  99999999888888999999999999999999987766555


Q ss_pred             cCCCCcHHHHHhchHHHHHHHHHhhcC-CCCCCCCcCCCC
Q 015229          364 LAADISYRELKDGAQAYNIASKVFKGG-PPFNNWPLKPLG  402 (411)
Q Consensus       364 ~~~~~tY~e~K~~a~~Yq~ak~~l~~~-~~~g~W~~kp~~  402 (411)
                      +....||+++|.++.+||++|+.|+.. .+|++|++||+|
T Consensus       304 ~~~~~tY~~~K~~a~~Y~~ak~~l~~~~~~~~~W~~k~~e  343 (343)
T PF02137_consen  304 LKSSKTYYEAKRAASDYQEAKQQLKSAQQGLGGWIRKPPE  343 (343)
T ss_dssp             -SS--SHHHHHHT-HHHHHHHHHHHHHHTTS-------GG
T ss_pred             CCCcccHHHHHHCHHHHHHHHHHHHhhhccCCCCCCCCCC
Confidence            556679999999999999999999875 789999999976

5 from EC) are enzymes that alter mRNA by catalyzing the site-selective deamination of adenosine residue into inosine residue. The editase domain contains the active site and binds three Zn atoms []. Several editases share a common global arrangement of domains, from N to C terminus: two 'double-stranded RNA-specific adenosine deaminase' (DRADA) repeat domains (IPR000607 from INTERPRO), followed by three 'double-stranded RNA binding' (DsRBD) domains (IPR001159 from INTERPRO), followed by the editase domain. Other editases have a simplified domains structure with no DRADA_REP and possibly fewer DSRBD domains. Editase that deaminate cytidine are not detected by this signature.; GO: 0003723 RNA binding, 0004000 adenosine deaminase activity, 0006396 RNA processing; PDB: 1ZY7_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	411
1zy7_A	403	Crystal Structure Of The Catalytic Domain Of An Ade		1e-36

>pdb|1ZY7|A Chain A, Crystal Structure Of The Catalytic Domain Of An Adenosine Deaminase That Acts On Rna (hadar2) Bound To Inositol Hexakisphosphate (ihp) Length = 403

Iteration: 1
 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 196/426 (46%), Gaps = 72/426 (16%)
Query: 4   ECWGDEVSKKVLWQYKSLPKK-GKPQGREVTVLAAFLISSPS--KDLEVVALGTGTKCIG 60
           +   D VS+ VL ++  L      P  R   VLA  ++++ +  KD +V+++ TGTKCI 
Sbjct: 23  QVLADAVSRLVLGKFGDLTDNFSSPHARR-KVLAGVVMTTGTDVKDAKVISVSTGTKCIN 81
Query: 61  RSLLSPHGDIVNDSHAEIVARRALLRFFYTEV---LNKQKCSNGIEGLRDDVFNNFLFEL 117
              +S  G  +ND HAEI++RR+LLRF YT++   LN +           D     +F+ 
Sbjct: 82  GEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNK-----------DDQKRSIFQK 130
Query: 118 GPTGKYRFREGWQLHLYISQLPCGDASLSSCHS------APRNFFSR-EGNSLSSVDELN 170
              G +R +E  Q HLYIS  PCGDA + S H       A R+   +  G   + ++   
Sbjct: 131 SERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIESGE 190
Query: 171 GFKDGICEASNLNNDDSLQHIGRVQRKPGRGDTTLSVSCSDKIARWNAVGVQGALLSYFL 230
           G       AS    D  LQ           G+  L++SCSDKIARWN VG+QG+LLS F+
Sbjct: 191 GTIPVRSNASIQTWDGVLQ-----------GERLLTMSCSDKIARWNVVGIQGSLLSIFV 239
Query: 231 QPVYLSSITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPE 290
           +P+Y SSI +G            +HL R++Y RI  + E+L   + +NKP+    S    
Sbjct: 240 EPIYFSSIILG-------SLYHGDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGIS---- 287
Query: 291 EFQHSETASSTLTCGYSICWN-KSGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLL 349
              ++E         +S+ W       EVI  TTG+ +   A         S LCK+ L 
Sbjct: 288 ---NAEARQPGKAPNFSVNWTVGDSAIEVINATTGKDELGRA---------SRLCKHALY 335
Query: 350 QVFLSLKHESKIRCLAADIS----YRELKDGAQAYNIA-----SKVFKGGPPFNNWPLKP 400
             ++ +  +     L + I+    Y E K  A+ Y  A     +   K G     W  KP
Sbjct: 336 CRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAG--LGAWVEKP 393
Query: 401 LGYEVF 406
              + F
Sbjct: 394 TEQDQF 399
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	411
1zy7_A	403	RNA-specific adenosine deaminase B1, isoform drada	2e-89

>1zy7_A RNA-specific adenosine deaminase B1, isoform drada2A; alpha/beta deaminase motif, zinc coordination, ionsitol hexakisphosphate, hydrolase; HET: IHP; 1.70A {Homo sapiens} Length = 403

 Score =  275 bits (704), Expect = 2e-89
 Identities = 117/415 (28%), Positives = 184/415 (44%), Gaps = 50/415 (12%)

Query: 4   ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLIS--SPSKDLEVVALGTGTKCIGR 61
           +   D VS+ VL ++  L            VLA  +++  +  KD +V+++ TGTKCI  
Sbjct: 23  QVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCING 82

Query: 62  SLLSPHGDIVNDSHAEIVARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTG 121
             +S  G  +ND HAEI++RR+LLRF YT++       +  +          +F+    G
Sbjct: 83  EYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYLNNKDDQK--------RSIFQKSERG 134

Query: 122 KYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGNSLSSVDELNGFKDGICEASN 181
            +R +E  Q HLYIS  PCGDA + S H       +    +  +  +L    +       
Sbjct: 135 GFRLKENVQFHLYISTSPCGDARIFSPHEPILEEPADRHPNRKARGQLRTKIESGEGTIP 194

Query: 182 LNNDDSLQHIGRVQRKPGR--GDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLSSIT 239
           + ++ S      +Q   G   G+  L++SCSDKIARWN VG+QG+LLS F++P+Y SSI 
Sbjct: 195 VRSNAS------IQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFSSII 248

Query: 240 VGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETAS 299
           +G   +        +HL R++Y RI  +  +L   + +NKP+            ++E   
Sbjct: 249 LGSLYH-------GDHLSRAMYQRISNIE-DLPPLYTLNKPLL-------SGISNAEARQ 293

Query: 300 STLTCGYSICWNK-SGLHEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHE 358
                 +S+ W       EVI  TTG+ +   A         S LCK+ L   ++ +  +
Sbjct: 294 PGKAPNFSVNWTVGDSAIEVINATTGKDELGRA---------SRLCKHALYCRWMRVHGK 344

Query: 359 SKIRCLAAD----ISYRELKDGAQAYNIASKVFKGGP---PFNNWPLKPLGYEVF 406
                L +       Y E K  A+ Y  A               W  KP   + F
Sbjct: 345 VPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQF 399

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	411
1zy7_A	403	RNA-specific adenosine deaminase B1, isoform drada	100.0

>1zy7_A RNA-specific adenosine deaminase B1, isoform drada2A; alpha/beta deaminase motif, zinc coordination, ionsitol hexakisphosphate, hydrolase; HET: IHP; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.3e-93  Score=723.46  Aligned_cols=365  Identities=33%  Similarity=0.519  Sum_probs=284.8

Q ss_pred             CchHHHHHHHHHHHHhcCCCCCCCCCCCcceEEEEEEeeC--CCCeEEEEEecCCCccCCCccCCCCCcccchHHHHHHH
Q 015229            4 ECWGDEVSKKVLWQYKSLPKKGKPQGREVTVLAAFLISSP--SKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVAR   81 (411)
Q Consensus         4 ~~~ad~Ia~~v~~~y~~L~~~gkP~~~ewtvlA~iV~~~~--~~~~~vvslgTG~Kc~~~~~l~~~G~~lhD~HAEVLAR   81 (411)
                      ..|||+||++|+++|++|+++|||..+|||||||||++.+  .++++||||||||||++++.++.+|.+|||||||||||
T Consensus        23 ~~~ad~Ia~~v~~~f~~L~~~~kp~~~~~tvLA~iV~~~~~~~~~~~vVslgTGtKc~~~~~~~~~G~vlhD~HAEVlAR  102 (403)
T 1zy7_A           23 QVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISR  102 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTTSGGGCCSCEEEEEEEESSCGGGCEEEEEEECCCBCCGGGCCTTSCSCSBCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEEEEEccCCCCceEEEEEcCCCCccCcccccCCCCeeeeCCHHHHHH
Confidence            3689999999999999999999999999999999999975  34799999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCcccccCCCCCeeeeeCCCCceEeeCCcEEEEEeccCCCCccccccCcCCCCCccccCCC
Q 015229           82 RALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQLPCGDASLSSCHSAPRNFFSREGN  161 (411)
Q Consensus        82 R~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~Lk~~v~~hLYiS~~PCGDAsi~~~~~~~~~~~~~~~~  161 (411)
                      |||+||||+||+.+....       ++. ..+||+..++|+|+||+||+||||||++|||||||+.+.+.....   .++
T Consensus       103 Raf~r~L~~ql~~~~~~~-------~~~-~~sif~~~~~~~~~Lk~~v~lhlY~S~~PCGdAsi~~p~~~~~~~---~~~  171 (403)
T 1zy7_A          103 RSLLRFLYTQLELYLNNK-------DDQ-KRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILEE---PAD  171 (403)
T ss_dssp             HHHHHHHHHHHHHHHHCH-------HHH-HHCSEEECTTSSEEECTTEEEEEEESSCCTTHHHHC---------------
T ss_pred             HHHHHHHHHHHHHHhccc-------cCC-CCceEEECCCCCeEECCCcEEEEEeccCCCCCcccCCcccccccc---ccc
Confidence            999999999998875210       011 245788888889999999999999999999999998654321110   001


Q ss_pred             CCCCccccCCcccceee-c--cCCCCCCCccccceeecCCC--CCCccceechhhHHHHHHHhhhhhhHhhhccccceec
Q 015229          162 SLSSVDELNGFKDGICE-A--SNLNNDDSLQHIGRVQRKPG--RGDTTLSVSCSDKIARWNAVGVQGALLSYFLQPVYLS  236 (411)
Q Consensus       162 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~g~vRtKPG--Rgd~t~SmSCSDKLarWnvlGlQGaLLS~~iePIYl~  236 (411)
                      ..+. ....+..++.+. +  ..+...     .+.++|+||  ||++|+||||||||||||||||||||||||+|||||+
T Consensus       172 ~~~~-~~~~g~lr~k~~~g~g~~p~~~-----~~~~~~~~gvl~g~~t~smSCSDKlarWnvlGlQGaLLs~fi~PiYls  245 (403)
T 1zy7_A          172 RHPN-RKARGQLRTKIESGEGTIPVRS-----NASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLLSIFVEPIYFS  245 (403)
T ss_dssp             ------CCTTCCEEEETTCSSCEECCS-----SCCCCCHHHHHTTCCCEEECHHHHHHHHHHHCSSHHHHHTTBCCCCEE
T ss_pred             cCcc-hhhccccceeeccCCCCCCCCC-----cccccccccccccCcceeechHHHHHHHHHhccchHHHhhhcccceeE
Confidence            1110 011111111111 0  001111     134678888  8999999999999999999999999999999999999


Q ss_pred             eEEeCCCCCCCCCcchHHHHhhhhhcccccccccCCCCceeccceEEecCCCCcccccCccccCccCCcccEEeeCC-Cc
Q 015229          237 SITVGRSPNTSEDFPLEEHLKRSLYDRILPLSEELSSPFQVNKPIFLAASVPPEEFQHSETASSTLTCGYSICWNKS-GL  315 (411)
Q Consensus       237 sivvg~~~~~~~~~~~~~~l~RAl~~R~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~si~W~~~-~~  315 (411)
                      +||||.+++       .++|+|||++|+..+ ..+|.||++++|++...+..  +.+     .+..++++||+|+.+ ..
T Consensus       246 siv~g~~~~-------~~~l~RA~~~R~~~~-~~lp~~~~~~~p~~~~~~~~--~~r-----~~~~~~~~Si~W~~~~~~  310 (403)
T 1zy7_A          246 SIILGSLYH-------GDHLSRAMYQRISNI-EDLPPLYTLNKPLLSGISNA--EAR-----QPGKAPNFSVNWTVGDSA  310 (403)
T ss_dssp             EEEESSCCC-------HHHHHHHHTGGGTTC-CCCCTTCCCCCCEEEECSSC--CCC-----CCSCCCSEEEEEETTCSS
T ss_pred             EEEeCCcCC-------HHHHHHHHHHhhhhh-ccCCCcceecccccccCCcc--ccc-----cCCCCCCeeEEEEcCCCc
Confidence            999998753       478999999999875 45789999999998764332  221     122456789999975 45


Q ss_pred             ceeeeCCCCcccCcCCCCCCCCCCccHHHHHHHHHHHHHhhhhhhhc----ccCCCCcHHHHHhchHHHHHHHHHhhc--
Q 015229          316 HEVILGTTGRKQGTSAKGALSPSTQSSLCKNRLLQVFLSLKHESKIR----CLAADISYRELKDGAQAYNIASKVFKG--  389 (411)
Q Consensus       316 ~Evi~~~~G~k~G~~~K~~~~~~~~SrlcK~~l~~~f~~l~~~~~~~----~~~~~~tY~e~K~~a~~Yq~ak~~l~~--  389 (411)
                      .|||+|.+|++.         ++++|+|||++||++|.+|...+...    ......||.|+|.++.+||++|++|+.  
T Consensus       311 ~Evi~g~tGk~~---------~~~~SrlcK~~l~~~f~~l~~~l~~~~~~~~~~~~~tY~e~K~~a~~Yq~ak~~l~~~~  381 (403)
T 1zy7_A          311 IEVINATTGKDE---------LGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAAKEYQAAKARLFTAF  381 (403)
T ss_dssp             CEEEETTTTEET---------TSCCCTTSHHHHHHHHHHHHTTSCGGGCSSCCSSCCSHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             eEEEECCCCCCC---------cCCcCHHHHHHHHHHHHHHHHHhccccccccCCCccCHHHHHHhhHHHHHHHHHHHHHH
Confidence            999999998732         24589999999999999998875432    134678999999999999999998753  


Q ss_pred             -CCCCCCCCcCCCCCCCcccc
Q 015229          390 -GPPFNNWPLKPLGYEVFFQG  409 (411)
Q Consensus       390 -~~~~g~W~~kp~~~~~F~~~  409 (411)
                       +.+||+|++||+++|+|++.
T Consensus       382 ~~~~lg~W~~Kp~e~d~F~l~  402 (403)
T 1zy7_A          382 IKAGLGAWVEKPTEQDQFSLT  402 (403)
T ss_dssp             HHTTSCCCCCCCGGGGCCCCC
T ss_pred             HhccCCCCCcCCcccCceEec
Confidence             35899999999999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00