Citrus Sinensis ID: 015364

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------41
MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATLDHKGPDLDPEEIPIDDEDELEELDE
cEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccHHHHHcccccccccccccccEEEEEEccccccHHHHHHHHcccEEEccEEEEccccEEEEccEEEEEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEccccccccccccHHHHHHHccccHHcccccccccHHHHHHHHHHcccEEEEccccccccEEEcccccccccEEEcccccccccccEEEEEcccccccccccccHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHcccc
cEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEEccHHHEccHHHHHHccccHHHHHHccHHHHccccccccEEEEEEccccHHHHHHHHccccccccccEEEEccccEEEEccEEEEEEcccEcccccccccccccccccccEEEEEEEEEcEHHHHHHccccccEEEEccccccccccccHHHHHHHcHHHHHHHHccccccHHHHHHHHHccccHHHHHHEEEEEEEEcccccccccEEEEEHccccccccEEEEEEcccccccccEcccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHcccccccccEEccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccccccccHHHHccc
mriavegcmhgeldNVYKTLQYMENINSYKIDLLLCCGdfqavrnendmeslnvprkyREMKSFWKYysgqevapiptifiggnheaSNYLWELyyggwaapniYFLGFAGVvkfgnirigglsgiynarhyrlghyerppynestirsvyhvreydvhklmqieepidiflshdwpcgitdygnckelvRHKQYFEKeiqdgtlgsePAAQLLEKLkpsywfsahLHCKFAAVvqhgedspvtkflaldkclprrkfLQVFEiesgqgpyeiqyDEEWLAITRTFNsvfpltsqsanfggvqhdmndCRQWVRSRLqergakpfefvrtvpcydasqslsigafaenpqnpqtesFLQFLelpnlfenalesreptqspatldhkgpdldpeeipiddedeleelde
mriavegcmhgeLDNVYKTLQYMENINSYKIDLLLCCGDFQAVrnendmeslnvprKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHyerppynestiRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFeiesgqgpyEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTqspatldhkgpdldpeeipiddedeleelde
MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATLDHKGpdldpeeipiddedeleelde
***AVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAF***********FLQFLELPNLF*****************************************
MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQH********************FLQVFEIESGQGPYEIQYDEEWLAITRTFNSV*****************NDCRQWVRSRLQERGAKPFEFVRTVPC**************NPQNPQTESFLQFLELPNLF*****************************************
MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENAL***********LDHKGPDLDPEEIPIDDEDELEELDE
MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALES***********************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLELPNLFENALESREPTQSPATLDHKGPDLDPEEIPIDDEDELEELDE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query408 2.2.26 [Sep-21-2011]
Q94K01418 Lariat debranching enzyme yes no 0.933 0.911 0.725 1e-163
Q6AU07407 Lariat debranching enzyme yes no 0.875 0.877 0.719 1e-153
Q6P886 534 Lariat debranching enzyme yes no 0.968 0.739 0.492 1e-111
Q6GPB8 534 Lariat debranching enzyme N/A no 0.872 0.666 0.518 1e-110
Q7T3E4 568 Lariat debranching enzyme yes no 0.882 0.633 0.511 1e-109
Q7ZWU9 533 Lariat debranching enzyme N/A no 0.973 0.744 0.489 1e-108
Q9UK59 544 Lariat debranching enzyme yes no 0.906 0.680 0.496 1e-106
Q923B1 550 Lariat debranching enzyme yes no 0.906 0.672 0.491 1e-105
Q5ZLM2536 Lariat debranching enzyme yes no 0.992 0.755 0.445 1e-103
Q9VSD7534 Lariat debranching enzyme yes no 0.872 0.666 0.452 1e-100
>sp|Q94K01|DBR1_ARATH Lariat debranching enzyme OS=Arabidopsis thaliana GN=DBR1 PE=2 SV=1 Back     alignment and function desciption
 Score =  575 bits (1481), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/383 (72%), Positives = 319/383 (83%), Gaps = 2/383 (0%)

Query: 1   MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYRE 60
           M+IA+EGCMHG+LDNVYKT+Q+ E I++ K+DLLLCCGDFQAVRNE DM+SLNVPRKYRE
Sbjct: 1   MKIAIEGCMHGDLDNVYKTIQHYEQIHNTKVDLLLCCGDFQAVRNEKDMDSLNVPRKYRE 60

