Citrus Sinensis ID: 015235


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-
MIGSKAAQPNQAQTTLCSLRSSLLTLALVTLLCFTCLSFNSFRSYPLQNNFNSTLSFAINKQDYSDLGSDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVLQPFALPRGGRDVENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIKYF
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHcccEEEEEcccccccccccccccccccHHHHHHHHHHHHcccccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcccccccHHHHHHHHHHHccccccccccccccccccEEEEEEccccEEEEcccccccccccHHHHHcccEEEEEEEcccccccccccccccEEEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHcEEccccccccHHHHHHHHHHHHHcccccc
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccccccccccccccccccccHHHHHHcHHHHHHccEEEEEccccccccccccccccccEHHHHHHHHHHHcccEEEccccccEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHccccccccccccEEEEEcccccHHHHcccHHHHHHHEEEEccccccccccccccEccccccccccccccccccccccEEEEEEccccccHHHHHHHHHcccccccEcccccccccccccHHHHHHccEEEEcccccccccHHHHHHHHHccccEEEEccccccHHHcccHHHcEEEEcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccEEcc
migskaaqpnqaQTTLCSLRSSLLTLALVTLLCFTclsfnsfrsyplqnnfnsTLSFAInkqdysdlgsdvfhspsvfhlnYLEMVTNfkiyiypdgdpntfyqtprkltgkyasegyffqniresrflthdpdrahlffipischkmrgkgtsyeNMTVIVKDYVDSLInkypywnrtlgadhffvtchdvgvrategvpfliKNAIrvvcspsydvafiphkdvalpqvlqpfalprggrdvenrtVLGFWAGHRNSKIRVILARVWendteldisnnrinraigplvyqrrfyktkfcicpggsqvnsariadsihyGCVPVIlsnyydlpfndilDWRKFAVILNERDVYQLKQILKNISDAEFVSLHNNLVKVQKHfqwnsppvrfdaFHMVMYELWLRRHVIKYF
migskaaqpnqaQTTLCSLRSSLLTLALVTLLCFTCLSFNSFRSYPLQNNFNSTLSFAINKQDYSDLGSDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVLQPfalprggrdVENRTVLgfwaghrnskiRVILARVWENdteldisnnrinraigplVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIKYF
MIGSKAAQPNQAQttlcslrsslltlalvtllcftclSFNSFRSYPLQNNFNSTLSFAINKQDYSDLGSDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVLQPFALPRGGRDVENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIKYF
**************TLCSLRSSLLTLALVTLLCFTCLSFNSFRSYPLQNNFNSTLSFAINKQDYSDLGSDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVLQPFALPRGGRDVENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIKY*
*****************SLRSSLLTLALVTLLCFTCLSFNS***************************SDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVLQPFALPRGGRDVENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIK**
**************TLCSLRSSLLTLALVTLLCFTCLSFNSFRSYPLQNNFNSTLSFAINKQDYSDLGSDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVLQPFALPRGGRDVENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIKYF
**************TLCSLRSSLLTLALVTLLCFTCLSFNSFRSYPLQ**************DYSDLGSDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVLQPFALPRGGRDVENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIKYF
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIGSKAAQPNQAQTTLCSLRSSLLTLALVTLLCFTCLSFNSFRSYPLQNNFNSTLSFAINKQDYSDLGSDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVLQPFALPRGGRDVENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIKYF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query411 2.2.26 [Sep-21-2011]
Q9FFN2518 Probable glycosyltransfer no no 0.795 0.631 0.390 2e-68
Q9SSE8470 Probable glycosyltransfer no no 0.863 0.755 0.369 3e-64
Q9LFP3480 Probable glycosyltransfer no no 0.827 0.708 0.356 2e-60
Q3E9A4466 Probable glycosyltransfer no no 0.824 0.727 0.344 3e-59
Q3E7Q9480 Probable glycosyltransfer no no 0.817 0.7 0.353 1e-58
Q94AA9500 Xylogalacturonan beta-1,3 no no 0.798 0.656 0.328 5e-58
Q3EAR7470 Probable glycosyltransfer no no 0.785 0.687 0.330 1e-52
Q6NMM8469 Probable glucuronoxylan g no no 0.888 0.778 0.254 8e-27
Q10SX7427 Probable glucuronosyltran no no 0.644 0.620 0.298 2e-25
Q9FZJ1412 Probable beta-1,4-xylosyl no no 0.729 0.728 0.282 1e-24
>sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2 Back     alignment and function desciption
 Score =  259 bits (663), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 215/343 (62%), Gaps = 16/343 (4%)

Query: 77  VFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIR-ESRFLTHDPDR 135
           VFH +YLEM   FKIY+Y +G+P  F+  P K    Y+ EG F   I  ++RF T++PD+
Sbjct: 178 VFHRSYLEMEKQFKIYVYKEGEPPLFHDGPCK--SIYSMEGSFIYEIETDTRFRTNNPDK 235

Query: 136 AHLFFIPISCHKM-----RGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCH 190
           AH+F++P S  KM           +  +   VKDY++ + +KYPYWNR++GADHF ++CH
Sbjct: 236 AHVFYLPFSVVKMVRYVYERNSRDFSPIRNTVKDYINLVGDKYPYWNRSIGADHFILSCH 295

Query: 191 DVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQV-LQPFALPR--GGRDVENR 247
           D G  A+   P L  N+IR +C+ +    F P KDV++P++ L+  +L    GG    +R
Sbjct: 296 DWGPEASFSHPHLGHNSIRALCNANTSERFKPRKDVSIPEINLRTGSLTGLVGGPSPSSR 355

Query: 248 TVLGFWAGHRNSKIRVILARVWEN-DTELDISNNRINRAIGPLVYQRRFYKTKFCICPGG 306
            +L F+AG  +  +R +L + WEN D ++ + +  + R      Y      +KFCICP G
Sbjct: 356 PILAFFAGGVHGPVRPVLLQHWENKDNDIRV-HKYLPRGTS---YSDMMRNSKFCICPSG 411

Query: 307 SQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDA 366
            +V S RI ++++ GCVPV++++ Y  PF+D+L+WR F+VI++  D+  LK IL +IS  
Sbjct: 412 YEVASPRIVEALYSGCVPVLINSGYVPPFSDVLNWRSFSVIVSVEDIPNLKTILTSISPR 471

Query: 367 EFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIK 409
           +++ ++  ++KV++HF+ NSP  RFD FHM+++ +W+RR  +K
Sbjct: 472 QYLRMYRRVLKVRRHFEVNSPAKRFDVFHMILHSIWVRRLNVK 514




May be involved in cell wall biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1 Back     alignment and function description
>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2 Back     alignment and function description
>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3 Back     alignment and function description
>sp|Q3E7Q9|GLYT6_ARATH Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana GN=At5g25310 PE=3 SV=2 Back     alignment and function description
>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2 Back     alignment and function description
>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2 Back     alignment and function description
>sp|Q6NMM8|F8H_ARATH Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana GN=F8H PE=2 SV=1 Back     alignment and function description
>sp|Q10SX7|GT31_ORYSJ Probable glucuronosyltransferase Os03g0107900 OS=Oryza sativa subsp. japonica GN=Os03g0107900 PE=2 SV=1 Back     alignment and function description
>sp|Q9FZJ1|IRX10_ARATH Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query411
359495862 594 PREDICTED: probable glycosyltransferase 0.992 0.686 0.775 0.0
255563758406 catalytic, putative [Ricinus communis] g 0.987 1.0 0.768 0.0
296090519416 unnamed protein product [Vitis vinifera] 0.992 0.980 0.775 0.0
449431924412 PREDICTED: probable glycosyltransferase 0.958 0.956 0.810 0.0
356496874404 PREDICTED: probable glycosyltransferase 0.948 0.965 0.786 0.0
224084457406 predicted protein [Populus trichocarpa] 0.961 0.972 0.783 0.0
15233650425 Exostosin family protein [Arabidopsis th 0.961 0.929 0.756 0.0
297802132428 exostosin family protein [Arabidopsis ly 0.961 0.922 0.763 0.0
357485421415 Exostosin-like protein [Medicago truncat 0.985 0.975 0.779 0.0
363808264409 uncharacterized protein LOC100777368 [Gl 0.829 0.833 0.862 0.0
>gi|359495862|ref|XP_002266299.2| PREDICTED: probable glycosyltransferase At5g03795 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/418 (77%), Positives = 360/418 (86%), Gaps = 10/418 (2%)

Query: 1   MIGSKAAQPNQAQTTLCSLRSSLLTLALVTLLCFTCLSFNSFRSYPLQNNFNST------ 54
           M   K+ Q   A +TLCS+  SLLTLA +TL+ FT +S  S  S     +FNS+      
Sbjct: 179 MTAVKSPQQAVASSTLCSIHGSLLTLATLTLISFTYISLKSLHSPFHDPSFNSSPPPQVI 238

Query: 55  --LSFAINKQDYSDLGSDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGK 112
             +   + ++D     SD++HSP +F LNY EM  NFK+YIYPDGDPNTFYQTPRKLTGK
Sbjct: 239 SRVEHLVEEED--SPFSDIYHSPEIFRLNYREMEKNFKVYIYPDGDPNTFYQTPRKLTGK 296

Query: 113 YASEGYFFQNIRESRFLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINK 172
           YASEGYFFQNIR+SRF T+DPD+AHLFFIPISCHKMRGKGTSYENMTVIV++YV SLI+K
Sbjct: 297 YASEGYFFQNIRDSRFRTNDPDQAHLFFIPISCHKMRGKGTSYENMTVIVQNYVGSLISK 356

Query: 173 YPYWNRTLGADHFFVTCHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVL 232
           YPYWNRTLGADHFFVTCHDVGVRATEGVPFL+KN+IRVVCSPSYDV FIPHKDVALPQVL
Sbjct: 357 YPYWNRTLGADHFFVTCHDVGVRATEGVPFLVKNSIRVVCSPSYDVGFIPHKDVALPQVL 416

Query: 233 QPFALPRGGRDVENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIGPLVYQ 292
           QPFALP GG D+ENRT LGFWAGHRNSKIRVILARVWENDTELDI NNRINRA G L+YQ
Sbjct: 417 QPFALPAGGNDIENRTTLGFWAGHRNSKIRVILARVWENDTELDIMNNRINRAAGELLYQ 476

Query: 293 RRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERD 352
           +RFY+TKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKF+V+L E D
Sbjct: 477 KRFYRTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFSVVLKELD 536

Query: 353 VYQLKQILKNISDAEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIKY 410
           VYQLKQILK+I DAEFV+LHNNLV+VQKHFQWNSPP+R+DAFHM+MYELWLR  VIKY
Sbjct: 537 VYQLKQILKDIPDAEFVALHNNLVQVQKHFQWNSPPIRYDAFHMIMYELWLRHQVIKY 594




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563758|ref|XP_002522880.1| catalytic, putative [Ricinus communis] gi|223537865|gb|EEF39480.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296090519|emb|CBI40850.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449431924|ref|XP_004133750.1| PREDICTED: probable glycosyltransferase At5g03795-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356496874|ref|XP_003517290.1| PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] Back     alignment and taxonomy information
>gi|224084457|ref|XP_002307304.1| predicted protein [Populus trichocarpa] gi|222856753|gb|EEE94300.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15233650|ref|NP_195517.1| Exostosin family protein [Arabidopsis thaliana] gi|4467110|emb|CAB37544.1| putative protein [Arabidopsis thaliana] gi|7270787|emb|CAB80469.1| putative protein [Arabidopsis thaliana] gi|15293111|gb|AAK93666.1| unknown protein [Arabidopsis thaliana] gi|21280961|gb|AAM45007.1| unknown protein [Arabidopsis thaliana] gi|332661466|gb|AEE86866.1| Exostosin family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297802132|ref|XP_002868950.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi|297314786|gb|EFH45209.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357485421|ref|XP_003612998.1| Exostosin-like protein [Medicago truncatula] gi|355514333|gb|AES95956.1| Exostosin-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|363808264|ref|NP_001242494.1| uncharacterized protein LOC100777368 [Glycine max] gi|255635742|gb|ACU18220.1| unknown [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query411
TAIR|locus:2120933425 AT4G38040 "AT4G38040" [Arabido 0.832 0.804 0.862 1.8e-167
TAIR|locus:1009023450518 AT5G03795 [Arabidopsis thalian 0.836 0.664 0.382 1.3e-68
TAIR|locus:2091122470 AT3G07620 "AT3G07620" [Arabido 0.861 0.753 0.379 1.4e-64
TAIR|locus:2144231546 AT5G11610 "AT5G11610" [Arabido 0.827 0.622 0.380 6e-64
TAIR|locus:2125687593 AT4G32790 "AT4G32790" [Arabido 0.812 0.563 0.36 4e-58
TAIR|locus:2145472480 AT5G25310 "AT5G25310" [Arabido 0.824 0.706 0.356 8.4e-58
TAIR|locus:2145254654 AT5G25820 "AT5G25820" [Arabido 0.805 0.506 0.360 3.3e-56
TAIR|locus:2145924500 XGD1 "AT5G33290" [Arabidopsis 0.824 0.678 0.329 1.6e-54
TAIR|locus:2100814470 AT3G42180 "AT3G42180" [Arabido 0.800 0.7 0.324 3.5e-52
TAIR|locus:2152632547 AT5G37000 "AT5G37000" [Arabido 0.737 0.553 0.339 2.6e-47
TAIR|locus:2120933 AT4G38040 "AT4G38040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1629 (578.5 bits), Expect = 1.8e-167, P = 1.8e-167
 Identities = 295/342 (86%), Positives = 312/342 (91%)

Query:    69 SDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESRF 128
             SDV+HSP  F LNY EM   FK+YIYPDGDPNTFYQTPRK+TGKYASEGYFFQNIRESRF
Sbjct:    84 SDVYHSPEAFRLNYAEMEKRFKVYIYPDGDPNTFYQTPRKVTGKYASEGYFFQNIRESRF 143

Query:   129 LTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVT 188
              T DPD A LFFIPISCHKMRGKGTSYENMTVIV++YVD LI KYPYWNRTLGADHFFVT
Sbjct:   144 RTLDPDEADLFFIPISCHKMRGKGTSYENMTVIVQNYVDGLIAKYPYWNRTLGADHFFVT 203

Query:   189 CHDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVALPQVLQPFALPRGGRDVENRT 248
             CHDVGVRA EG P LIKN IRVVCSPSY+V FIPHKDVALPQVLQPFALP GG DVENRT
Sbjct:   204 CHDVGVRAFEGSPLLIKNTIRVVCSPSYNVGFIPHKDVALPQVLQPFALPAGGNDVENRT 263

Query:   249 VLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQ 308
              LGFWAGHRNSKIRVILA VWENDTELDISNNRINRA G LVYQ+RFY+TKFCICPGGSQ
Sbjct:   264 TLGFWAGHRNSKIRVILAHVWENDTELDISNNRINRATGHLVYQKRFYRTKFCICPGGSQ 323

Query:   309 VNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEF 368
             VNSARI DSIHYGC+PVILS+YYDLPFNDIL+WRKFAV+L E+DVY LKQILKNI  +EF
Sbjct:   324 VNSARITDSIHYGCIPVILSDYYDLPFNDILNWRKFAVVLREQDVYNLKQILKNIPHSEF 383

Query:   369 VSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYELWLRRHVIKY 410
             VSLHNNLVKVQKHFQWNSPPV+FDAFHM+MYELWLR HV+KY
Sbjct:   384 VSLHNNLVKVQKHFQWNSPPVKFDAFHMIMYELWLRHHVVKY 425




GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA;ISS
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:1009023450 AT5G03795 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091122 AT3G07620 "AT3G07620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144231 AT5G11610 "AT5G11610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125687 AT4G32790 "AT4G32790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145472 AT5G25310 "AT5G25310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145254 AT5G25820 "AT5G25820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100814 AT3G42180 "AT3G42180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152632 AT5G37000 "AT5G37000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query411
pfam03016292 pfam03016, Exostosin, Exostosin family 3e-57
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information
 Score =  189 bits (481), Expect = 3e-57
 Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 25/294 (8%)

Query: 89  FKIYIYP-----DGDPNTFYQTPRKLTGKYASEGYFFQNIRESRFLTHDPDRAHLFFIPI 143
            K+Y+Y      +   +   +T   LT +YA+E    ++I  SR  T DPD A LFF+P 
Sbjct: 5   LKVYVYDLPRRFNLLEDVLPETSWYLTHQYAAESILHKSILNSRCRTLDPDEADLFFVPF 64

Query: 144 S-CHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVRATEGVPF 202
                +       + +       +   +   PYWNR+ G DH  V  H  G  A + +P 
Sbjct: 65  YTSLSVGTNAVERDLL----PSELVEWLESLPYWNRSGGRDHIIVNSHPFGGSAFDRLPA 120

Query: 203 LIKNAIRVVCSPSYDVA--FIPHKDVALPQVLQPFALPRGGRD---VENRTVLGFWAGHR 257
           L  N I  V +        F P  DV LP    P ++     D      R  L F+AG  
Sbjct: 121 LNNNTILAVLAGGGFSEDQFRPGFDVPLPAYFHPNSVDDLESDGMPPSKRKTLLFFAGGP 180

Query: 258 N--------SKIRVILARVWENDTELDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQV 309
                    + IR +L    +N  +     N       P  Y      ++FC+ P G   
Sbjct: 181 RPAGKGALANAIRDLLIEECKNSPDFQCEGN--QSCGNPENYMELLRSSRFCLVPPGDTP 238

Query: 310 NSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI 363
            S R+ D++  GC+PVI+S+ ++LPF D++DW KF+V + E D+  L +IL+ I
Sbjct: 239 TSPRLFDALRAGCIPVIISDGWELPFEDVIDWSKFSVRVPENDIPSLPEILRAI 292


The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 411
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.94
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.88
cd03814364 GT1_like_2 This family is most closely related to 96.69
cd03801374 GT1_YqgM_like This family is most closely related 96.63
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 96.54
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 96.5
cd03822366 GT1_ecORF704_like This family is most closely rela 96.44
cd03820348 GT1_amsD_like This family is most closely related 96.21
cd03794394 GT1_wbuB_like This family is most closely related 95.95
cd03819355 GT1_WavL_like This family is most closely related 95.79
cd03809365 GT1_mtfB_like This family is most closely related 95.74
cd04962371 GT1_like_5 This family is most closely related to 95.64
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 95.56
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 95.55
cd03808359 GT1_cap1E_like This family is most closely related 95.52
cd03800398 GT1_Sucrose_synthase This family is most closely r 95.35
cd03821375 GT1_Bme6_like This family is most closely related 95.34
cd03818396 GT1_ExpC_like This family is most closely related 95.18
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 95.14
cd03798377 GT1_wlbH_like This family is most closely related 95.07
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 95.06
cd03823359 GT1_ExpE7_like This family is most closely related 95.02
cd03807365 GT1_WbnK_like This family is most closely related 94.89
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 94.75
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 94.73
cd03817374 GT1_UGDG_like This family is most closely related 94.38
cd04951360 GT1_WbdM_like This family is most closely related 94.12
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 93.97
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 93.94
cd03805392 GT1_ALG2_like This family is most closely related 93.8
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 93.48
cd03806419 GT1_ALG11_like This family is most closely related 93.41
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 93.28
cd03804351 GT1_wbaZ_like This family is most closely related 93.25
cd04949372 GT1_gtfA_like This family is most closely related 93.17
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 92.4
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 92.19
PRK10307412 putative glycosyl transferase; Provisional 92.19
cd03802335 GT1_AviGT4_like This family is most closely relate 92.0
cd04955363 GT1_like_6 This family is most closely related to 91.47
cd03825365 GT1_wcfI_like This family is most closely related 91.2
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 91.18
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 90.96
cd03811353 GT1_WabH_like This family is most closely related 90.73
PRK00654466 glgA glycogen synthase; Provisional 90.72
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 90.5
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 90.27
PRK14098489 glycogen synthase; Provisional 89.88
PHA01633335 putative glycosyl transferase group 1 89.73
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 89.61
PLN02949463 transferase, transferring glycosyl groups 89.48
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 89.07
cd03813475 GT1_like_3 This family is most closely related to 88.41
PRK14099485 glycogen synthase; Provisional 88.34
PHA01630331 putative group 1 glycosyl transferase 88.26
cd04946407 GT1_AmsK_like This family is most closely related 88.23
cd03795357 GT1_like_4 This family is most closely related to 87.53
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 85.95
cd03816415 GT1_ALG1_like This family is most closely related 85.46
cd03796398 GT1_PIG-A_like This family is most closely related 84.16
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 84.12
PLN02939977 transferase, transferring glycosyl groups 82.39
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
Probab=100.00  E-value=6.2e-63  Score=513.20  Aligned_cols=345  Identities=37%  Similarity=0.676  Sum_probs=284.1

Q ss_pred             CCCCceeeecChhhhhhhH--------------------HHhhCCCeeeEecCCCCCccccCCccccCCchhHHHHHHHH
Q 015235           64 YSDLGSDVFHSPSVFHLNY--------------------LEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNI  123 (411)
Q Consensus        64 ~~~~~~~vY~~p~~f~~~y--------------------~~~~~~~kVYVY~~g~~~~~~~~~~~~t~~y~~E~~f~~~L  123 (411)
                      |.+.++|+|++|+.|+.+.                    ..|+..+|+|+|.+|+.+.++..+++.++||++|++||++|
T Consensus        70 ~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~  149 (464)
T KOG1021|consen   70 CAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRM  149 (464)
T ss_pred             ccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHH
Confidence            6678999999999998743                    34456689999999966655555667899999999999999


Q ss_pred             h--hCCCcCCCcCCccEEEEecccccccCCC------CCchhhhHHHHHHHHHHHhcCccccccCCCCeEEEeecCCCcc
Q 015235          124 R--ESRFLTHDPDRAHLFFIPISCHKMRGKG------TSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFVTCHDVGVR  195 (411)
Q Consensus       124 ~--~S~~~T~dP~eA~lFyvP~~~~~~~~~~------~~~~n~~~~~~~~v~~ll~~~PyWnR~~G~DHf~v~~~D~g~~  195 (411)
                      +  .++|||.||+|||+|||||+..+.....      ....+....+++++..+++++|||||++|+|||||++|||+..
T Consensus       150 ~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~  229 (464)
T KOG1021|consen  150 LRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDF  229 (464)
T ss_pred             hcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchhe
Confidence            5  7899999999999999999987654211      1223556788999998899999999999999999999999976


Q ss_pred             cCCCchhhhcceEEEeec-CCCCCccccC-CCCCCCccccCCcC-CC-----CCCCCCccceeeeeccC-CChHHHHHHH
Q 015235          196 ATEGVPFLIKNAIRVVCS-PSYDVAFIPH-KDVALPQVLQPFAL-PR-----GGRDVENRTVLGFWAGH-RNSKIRVILA  266 (411)
Q Consensus       196 ~~~~~p~~~~nai~~~~~-~~~~~~frp~-kDV~iP~~~~~~~~-p~-----~~~~~~~R~~L~fFaG~-~~~~vR~~L~  266 (411)
                      ..........+.|..+++ +....++.+. +||+||++..+... +.     ++....+|++|+||+|+ .+|.+|+.|.
T Consensus       230 ~~~~~~~~~~~~i~~~~n~a~ls~~~~~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~~~R~~L~~F~G~~~~~~iR~~L~  309 (464)
T KOG1021|consen  230 RRRSDWGASISLIPEFCNGALLSLEFFPWNKDVAIPYPTIPHPLSPPENSWQGGVPFSNRPILAFFAGAPAGGQIRSILL  309 (464)
T ss_pred             eeccchhhHHHHHHhhCCcceeecccccCCCcccCCCccCcCccCccccccccCCCCCCCceEEEEeccccCCcHHHHHH
Confidence            542222223344444554 3455678888 99999997533221 11     23345799999999999 8999999999


Q ss_pred             HHhhcCCc----ccccccccccCCCchhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCC
Q 015235          267 RVWENDTE----LDISNNRINRAIGPLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWR  342 (411)
Q Consensus       267 ~~~~~~~~----~~i~~~~~~~~~~~~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~  342 (411)
                      ++|+++++    +.+..+.. .|.+...|.+.|++|+|||||+|++++|+|+||||.+|||||||+|++.+||++++||+
T Consensus       310 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~  388 (464)
T KOG1021|consen  310 DLWKKDPDTEVFVNCPRGKV-SCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWT  388 (464)
T ss_pred             HHhhcCcCccccccCCCCcc-ccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccce
Confidence            99998332    22222211 25677899999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEEEcccCHHHH-HHHHhcCCHHHHHHHHHHHHH-hhccceecC--CCCCcCHHHHHHHHHHHHhhhcc
Q 015235          343 KFAVILNERDVYQL-KQILKNISDAEFVSLHNNLVK-VQKHFQWNS--PPVRFDAFHMVMYELWLRRHVIK  409 (411)
Q Consensus       343 ~fsV~v~e~~~~~l-~~~L~~i~~~~~~~mq~~l~~-~~~~f~y~~--~~~~~DAf~~il~~l~~Rr~~~~  409 (411)
                      +|||+|++++++++ +++|.+++.+++.+||+++.+ +.+||+++.  ++..+|||||+++++|.|+++.+
T Consensus       389 ~fSV~v~~~~v~~~~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~  459 (464)
T KOG1021|consen  389 EFSVFVPEKDVPELIKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLR  459 (464)
T ss_pred             EEEEEEEHHHhhhHHHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhcccccc
Confidence            99999999999998 999999999999999999994 999999998  78889999999999999999876



>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query411
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 57.2 bits (137), Expect = 6e-09
 Identities = 59/440 (13%), Positives = 131/440 (29%), Gaps = 134/440 (30%)

Query: 10  NQAQTTLCSLRSSLLTLALVTLLCF--TCLSFNSFRSYPLQNNFNSTLSFAINKQDYSDL 67
            + +  L  LR +   + +  +L    T ++ +   SY +Q   +    F I    + +L
Sbjct: 138 LKLRQALLELRPAKN-VLIDGVLGSGKTWVALDVCLSYKVQCKMD----FKIF---WLNL 189

Query: 68  GSDVFHSPSVFHLNYLEMVTNFKIYIYPDGDPNTFYQTPRKLTGKYASEGYFFQNIRESR 127
            +   +SP       LEM+      I P+    + + +  KL                 R
Sbjct: 190 KNC--NSPETV----LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-------ELRR 236

Query: 128 FLTHDPDRAHLFFIPISCHKMRGKGTSYENMTVIVKDYVDSLINKYPYWNRTLGADHFFV 187
            L   P                     YEN  +++ + V          N     + F +
Sbjct: 237 LLKSKP---------------------YENCLLVLLN-V---------QNAKA-WNAFNL 264

Query: 188 TC------HDVGVRATEGVPFLIKNAIRVVCSPSYDVAFIPHKDVAL-PQVL--QPFALP 238
           +C          V       FL       +    + +   P +  +L  + L  +P  LP
Sbjct: 265 SCKILLTTRFKQV-----TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 239 RGGRDVENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINRAIG-------PLVY 291
           R       R +       R+          W+N     ++ +++   I        P  Y
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLAT------WDN--WKHVNCDKLTTIIESSLNVLEPAEY 371

Query: 292 QRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNE- 350
           ++ F   +  + P  + + +  +           ++  ++D+  +D++       ++N+ 
Sbjct: 372 RKMFD--RLSVFPPSAHIPTILL----------SLI--WFDVIKSDVMV------VVNKL 411

Query: 351 -------RD-------VYQLKQILKNISDAEFVSLHNNLV----KVQKHFQWNSPPVRFD 392
                  +        +  +  +   +      +LH ++V      +     +  P   D
Sbjct: 412 HKYSLVEKQPKESTISIPSI-YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD 470

Query: 393 -------AFHMV---MYELW 402
                    H+      E  
Sbjct: 471 QYFYSHIGHHLKNIEHPERM 490


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query411
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 97.54
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 96.46
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 95.89
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 95.88
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 95.79
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 95.77
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 95.57
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 95.54
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 94.78
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 94.63
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 94.6
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 94.18
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 93.41
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 93.3
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 92.86
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 92.42
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 92.22
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 92.18
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 89.02
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 87.4
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 85.54
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 85.09
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 83.39
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 81.03
1uqt_A482 Alpha, alpha-trehalose-phosphate synthase; glycosy 80.97
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=97.54  E-value=0.00025  Score=61.01  Aligned_cols=96  Identities=10%  Similarity=0.110  Sum_probs=67.8

Q ss_pred             chhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CH
Q 015235          288 PLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SD  365 (411)
Q Consensus       288 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~  365 (411)
                      ..+..+.++.+..++.|.-.......++|||.+||||||..+.. -...++++-...  .++..+..++.+.+..+  .+
T Consensus        65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~  141 (166)
T 3qhp_A           65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPL-SATRQFALDERS--LFEPNNAKDLSAKIDWWLENK  141 (166)
T ss_dssp             HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTT-CGGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCC-CchhhhccCCce--EEcCCCHHHHHHHHHHHHhCH
Confidence            45678899999999999876677889999999999999994321 112233333333  56777777766666554  67


Q ss_pred             HHHHHHHHHHHHhhccceecC
Q 015235          366 AEFVSLHNNLVKVQKHFQWNS  386 (411)
Q Consensus       366 ~~~~~mq~~l~~~~~~f~y~~  386 (411)
                      +...+|.++.++..++|.|..
T Consensus       142 ~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A          142 LERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             HHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHCChhh
Confidence            788899998888778888764



>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query411
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 97.23
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 95.68
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 94.65
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 94.46
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 90.38
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 86.25
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 85.38
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]
Probab=97.23  E-value=0.00057  Score=65.55  Aligned_cols=120  Identities=14%  Similarity=0.208  Sum_probs=76.7

Q ss_pred             ccceeeeeccCCChHHHHHHHHHhhcCCccccccccccc-CCCchhHHhhccCceEEeecC---CCCCCchhHHHHHhhC
Q 015235          246 NRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINR-AIGPLVYQRRFYKTKFCICPG---GSQVNSARIADSIHYG  321 (411)
Q Consensus       246 ~R~~L~fFaG~~~~~vR~~L~~~~~~~~~~~i~~~~~~~-~~~~~~y~~~~~~S~FCL~p~---G~~~~s~rl~dai~~G  321 (411)
                      +.+.-++++++.++..|..+.+....-..++..+.-.+. +....+-.+.+++.+|+||..   ..+..+-.++||+.+|
T Consensus       179 K~kFcs~v~Sn~~~~~R~~~~~~L~k~~~Vd~~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~~~g  258 (349)
T d2nzwa1         179 KRGFASFVASNPNAPIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSH  258 (349)
T ss_dssp             SSEEEEECCSCCCCHHHHHHHHHHTTTSCCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTT
T ss_pred             cCceEEEEEcCCCCchHHHHHHHHhccCeecccCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHHHHHhCC
Confidence            334445666666667899998888765555543321111 112234567889999999975   3345689999999999


Q ss_pred             ceeEEEeCc-e--ecCCCCCCCCCcEEEEEcccCHHHHHHHHhcCC--HHHHHHH
Q 015235          322 CVPVILSNY-Y--DLPFNDILDWRKFAVILNERDVYQLKQILKNIS--DAEFVSL  371 (411)
Q Consensus       322 CIPVii~d~-~--~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i~--~~~~~~m  371 (411)
                      ||||..++. +  .+|=...|+..+|      ..+.++.+.|..++  ++.+.+|
T Consensus       259 ~iPIy~G~~~i~~~f~~~sfI~~~df------~s~~el~~~i~~l~~n~~~Y~~~  307 (349)
T d2nzwa1         259 TIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLHTHKNAYLDM  307 (349)
T ss_dssp             CEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHHTCHHHHHHH
T ss_pred             eEEEEECCCcHHHcCCCccEEEhhhC------CCHHHHHHHHHHHhcCHHHHHHH
Confidence            999999973 2  2343333444333      35777888888774  4445554



>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure