Citrus Sinensis ID: 015277

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
Protein Sequence
MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALVSDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTDSS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccHHHHcccccccccEEEEccEEcccccccccccccHHHHHHHHHcccEEEEEEEEcccccccccccccccccccccEEEEEcHHHHHHHHHccccccccccccEEEEEcccccccccHHcccccccccccccccccEEEEEEccEEEEEcHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHEEEEEEccccccccccccccccccccHHHHHHHcccccccEEEccEEcccccccccccccHHHHHHHHHcccEEEEEEEEcccccccccccccHHHccccEEEEEEccccHHHHHHcccccccccEEEEEEEEEcccccccHHHccccccccHHHHccccEEEEEEEccEEEEccHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccEEcccccccccc
Coil and Loop (DISEMBL)
mpkvpsfspvlknltyitepvlnreaefggsdfggypplaqrnnsydiresmsvhcgfvkgkpgrgtgydldeedildmeqcHGIVVVSAIFgafddinqpsniseysrkTVCFVMFVDEETEAYLKAnsgldrtkkigIWRIVVihnppysdarrtgkipkllahrlfpnarfslwidgklelvvdpYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFyknegltpyseaklpitsdvpegcviirehvpisnlFVCLWFnevdrftsrdqisfSTVRDKLWAKTNWTVNMFLDCERRNFVVQkyhrdhilpnpppvpvdleppplslaveappppalvsdlpkkfplettgervvrvptrkvsprrgsrrsasrrhrktissdrdtdss
Flexible Loop (DISEMBL)
mpkvpsfspvlknLTYITEPVLNREAEfggsdfggypPLAQRNNSYDIRESMSVhcgfvkgkpgrgTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINqpsniseysrKTVCFVMFVDEETEAYLkansgldrtkkigiWRIVVihnppysdarrtGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANkaakkydnasIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFtsrdqisfstvrdklwaktNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALVSDLPkkfplettgervvrvptrkvsprrgsrrsasrrhrktissdrdtdss
Low Complexity Region (SEG)
MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHIlpnpppvpvdleppplslaveappppalvsDLPKKFPLETTGERVVRVPTRKVsprrgsrrsasrrhrKTISSDRDTDSS
Disordered region (IsUnstruct)
*********VLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHIL*******************************************************************************
Disordered Region (DISOPRED)
***********KNLTYI****************GGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYH************************************************************************************
Disordered Region (DISEMBL)
MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALVSDLPKKFPLETTGERVVRV********************************
Disordered Region (DISPRO)
*****SFSPVLKNLTYITEPV***************PPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHI******************AVEAPPPPA*V***************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALVSDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTDSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
255536807	587	conserved hypothetical protein [Ricinus	0.975	0.681	0.727	1e-167
224077102	591	predicted protein [Populus trichocarpa]	0.995	0.690	0.744	1e-164
224125520	591	predicted protein [Populus trichocarpa]	0.8	0.554	0.814	1e-163
17064856	581	Unknown protein [Arabidopsis thaliana] g	0.797	0.562	0.807	1e-160
15217874	581	uncharacterized protein [Arabidopsis tha	0.797	0.562	0.807	1e-160
297851266	578	hypothetical protein ARALYDRAFT_473032 [	0.797	0.565	0.804	1e-159
356555317	570	PREDICTED: uncharacterized protein LOC10	0.936	0.673	0.684	1e-157
449508920	583	PREDICTED: uncharacterized LOC101209711	0.8	0.562	0.784	1e-156
449457735	581	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.8	0.564	0.784	1e-156
356521368	553	PREDICTED: uncharacterized protein LOC10	0.958	0.710	0.672	1e-155

>gi|255536807|ref|XP_002509470.1| conserved hypothetical protein [Ricinus communis] gi|223549369|gb|EEF50857.1| conserved hypothetical protein [Ricinus communis]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 299/411 (72%), Positives = 338/411 (82%), Gaps = 11/411 (2%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           MPK PS+SPV+KNLTYI E  L+R+ EFGGSDFGGYP L QR+ SYDIR+SM+VHCGFV+
Sbjct: 187 MPKFPSYSPVVKNLTYIYEDPLSRDGEFGGSDFGGYPTLKQRSESYDIRDSMNVHCGFVR 246

Query: 61  G-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           G +PGR TG+D+DE D+  MEQCHG+VV SAIFGAFDDI QPSNIS YS++TVCF MFVD
Sbjct: 247 GQRPGRSTGFDMDETDLAAMEQCHGVVVASAIFGAFDDIQQPSNISMYSKQTVCFFMFVD 306

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           EETEAYLK N GLD ++ +G+WRIV++ N PY+D RR GK+PKLL+HRLFPN R+SLWID
Sbjct: 307 EETEAYLKKNGGLDSSRMVGVWRIVLVRNLPYADGRRNGKVPKLLSHRLFPNTRYSLWID 366

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLELVVDP+QILERHLWRKNA+FAISRHYKRFDV VEAEANKAA KYDNASIDFQI+FY
Sbjct: 367 GKLELVVDPHQILERHLWRKNASFAISRHYKRFDVFVEAEANKAAGKYDNASIDFQIDFY 426

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
           K EGLTPYSEAKLPITSDVPEGCVIIREHVPISNLF CLWFNEVDRFTSRDQISFSTVRD
Sbjct: 427 KKEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRD 486

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALV 359
           K+ AKTNWTVNMFLDCERRNFVVQKYHRD +L +  P P       +       PP ALV
Sbjct: 487 KVQAKTNWTVNMFLDCERRNFVVQKYHRD-VLEHMAPPPP------VYPPPPPTPPSALV 539

Query: 360 SDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTDSS 410
            + P K  LE + E+VV  P R+       R+S SRRHRK ++  RD DSS
Sbjct: 540 HEAPFKTALENSDEKVVNGPVRRARR---GRKSGSRRHRKVVAGGRDIDSS 587

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077102|ref|XP_002305132.1| predicted protein [Populus trichocarpa] gi|222848096|gb|EEE85643.1| predicted protein [Populus trichocarpa]

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 306/411 (74%), Positives = 344/411 (83%), Gaps = 3/411 (0%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           MPKVPSFSPV+KNLTYI E  L+ E +FGGSDFGGYP L  R++SYDIRESMSVHCGFV+
Sbjct: 183 MPKVPSFSPVIKNLTYIHEDPLSGERDFGGSDFGGYPTLKHRSDSYDIRESMSVHCGFVQ 242

Query: 61  GK-PGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           GK PG+ TG+D+DE D+  MEQCHG+VV SAIFGAFDDI QP NISEYS+ TVCF MFVD
Sbjct: 243 GKRPGQNTGFDMDEIDLEAMEQCHGVVVASAIFGAFDDIQQPHNISEYSKNTVCFFMFVD 302

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           EETEAYLK NSGLD ++KIG+WRIVV HN PY+D RR GK+PKLL+HR+FPNARFSLWID
Sbjct: 303 EETEAYLKNNSGLDDSRKIGLWRIVVAHNLPYTDGRRNGKVPKLLSHRMFPNARFSLWID 362

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLEL+VDPYQILERHLWRKNATFAISRHY+RFDV +EAEANKAA KY+NASIDFQ+EFY
Sbjct: 363 GKLELLVDPYQILERHLWRKNATFAISRHYRRFDVFMEAEANKAAGKYENASIDFQVEFY 422

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
           K EGL PYSEAKLPITSDVPEGCV+IREHVPISNLF CLWFNEVDRFTSRDQISFSTVRD
Sbjct: 423 KKEGLIPYSEAKLPITSDVPEGCVVIREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRD 482

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALV 359
           K+  KTNWTVNMFLDCERRNFVVQKYHRD +L      P    PPP SL    P PP LV
Sbjct: 483 KIHEKTNWTVNMFLDCERRNFVVQKYHRD-VLEQMAHPPPVYPPPPPSLLQLPPSPPVLV 541

Query: 360 SDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTDSS 410
           ++ P +   ET+  +V+  P RK +P R  RRS SRRHRK ++  +DTD+S
Sbjct: 542 NEPPIQTTPETSTVKVIGAPVRK-APARRGRRSGSRRHRKVVAGAKDTDAS 591

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125520|ref|XP_002329825.1| predicted protein [Populus trichocarpa] gi|222870887|gb|EEF08018.1| predicted protein [Populus trichocarpa]

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 268/329 (81%), Positives = 298/329 (90%), Gaps = 1/329 (0%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           MPKVPSFSPV+KNLTYI E  L+RE EFGGSDFGGYP L QR++SYDIRESM VHCGFV+
Sbjct: 182 MPKVPSFSPVIKNLTYIQEDPLSREGEFGGSDFGGYPTLKQRSDSYDIRESMRVHCGFVQ 241

Query: 61  GK-PGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           GK PG+ TG+D+D+ D+  MEQCHG+VV SAIFGAFDDI QP NISEYS+ T+CF MFVD
Sbjct: 242 GKRPGQNTGFDMDKIDLDAMEQCHGVVVASAIFGAFDDIQQPRNISEYSKNTICFFMFVD 301

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           EETEAYLK NSGL+ ++K+GIWRIVV+HN PY+D RR GK+PKLL+HR+FPNARFSLWID
Sbjct: 302 EETEAYLKNNSGLNDSRKVGIWRIVVVHNLPYTDGRRNGKVPKLLSHRMFPNARFSLWID 361

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLELVVDPYQILER LWR+NATFAISRHY+RFDV +EAEANKAA KY+NASIDFQ+EFY
Sbjct: 362 GKLELVVDPYQILERFLWRENATFAISRHYRRFDVFIEAEANKAAGKYENASIDFQVEFY 421

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
           K EGLTPYSEAK PI SDVPEGCV+IREHVPISNLF CLWFNEVDRFTSRDQISFSTVRD
Sbjct: 422 KKEGLTPYSEAKFPIISDVPEGCVVIREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRD 481

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHRD 328
           K+  KTNWTVNMFLDC+RRNFVVQKYHRD
Sbjct: 482 KIHEKTNWTVNMFLDCQRRNFVVQKYHRD 510

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|17064856|gb|AAL32582.1| Unknown protein [Arabidopsis thaliana] gi|25083658|gb|AAN72102.1| Unknown protein [Arabidopsis thaliana]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/328 (80%), Positives = 293/328 (89%), Gaps = 1/328 (0%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           MP  PSFSPVLKNLTYI E  LNRE EFGGSDFGGYP L  RN+S+DI+E+MSVHCGFVK
Sbjct: 182 MPNAPSFSPVLKNLTYIYEEPLNRETEFGGSDFGGYPTLKHRNDSFDIKETMSVHCGFVK 241

Query: 61  G-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           G +PGR TG+D+DE D+L+M+QC GIVV SA+F AFDD+  P NIS+Y+ +TVCF MFVD
Sbjct: 242 GPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNISKYAEETVCFYMFVD 301

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           EETE+ LK   GLD  KK+GIWR+VV+HN PYSD RR GK+PKLL HR+FPNAR+SLWID
Sbjct: 302 EETESILKRERGLDGNKKVGIWRVVVVHNLPYSDGRRNGKVPKLLVHRMFPNARYSLWID 361

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLELVVDPYQILER LWRKNATFAISRHYKRFDVLVEAEANKAA KYDNASIDFQ++FY
Sbjct: 362 GKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEANKAAGKYDNASIDFQVDFY 421

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
           KNEGLTPYS AKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISFSTVRD
Sbjct: 422 KNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRD 481

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHR 327
           K+ AKTNWTV+MFLDCERRNFVVQ+YHR
Sbjct: 482 KIAAKTNWTVSMFLDCERRNFVVQRYHR 509

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15217874|ref|NP_174145.1| uncharacterized protein [Arabidopsis thaliana] gi|9795613|gb|AAF98431.1|AC021044_10 Unknown protein [Arabidopsis thaliana] gi|332192814|gb|AEE30935.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/328 (80%), Positives = 293/328 (89%), Gaps = 1/328 (0%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           MP  PSFSPVLKNLTYI E  LNRE EFGGSDFGGYP L  RN+S+DI+E+MSVHCGFVK
Sbjct: 182 MPNAPSFSPVLKNLTYIYEEPLNRETEFGGSDFGGYPTLKHRNDSFDIKETMSVHCGFVK 241

Query: 61  G-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           G +PGR TG+D+DE D+L+M+QC GIVV SA+F AFDD+  P NIS+Y+ +TVCF MFVD
Sbjct: 242 GPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNISKYAEETVCFYMFVD 301

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           EETE+ LK   GLD  KK+GIWR+VV+HN PYSD RR GK+PKLL HR+FPNAR+SLWID
Sbjct: 302 EETESILKRERGLDGNKKVGIWRVVVVHNLPYSDGRRNGKVPKLLVHRMFPNARYSLWID 361

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLELVVDPYQILER LWRKNATFAISRHYKRFDVLVEAEANKAA KYDNASIDFQ++FY
Sbjct: 362 GKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEANKAAGKYDNASIDFQVDFY 421

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
           KNEGLTPYS AKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISFSTVRD
Sbjct: 422 KNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRD 481

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHR 327
           K+ AKTNWTV+MFLDCERRNFVVQ+YHR
Sbjct: 482 KIAAKTNWTVSMFLDCERRNFVVQRYHR 509

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851266|ref|XP_002893514.1| hypothetical protein ARALYDRAFT_473032 [Arabidopsis lyrata subsp. lyrata] gi|297339356|gb|EFH69773.1| hypothetical protein ARALYDRAFT_473032 [Arabidopsis lyrata subsp. lyrata]

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 264/328 (80%), Positives = 293/328 (89%), Gaps = 1/328 (0%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           MP  PSFSPVLKNLTYI E  LNRE EFGGSDFGGYP L  RN+S+DI+E+MSVHCGFVK
Sbjct: 183 MPNAPSFSPVLKNLTYICEEPLNRETEFGGSDFGGYPTLKDRNDSFDIKETMSVHCGFVK 242

Query: 61  G-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           G +PGR TG+D+DE D+L+M+QC GIVV SA+F AFDD+  P NIS+Y+ +TVCF +FVD
Sbjct: 243 GPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNISKYAEETVCFYIFVD 302

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           EETE+ LK   GLD  KK+GIWR+VV+HN PYSD RR GK+PKLL HR+FPNAR+SLWID
Sbjct: 303 EETESILKRERGLDGNKKVGIWRVVVVHNLPYSDGRRNGKVPKLLVHRMFPNARYSLWID 362

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLELVVDPYQILER LWRKNATFAISRHYKRFDVLVEAEANKAA KYDNASIDFQ++FY
Sbjct: 363 GKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEANKAAGKYDNASIDFQVDFY 422

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
           KNEGLTPYS AKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISFSTVRD
Sbjct: 423 KNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRD 482

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHR 327
           K+ AKTNWTV+MFLDCERRNFVVQ+YHR
Sbjct: 483 KIAAKTNWTVSMFLDCERRNFVVQRYHR 510

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555317|ref|XP_003545980.1| PREDICTED: uncharacterized protein LOC100792761 [Glycine max]

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 280/409 (68%), Positives = 326/409 (79%), Gaps = 25/409 (6%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           +PK PS SPVLKNLT+I E  L R+ EFGGSDFGG+P L QRN S+DIRESMSVHCGFV+
Sbjct: 176 VPKFPSPSPVLKNLTFIYEETLIRDGEFGGSDFGGFPTLRQRNESFDIRESMSVHCGFVR 235

Query: 61  G-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           G KPGR TG+D+DE+D+L+MEQCHG+VV SAIFG FD+IN+P+NIS+YS++TVCF+MFVD
Sbjct: 236 GTKPGRNTGFDMDEDDLLEMEQCHGVVVASAIFGNFDEINEPTNISDYSKETVCFLMFVD 295

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           EETE YL+++  L  +KKIG+WRI+V HN PY+DARRTGKIPKLL HR+ PNAR+S+W+D
Sbjct: 296 EETEKYLRSSGRLGTSKKIGLWRIIVAHNLPYTDARRTGKIPKLLLHRMVPNARYSIWLD 355

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLELVVDPYQILER LWRKNATFAIS+HY+RFDV VEAEANKAA KY NASIDFQI+FY
Sbjct: 356 GKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFVEAEANKAAGKYGNASIDFQIDFY 415

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
           KNEGLTPY+EAKLP+ SDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISFSTVRD
Sbjct: 416 KNEGLTPYTEAKLPLISDVPEGCVIVREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRD 475

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALV 359
           KL ++ ++   MFLDCERRNFVVQKYHRD +     PV V L PPP              
Sbjct: 476 KLLSRVDFHFLMFLDCERRNFVVQKYHRDILERLAAPVDVALSPPP-------------- 521

Query: 360 SDLPKKFPLETTGERVVRVPTRKVSPRRGSRRSASRRHRKTISSDRDTD 408
                  P+ET  E+VV    R    R   RR  SRRHRK ++  RD +
Sbjct: 522 -------PVETLPEKVV---RRGPGRRGRDRRPGSRRHRKVVAGGRDIN 560

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449508920|ref|XP_004163444.1| PREDICTED: uncharacterized LOC101209711 [Cucumis sativus]

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 258/329 (78%), Positives = 289/329 (87%), Gaps = 1/329 (0%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           MP   S SPVLK L YI E  L RE EFGGSDFGGYP +AQR +S+DIRESM VHCGFV 
Sbjct: 184 MPNASSDSPVLKKLDYIYEENLRRETEFGGSDFGGYPTIAQRTDSFDIRESMRVHCGFVG 243

Query: 61  G-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           G KPGR TG+D++++D+ DMEQC G+VV SAIFG FD INQP+NISEY++ TVCF MF+D
Sbjct: 244 GIKPGRNTGFDINDDDLHDMEQCRGVVVASAIFGNFDVINQPTNISEYAKNTVCFFMFID 303

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           EETEA LK    L+ +KKIG+WRI+V+HN PY DARRTGKIPKLL HR+FPNAR+SLWID
Sbjct: 304 EETEASLKETGILESSKKIGLWRIIVVHNLPYKDARRTGKIPKLLVHRMFPNARYSLWID 363

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLELVVDPYQ+LER LWRKNATFAIS+HYKRFDV +EA+ANKAA KYDNASIDFQI+FY
Sbjct: 364 GKLELVVDPYQLLERFLWRKNATFAISKHYKRFDVFMEADANKAAGKYDNASIDFQIDFY 423

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
             EGLTPYSEAKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISF+TVRD
Sbjct: 424 VKEGLTPYSEAKLPITSDVPEGCVILREHVPISNLFSCLWFNEVDRFTSRDQISFATVRD 483

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHRD 328
           K+ AKTNWT+NMFLDCERRNFV+QKYHRD
Sbjct: 484 KIMAKTNWTINMFLDCERRNFVIQKYHRD 512

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457735|ref|XP_004146603.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101209711 [Cucumis sativus]

 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 258/329 (78%), Positives = 289/329 (87%), Gaps = 1/329 (0%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           MP   S SPVLK L YI E  L RE EFGGSDFGGYP +AQR +S+DIRESM VHCGFV 
Sbjct: 182 MPNASSDSPVLKKLDYIYEENLRRETEFGGSDFGGYPTIAQRTDSFDIRESMRVHCGFVG 241

Query: 61  G-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           G KPGR TG+D++++D+ DMEQC G+VV SAIFG FD INQP+NISEY++ TVCF MF+D
Sbjct: 242 GIKPGRNTGFDINDDDLHDMEQCRGVVVASAIFGNFDVINQPTNISEYAKNTVCFFMFID 301

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           EETEA LK    L+ +KKIG+WRI+V+HN PY DARRTGKIPKLL HR+FPNAR+SLWID
Sbjct: 302 EETEASLKETGILESSKKIGLWRIIVVHNLPYKDARRTGKIPKLLVHRMFPNARYSLWID 361

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLELVVDPYQ+LER LWRKNATFAIS+HYKRFDV +EA+ANKAA KYDNASIDFQI+FY
Sbjct: 362 GKLELVVDPYQLLERFLWRKNATFAISKHYKRFDVFMEADANKAAGKYDNASIDFQIDFY 421

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
             EGLTPYSEAKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISF+TVRD
Sbjct: 422 VKEGLTPYSEAKLPITSDVPEGCVILREHVPISNLFSCLWFNEVDRFTSRDQISFATVRD 481

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHRD 328
           K+ AKTNWT+NMFLDCERRNFV+QKYHRD
Sbjct: 482 KIMAKTNWTINMFLDCERRNFVIQKYHRD 510

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521368|ref|XP_003529328.1| PREDICTED: uncharacterized protein LOC100783387 [Glycine max]

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/412 (67%), Positives = 323/412 (78%), Gaps = 19/412 (4%)

Query: 1   MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
           MP +PS SPVL NLTY+ E  L+R+ EFGGSDFGGYP L QRN+S+DIRESM+VHCGFV+
Sbjct: 159 MPALPSPSPVLGNLTYVYEENLSRDGEFGGSDFGGYPTLKQRNDSFDIRESMTVHCGFVR 218

Query: 61  G-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
           G KPGR TG+D+D  D+ +MEQC G+VV SAIFG FD IN+P+NIS+YSRKTVCF+MFVD
Sbjct: 219 GIKPGRNTGFDIDGADLFEMEQCDGVVVASAIFGNFDVINEPNNISDYSRKTVCFLMFVD 278

Query: 120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
           E+TE YL ++  L  +KKIG+WR +V  N PY DARRTGKIPKLL HRL PNAR+S+W+D
Sbjct: 279 EQTEKYLISSGKLGISKKIGLWRTIVARNLPYPDARRTGKIPKLLLHRLVPNARYSIWLD 338

Query: 180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
           GKLELVVDPYQILER LWRKNATFAIS+HY+RFDV +EAEANKAA KYDNASIDFQIEFY
Sbjct: 339 GKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFIEAEANKAAGKYDNASIDFQIEFY 398

Query: 240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
           K EGLTPY+EAKLP+ SDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISFSTVRD
Sbjct: 399 KKEGLTPYTEAKLPLISDVPEGCVIVREHVPISNLFACLWFNEVDRFTSRDQISFSTVRD 458

Query: 300 KLWAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALV 359
           K+ ++ ++  NMFLDCERRNFVVQKYHRD +L   PP       PP  L V         
Sbjct: 459 KILSRVDFHFNMFLDCERRNFVVQKYHRDLLLRLAPPASPPPPSPPPPLPV--------- 509

Query: 360 SDLPKKFPLETTGERVVRVPTRKVSPRRGS-RRSASRRHRKTISSDRDTDSS 410
                   LET+ E+    P R+   RRG  RR+ SRRHRK ++  R+ + S
Sbjct: 510 --------LETSPEKGANSPIRRGPGRRGKDRRAGSRRHRKVVAGGREMEPS 553

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
TAIR|locus:2032137	581	AT1G28240 [Arabidopsis thalian	0.797	0.562	0.807	1.3e-148
TAIR|locus:2037053	540	AT1G53040 [Arabidopsis thalian	0.797	0.605	0.686	2.8e-128
TAIR|locus:2009253	735	EMB2756 "EMBRYO DEFECTIVE 2756	0.758	0.423	0.466	2.4e-69
TAIR|locus:2136907	711	AT4G09630 [Arabidopsis thalian	0.712	0.410	0.478	3.8e-69
TAIR|locus:2056750	460	AT2G02910 [Arabidopsis thalian	0.702	0.626	0.465	1.3e-68
TAIR|locus:2121194	499	AT4G38500 [Arabidopsis thalian	0.773	0.635	0.428	6.5e-67
TAIR|locus:2165457	463	AT5G42660 [Arabidopsis thalian	0.743	0.658	0.390	3.8e-53
TAIR|locus:2162065	462	AT5G46220 [Arabidopsis thalian	0.726	0.645	0.361	5.7e-43

TAIR|locus:2032137 AT1G28240 [Arabidopsis thaliana (taxid:3702)]

 Score = 1451 (515.8 bits), Expect = 1.3e-148, P = 1.3e-148
 Identities = 265/328 (80%), Positives = 293/328 (89%)

Query:     1 MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
             MP  PSFSPVLKNLTYI E  LNRE EFGGSDFGGYP L  RN+S+DI+E+MSVHCGFVK
Sbjct:   182 MPNAPSFSPVLKNLTYIYEEPLNRETEFGGSDFGGYPTLKHRNDSFDIKETMSVHCGFVK 241

Query:    61 G-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVD 119
             G +PGR TG+D+DE D+L+M+QC GIVV SA+F AFDD+  P NIS+Y+ +TVCF MFVD
Sbjct:   242 GPQPGRNTGFDIDEADLLEMKQCRGIVVASAVFDAFDDVKAPQNISKYAEETVCFYMFVD 301

Query:   120 EETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWID 179
             EETE+ LK   GLD  KK+GIWR+VV+HN PYSD RR GK+PKLL HR+FPNAR+SLWID
Sbjct:   302 EETESILKRERGLDGNKKVGIWRVVVVHNLPYSDGRRNGKVPKLLVHRMFPNARYSLWID 361

Query:   180 GKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY 239
             GKLELVVDPYQILER LWRKNATFAISRHYKRFDVLVEAEANKAA KYDNASIDFQ++FY
Sbjct:   362 GKLELVVDPYQILERFLWRKNATFAISRHYKRFDVLVEAEANKAAGKYDNASIDFQVDFY 421

Query:   240 KNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRD 299
             KNEGLTPYS AKLPITSDVPEGCVI+REHVPISNLF CLWFNEVDRFTSRDQISFSTVRD
Sbjct:   422 KNEGLTPYSVAKLPITSDVPEGCVILREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRD 481

Query:   300 KLWAKTNWTVNMFLDCERRNFVVQKYHR 327
             K+ AKTNWTV+MFLDCERRNFVVQ+YHR
Sbjct:   482 KIAAKTNWTVSMFLDCERRNFVVQRYHR 509

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2037053 AT1G53040 [Arabidopsis thaliana (taxid:3702)]

 Score = 1259 (448.2 bits), Expect = 2.8e-128, P = 2.8e-128
 Identities = 228/332 (68%), Positives = 275/332 (82%)

Query:     1 MPKVPSFSPVLKNLTYITE--PVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGF 58
             MPK P  SP+LKNLTYI E  PV   E+E GGS+FGGYP L  R NS+DI+ESM+VHCGF
Sbjct:   154 MPKYPFESPLLKNLTYIREESPVKPEESE-GGSEFGGYPSLEHRTNSFDIKESMTVHCGF 212

Query:    59 VKG-KPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMF 117
             +KG KPG  TG+D+DE+ + +++Q H ++V SAIFG +D I +P NISE +RK + F MF
Sbjct:   213 IKGTKPGHQTGFDIDEDILHELDQSHDVIVASAIFGKYDIIQEPVNISEMARKNIPFYMF 272

Query:   118 VDEETEAYLKANSGL-DRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSL 176
             VDEET  YLK  S   D  K++G+WRI+V+HN PY+DARR GK+PKLL HRLFPN R+S+
Sbjct:   273 VDEETHLYLKNTSSYTDDNKRVGLWRIIVVHNVPYTDARRNGKVPKLLLHRLFPNVRYSI 332

Query:   177 WIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQI 236
             W+D KL+LVVDPYQILER LWR N++FAISRHY+RFDV VEAEANKAA+KYDNASID+Q+
Sbjct:   333 WVDAKLQLVVDPYQILERFLWRTNSSFAISRHYRRFDVFVEAEANKAARKYDNASIDYQV 392

Query:   237 EFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFST 296
             EFYK EGLTPY+EAKLPITSDVPEGC IIREH+PI+NLF C+WFNEVDRFTSRDQ+SF+ 
Sbjct:   393 EFYKKEGLTPYTEAKLPITSDVPEGCTIIREHIPITNLFTCVWFNEVDRFTSRDQLSFAI 452

Query:   297 VRDKLWAKTNWTVNMFLDCERRNFVVQKYHRD 328
              RDK+  K +W++NMFLDCERRNFV Q YHRD
Sbjct:   453 ARDKIREKVDWSINMFLDCERRNFVKQVYHRD 484

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2009253 EMB2756 "EMBRYO DEFECTIVE 2756" [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
 Identities = 152/326 (46%), Positives = 201/326 (61%)

Query:    13 NLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRG-TGYDL 71
             +L YI +     E E     F G+  L +R +S+ + +   +HCGFVKG  G   TG+DL
Sbjct:   401 SLQYIEKEDKPDEEEQWEPRFAGHQSLQEREDSF-VAQDKKIHCGFVKGPKGSSSTGFDL 459

Query:    72 DEEDILDMEQCHGIVVVSAIFGAFDDINQPSN--ISEYSRKTVCFVMFVDEETEAYLKAN 129
              E+D   + +CH I V S IFG  D +  P+N  IS  SRK VCF++FVDE T   L A 
Sbjct:   460 TEDDTNYISRCH-IAVSSCIFGNSDRLRPPANKMISRLSRKNVCFIVFVDEITMQTLSAE 518

Query:   130 SGL-DRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDP 188
                 DR   IG+W++VV+ N PY+D RR GKIPK+L HRLFP+AR+S+W+D KL L +DP
Sbjct:   519 GHAPDRAGFIGLWKLVVVKNLPYADMRRVGKIPKMLPHRLFPSARYSIWLDSKLRLQLDP 578

Query:   189 YQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYS 248
               ILE  LWRK   +AIS HY R  +  E   NK   KY++  I+ Q +FYK +GLT ++
Sbjct:   579 LLILEYFLWRKGHEYAISNHYDRHCLWEEVAQNKKLNKYNHTVINQQFQFYKADGLTRFN 638

Query:   249 EA---KLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKT 305
              +   KL + S+VPEG  I+R H P+SNLF CLWFNEV+RFT RDQ+SF+    KL  + 
Sbjct:   639 ASDPFKL-LPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKL-RRM 696

Query:   306 N----WTVNMFLDCERRNFVVQKYHR 327
             N    + ++MF DCERR       HR
Sbjct:   697 NPDKPFNLHMFKDCERRKIAKLFRHR 722

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2136907 AT4G09630 [Arabidopsis thaliana (taxid:3702)]

 Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
 Identities = 146/305 (47%), Positives = 195/305 (63%)

Query:    33 FGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGR-GTGYDLDEEDILDMEQCHGIVVVSAI 91
             F G+  L +R +S+ ++E   +HCGFVK   G   TG+DL E+D   + +CH I V+S I
Sbjct:   396 FAGHQSLQEREDSFLVQEQ-KIHCGFVKAPEGLPSTGFDLTEDDANYISKCH-IAVISCI 453

Query:    92 FGAFDDINQPSN--ISEYSRKTVCFVMFVDEETEAYLKANSGL-DRTKKIGIWRIVVIHN 148
             FG  D +  P+N  +S  SRK VCFV+FVDE T   L A   + D    +G+W++VV+ N
Sbjct:   454 FGNSDRLRHPANKMVSSLSRKDVCFVVFVDEITMQTLSAEGQVPDGAGFVGLWKLVVVRN 513

Query:   149 PPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRH 208
              PY+D RR GKIPKLL HRLF +AR+S+W+D KL L +DP  ILE  LWR+   +AIS H
Sbjct:   514 LPYTDMRRVGKIPKLLPHRLFTSARYSIWLDSKLRLQLDPLVILEYFLWREGHEYAISNH 573

Query:   209 YKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEA---KLPITSDVPEGCVII 265
             Y R  +  E   NK   KY++  ID Q EFY+++GLT ++ +   KL + S+VPEG  I+
Sbjct:   574 YDRHCLWEEVAQNKKLNKYNHTVIDQQFEFYQSDGLTRFNASDPHKL-LPSNVPEGSFIV 632

Query:   266 REHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAK---TNWTVNMFLDCERRNFVV 322
             REH P+SNLF CLWFNEV+RFT RDQ+SF+    KL      T + ++MF DCERR    
Sbjct:   633 REHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLTRMNPDTPFNLHMFKDCERRKITK 692

Query:   323 QKYHR 327
                HR
Sbjct:   693 LFRHR 697

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2056750 AT2G02910 [Arabidopsis thaliana (taxid:3702)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 141/303 (46%), Positives = 197/303 (65%)

Query:    33 FGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIF 92
             FGG+  L++R  SY    + ++HCGFVKG     TG+DL E+D   M+ C  + V S IF
Sbjct:   155 FGGHQTLSERERSYSA-VNQTIHCGFVKG-----TGFDLSEKDRAYMKNCV-VSVSSCIF 207

Query:    93 GAFDDINQPSN--ISEYSRKTVCFVMFVDEETEAYLKANSGL-DRTKKIGIWRIVVIHNP 149
             G+ D + +P+   ISE+S++ VCFVMFVDE+T + L +   + D+   +G+W+ VV+ N 
Sbjct:   208 GSSDFLRRPATKKISEFSKRNVCFVMFVDEQTLSKLASEGHVPDKQGFVGLWKTVVVSNL 267

Query:   150 PYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHY 209
             PY+D R+TGK+PK L+HRLFP++R+S+W+D K+ L  DP  I++  LWR  + FAIS HY
Sbjct:   268 PYNDMRKTGKVPKFLSHRLFPSSRYSIWLDSKMRLTTDPMLIIDFFLWRTKSEFAISNHY 327

Query:   210 KRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPY--SEAKLPITSDVPEGCVIIRE 267
              R  V  E   NK   KY++++ID Q  FY+++GL  +  S+   P+ S VPEG  I+R 
Sbjct:   328 DRHCVWDEVLQNKRLNKYNHSAIDEQFMFYRSDGLKKFDPSDPNSPLPSYVPEGSFIVRA 387

Query:   268 HVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTN---WTVNMFLDCERRNFVVQK 324
             H P+SNLF CLWFNEVDRFTSRDQ+SF+    KL    +     +NMF DCERR      
Sbjct:   388 HTPMSNLFTCLWFNEVDRFTSRDQLSFAYTYLKLQRLNSDRPLRLNMFKDCERRALTKLF 447

Query:   325 YHR 327
             +HR
Sbjct:   448 HHR 450

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2121194 AT4G38500 [Arabidopsis thaliana (taxid:3702)]

 Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
 Identities = 143/334 (42%), Positives = 213/334 (63%)

Query:     1 MPKVPSFSPVLKNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVK 60
             +P   +   +++NLTY+TE   ++ ++F    FGG    ++R  S+ ++  M VHCGF+ 
Sbjct:   126 LPSDKTADTIVRNLTYVTEDESSK-SQF--PLFGGNISWSEREESFKLKPEMKVHCGFM- 181

Query:    61 GKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDE 120
               P RG G ++   D   +++C   VV + IF A+D+ +QPSNIS+ S    CF+M VDE
Sbjct:   182 --P-RG-GAEMSSLDKEYVKKCR-FVVATGIFDAYDEPHQPSNISKRSMNLFCFLMVVDE 236

Query:   121 ETEAYLKANSGLDRTKK----IGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSL 176
              +  +L+ N+ + +  +    +GIWR++++  PPY + RR GK+PK+L HRLFP A++S+
Sbjct:   237 VSLDFLRKNTTVRKDVEGGIWVGIWRLILLKTPPYDEPRRNGKVPKILTHRLFPEAQYSI 296

Query:   177 WIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQI 236
             WIDGK+EL+VDP  ILER+LWR   TFAI++H    ++  EA+A K  K+Y    +D  +
Sbjct:   297 WIDGKMELIVDPLLILERYLWRGKHTFAIAQHKHHRNIYEEADACKRRKRYARPLVDLHM 356

Query:   237 EFYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFST 296
             + Y+ EGL P+S  K  + SDVPEG VIIREH  ++NLF CLWFNEV   T RDQ+SF  
Sbjct:   357 KIYRYEGLEPWSIKKNTV-SDVPEGAVIIREHTAMNNLFSCLWFNEVHLLTPRDQLSFGY 415

Query:   297 VRDKLWAKTNWTVNMFLDCERRN-FVVQKYHRDH 329
             V D+L  K  + V MF +CE  + F +  + R+H
Sbjct:   416 VVDRL--KGAFKVFMFQNCEYNSLFELHPHIREH 447

GO:0005739 "mitochondrion" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165457 AT5G42660 [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 127/325 (39%), Positives = 185/325 (56%)

Query:     6 SFSPVLKNLTYITEPVLN----REAEFGGSDFG---GYPPLAQRNNSYDIRESMSVHCGF 58
             S SPV K + Y+T+  ++    R     G+ F    G    A+R NS+ +RE++S+HCGF
Sbjct:   135 SGSPV-KRVVYLTDTDVSVGEMRGVRGNGTRFNLFTGNQTFAERENSFQVRETVSLHCGF 193

Query:    59 VKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFV 118
                      G+ + ++D   M  C  +VV +  FG  D++ +P  +S+ S + VC+V F 
Sbjct:   194 FN----ENGGFRISDKDKKFMTSCE-VVVSTCAFGGGDNLYEPIGMSKTSSQKVCYVAFW 248

Query:   119 DEETEAYLKANSG-LDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLW 177
             DE T    +A    +D    IG WRIV++ + P++D R  GKIPK+LAHRLFP+A++S+W
Sbjct:   249 DEVTLTTQEAEGHKIDENDHIGKWRIVIVKDLPFTDQRLNGKIPKMLAHRLFPDAKYSIW 308

Query:   178 IDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIE 237
             +D K +   DP  +L+  LWR N+  AIS H  R  V  EA A     K     ++ QI 
Sbjct:   309 VDSKSQFRRDPLGVLDALLWRTNSVLAISEHGARSSVYDEANAVIKKHKATPEEVEVQIN 368

Query:   238 FYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTV 297
              Y+++ L P  + +      + E  VI+REH P++NLF+CLWFNEV RFTSRDQ+SF  V
Sbjct:   369 QYRHDKL-P-EDKRFNGKKALSEASVIVREHTPLTNLFMCLWFNEVVRFTSRDQLSFPYV 426

Query:   298 RDKLWA-KTNWTVNMFLDCERRNFV 321
                LW  K    +NMF  C R++ V
Sbjct:   427 ---LWRLKVLKNINMFPVCTRKDLV 448

GO:0005634 "nucleus" evidence=ISM

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2162065 AT5G46220 [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 117/324 (36%), Positives = 173/324 (53%)

Query:    12 KNLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDL 71
             +NL YI      +   FGG+ F      +  N+S +I   + V CGF +  P       +
Sbjct:   106 ENLRYIN----GKSESFGGN-FSTQKRFSYFNHS-NI--DVEVPCGFFRDFP-------V 150

Query:    72 DEEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEET-EAYLKANS 130
                D ++ME+C G+VV SAIF   D I QP  +   + +TVCF MF+D++T  +    N 
Sbjct:   151 SNSDRVEMEKC-GLVVASAIFNDHDKIRQPVGLGVKTLETVCFYMFIDDKTLNSLFHHNV 209

Query:   131 GLDRTK---KIGIWRIVVIHNPP--YSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELV 185
              L       ++G WRI+ I      Y +    G IPK L HRLFPN++FS+W+D K++L+
Sbjct:   210 ILKNNPSDYRVGAWRIIKISKSENLYLNPAMNGVIPKYLIHRLFPNSKFSIWVDAKIQLM 269

Query:   186 VDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKY-DNASIDFQIEFYKNEGL 244
             +DP  ++   L       AIS+H    + + EA A    KK+ D   +  Q+E Y   GL
Sbjct:   270 IDPLLLIHSMLVVPEVDMAISKHPFFVNTMEEAMATARWKKWGDVDGLRIQMETYCEHGL 329

Query:   245 TPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAK 304
              P+S +KLP  +DVP+  +I+R H   SNLF C  FNE++ F  RDQ++F+ VRD +  K
Sbjct:   330 KPWSSSKLPYPTDVPDTALILRRHGIRSNLFSCFMFNELEAFNPRDQLAFAFVRDHINPK 389

Query:   305 TNWTVNMFLDCERRNFVVQKYHRD 328
                 +NMF + E    VV +Y  +
Sbjct:   390 VK--MNMF-EVEVFEQVVVEYRHN 410


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.421    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      410       365   0.00084  117 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  262 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  27.59u 0.10s 27.69t   Elapsed:  00:00:01
  Total cpu time:  27.59u 0.10s 27.69t   Elapsed:  00:00:01
  Start:  Tue May 21 05:52:15 2013   End:  Tue May 21 05:52:16 2013

GO:0006672 "ceramide metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	410
pfam04765	306	pfam04765, DUF616, Protein of unknown function (DU	0.0

>gnl|CDD|218253 pfam04765, DUF616, Protein of unknown function (DUF616)

 Score =  509 bits (1313), Expect = 0.0
 Identities = 187/315 (59%), Positives = 231/315 (73%), Gaps = 10/315 (3%)

Query: 13  NLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLD 72
           NLTYI E   N+   +GG  FGG   L +R +S+D +E+M+VHCGFVK      TG+D+ 
Sbjct: 1   NLTYIEEEEKNKG--YGGPLFGGNQSLEERESSFDHKETMTVHCGFVK----PNTGFDIS 54

Query: 73  EEDILDMEQCHGIVVVSAIFGAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANS-G 131
           E D   ME+C  +VV SAIFG +D I QP  IS+ S+K VCFVMFVDEET + LK+    
Sbjct: 55  ESDRKYMEKCR-VVVASAIFGDYDKIRQPKGISKRSKKNVCFVMFVDEETLSTLKSEGHV 113

Query: 132 LDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQI 191
            D   ++G+WRIVV+ N PY+D RR GK+PK L HRLFPNAR+S+W+D KL+LVVDP  I
Sbjct: 114 PDDNGRVGLWRIVVVKNLPYTDPRRNGKVPKYLLHRLFPNARYSIWVDAKLQLVVDPLLI 173

Query: 192 LERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAK 251
           LER LWR N+ FAIS+HY R  V  EAEANK  KKY +ASID Q+EFY ++GLTP+S+ K
Sbjct: 174 LERFLWRTNSDFAISKHYFRHCVYEEAEANKRWKKYGDASIDEQMEFYCSDGLTPWSDPK 233

Query: 252 LPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNM 311
           LP+ SDVPEG VI+REH P+SNLF CLWFNEVDRFTSRDQ+SF+ VRDKL  +  + +NM
Sbjct: 234 LPLPSDVPEGAVIVREHTPMSNLFSCLWFNEVDRFTSRDQLSFAYVRDKL--RPKFKMNM 291

Query: 312 FLDCERRNFVVQKYH 326
           F DCERR+ VV   H
Sbjct: 292 FKDCERRSLVVLYRH 306

Family of uncharacterized proteins. Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	410
PF04765	305	DUF616: Protein of unknown function (DUF616); Inte	100.0
cd04194	248	GT8_A4GalT_like A4GalT_like proteins catalyze the	95.0
cd00505	246	Glyco_transf_8 Members of glycosyltransferase fami	92.84
PF01501	250	Glyco_transf_8: Glycosyl transferase family 8; Int	90.52

>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function

Probab=100.00  E-value=5.8e-118  Score=874.36  Aligned_cols=304  Identities=59%  Similarity=1.005  Sum_probs=297.3

Q ss_pred             ceeeeecCCcccccCCCCCCCCCCCChhhccccccCCCCeeeecccccCCCCCCCCccCChhhHHHHhccCcEEEEEeee
Q 015277           13 NLTYITEPVLNREAEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGIVVVSAIF   92 (410)
Q Consensus        13 ~l~y~~~~~~~~~~~~~~~~FgG~~s~~~r~~sf~~~~~~~vhCgf~~g~~~~~~gf~i~e~d~~~m~~c~kvVVyTAIF   92 (410)
                      ||+||.+|+.+.  +.++++|||||||+||++||+++++|+|||||++     ||||||+|.|+.||++|+ ||||||||
T Consensus         1 nl~y~~~~~~~~--~~~~~~f~g~~s~~~R~~sf~~~~~~~v~Cgf~~-----~~gf~i~~~d~~~m~~c~-vvV~saIF   72 (305)
T PF04765_consen    1 NLTYIEEENKPE--SGRGPSFGGNQSLEERESSFDIQEDMTVHCGFVK-----NTGFDISESDRRYMEKCR-VVVYSAIF   72 (305)
T ss_pred             CCcccccccccc--cCCCCCcCCcCCHHHHHHhcCCCCCceecccccc-----CCCCCCCHHHHHHHhcCC-EEEEEEec
Confidence            899999998766  8899999999999999999999999999999999     799999999999999999 99999999


Q ss_pred             CCCcccCCCCCCCccCCCCeeEEEEechhhHHHHhhccCC-CCCCcccceEEEEcCCCCCCCccccCCcceeecccCCCC
Q 015277           93 GAFDDINQPSNISEYSRKTVCFVMFVDEETEAYLKANSGL-DRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPN  171 (410)
Q Consensus        93 G~YD~L~~P~~is~~s~~~VcFi~FtD~~tl~~l~~~~~~-~~~~~~g~WrIV~V~~lpy~D~rrngRipKiLpHrLFPn  171 (410)
                      |+||+|+||.+||+++.++|||+||||+.|+++|++++.+ ++++++|+||||+|+++||+|+|||||+||||||+||||
T Consensus        73 G~yD~l~qP~~i~~~s~~~vcf~mF~D~~t~~~l~~~~~~~~~~~~ig~WrIv~v~~lp~~d~rr~~r~~K~lpHrlfp~  152 (305)
T PF04765_consen   73 GNYDKLRQPKNISEYSKKNVCFFMFVDEETLKSLESEGHIPDENKKIGIWRIVVVKNLPYDDPRRNGRIPKLLPHRLFPN  152 (305)
T ss_pred             CCCccccCchhhCHHHhcCccEEEEEehhhHHHHHhcCCccccccccCceEEEEecCCCCcchhhcCcccceeccccCCC
Confidence            9999999999999999999999999999999999998865 888999999999999999999999999999999999999


Q ss_pred             CCEEEEEeCceEEeeCHHHHHHHHhhccCCcEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHHHHCCCCCcccCC
Q 015277          172 ARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAK  251 (410)
Q Consensus       172 y~ySIWIDgki~L~~DP~~lLe~~L~r~~~~~Ais~Hp~R~cvYEEA~a~~~~~K~~~~~I~~Qm~~Yk~eGlp~~~~~k  251 (410)
                      |+|||||||||+|++||++||+++||+++++|||++||.|+||||||+||++++||+.+.|++||++|+++|||+|+.+|
T Consensus       153 y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H~~R~cvyeEa~a~~~~~k~~~~~I~~Qm~~Y~~eGlp~~s~~k  232 (305)
T PF04765_consen  153 YDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKHPERNCVYEEAEACKRLGKYDPERIDEQMEFYKQEGLPPWSPAK  232 (305)
T ss_pred             CceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCCCCcccHHHHHHHHHHhcCCChHHHHHHHHHHHHcCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcceEEEcccCCchhHHHHHHHHHHhcCCCCCCchHHHHHhHhccCCCccccccccchhhhhhhhccc
Q 015277          252 LPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKLWAKTNWTVNMFLDCERRNFVVQKYH  326 (410)
Q Consensus       252 ~P~~sgL~E~~vIiR~H~~~snlfmclWfnEv~rfs~RDQLSF~Yvl~Kl~~~~~~~~nMF~dcer~~~v~~~~h  326 (410)
                      +|+.+|||||+||||+|++++|+|||+|||||++||+||||||+||+||++.  +|++|||+||||+++|++++|
T Consensus       233 ~~l~s~v~E~~iIiR~H~~~~nlf~clWfnEv~rfs~RDQLSF~Yv~wk~~~--~~~~~mf~~~~~~~~~~~~~h  305 (305)
T PF04765_consen  233 LPLPSDVPEGNIIIRKHNPMSNLFMCLWFNEVERFSPRDQLSFPYVLWKLGP--KFKLNMFKDCERRQLVVLYRH  305 (305)
T ss_pred             cccccCCccceEEEecCCchhHHHHHHHHHHHhcCCCcccchHHHHHHHhCC--cccchhhhHHHHHHHHHhcCC
Confidence            9999999999999999999999999999999999999999999999999996  699999999999999999998

The function of is unknown although a number of the members are thought to be glycosyltransferases.

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface

Probab=95.00  E-value=0.038  Score=52.10  Aligned_cols=97  Identities=19%  Similarity=0.219  Sum_probs=59.6

Q ss_pred             CCeeEEEEechhhHHHHhhccCCCCCCcccceEEEEcCCCCCCCcc-ccCC-----cceeecccCCCCCCEEEEEeCceE
Q 015277          110 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYSDAR-RTGK-----IPKLLAHRLFPNARFSLWIDGKLE  183 (410)
Q Consensus       110 ~~VcFi~FtD~~tl~~l~~~~~~~~~~~~g~WrIV~V~~lpy~D~r-rngR-----ipKiLpHrLFPny~ySIWIDgki~  183 (410)
                      ..++|++++|+.+......-..+.... ...-+++.++...+.+.. ...+     +.|++...+||+|+.-||||+-+.
T Consensus        29 ~~~~~~il~~~is~~~~~~L~~~~~~~-~~~i~~~~i~~~~~~~~~~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~l  107 (248)
T cd04194          29 RDYDFYILNDDISEENKKKLKELLKKY-NSSIEFIKIDNDDFKFFPATTDHISYATYYRLLIPDLLPDYDKVLYLDADII  107 (248)
T ss_pred             CceEEEEEeCCCCHHHHHHHHHHHHhc-CCeEEEEEcCHHHHhcCCcccccccHHHHHHHHHHHHhcccCEEEEEeCCEE
Confidence            478999999875543322111110000 122344544332121111 1222     347889999999999999999999


Q ss_pred             EeeCHHHHHHHHhhccCCcEEEecCC
Q 015277          184 LVVDPYQILERHLWRKNATFAISRHY  209 (410)
Q Consensus       184 L~~DP~~lLe~~L~r~~~~~Ais~Hp  209 (410)
                      +.+|+..|.+.-+  ++..+|+..|.
T Consensus       108 v~~di~~L~~~~~--~~~~~aa~~d~  131 (248)
T cd04194         108 VLGDLSELFDIDL--GDNLLAAVRDP  131 (248)
T ss_pred             ecCCHHHHhcCCc--CCCEEEEEecc
Confidence            9999999987544  46778887764

The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis

Probab=92.84  E-value=0.62  Score=44.26  Aligned_cols=160  Identities=13%  Similarity=0.181  Sum_probs=93.1

Q ss_pred             CCeeEEEEechhhHHHHhhccCCCCCCcccceEEEEcCCCCCC------CccccCCcceeecccCCCCCCEEEEEeCceE
Q 015277          110 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPYS------DARRTGKIPKLLAHRLFPNARFSLWIDGKLE  183 (410)
Q Consensus       110 ~~VcFi~FtD~~tl~~l~~~~~~~~~~~~g~WrIV~V~~lpy~------D~rrngRipKiLpHrLFPny~ySIWIDgki~  183 (410)
                      +.+.|+.++|..+....+.-..+... .....+++.++...+.      ......-+.|++...|||+++--||+|+-+.
T Consensus        29 ~~~~~~il~~~is~~~~~~L~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~i  107 (246)
T cd00505          29 KPLRFHVLTNPLSDTFKAALDNLRKL-YNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDADIL  107 (246)
T ss_pred             CCeEEEEEEccccHHHHHHHHHHHhc-cCceEEEEeccccCcchhhhhcCccccceeHHHHHHHHhhccCeEEEEcCCee
Confidence            47889999988655322211111000 0123445555432221      2223445789999999999999999999999


Q ss_pred             EeeCHHHHHHHHhhccCCcEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHH-HHCCCCCcccCCCCCCCCCCcce
Q 015277          184 LVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY-KNEGLTPYSEAKLPITSDVPEGC  262 (410)
Q Consensus       184 L~~DP~~lLe~~L~r~~~~~Ais~Hp~R~cvYEEA~a~~~~~K~~~~~I~~Qm~~Y-k~eGlp~~~~~k~P~~sgL~E~~  262 (410)
                      +..|+..|.+--+  ++..+|+..-..    ..      ...           +.| +..|++.        ....+-++
T Consensus       108 v~~di~~L~~~~l--~~~~~aav~d~~----~~------~~~-----------~~~~~~~~~~~--------~~~yfNsG  156 (246)
T cd00505         108 VLTDIDELWDTPL--GGQELAAAPDPG----DR------REG-----------KYYRQKRSHLA--------GPDYFNSG  156 (246)
T ss_pred             eccCHHHHhhccC--CCCeEEEccCch----hh------hcc-----------chhhcccCCCC--------CCCceeee
Confidence            9999999998666  466788864321    00      000           111 1223321        22345567


Q ss_pred             EEEcccCC-----chhHHHHHHHHHHhcCCCCCCchHHHHHhHh
Q 015277          263 VIIREHVP-----ISNLFVCLWFNEVDRFTSRDQISFSTVRDKL  301 (410)
Q Consensus       263 vIiR~H~~-----~snlfmclWfnEv~rfs~RDQLSF~Yvl~Kl  301 (410)
                      |++=+-..     +.......|.+...+..--||=.++.++...
T Consensus       157 Vmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~  200 (246)
T cd00505         157 VFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQV  200 (246)
T ss_pred             eEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcC
Confidence            77732221     2222234455555678889999999998875

Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=90.52  E-value=0.41  Score=43.62  Aligned_cols=116  Identities=15%  Similarity=0.152  Sum_probs=65.9

Q ss_pred             CCcceeecccCCCCCCEEEEEeCceEEeeCHHHHHHHHhhccCCcEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHH
Q 015277          158 GKIPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIE  237 (410)
Q Consensus       158 gRipKiLpHrLFPny~ySIWIDgki~L~~DP~~lLe~~L~r~~~~~Ais~Hp~R~cvYEEA~a~~~~~K~~~~~I~~Qm~  237 (410)
                      .-+.|++.+.+|++|+--||+|+-+.+.+|+..|.+.-+  ++..+|+...                         ....
T Consensus        85 ~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~--~~~~~~a~~~-------------------------~~~~  137 (250)
T PF01501_consen   85 ATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDL--QGKYLAAVED-------------------------ESFD  137 (250)
T ss_dssp             GGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC-----TTSSEEEEE-----------------------------H
T ss_pred             HHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccc--hhhhcccccc-------------------------chhh
Confidence            344689999999999999999999999999999998666  3666777666                         0001


Q ss_pred             HHHHCCCCCcccCCCCCCCCCCcceEEEcccCCch-hHHHHHHHHHHhc----CCCCCCchHHHHHhHh
Q 015277          238 FYKNEGLTPYSEAKLPITSDVPEGCVIIREHVPIS-NLFVCLWFNEVDR----FTSRDQISFSTVRDKL  301 (410)
Q Consensus       238 ~Yk~eGlp~~~~~k~P~~sgL~E~~vIiR~H~~~s-nlfmclWfnEv~r----fs~RDQLSF~Yvl~Kl  301 (410)
                      .+ ..+-...+....+...+.+-++|++=+-.... +.+...+.+.++.    ..--||=-|++++...
T Consensus       138 ~~-~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~  205 (250)
T PF01501_consen  138 NF-PNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGN  205 (250)
T ss_dssp             HH-HTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTG
T ss_pred             hh-hhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccce
Confidence            01 11111122223344566777887774322211 1122322222222    4558999999998844

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	410
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 9e-08
 Identities = 53/383 (13%), Positives = 110/383 (28%), Gaps = 126/383 (32%)

Query: 26  AEFGGSDFGGYPPLAQRNNSYDIRESMSVHCGFVKGKPGRGTGYDLDEEDILDMEQCHGI 85
            +F  +    +  L   + +    E  S+   ++  +P      DL  E    +   +  
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ-----DLPRE----VLTTNPR 328

Query: 86  VVVSAIFGAF--DDINQPSNISEYSRKTVCFVM--FVDEETEAYLKANSGLDRTKKIGIW 141
            +  +I      D +    N    +   +  ++   ++    A  +         ++ ++
Sbjct: 329 RL--SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR-----KMFDRLSVF 381

Query: 142 RIVVIHNPPYSDARRTGKIP-KLLAHRLFPNARFSLWIDGK---LELVVDP---YQILER 194
                       A     IP  LL+          +W D     + +VV+    Y ++E+
Sbjct: 382 P---------PSA----HIPTILLS---------LIWFDVIKSDVMVVVNKLHKYSLVEK 419

Query: 195 HLWRKNATFAISRHYKRFDVLVEAEAN---------KAAKKYDNASIDFQIE---FYKNE 242
               K +T +I   Y    V +E E              K +D+  +        FY + 
Sbjct: 420 --QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477

Query: 243 GLTPYSEAKLPITSDVPEGCVIIREHVPISNLFVCLWFNEVDRFTSRDQISFSTVRDKL- 301
           G   +    +              EH     LF  ++ +   RF          +  K+ 
Sbjct: 478 G---HHLKNI--------------EHPERMTLFRMVFLD--FRF----------LEQKIR 508

Query: 302 -----WAKTNWTVNMFLDCERRNFVVQKYHRDHILPNPPPVPVDLEPPPLSLAVEAPPPP 356
                W  +   +N           ++ Y + +I  N                   P   
Sbjct: 509 HDSTAWNASGSILNTLQQ-------LKFY-KPYICDN------------------DPKYE 542

Query: 357 ALVSDLPKKFPLETTGERVVRVP 379
            LV+ +   F L    E ++   
Sbjct: 543 RLVNAI-LDF-LPKIEENLICSK 563

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 8e-06
 Identities = 58/360 (16%), Positives = 105/360 (29%), Gaps = 110/360 (30%)

Query: 70  DLDEEDILDMEQCHGIVVVSAIFGAFDDI-NQPSNISEYSRKTVCFVMFVDEETEAYLKA 128
           + D +D+ DM +    ++        D I      +S   R    F   + ++ E   K 
Sbjct: 32  NFDCKDVQDMPK---SILSKE---EIDHIIMSKDAVSGTLR---LFWTLLSKQEEMVQKF 82

Query: 129 -NSGLDRTKKIGIWRIVVIHNPPYSDARRTGKIPKLLAHRLFPNARFSLWIDGKLELVVD 187
               L    K   + +  I       +  T         R++   R  L+ D +   V  
Sbjct: 83  VEEVLRINYK---FLMSPIKTEQRQPSMMT---------RMYIEQRDRLYNDNQ---VFA 127

Query: 188 PYQILERHLWRKNATFAISRHYKRFD----VLVE--AEANK---AAKKYDNASI----DF 234
            Y     ++ R      + +          VL++    + K   A     +  +    DF
Sbjct: 128 KY-----NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF 182

Query: 235 QIEFYKNEG------------------LTPYSEAKLPITSDVPEGCVIIREHVPISNLFV 276
           +I F+ N                    + P   ++   +S++      I+    +  L  
Sbjct: 183 KI-FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE--LRRLLK 239

Query: 277 ------CL------WFNEV-DRF--------TSRDQISFSTVRDKLWAKTNWTVNMFLDC 315
                 CL         +  + F        T+R       V D L A T  T ++ LD 
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF----KQVTDFLSAAT--TTHISLDH 293

Query: 316 ERRNF-------VVQKY--HRDHILPNPPPVPVDLEPPPLSLAVEAPPPPALVSDLPKKF 366
                       ++ KY   R   LP        L   P  L++ A      + D    +
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLP-----REVLTTNPRRLSIIA----ESIRDGLATW 344

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	410
3tzt_A	276	Glycosyl transferase family 8; structural genomics	81.68
1g9r_A	311	Glycosyl transferase; alpha-beta structure; HET: U	80.75

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0

Probab=81.68  E-value=0.73  Score=43.55  Aligned_cols=96  Identities=18%  Similarity=0.191  Sum_probs=55.3

Q ss_pred             CCeeEEEEechhhHHHHhhccCCCCCCccc-ceEEEEcCCCCCCCccccCC-----cceeecccCCC-CCCEEEEEeCce
Q 015277          110 KTVCFVMFVDEETEAYLKANSGLDRTKKIG-IWRIVVIHNPPYSDARRTGK-----IPKLLAHRLFP-NARFSLWIDGKL  182 (410)
Q Consensus       110 ~~VcFi~FtD~~tl~~l~~~~~~~~~~~~g-~WrIV~V~~lpy~D~rrngR-----ipKiLpHrLFP-ny~ySIWIDgki  182 (410)
                      ..++|++++|+.+......-..+-.  ..| .-+++.++...+.....+.+     +.|++...+|| +++--||+|+-+
T Consensus        34 ~~~~~~il~~~is~~~~~~L~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~  111 (276)
T 3tzt_A           34 RIFDVYLIHSRISEDKLKDLGEDLK--KFSYTLYPIRATDDLFSFAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDM  111 (276)
T ss_dssp             CCEEEEEEESCCCHHHHHHHHHHHH--TTTCEEEEEECC-------------CHHHHHHHTHHHHSCTTCCEEEEECSSE
T ss_pred             CceEEEEEeCCCCHHHHHHHHHHHH--HcCCEEEEEEeCHHHHhcCccccccCHHHHHHHHHHHHcccccCeEEEEeCCe
Confidence            4789999999765432211000000  011 22333333322222111222     56888899999 699999999999


Q ss_pred             EEeeCHHHHHHHHhhccCCcEEEecCC
Q 015277          183 ELVVDPYQILERHLWRKNATFAISRHY  209 (410)
Q Consensus       183 ~L~~DP~~lLe~~L~r~~~~~Ais~Hp  209 (410)
                      .+.+|+..|.+.-+  ++..+|+..+.
T Consensus       112 iv~~di~~L~~~dl--~~~~~aav~d~  136 (276)
T 3tzt_A          112 LVINPLDDLLRTDI--SDYILAAASHT  136 (276)
T ss_dssp             EECSCSHHHHTCCC--TTSSEEEEEC-
T ss_pred             eecCCHHHHhhcCC--CCCeEEEEEec
Confidence            99999999987444  45678887654

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*

Probab=80.75  E-value=1.3  Score=42.12  Aligned_cols=109  Identities=12%  Similarity=0.135  Sum_probs=66.9

Q ss_pred             cceeecccCCCCCCEEEEEeCceEEeeCHHHHHHHHhhccCCcEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHH
Q 015277          160 IPKLLAHRLFPNARFSLWIDGKLELVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFY  239 (410)
Q Consensus       160 ipKiLpHrLFPny~ySIWIDgki~L~~DP~~lLe~~L~r~~~~~Ais~Hp~R~cvYEEA~a~~~~~K~~~~~I~~Qm~~Y  239 (410)
                      +.|++...+||+++-.||||+-+.+.+|+..|.+.=+  ++..+|+..+    | +.+      ..+          ...
T Consensus        84 y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l--~~~~~aav~d----~-~~~------~~~----------~~~  140 (311)
T 1g9r_A           84 YARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDL--GDNWLGASID----L-FVE------RQE----------GYK  140 (311)
T ss_dssp             GGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCC--TTCSEEEEEC----H-HHH------TST----------THH
T ss_pred             HHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCC--CCcEEEEEec----c-chh------hhH----------HHH
Confidence            4577778889999999999999999999999887434  4566777653    2 111      010          112


Q ss_pred             HHCCCCCcccCCCCCCCCCCcceEEEcccC-----CchhHHHHHHHHHHh-cCCCCCCchHHHHHhH
Q 015277          240 KNEGLTPYSEAKLPITSDVPEGCVIIREHV-----PISNLFVCLWFNEVD-RFTSRDQISFSTVRDK  300 (410)
Q Consensus       240 k~eGlp~~~~~k~P~~sgL~E~~vIiR~H~-----~~snlfmclWfnEv~-rfs~RDQLSF~Yvl~K  300 (410)
                      ...|+++        ..+.+-++|++=+-.     ...+. ...|.++.. ++.--||=-++.++..
T Consensus       141 ~~~~~~~--------~~~yfNsGv~linl~~~r~~~~~~~-~~~~~~~~~~~~~~~DQd~lN~~f~~  198 (311)
T 1g9r_A          141 QKIGMAD--------GEYYFNAGVLLINLKKWRRHDIFKM-SSEWVEQYKDVMQYQDQDILNGLFKG  198 (311)
T ss_dssp             HHTTCCT--------TSCCEEEEEEEECHHHHTTSCHHHH-HHHHHHHHTTTCSSHHHHHHHHHHTT
T ss_pred             HhcCCCC--------CCceEeeeeeeeeHHHHHhcchHHH-HHHHHHhccCcCccCCcCHHHHHHcC
Confidence            3446643        234566788763221     22222 123444432 3555799888888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	410
d1ga8a_	282	Galactosyltransferase LgtC {Neisseria meningitidis	94.4

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=94.40  E-value=0.045  Score=48.57  Aligned_cols=158  Identities=12%  Similarity=0.077  Sum_probs=89.3

Q ss_pred             CCeeEEEEechhhHHHHhhccCCCCCCcccceEEEEcCCCCC-CCccccCC-----cceeecccCCCCCCEEEEEeCceE
Q 015277          110 KTVCFVMFVDEETEAYLKANSGLDRTKKIGIWRIVVIHNPPY-SDARRTGK-----IPKLLAHRLFPNARFSLWIDGKLE  183 (410)
Q Consensus       110 ~~VcFi~FtD~~tl~~l~~~~~~~~~~~~g~WrIV~V~~lpy-~D~rrngR-----ipKiLpHrLFPny~ySIWIDgki~  183 (410)
                      ..++|++++|+.+......-..+-... .-.-+.+.+...-+ ..+....+     +.+++.+.+||+++-.||||+=+.
T Consensus        29 ~~~~~~il~~~~~~~~~~~l~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~i  107 (282)
T d1ga8a_          29 TEIRFHVLDAGISEANRAAVAANLRGG-GGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVL  107 (282)
T ss_dssp             SCCEEEEEESSCCHHHHHHHHHTSGGG-TTTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEE
T ss_pred             CCEEEEEEcCCCCHHHHHHHHHHHHHc-CCeEEEEECCchHhccccccccccCHHHHHHHHHhhhCCccceEEEecCCEE
Confidence            467888888876554322111110111 11234455432111 11212222     467788899999999999999999


Q ss_pred             EeeCHHHHHHHHhhccCCcEEEecCCCCCCHHHHHHHHHHhccCChHHHHHHHHHHHHCCCCCcccCCCCCCCCCCcceE
Q 015277          184 LVVDPYQILERHLWRKNATFAISRHYKRFDVLVEAEANKAAKKYDNASIDFQIEFYKNEGLTPYSEAKLPITSDVPEGCV  263 (410)
Q Consensus       184 L~~DP~~lLe~~L~r~~~~~Ais~Hp~R~cvYEEA~a~~~~~K~~~~~I~~Qm~~Yk~eGlp~~~~~k~P~~sgL~E~~v  263 (410)
                      +..|+..|.+--+  ++..+|+..+...                     ..+-......|+.+        ....+-+||
T Consensus       108 v~~dl~~L~~~~~--~~~~~aa~~d~~~---------------------~~~~~~~~~~~~~~--------~~~yfNsGV  156 (282)
T d1ga8a_         108 VRDSLTPLWDTDL--GDNWLGASIDLFV---------------------ERQEGYKQKIGMAD--------GEYYFNAGV  156 (282)
T ss_dssp             ECSCCHHHHTCCC--TTCSEEEEECHHH---------------------HTSTTHHHHTTCCT--------TSCCEEEEE
T ss_pred             EecchHHHHhccc--ccceeeeehhhhh---------------------hhhhhhHHHhCCCC--------CCceeecce
Confidence            9999999886444  4567777654211                     01112233456643        345567788


Q ss_pred             EEcccC-----CchhHHHHHHHHHHh-cCCCCCCchHHHHHhH
Q 015277          264 IIREHV-----PISNLFVCLWFNEVD-RFTSRDQISFSTVRDK  300 (410)
Q Consensus       264 IiR~H~-----~~snlfmclWfnEv~-rfs~RDQLSF~Yvl~K  300 (410)
                      ++=...     .+...++ .|.++.. .+.--||=.++.++..
T Consensus       157 ml~n~~~~r~~~~~~~~~-~~~~~~~~~~~~~DQd~LN~~f~~  198 (282)
T d1ga8a_         157 LLINLKKWRRHDIFKMSS-EWVEQYKDVMQYQDQDILNGLFKG  198 (282)
T ss_dssp             EEECHHHHTTSCHHHHHH-HHHHHHTTTCSSTHHHHHHHHHTT
T ss_pred             eeechhhhhhhhHHHHHH-HHHHhcccCcccCchhHHHHHhcC
Confidence            764321     3344433 4445543 4556899999988753