Query: 61  MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI 120
           MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAA NIYFLGFAGVVKFGN+RI
Sbjct: 61  MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAATNIYFLGFAGVVKFGNVRI 120

Query: 121 GGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGI 180
           GGLSGIYN RHYR GH+ERPPYNESTIRSVYHVR+YDV KLMQ+EEP+DIFLSHDWP GI
Sbjct: 121 GGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQLEEPLDIFLSHDWPVGI 180

Query: 181 TDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240
           TDYG+ + L+R K YF +EI++ TLGS+PAA LLEKLKP YWFSAHLHCKFAA VQHG D
Sbjct: 181 TDYGDSESLMRQKPYFRQEIEEKTLGSKPAALLLEKLKPQYWFSAHLHCKFAAAVQHGND 240

Query: 241 SPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFG 300
             VTKFLALDKCLP +KFLQ+ EIES  GP+E+ YDEEWLAITR FNS+FPLT +  N  
Sbjct: 241 GSVTKFLALDKCLPGKKFLQIIEIESEPGPFEVLYDEEWLAITRKFNSIFPLTRRYTNV- 299

Query: 301 GVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQF 360
                + + R+WVR +L+ER  KPFEF RTVP Y+ SQ +   +  E PQNPQT S L+ 
Sbjct: 300 STAGTIQESREWVRKKLEERQFKPFEFARTVPAYNPSQRV-FDSIPEIPQNPQTLSLLEL 358

Query: 361 LELPNLFENALESREPTQSPATL 383
           L LP L +++  + E T  PA+L
Sbjct: 359 LGLPYLLDSSPVTGERTDIPASL 381
Cleaves the 2'-5' phosphodiester linkage at the branch point of lariat intron pre-mRNAs after splicing and converts them into linear molecules that are subsequently degraded. It thereby facilitates ribonucleotide turnover. It may also participate in retrovirus replication via a RNA lariat intermediate in cDNA synthesis. Plays en essential role during embryogenesis.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: -EC: .EC: -
>sp|Q6AU07|DBR1_ORYSJ Lariat debranching enzyme OS=Oryza sativa subsp. japonica GN=DBR1 PE=2 SV=1 Back     alignment and function description
>sp|Q6P886|DBR1_XENTR Lariat debranching enzyme OS=Xenopus tropicalis GN=dbr1 PE=2 SV=1 Back     alignment and function description
>sp|Q6GPB8|DBR1A_XENLA Lariat debranching enzyme A OS=Xenopus laevis GN=dbr1-a PE=2 SV=1 Back     alignment and function description
>sp|Q7T3E4|DBR1_DANRE Lariat debranching enzyme OS=Danio rerio GN=dbr1 PE=1 SV=1 Back     alignment and function description
>sp|Q7ZWU9|DBR1B_XENLA Lariat debranching enzyme B OS=Xenopus laevis GN=dbr1-b PE=2 SV=1 Back     alignment and function description
>sp|Q9UK59|DBR1_HUMAN Lariat debranching enzyme OS=Homo sapiens GN=DBR1 PE=1 SV=2 Back     alignment and function description
>sp|Q923B1|DBR1_MOUSE Lariat debranching enzyme OS=Mus musculus GN=Dbr1 PE=1 SV=2 Back     alignment and function description
>sp|Q5ZLM2|DBR1_CHICK Lariat debranching enzyme OS=Gallus gallus GN=DBR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9VSD7|DBR1_DROME Lariat debranching enzyme OS=Drosophila melanogaster GN=ldbr PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query408
359492991415 PREDICTED: lariat debranching enzyme [Vi 0.995 0.978 0.786 0.0
302142122407 unnamed protein product [Vitis vinifera] 0.948 0.950 0.798 0.0
255548668 760 RNA lariat debranching enzyme, putative 1.0 0.536 0.760 0.0
449493293413 PREDICTED: lariat debranching enzyme-lik 0.914 0.903 0.774 1e-176
449441840413 PREDICTED: lariat debranching enzyme-lik 0.914 0.903 0.774 1e-175
224143367434 predicted protein [Populus trichocarpa] 1.0 0.940 0.724 1e-174
18417871418 Lariat debranching enzyme [Arabidopsis t 0.933 0.911 0.725 1e-161
297798790418 hypothetical protein ARALYDRAFT_913289 [ 0.931 0.909 0.722 1e-160
357465981412 Lariat debranching enzyme [Medicago trun 0.867 0.859 0.751 1e-159
357115407406 PREDICTED: lariat debranching enzyme-lik 0.906 0.911 0.705 1e-157
>gi|359492991|ref|XP_002283617.2| PREDICTED: lariat debranching enzyme [Vitis vinifera] Back     alignment and taxonomy information
 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/408 (78%), Positives = 350/408 (85%), Gaps = 2/408 (0%)

Query: 1   MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYRE 60
           MRIAVEGCMHG+LDNVY TL+Y+E + + KIDLL+CCGDFQAVRN+ D+ESLNVP KYR 
Sbjct: 1   MRIAVEGCMHGDLDNVYSTLRYLEEVENTKIDLLICCGDFQAVRNKKDLESLNVPPKYRS 60

Query: 61  MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI 120
           M SFWKYYSGQEVAP PTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI
Sbjct: 61  MNSFWKYYSGQEVAPFPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI 120

Query: 121 GGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGI 180
           GGLSGIYN RHY LGHYERPPYNE  IRSVYHVREYDVHKLMQ+EEPIDIFLSHDWPCGI
Sbjct: 121 GGLSGIYNERHYHLGHYERPPYNERDIRSVYHVREYDVHKLMQVEEPIDIFLSHDWPCGI 180

Query: 181 TDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240
           TD+GN KELVR+K +FEKEIQ+ TLGS+ AA+LLEKLKPSYWFSAHLHCKFAA+VQHGE 
Sbjct: 181 TDHGNWKELVRYKPFFEKEIQERTLGSKAAAELLEKLKPSYWFSAHLHCKFAALVQHGEV 240

Query: 241 SPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFG 300
             VTKFLALDKCLP RKFLQ+ EIE+  GPYEIQYDEEWLAITR FNS+FPLT   AN G
Sbjct: 241 GQVTKFLALDKCLPGRKFLQIVEIETVPGPYEIQYDEEWLAITRKFNSIFPLTIHRANLG 300

Query: 301 GVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQF 360
           G Q DM DCR WVRSRL  RGAKPFEFV+TVPCYD SQS S   F+   +NPQTE  LQF
Sbjct: 301 GAQVDMQDCRDWVRSRLLTRGAKPFEFVQTVPCYDPSQSASNSCFSGYHRNPQTELLLQF 360

Query: 361 LELPNLFENALESREPTQSPATLDHKGPDLDPEEIPIDDEDELEELDE 408
           LELP L +N LESR+PT SP +L  +  D + E+IPIDD DE+EEL E
Sbjct: 361 LELPYLLDNTLESRDPTHSPMSLISR-EDYN-EDIPIDDMDEMEELAE 406

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302142122|emb|CBI19325.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255548668|ref|XP_002515390.1| RNA lariat debranching enzyme, putative [Ricinus communis] gi|223545334|gb|EEF46839.1| RNA lariat debranching enzyme, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449493293|ref|XP_004159246.1| PREDICTED: lariat debranching enzyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449441840|ref|XP_004138690.1| PREDICTED: lariat debranching enzyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224143367|ref|XP_002324932.1| predicted protein [Populus trichocarpa] gi|222866366|gb|EEF03497.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|18417871|ref|NP_567881.1| Lariat debranching enzyme [Arabidopsis thaliana] gi|75250263|sp|Q94K01.1|DBR1_ARATH RecName: Full=Lariat debranching enzyme; Short=AtDBR1 gi|13877597|gb|AAK43876.1|AF370499_1 RNA lariat debranching enzyme - like protein [Arabidopsis thaliana] gi|114213511|gb|ABI54338.1| At4g31770 [Arabidopsis thaliana] gi|332660555|gb|AEE85955.1| Lariat debranching enzyme [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297798790|ref|XP_002867279.1| hypothetical protein ARALYDRAFT_913289 [Arabidopsis lyrata subsp. lyrata] gi|297313115|gb|EFH43538.1| hypothetical protein ARALYDRAFT_913289 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357465981|ref|XP_003603275.1| Lariat debranching enzyme [Medicago truncatula] gi|355492323|gb|AES73526.1| Lariat debranching enzyme [Medicago truncatula] Back     alignment and taxonomy information
>gi|357115407|ref|XP_003559480.1| PREDICTED: lariat debranching enzyme-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query408
TAIR|locus:2124829418 DBR1 "AT4G31770" [Arabidopsis 0.933 0.911 0.725 6.3e-156
UNIPROTKB|Q6P886 534 dbr1 "Lariat debranching enzym 0.943 0.720 0.5 4.1e-104
UNIPROTKB|Q6GPB8 534 dbr1-a "Lariat debranching enz 0.894 0.683 0.522 2.9e-103
UNIPROTKB|Q7ZWU9 533 dbr1-b "Lariat debranching enz 0.916 0.701 0.503 6.9e-102
ZFIN|ZDB-GENE-030131-2466 568 dbr1 "debranching enzyme homol 0.882 0.633 0.509 4.9e-101
UNIPROTKB|E2QXS5 544 DBR1 "Uncharacterized protein" 0.850 0.637 0.530 4.4e-100
UNIPROTKB|Q9UK59 544 DBR1 "Lariat debranching enzym 0.916 0.687 0.503 1.9e-99
UNIPROTKB|A5PJS3 544 DBR1 "Uncharacterized protein" 0.916 0.687 0.493 5e-99
MGI|MGI:1931520 550 Dbr1 "debranching enzyme homol 0.916 0.68 0.501 2.8e-98
UNIPROTKB|Q5ZLM2 536 DBR1 "Lariat debranching enzym 0.916 0.697 0.485 1.2e-97
TAIR|locus:2124829 DBR1 "AT4G31770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1520 (540.1 bits), Expect = 6.3e-156, P = 6.3e-156
 Identities = 278/383 (72%), Positives = 319/383 (83%)

Query:     1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYRE 60
             M+IA+EGCMHG+LDNVYKT+Q+ E I++ K+DLLLCCGDFQAVRNE DM+SLNVPRKYRE
Sbjct:     1 MKIAIEGCMHGDLDNVYKTIQHYEQIHNTKVDLLLCCGDFQAVRNEKDMDSLNVPRKYRE 60

Query:    61 MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI 120
             MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAA NIYFLGFAGVVKFGN+RI
Sbjct:    61 MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAATNIYFLGFAGVVKFGNVRI 120

Query:   121 GGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGI 180
             GGLSGIYN RHYR GH+ERPPYNESTIRSVYHVR+YDV KLMQ+EEP+DIFLSHDWP GI
Sbjct:   121 GGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQLEEPLDIFLSHDWPVGI 180

Query:   181 TDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED 240
             TDYG+ + L+R K YF +EI++ TLGS+PAA LLEKLKP YWFSAHLHCKFAA VQHG D
Sbjct:   181 TDYGDSESLMRQKPYFRQEIEEKTLGSKPAALLLEKLKPQYWFSAHLHCKFAAAVQHGND 240

Query:   241 SPVTKFLALDKCLPRRKFLQVFEIESGQGPYEIQYDEEWLAITRTFNSVFPLTSQSANFG 300
               VTKFLALDKCLP +KFLQ+ EIES  GP+E+ YDEEWLAITR FNS+FPLT +  N  
Sbjct:   241 GSVTKFLALDKCLPGKKFLQIIEIESEPGPFEVLYDEEWLAITRKFNSIFPLTRRYTNVS 300

Query:   301 GVQHDMNDCRQWVRSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQF 360
                  + + R+WVR +L+ER  KPFEF RTVP Y+ SQ +   +  E PQNPQT S L+ 
Sbjct:   301 -TAGTIQESREWVRKKLEERQFKPFEFARTVPAYNPSQRV-FDSIPEIPQNPQTLSLLEL 358

Query:   361 LELPNLFENALESREPTQSPATL 383
             L LP L +++  + E T  PA+L
Sbjct:   359 LGLPYLLDSSPVTGERTDIPASL 381
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006397 "mRNA processing" evidence=IEA
GO:0016787 "hydrolase activity" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0008419 "RNA lariat debranching enzyme activity" evidence=IDA
GO:0009790 "embryo development" evidence=IMP
UNIPROTKB|Q6P886 dbr1 "Lariat debranching enzyme" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|Q6GPB8 dbr1-a "Lariat debranching enzyme A" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
UNIPROTKB|Q7ZWU9 dbr1-b "Lariat debranching enzyme B" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-2466 dbr1 "debranching enzyme homolog 1 (S. cerevisiae)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2QXS5 DBR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UK59 DBR1 "Lariat debranching enzyme" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A5PJS3 DBR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1931520 Dbr1 "debranching enzyme homolog 1 (S. cerevisiae)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZLM2 DBR1 "Lariat debranching enzyme" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7T3E4DBR1_DANRE3, ., 1, ., -, ., -0.51180.88230.6338yesno
Q6AU07DBR1_ORYSJ3, ., 1, ., -, ., -0.71980.8750.8771yesno
Q94K01DBR1_ARATH3, ., 1, ., -, ., -0.72580.93380.9114yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00015037001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (408 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00020651001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (263 aa)
   •  • 0.517
GSVIVG00007719001
SubName- Full=Chromosome chr3 scaffold_199, whole genome shotgun sequence; (387 aa)
   •    0.476
GSVIVG00018636001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (144 aa)
   •• • 0.414
GSVIVG00001423001
RecName- Full=Ribonuclease; EC=3.1.26.-;; Endonuclease that specifically degrades the RNA of RN [...] (298 aa)
   •    0.407

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query408
cd00844262 cd00844, MPP_Dbr1_N, Dbr1 RNA lariat debranching e 1e-178
pfam05011147 pfam05011, DBR1, Lariat debranching enzyme, C-term 2e-36
pfam00149185 pfam00149, Metallophos, Calcineurin-like phosphoes 4e-16
cd07380150 cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CW 1e-05
>gnl|CDD|163619 cd00844, MPP_Dbr1_N, Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain Back     alignment and domain information 
 Score =  496 bits (1280), Expect = e-178
 Identities = 170/262 (64%), Positives = 204/262 (77%), Gaps = 5/262 (1%)

Query: 3   IAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMK 62
           IAVEGC HGELD +Y+TL+ +E     K+DLL+CCGDFQAVRNE D++ + VP KYR+M 
Sbjct: 1   IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMG 60

Query: 63  SFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGG 122
            F+KYYSG++ API TIFIGGNHEASNYLWEL YGGW APNIY+LG+AGVV FG +RI G
Sbjct: 61  DFYKYYSGEKKAPILTIFIGGNHEASNYLWELPYGGWVAPNIYYLGYAGVVNFGGLRIAG 120

Query: 123 LSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITD 182
           LSGIY +  YR GH+ERPPY+E T RS YHVR  +V KL Q+++PIDIFLSHDWP GI  
Sbjct: 121 LSGIYKSHDYRKGHFERPPYSEDTKRSAYHVRNIEVFKLKQLKQPIDIFLSHDWPRGIYK 180

Query: 183 YGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGEDSP 242
           +G+ K+L+R K +F ++I+ GTLGS  A +LL+ LKP YWFSAHLH KFAA+V H   SP
Sbjct: 181 HGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFSAHLHVKFAALVPHENKSP 240

Query: 243 -----VTKFLALDKCLPRRKFL 259
                 TKFLALDKCLP R FL
Sbjct: 241 GNTNKETKFLALDKCLPGRDFL 262

Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262
>gnl|CDD|218381 pfam05011, DBR1, Lariat debranching enzyme, C-terminal domain Back     alignment and domain information
>gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase Back     alignment and domain information
>gnl|CDD|163623 cd07380, MPP_CWF19_N, Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 408
KOG2863456 consensus RNA lariat debranching enzyme [RNA proce 100.0
cd00844262 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t 100.0
KOG2476 528 consensus Uncharacterized conserved protein [Funct 100.0
cd07380150 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re 100.0
PF05011145 DBR1: Lariat debranching enzyme, C-terminal domain 100.0
cd07388224 MPP_Tt1561 Thermus thermophilus Tt1561 and related 99.88
cd07392188 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel 99.85
COG2129226 Predicted phosphoesterases, related to the Icc pro 99.78
PF14582255 Metallophos_3: Metallophosphoesterase, calcineurin 99.67
cd07397238 MPP_DevT Myxococcus xanthus DevT and related prote 99.59
cd07379135 MPP_239FB Homo sapiens 239FB and related proteins, 99.54
KOG3947305 consensus Phosphoesterases [General function predi 99.5
cd07402240 MPP_GpdQ Enterobacter aerogenes GpdQ and related p 99.43
PF00149200 Metallophos: Calcineurin-like phosphoesterase; Int 99.41
TIGR03729239 acc_ester putative phosphoesterase. Members of thi 99.41
cd07404166 MPP_MS158 Microscilla MS158 and related proteins, 99.33
cd07403129 MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel 99.24
PF12850156 Metallophos_2: Calcineurin-like phosphoesterase su 99.24
PRK11148275 cyclic 3',5'-adenosine monophosphate phosphodieste 99.17
TIGR00040158 yfcE phosphoesterase, MJ0936 family. Members of th 99.12
cd07393232 MPP_DR1119 Deinococcus radiodurans DR1119 and rela 99.11
cd00841155 MPP_YfcE Escherichia coli YfcE and related protein 99.11
cd07396267 MPP_Nbla03831 Homo sapiens Nbla03831 and related p 99.06
cd00838131 MPP_superfamily metallophosphatase superfamily, me 99.03
cd07400144 MPP_YydB Bacillus subtilis YydB and related protei 98.99
PRK05340241 UDP-2,3-diacylglucosamine hydrolase; Provisional 98.99
cd07385223 MPP_YkuE_C Bacillus subtilis YkuE and related prot 98.99
cd00839294 MPP_PAPs purple acid phosphatases of the metalloph 98.85
cd00840223 MPP_Mre11_N Mre11 nuclease, N-terminal metallophos 98.82
cd07395262 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, 98.81
PRK04036504 DNA polymerase II small subunit; Validated 98.81
TIGR01854231 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. 98.8
cd07401256 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal 98.74
cd07399214 MPP_YvnB Bacillus subtilis YvnB and related protei 98.73
PLN02533427 probable purple acid phosphatase 98.69
cd07394178 MPP_Vps29 Homo sapiens Vps29 and related proteins, 98.68
PRK11340271 phosphodiesterase YaeI; Provisional 98.68
PHA03008234 hypothetical protein; Provisional 98.65
cd07378277 MPP_ACP5 Homo sapiens acid phosphatase 5 and relat 98.65
cd08163257 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related 98.65
COG0622172 Predicted phosphoesterase [General function predic 98.64
PHA02546340 47 endonuclease subunit; Provisional 98.63
cd07386243 MPP_DNA_pol_II_small_archeal_C archeal DNA polymer 98.62
PRK09453182 phosphodiesterase; Provisional 98.54
cd07383199 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase 98.41
PHA02239235 putative protein phosphatase 98.37
COG1409301 Icc Predicted phosphohydrolases [General function 98.31
PRK00166275 apaH diadenosine tetraphosphatase; Reviewed 98.24
cd07423234 MPP_PrpE Bacillus subtilis PrpE and related protei 98.17
cd00845252 MPP_UshA_N_like Escherichia coli UshA-like family, 98.15
cd07410277 MPP_CpdB_N Escherichia coli CpdB and related prote 98.12
cd07424207 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do 98.11
COG1768230 Predicted phosphohydrolase [General function predi 98.07
COG0420390 SbcD DNA repair exonuclease [DNA replication, reco 98.07
cd08166195 MPP_Cdc1_like_1 uncharacterized subgroup related t 98.06
TIGR00619253 sbcd exonuclease SbcD. This family is based on the 98.06
cd07406257 MPP_CG11883_N Drosophila melanogaster CG11883 and 98.02
cd07398217 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat 98.0
PRK10966407 exonuclease subunit SbcD; Provisional 97.92
cd07409281 MPP_CD73_N CD73 ecto-5'-nucleotidase and related p 97.91
TIGR00583405 mre11 DNA repair protein (mre11). All proteins in 97.91
PRK11439218 pphA serine/threonine protein phosphatase 1; Provi 97.9
cd07408257 MPP_SA0022_N Staphylococcus aureus SA0022 and rela 97.89
cd07412288 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and 97.88
PRK13625245 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision 97.85
PRK09968218 serine/threonine-specific protein phosphatase 2; P 97.79
cd00842296 MPP_ASMase acid sphingomyelinase and related prote 97.78
TIGR00668279 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric 97.72
cd08162313 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA 97.7
cd07422257 MPP_ApaH Escherichia coli ApaH and related protein 97.69
cd00144225 MPP_PPP_family phosphoprotein phosphatases of the 97.66
cd07421304 MPP_Rhilphs Rhilph phosphatases, metallophosphatas 97.65
cd07425208 MPP_Shelphs Shewanella-like phosphatases, metallop 97.64
TIGR01530 550 nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi 97.62
cd07413222 MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat 97.61
KOG2679336 consensus Purple (tartrate-resistant) acid phospha 97.58
cd07411264 MPP_SoxB_N Thermus thermophilus SoxB and related p 97.57
cd07405285 MPP_UshA_N Escherichia coli UshA and related prote 97.56
PRK09419 1163 bifunctional 2',3'-cyclic nucleotide 2'-phosphodie 97.48
KOG1378452 consensus Purple acid phosphatase [Carbohydrate tr 97.39
COG0737517 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras 97.32
cd07390168 MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro 97.3
cd07387257 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 97.26
PTZ00422394 glideosome-associated protein 50; Provisional 97.26
COG1311481 HYS2 Archaeal DNA polymerase II, small subunit/DNA 97.17
TIGR03767496 P_acnes_RR metallophosphoesterase, PPA1498 family. 97.14
PRK09558551 ushA bifunctional UDP-sugar hydrolase/5'-nucleotid 97.14
cd07391172 MPP_PF1019 Pyrococcus furiosus PF1019 and related 97.04
smart00156271 PP2Ac Protein phosphatase 2A homologues, catalytic 96.96
TIGR00024225 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 96.96
cd07420321 MPP_RdgC Drosophila melanogaster RdgC and related 96.96
PRK09418 780 bifunctional 2',3'-cyclic nucleotide 2'-phosphodie 96.92
cd07416305 MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca 96.76
PRK09419 1163 bifunctional 2',3'-cyclic nucleotide 2'-phosphodie 96.62
PRK11907 814 bifunctional 2',3'-cyclic nucleotide 2'-phosphodie 96.62
cd07414293 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme 96.62
PTZ00480320 serine/threonine-protein phosphatase; Provisional 96.53
cd07415285 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein 96.43
PTZ00239303 serine/threonine protein phosphatase 2A; Provision 96.4
PRK09420 649 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp 96.39
cd07417316 MPP_PP5_C PP5, C-terminal metallophosphatase domai 96.38
TIGR01390 626 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod 96.23
cd07419311 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a 96.21
COG1407235 Predicted ICC-like phosphoesterases [General funct 96.2
PTZ00244294 serine/threonine-protein phosphatase PP1; Provisio 96.18
cd07407282 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and 96.17
COG2908237 Uncharacterized protein conserved in bacteria [Fun 96.16
cd07418377 MPP_PP7 PP7, metallophosphatase domain. PP7 is a p 96.07
PF04042209 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit 96.06
cd07384171 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re 95.89
cd08165156 MPP_MPPE1 human MPPE1 and related proteins, metall 95.81
COG4186186 Predicted phosphoesterase or phosphohydrolase [Gen 95.79
KOG2310 646 consensus DNA repair exonuclease MRE11 [Replicatio 95.53
cd07382255 MPP_DR1281 Deinococcus radiodurans DR1281 and rela 95.47
TIGR00282266 metallophosphoesterase, MG_246/BB_0505 family. A m 95.32
COG1408284 Predicted phosphohydrolases [General function pred 95.25
KOG3325183 consensus Membrane coat complex Retromer, subunit 94.66
cd08164193 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related 93.88
KOG0373306 consensus Serine/threonine specific protein phosph 92.6
KOG3662410 consