Citrus Sinensis ID: 015279

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET
ccccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHHHccccccEEEEEEEccccHHHHHHHHHcccccccEEEEEEccccccccccHHHHHHHHHccccccccccccccccccccccccHHHHccccccccccccHHHHHHHHHccccccccEEEEEEccEEEccccHHHHHccccccEEEEEEccccccHHHHHHHHHccccccHHHHHcccccccccccccHHHHcHHHHHHHcHHHHHHHHHHHHHcccccccccccccHHHHHHccccccccccccccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHccccHHHHHcccccc
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccHHHccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHcccccccEEEEEEccccccccccccHHHHHHccHHHcEEEEcccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHcHcccEEEEEcccEEEEEccHHHHcEcccccEEcccccccccccccccHHHHcccccccHHHHccccccHHHHHcccEEEEHHHHHHccHHHHHHHHHHHHHccccEEEEcccccccEEEEcccccccccccEEccccccccccHHHHcccEEEEEccccccHHHEccccccccHHHHcccccHHHHHcccccc
MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKhfaassipkgihclslrltdeyssnaharrqlpspellpllsdnsyhhfILSTDNILAASVVVTSAvqsslkpeKIVFHVITDKKTYAGMHSwfalnpvspaiVEVKgihqfdwltrenvpvleavenhdgirnyyhgnhvaganlsdttprtFASKLQARSPKYISLLNHLRiyipelfphldkvvfldddiviqrdlsplweidlggkvngavetcrgedewvmskrfrnyfnfshpliakhldpeecawaygMNIFDLRAWRKTNIRETYHSWLKENLKSNLtmwklgtlppaliafkghvhpidpswhllglgyqnktsieSVKKAAVIHYngqskpwlqiGFEHLRPFWAKYVNYSNDFVRNCHILET
mknnqydaktfgFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSavqsslkpekiVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLsplweidlggkvngavETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET
MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQlpspellpllsDNSYHHFILSTDNILaasvvvtsavqssLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET
*********TFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEY**************LLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHIL**
******DAKTFGFMLRAMMEKFE********A*LMNKHFAASSIPKGIHCLSLRLTDEY********************DNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHI***
MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET
***NQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNH********TTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHIL**
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MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query410 2.2.26 [Sep-21-2011]
Q8GWT1532 Probable galacturonosyltr yes no 0.997 0.768 0.899 0.0
Q0WV13533 Probable galacturonosyltr no no 0.997 0.767 0.892 0.0
Q9FH36535 Probable galacturonosyltr no no 0.992 0.760 0.594 1e-151
Q8L4B0540 Probable galacturonosyltr no no 0.978 0.742 0.490 1e-116
Q9LE59673 Polygalacturonate 4-alpha no no 0.936 0.570 0.438 1e-103
Q93ZX7616 Probable galacturonosyltr no no 0.939 0.625 0.455 1e-103
Q9LSG3559 Galacturonosyltransferase no no 0.936 0.686 0.440 2e-96
Q0WQD2680 Probable galacturonosyltr no no 0.960 0.579 0.415 3e-95
Q949Q1537 Probable galacturonosyltr no no 0.943 0.720 0.388 4e-93
Q9SKT6536 Probable galacturonosyltr no no 0.929 0.710 0.442 2e-90
>sp|Q8GWT1|GAUTE_ARATH Probable galacturonosyltransferase 14 OS=Arabidopsis thaliana GN=GAUT14 PE=2 SV=1 Back     alignment and function desciption
 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/409 (89%), Positives = 398/409 (97%)

Query: 1   MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS 60
           MKNN YDAKTF  +LRAMMEKFER++RESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS
Sbjct: 124 MKNNHYDAKTFALVLRAMMEKFERDMRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS 183

Query: 61  SNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITD 120
           SNAHARRQLPSPE LP+LSDN+YHHFILSTDNILAASVVV+SAVQSS KPEKIVFH+ITD
Sbjct: 184 SNAHARRQLPSPEFLPVLSDNAYHHFILSTDNILAASVVVSSAVQSSSKPEKIVFHIITD 243

Query: 121 KKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAG 180
           KKTYAGMHSWFALN V+PAIVEVKG+HQFDWLTRENVPVLEAVE+H+G+R+YYHGNHVAG
Sbjct: 244 KKTYAGMHSWFALNSVAPAIVEVKGVHQFDWLTRENVPVLEAVESHNGVRDYYHGNHVAG 303

Query: 181 ANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240
           ANL++TTPRTFASKLQ+RSPKYISLLNHLRIYIPELFP+LDKVVFLDDDIV+Q DL+PLW
Sbjct: 304 ANLTETTPRTFASKLQSRSPKYISLLNHLRIYIPELFPNLDKVVFLDDDIVVQGDLTPLW 363

Query: 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRA 300
           ++DLGGKVNGAVETCRGEDEWVMSKR RNYFNFSHPLIAKHLDPEECAWAYGMNIFDL+A
Sbjct: 364 DVDLGGKVNGAVETCRGEDEWVMSKRLRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLQA 423

Query: 301 WRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTS 360
           WRKTNIRETYHSWL+ENLKSNLTMWKLGTLPPALIAFKGHVH ID SWH+LGLGYQ+KT+
Sbjct: 424 WRKTNIRETYHSWLRENLKSNLTMWKLGTLPPALIAFKGHVHIIDSSWHMLGLGYQSKTN 483

Query: 361 IESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILE 409
           IE+VKKAAVIHYNGQSKPWL+IGFEHLRPFW KYVNYSNDF++NCHILE
Sbjct: 484 IENVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIKNCHILE 532
May be involved in pectin and/or xylans biosynthesis in cell walls.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q0WV13|GAUTD_ARATH Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana GN=GAUT13 PE=2 SV=1 Back     alignment and function description
>sp|Q9FH36|GAUTC_ARATH Probable galacturonosyltransferase 12 OS=Arabidopsis thaliana GN=GAUT12 PE=2 SV=1 Back     alignment and function description
>sp|Q8L4B0|GAUTF_ARATH Probable galacturonosyltransferase 15 OS=Arabidopsis thaliana GN=GAUT15 PE=2 SV=1 Back     alignment and function description
>sp|Q9LE59|GAUT1_ARATH Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1 Back     alignment and function description
>sp|Q93ZX7|GAUT4_ARATH Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana GN=GAUT4 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSG3|GAUT8_ARATH Galacturonosyltransferase 8 OS=Arabidopsis thaliana GN=GAUT8 PE=1 SV=1 Back     alignment and function description
>sp|Q0WQD2|GAUT3_ARATH Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana GN=GAUT3 PE=2 SV=2 Back     alignment and function description
>sp|Q949Q1|GAUTB_ARATH Probable galacturonosyltransferase 11 OS=Arabidopsis thaliana GN=GAUT11 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKT6|GAUTA_ARATH Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana GN=GAUT10 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query410
224141469 528 glycosyltransferase [Populus trichocarpa 1.0 0.776 0.917 0.0
224077712 528 glycosyltransferase, CAZy family GT8 [Po 1.0 0.776 0.902 0.0
225452954 534 PREDICTED: probable galacturonosyltransf 1.0 0.767 0.924 0.0
147819296 548 hypothetical protein VITISV_019278 [Viti 1.0 0.748 0.924 0.0
296082986 511 unnamed protein product [Vitis vinifera] 1.0 0.802 0.924 0.0
255570238 540 Glycosyltransferase QUASIMODO1, putative 1.0 0.759 0.924 0.0
356526479 538 PREDICTED: probable galacturonosyltransf 1.0 0.762 0.917 0.0
356568714 539 PREDICTED: probable galacturonosyltransf 1.0 0.760 0.914 0.0
9755802 572 putative protein [Arabidopsis thaliana] 0.997 0.715 0.899 0.0
30685369 532 alpha-1,4-galacturonosyltransferase [Ara 0.997 0.768 0.899 0.0
>gi|224141469|ref|XP_002324094.1| glycosyltransferase [Populus trichocarpa] gi|222867096|gb|EEF04227.1| glycosyltransferase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/410 (91%), Positives = 399/410 (97%)

Query: 1   MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS 60
           MKNNQYDA+TF FMLRAMMEK EREIRESKF+ELMNKHFAASSIPK IHCLSLRLTDEYS
Sbjct: 118 MKNNQYDARTFAFMLRAMMEKLEREIRESKFSELMNKHFAASSIPKSIHCLSLRLTDEYS 177

Query: 61  SNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITD 120
           SNAHAR+QLPSPE LPLLSDNSYHHF+LSTDNILAASVVVTS +QSSLKP+ IVFH+ITD
Sbjct: 178 SNAHARKQLPSPEFLPLLSDNSYHHFVLSTDNILAASVVVTSTIQSSLKPDNIVFHIITD 237

Query: 121 KKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAG 180
           KKTYAGMHSWFALNPVSPAIVEVKG+HQFDWLTRENVPVLEAVENH+GIRNYYHGNH+AG
Sbjct: 238 KKTYAGMHSWFALNPVSPAIVEVKGVHQFDWLTRENVPVLEAVENHNGIRNYYHGNHIAG 297

Query: 181 ANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240
           ANLSDTTPR FASKLQARSPKYIS+LNHLRIYIPELFP LDKVVFLDDD+VIQRDLSPLW
Sbjct: 298 ANLSDTTPRRFASKLQARSPKYISILNHLRIYIPELFPSLDKVVFLDDDVVIQRDLSPLW 357

Query: 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRA 300
           EIDL GKVNGAVETC+GEDEWVMSK F+NYFNFSHPLIAK+LDP+ECAWAYGMNIFDLRA
Sbjct: 358 EIDLKGKVNGAVETCKGEDEWVMSKHFKNYFNFSHPLIAKNLDPDECAWAYGMNIFDLRA 417

Query: 301 WRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTS 360
           WRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWH+LGLGYQNKT+
Sbjct: 418 WRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQNKTN 477

Query: 361 IESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET 410
           IESVKKAAVIHYNGQ+KPWL+IGFEHLRPFW KYVNYSNDF+RNCHIL++
Sbjct: 478 IESVKKAAVIHYNGQAKPWLEIGFEHLRPFWTKYVNYSNDFIRNCHILDS 527

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224077712|ref|XP_002305374.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi|222848338|gb|EEE85885.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225452954|ref|XP_002284273.1| PREDICTED: probable galacturonosyltransferase 13-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147819296|emb|CAN68963.1| hypothetical protein VITISV_019278 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296082986|emb|CBI22287.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255570238|ref|XP_002526079.1| Glycosyltransferase QUASIMODO1, putative [Ricinus communis] gi|223534576|gb|EEF36273.1| Glycosyltransferase QUASIMODO1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356526479|ref|XP_003531845.1| PREDICTED: probable galacturonosyltransferase 14-like [Glycine max] Back     alignment and taxonomy information
>gi|356568714|ref|XP_003552555.1| PREDICTED: probable galacturonosyltransferase 13-like [Glycine max] Back     alignment and taxonomy information
>gi|9755802|emb|CAC01746.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30685369|ref|NP_197051.2| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] gi|75151049|sp|Q8GWT1.1|GAUTE_ARATH RecName: Full=Probable galacturonosyltransferase 14 gi|26452322|dbj|BAC43247.1| unknown protein [Arabidopsis thaliana] gi|29028910|gb|AAO64834.1| At5g15470 [Arabidopsis thaliana] gi|332004782|gb|AED92165.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query410
TAIR|locus:2180947532 GAUT14 "galacturonosyltransfer 0.997 0.768 0.848 2e-198
TAIR|locus:2102082533 GAUT13 "galacturonosyltransfer 0.997 0.767 0.838 3.4e-196
TAIR|locus:2157543535 GAUT12 "galacturonosyltransfer 0.990 0.758 0.566 2.2e-130
TAIR|locus:2099049540 GAUT15 "galacturonosyltransfer 0.973 0.738 0.462 2.7e-100
TAIR|locus:2051426536 GAUT10 "galacturonosyltransfer 0.926 0.708 0.423 1.4e-87
TAIR|locus:2121753680 GAUT3 "galacturonosyltransfera 0.960 0.579 0.396 4.9e-85
TAIR|locus:2090210559 QUA1 "QUASIMODO 1" [Arabidopsi 0.856 0.627 0.444 1e-84
TAIR|locus:2039934528 GAUT2 "galacturonosyltransfera 0.317 0.246 0.484 9.5e-78
TAIR|locus:2074572561 GAUT9 "galacturonosyltransfera 0.760 0.556 0.426 7.3e-75
TAIR|locus:2098836673 GAUT1 "galacturonosyltransfera 0.524 0.319 0.513 1.5e-67
TAIR|locus:2180947 GAUT14 "galacturonosyltransferase 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1921 (681.3 bits), Expect = 2.0e-198, P = 2.0e-198
 Identities = 347/409 (84%), Positives = 375/409 (91%)

Query:     1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS 60
             MKNN YDAKTF  +LRAMMEKFER++RESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS
Sbjct:   124 MKNNHYDAKTFALVLRAMMEKFERDMRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS 183

Query:    61 SNAHARRQXXXXXXXXXXXDNSYHHFILSTDNILXXXXXXXXXXXXXLKPEKIVFHVITD 120
             SNAHARRQ           DN+YHHFILSTDNIL              KPEKIVFH+ITD
Sbjct:   184 SNAHARRQLPSPEFLPVLSDNAYHHFILSTDNILAASVVVSSAVQSSSKPEKIVFHIITD 243

Query:   121 KKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAG 180
             KKTYAGMHSWFALN V+PAIVEVKG+HQFDWLTRENVPVLEAVE+H+G+R+YYHGNHVAG
Sbjct:   244 KKTYAGMHSWFALNSVAPAIVEVKGVHQFDWLTRENVPVLEAVESHNGVRDYYHGNHVAG 303

Query:   181 ANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240
             ANL++TTPRTFASKLQ+RSPKYISLLNHLRIYIPELFP+LDKVVFLDDDIV+Q DL+PLW
Sbjct:   304 ANLTETTPRTFASKLQSRSPKYISLLNHLRIYIPELFPNLDKVVFLDDDIVVQGDLTPLW 363

Query:   241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRA 300
             ++DLGGKVNGAVETCRGEDEWVMSKR RNYFNFSHPLIAKHLDPEECAWAYGMNIFDL+A
Sbjct:   364 DVDLGGKVNGAVETCRGEDEWVMSKRLRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLQA 423

Query:   301 WRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTS 360
             WRKTNIRETYHSWL+ENLKSNLTMWKLGTLPPALIAFKGHVH ID SWH+LGLGYQ+KT+
Sbjct:   424 WRKTNIRETYHSWLRENLKSNLTMWKLGTLPPALIAFKGHVHIIDSSWHMLGLGYQSKTN 483

Query:   361 IESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILE 409
             IE+VKKAAVIHYNGQSKPWL+IGFEHLRPFW KYVNYSNDF++NCHILE
Sbjct:   484 IENVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIKNCHILE 532
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016051 "carbohydrate biosynthetic process" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA;ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS
TAIR|locus:2102082 GAUT13 "galacturonosyltransferase 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157543 GAUT12 "galacturonosyltransferase 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099049 GAUT15 "galacturonosyltransferase 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2051426 GAUT10 "galacturonosyltransferase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121753 GAUT3 "galacturonosyltransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090210 QUA1 "QUASIMODO 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039934 GAUT2 "galacturonosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074572 GAUT9 "galacturonosyltransferase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098836 GAUT1 "galacturonosyltransferase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8GWT1GAUTE_ARATH2, ., 4, ., 1, ., -0.89970.99750.7687yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query410
PLN02870533 PLN02870, PLN02870, Probable galacturonosyltransfe 0.0
PLN02659534 PLN02659, PLN02659, Probable galacturonosyltransfe 0.0
PLN02867535 PLN02867, PLN02867, Probable galacturonosyltransfe 1e-177
PLN02829639 PLN02829, PLN02829, Probable galacturonosyltransfe 1e-144
PLN02742534 PLN02742, PLN02742, Probable galacturonosyltransfe 1e-144
PLN02523559 PLN02523, PLN02523, galacturonosyltransferase 1e-134
PLN02910657 PLN02910, PLN02910, polygalacturonate 4-alpha-gala 1e-129
PLN02718603 PLN02718, PLN02718, Probable galacturonosyltransfe 1e-111
cd06429257 cd06429, GT8_like_1, GT8_like_1 represents a subfa 1e-102
PLN02769629 PLN02769, PLN02769, Probable galacturonosyltransfe 8e-89
pfam01501248 pfam01501, Glyco_transf_8, Glycosyl transferase fa 2e-64
cd04194248 cd04194, GT8_A4GalT_like, A4GalT_like proteins cat 2e-25
cd00505246 cd00505, Glyco_transf_8, Members of glycosyltransf 7e-17
COG1442325 COG1442, RfaJ, Lipopolysaccharide biosynthesis pro 1e-12
cd06432248 cd06432, GT8_HUGT1_C_like, The C-terminal domain o 6e-05
>gnl|CDD|215468 PLN02870, PLN02870, Probable galacturonosyltransferase Back     alignment and domain information 
 Score =  874 bits (2259), Expect = 0.0
 Identities = 383/410 (93%), Positives = 405/410 (98%)

Query: 1   MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS 60
           MKNN YDAKTF F+LRAMMEKFERE+RESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS
Sbjct: 124 MKNNHYDAKTFAFVLRAMMEKFERELRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYS 183

Query: 61  SNAHARRQLPSPELLPLLSDNSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITD 120
           SNAHAR+QLPSPELLP+LSDNSYHHF+LSTDNILAASVVV+S VQSSLKPEKIVFHVITD
Sbjct: 184 SNAHARKQLPSPELLPVLSDNSYHHFVLSTDNILAASVVVSSTVQSSLKPEKIVFHVITD 243

Query: 121 KKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAG 180
           KKTYAGMHSWFALN VSPAIVEVKG+HQFDWLTRENVPVLEAVE+H+GIRNYYHGNH+AG
Sbjct: 244 KKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVLEAVESHNGIRNYYHGNHIAG 303

Query: 181 ANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW 240
           ANLS+TTPRTFASKLQARSPKYISLLNHLRIY+PELFP+LDKVVFLDDD+VIQRDLSPLW
Sbjct: 304 ANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLW 363

Query: 241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRA 300
           +IDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAK+LDPEECAWAYGMNIFDLRA
Sbjct: 364 DIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDPEECAWAYGMNIFDLRA 423

Query: 301 WRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTS 360
           WRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWH+LGLGYQ+KT+
Sbjct: 424 WRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSKTN 483

Query: 361 IESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDFVRNCHILET 410
           IESVKKAAVIHYNGQSKPWL+IGFEHLRPFW KYVNYSNDF+RNCHILE+
Sbjct: 484 IESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSNDFIRNCHILES 533

Length = 533
>gnl|CDD|215356 PLN02659, PLN02659, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|178458 PLN02867, PLN02867, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215443 PLN02829, PLN02829, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215395 PLN02742, PLN02742, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215286 PLN02523, PLN02523, galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|178320 PLN02718, PLN02718, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>gnl|CDD|215412 PLN02769, PLN02769, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8 Back     alignment and domain information
>gnl|CDD|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>gnl|CDD|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>gnl|CDD|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|133054 cd06432, GT8_HUGT1_C_like, The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 410
PLN02870533 Probable galacturonosyltransferase 100.0
PLN02659534 Probable galacturonosyltransferase 100.0
PLN02829639 Probable galacturonosyltransferase 100.0
PLN02910657 polygalacturonate 4-alpha-galacturonosyltransferas 100.0
PLN02867535 Probable galacturonosyltransferase 100.0
PLN02742534 Probable galacturonosyltransferase 100.0
PLN02523559 galacturonosyltransferase 100.0
PLN02769629 Probable galacturonosyltransferase 100.0
PLN02718603 Probable galacturonosyltransferase 100.0
cd06429257 GT8_like_1 GT8_like_1 represents a subfamily of GT 100.0
PRK15171334 lipopolysaccharide 1,3-galactosyltransferase; Prov 100.0
cd06431280 GT8_LARGE_C LARGE catalytic domain has closest hom 100.0
cd00505246 Glyco_transf_8 Members of glycosyltransferase fami 100.0
COG1442325 RfaJ Lipopolysaccharide biosynthesis proteins, LPS 100.0
cd04194248 GT8_A4GalT_like A4GalT_like proteins catalyze the 100.0
PF01501250 Glyco_transf_8: Glycosyl transferase family 8; Int 100.0
cd06430304 GT8_like_2 GT8_like_2 represents a subfamily of GT 100.0
cd06432248 GT8_HUGT1_C_like The C-terminal domain of HUGT1-li 100.0
cd02537240 GT8_Glycogenin Glycogenin belongs the GT 8 family 99.95
PLN00176333 galactinol synthase 99.94
cd06914278 GT8_GNT1 GNT1 is a fungal enzyme that belongs to t 99.83
KOG18791470 consensus UDP-glucose:glycoprotein glucosyltransfe 99.31
COG5597368 Alpha-N-acetylglucosamine transferase [Cell envelo 97.97
PF03407212 Nucleotid_trans: Nucleotide-diphospho-sugar transf 96.34
PLN03182429 xyloglucan 6-xylosyltransferase; Provisional 91.69
PF05637239 Glyco_transf_34: galactosyl transferase GMA12/MNN1 90.83
PF11051271 Mannosyl_trans3: Mannosyltransferase putative; Int 88.04
>PLN02870 Probable galacturonosyltransferase Back     alignment and domain information 
Probab=100.00  E-value=2.5e-117  Score=896.68  Aligned_cols=410  Identities=93%  Similarity=1.503  Sum_probs=381.7

Q ss_pred             CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccccccHHHhhChhhhccCCCCCccCCCCC
Q 015279            1 MKNNQYDAKTFGFMLRAMMEKFEREIRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARRQLPSPELLPLLSD   80 (410)
Q Consensus         1 ~~~~~~~~~~~~~~l~~~~~~~e~~~~~~~~~~~~~~~la~~~~pk~~hcl~~rl~~e~~~~~~~~~~~~~~~~~~~~~d   80 (410)
                      ||+.+|||+++++|||||++++|||++++|+|++|++||||+|+|||||||+||||+|||+++.+++++|++|..|+|+|
T Consensus       124 ~~~~~~d~~~~~~kl~~~~~~~e~~~~~~~~~~~~~~~laa~t~PK~lHCL~mrLt~ey~~~~~~~~~~~~~e~~~~l~d  203 (533)
T PLN02870        124 MKNNHYDAKTFAFVLRAMMEKFERELRESKFAELMNKHFAASSIPKGIHCLSLRLTDEYSSNAHARKQLPSPELLPVLSD  203 (533)
T ss_pred             HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccchhhHHHHHhCchhhhcCCcccccccccC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999998999999


Q ss_pred             CCccEEEEEeCCCcchhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279           81 NSYHHFILSTDNILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL  160 (410)
Q Consensus        81 ~~~ihIv~~sDn~l~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l  160 (410)
                      |+++|+|++|||+||+||||+|++.|+++|+++|||||||++|+.+|++||++||+++|+|||+++|+|+||+.+++|+|
T Consensus       204 p~~~Hy~ifSdNvLAasVvvnStv~~a~~p~~~VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~~~pvl  283 (533)
T PLN02870        204 NSYHHFVLSTDNILAASVVVSSTVQSSLKPEKIVFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRENVPVL  283 (533)
T ss_pred             CcceeEEEEecceeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEehhhccccccccchHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhh
Q 015279          161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLW  240 (410)
Q Consensus       161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~  240 (410)
                      +|+|+..+++.+|+.+........+.+|.++.++++.++|+|+|+++|+||+||++||+++||||||+||||++||++||
T Consensus       284 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw  363 (533)
T PLN02870        284 EAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLW  363 (533)
T ss_pred             HHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHh
Confidence            99999999998887643322222233556677889999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccC
Q 015279          241 EIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS  320 (410)
Q Consensus       241 ~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~  320 (410)
                      ++||+|+++|||+||.....+...++++.|+||++|.+..+|+++.||||||||||||++||++++++++++|++++.++
T Consensus       364 ~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~  443 (533)
T PLN02870        364 DIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKS  443 (533)
T ss_pred             hCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhc
Confidence            99999999999999965433333456778999999999999999999999999999999999999999999999987655


Q ss_pred             CccccCcCCCcHHHHhccCCeeecCCcccccccCCCCccchhhhCCceEEEeeCCCCCCccCCCCCCHHHHHHHHhhchh
Q 015279          321 NLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQNKTSIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSND  400 (410)
Q Consensus       321 ~~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G~~KPW~~~~~~~~~~~W~~Y~~~~~~  400 (410)
                      ++.++|||+||++|++|+|++++||++||++++||+.....+.+++|+||||+|++|||++.++++|+.+|.+|++++++
T Consensus       444 ~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~~~~~~i~~aaIIHY~G~~KPW~~~~~~~yr~~W~kYl~~s~~  523 (533)
T PLN02870        444 NLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSKTNIESVKKAAVIHYNGQSKPWLEIGFEHLRPFWTKYVNYSND  523 (533)
T ss_pred             CceecccccccHhHHHhcCceEECChHHhcCCCCCcccccccccCCcEEEEECCCCCCccccCccchhHHHHHHHccCch
Confidence            68899999999999999999999999999999999876556778899999999999999999999999999999999999


Q ss_pred             hhhcccccCC
Q 015279          401 FVRNCHILET  410 (410)
Q Consensus       401 ~l~~c~~~~~  410 (410)
                      |||+|||+|+
T Consensus       524 fl~~Cni~~~  533 (533)
T PLN02870        524 FIRNCHILES  533 (533)
T ss_pred             HhhhcCCCCC
Confidence            9999999985

>PLN02659 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02829 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>PLN02867 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02742 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02523 galacturonosyltransferase Back     alignment and domain information
>PLN02769 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02718 Probable galacturonosyltransferase Back     alignment and domain information
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional Back     alignment and domain information
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>PLN00176 galactinol synthase Back     alignment and domain information
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family Back     alignment and domain information
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [] Back     alignment and domain information
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional Back     alignment and domain information
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif Back     alignment and domain information
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query410
1ss9_A311 Crystal Structural Analysis Of Active Site Mutant Q 8e-08
1g9r_A311 Crystal Structure Of Galactosyltransferase Lgtc In 1e-07
>pdb|1SS9|A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc Length = 311 Back     alignment and structure 
Iteration: 1

 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 47/223 (21%)
Query: 179 AGANLS--DTTPRTFAS-KLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRD 235
            G N+   D  P  FA   L  R   +IS+  + R+ + E     DKV++LD D++++  
Sbjct: 55  GGGNIRFIDVNPEDFAGFPLNIR---HISITTYARLKLGEYIADCDKVLYLDIDVLVRDS 111
Query: 236 LSPLWEIDLGGKVNGA-----VETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWA 290
           L+PLW+ DLG    GA     VE   G  + +       YFN                  
Sbjct: 112 LTPLWDTDLGDNWLGACIDLFVERQEGYKQKIGMADGEYYFN------------------ 153
Query: 291 YGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHL 350
            G+ + +L+ WR+ +I +    W+++    ++  ++   +   L  FKG V   +  ++ 
Sbjct: 154 AGVLLINLKKWRRHDIFKMSCEWVEQ--YKDVMQYQDEDILNGL--FKGGVCYANSRFNF 209
Query: 351 LGLGYQ--------------NKTSIESVKKAAVIHYNGQSKPW 379
           +   Y                +    +V   AV HY G +KPW
Sbjct: 210 MPTNYAFMANRFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPW 252
>pdb|1G9R|A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose Length = 311 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query410
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 1e-53
3tzt_A276 Glycosyl transferase family 8; structural genomics 3e-29
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311 Back     alignment and structure
 Score =  179 bits (457), Expect = 1e-53
 Identities = 51/333 (15%), Positives = 108/333 (32%), Gaps = 76/333 (22%)

Query: 85  HFILSTDN--ILAASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVE 142
             + + D+       V   S   +     +I FHV+    + A   +  A        + 
Sbjct: 2   DIVFAADDNYAAYLCVAAKSVEAAH-PDTEIRFHVLDAGISEANRAAVAANLRGGGGNIR 60

Query: 143 VKGIHQFDWLTRENVPVLEAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKY 202
                  +       P+                                       + ++
Sbjct: 61  ---FIDVNPEDFAGFPL---------------------------------------NIRH 78

Query: 203 ISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVETCRGEDEWV 262
           IS+  + R+ + E     DKV++LD D++++  L+PLW+ DLG    GA      +    
Sbjct: 79  ISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASI----DLFVE 134

Query: 263 MSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNL 322
             + ++     +           E  +  G+ + +L+ WR+ +I +    W+++    ++
Sbjct: 135 RQEGYKQKIGMADG---------EYYFNAGVLLINLKKWRRHDIFKMSSEWVEQY--KDV 183

Query: 323 TMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQN--------------KTSIESVKKAA 368
             ++   +   L  FKG V   +  ++ +   Y                +    +V   A
Sbjct: 184 MQYQDQDILNGL--FKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVA 241

Query: 369 VIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDF 401
           V HY G +KPW +         + +        
Sbjct: 242 VSHYCGPAKPWHRDCTAWGAERFTELAGSLTTV 274
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query410
3tzt_A276 Glycosyl transferase family 8; structural genomics 100.0
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 100.0
1ll2_A333 Glycogenin-1; protein-substrate complex, beta-alph 99.95
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 99.94
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0 Back     alignment and structure
Probab=100.00  E-value=1.1e-48  Score=378.85  Aligned_cols=257  Identities=15%  Similarity=0.224  Sum_probs=183.1

Q ss_pred             ccEEEEEeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhH
Q 015279           83 YHHFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVL  160 (410)
Q Consensus        83 ~ihIv~~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l  160 (410)
                      .||||+++|+.|  +++|+|+|++.|+++ ++++|||++++++.+..+....+-+..+..|++..+              
T Consensus         5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~--------------   69 (276)
T 3tzt_A            5 ADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRA--------------   69 (276)
T ss_dssp             CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEEC--------------
T ss_pred             eEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEe--------------
Confidence            489999999988  799999999999985 679999999999877644322110001112221111              


Q ss_pred             HhhhhccceeeeecCCcccccccCCCCchhhhhhhccC-CCCCcchhhHHHHhhcccCC-CCCeEEEEecceeeccCChh
Q 015279          161 EAVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQAR-SPKYISLLNHLRIYIPELFP-HLDKVVFLDDDIVIQRDLSP  238 (410)
Q Consensus       161 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~s~~~y~R~~lp~llp-~~~KvLYLD~DvIV~~DL~e  238 (410)
                                                +++    .++.. ..+++|..+|+||++|+++| +++||||||+|+||++||++
T Consensus        70 --------------------------~~~----~~~~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~  119 (276)
T 3tzt_A           70 --------------------------TDD----LFSFAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDD  119 (276)
T ss_dssp             --------------------------C-----------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHH
T ss_pred             --------------------------CHH----HHhcCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHH
Confidence                                      000    11111 23578999999999999999 59999999999999999999


Q ss_pred             hhhcCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhc
Q 015279          239 LWEIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENL  318 (410)
Q Consensus       239 L~~~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~  318 (410)
                      ||++|++|+++|||+||.....       .+.++      ..+++...+|||||||||||++||+.+++++++++++++.
T Consensus       120 L~~~dl~~~~~aav~d~~~~~~-------~~~~~------~~~l~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~  186 (276)
T 3tzt_A          120 LLRTDISDYILAAASHTGKTDM-------ANNVN------RIRLGTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNH  186 (276)
T ss_dssp             HHTCCCTTSSEEEEEC---------------------------------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC-
T ss_pred             HhhcCCCCCeEEEEEecccchH-------HHHHH------HhcCCCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhcc
Confidence            9999999999999999975311       11111      1234444699999999999999999999999999999864


Q ss_pred             cCCccccCcCCCcHHHHhccCCeeecCC-cccccccCCCC--------ccch-hhhCCceEEEeeCCCCCCccCCCCCCH
Q 015279          319 KSNLTMWKLGTLPPALIAFKGHVHPIDP-SWHLLGLGYQN--------KTSI-ESVKKAAVIHYNGQSKPWLQIGFEHLR  388 (410)
Q Consensus       319 ~~~~~~~dqd~L~~~n~~f~~~~~~L~~-~wN~~~l~~~~--------~~~~-~~~~~~~IIHy~G~~KPW~~~~~~~~~  388 (410)
                       ..+.++|||+|   |.+|+++++.||. +||+++. +..        ..+. +..++|+||||+|..|||...+.++++
T Consensus       187 -~~~~~~DQd~L---N~~f~~~~~~Lp~~~wN~~~~-~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~~~~  261 (276)
T 3tzt_A          187 -MNLLLPDQDIL---NAMYGDRIYPLDDLIYNYDAR-NYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHRNKFT  261 (276)
T ss_dssp             --------CHHH---HHHHGGGEEEEEHHHHSEETT-CHHHHHHHTTTCCSHHHHHHHCCEEECCSSCCTTSTTCCSTTH
T ss_pred             -ccccCCChhHH---HHHHhCCEEECCchheeeecc-cchhhhccccchhhhhhhccCCeEEEECCCCCCcCCCCCCchH
Confidence             35678999999   8999999999999 9999862 210        1112 356789999999999999999889999


Q ss_pred             HHHHHHHhhchhhh
Q 015279          389 PFWAKYVNYSNDFV  402 (410)
Q Consensus       389 ~~W~~Y~~~~~~~l  402 (410)
                      ++||+|++..+++|
T Consensus       262 ~~w~~Y~~~~~~~~  275 (276)
T 3tzt_A          262 SLYKHYMSLTKRYL  275 (276)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999987
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Back     alignment and structure
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* Back     alignment and structure
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 410
d1ga8a_282 c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri 5e-25
d1ll2a_263 c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun 4e-04
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  101 bits (252), Expect = 5e-25
 Identities = 42/222 (18%), Positives = 84/222 (37%), Gaps = 31/222 (13%)

Query: 194 KLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWEIDLGGKVNGAVE 253
                + ++IS+  + R+ + E     DKV++LD D++++  L+PLW+ DLG    GA  
Sbjct: 70  AGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASI 129

Query: 254 TCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSW 313
               +      + ++     +           E  +  G+ + +L+ WR+ +I +    W
Sbjct: 130 ----DLFVERQEGYKQKIGMADG---------EYYFNAGVLLINLKKWRRHDIFKMSSEW 176

Query: 314 LKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQN--------------KT 359
           +++  K  +       L      FKG V   +  ++ +   Y                + 
Sbjct: 177 VEQY-KDVMQYQDQDILN---GLFKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRD 232

Query: 360 SIESVKKAAVIHYNGQSKPWLQIGFEHLRPFWAKYVNYSNDF 401
              +V   AV HY G +KPW +         + +        
Sbjct: 233 RTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTV 274
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query410
d1ga8a_282 Galactosyltransferase LgtC {Neisseria meningitidis 100.0
d1ll2a_263 Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 99.94
d1o7qa_287 alpha-1,3-galactosyltransferase catalytic domain { 92.45
d1lzia_283 Glycosyltransferase A catalytic domain {Human (Hom 86.72
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=8.5e-45  Score=348.93  Aligned_cols=254  Identities=21%  Similarity=0.328  Sum_probs=193.5

Q ss_pred             cEEEEEeCCCc--chhhhHHHHHhhcCCCCcEEEEEEeCCCChhhhhhhhhcCCCCCceeEEecccccccccccchhhHH
Q 015279           84 HHFILSTDNIL--AASVVVTSAVQSSLKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLE  161 (410)
Q Consensus        84 ihIv~~sDn~l--~~~V~I~Sil~n~~~~~~~~fhIltd~~~~~~~~~wf~~~~~~~a~v~v~~i~~f~~l~~~~~~~l~  161 (410)
                      ||||+++|++|  +++|+|+|++.|+++ .+++|||++++++.+..+.....-...+..|                    
T Consensus         1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i--------------------   59 (282)
T d1ga8a_           1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAANLRGGGGNI--------------------   59 (282)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHTSGGGTTTE--------------------
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCHHHHHHHHHHHHHcCCeE--------------------
Confidence            69999999987  689999999998874 6799999999999876543222110001111                    


Q ss_pred             hhhhccceeeeecCCcccccccCCCCchhhhhhhccCCCCCcchhhHHHHhhcccCCCCCeEEEEecceeeccCChhhhh
Q 015279          162 AVENHDGIRNYYHGNHVAGANLSDTTPRTFASKLQARSPKYISLLNHLRIYIPELFPHLDKVVFLDDDIVIQRDLSPLWE  241 (410)
Q Consensus       162 ~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~y~R~~lp~llp~~~KvLYLD~DvIV~~DL~eL~~  241 (410)
                                .+..          +++..+...  ....+++|.++|+||++|++||+++||||||+||||++||++||+
T Consensus        60 ----------~~~~----------~~~~~~~~~--~~~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~dl~~L~~  117 (282)
T d1ga8a_          60 ----------RFID----------VNPEDFAGF--PLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWD  117 (282)
T ss_dssp             ----------EEEE----------CCGGGGTTS--CCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHT
T ss_pred             ----------EEEE----------CCchHhccc--cccccccCHHHHHHHHHhhhCCccceEEEecCCEEEecchHHHHh
Confidence                      1100          010001100  112468899999999999999999999999999999999999999


Q ss_pred             cCCCCCcceeeecccCCchhhhhhhhhcccCCCchhhhccCCCCCCCceeeEEEEechHHhhhcHHHHHHHHHHHhccCC
Q 015279          242 IDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKHLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSN  321 (410)
Q Consensus       242 ~dl~g~~iaAv~d~~~~~~~~~~~~~~~~l~~s~p~i~~~~~~~~~yfNsGVllinL~~wR~~~i~~~~~~~~~~~~~~~  321 (410)
                      +|++++.+|||.|+.....    ......         .++.+..+||||||||||+++||+++++++++++++++. ..
T Consensus       118 ~~~~~~~~aa~~d~~~~~~----~~~~~~---------~~~~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~-~~  183 (282)
T d1ga8a_         118 TDLGDNWLGASIDLFVERQ----EGYKQK---------IGMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYK-DV  183 (282)
T ss_dssp             CCCTTCSEEEEECHHHHTS----TTHHHH---------TTCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHT-TT
T ss_pred             cccccceeeeehhhhhhhh----hhhHHH---------hCCCCCCceeecceeeechhhhhhhhHHHHHHHHHHhcc-cC
Confidence            9999999999998753210    111122         235567899999999999999999999999999999875 46


Q ss_pred             ccccCcCCCcHHHHhccCCeeecCCcccccccCCCC---------cc----c-hhhhCCceEEEeeCCCCCCccCCCCCC
Q 015279          322 LTMWKLGTLPPALIAFKGHVHPIDPSWHLLGLGYQN---------KT----S-IESVKKAAVIHYNGQSKPWLQIGFEHL  387 (410)
Q Consensus       322 ~~~~dqd~L~~~n~~f~~~~~~L~~~wN~~~l~~~~---------~~----~-~~~~~~~~IIHy~G~~KPW~~~~~~~~  387 (410)
                      ..++|||+|   |.+|.|++..||.+||++..+|..         ..    + .+...+++||||+|+.|||...+.+.+
T Consensus       184 ~~~~DQd~L---N~~f~~~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~~~  260 (282)
T d1ga8a_         184 MQYQDQDIL---NGLFKGGVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWG  260 (282)
T ss_dssp             CSSTHHHHH---HHHHTTSEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCSTT
T ss_pred             cccCchhHH---HHHhcCCEEeCCHHHeeccccccccccccccccchhhhhhhhhccCCCEEEeeCCCCCCCCCCCCChh
Confidence            778999999   899999999999999987542211         00    1 234568999999999999998888889


Q ss_pred             HHHHHHHHhh
Q 015279          388 RPFWAKYVNY  397 (410)
Q Consensus       388 ~~~W~~Y~~~  397 (410)
                      .+.|++|...
T Consensus       261 ~~~~~~~~~~  270 (282)
T d1ga8a_         261 AERFTELAGS  270 (282)
T ss_dssp             THHHHHHHTT
T ss_pred             HHHHHHHHHh
Confidence            9999999864
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure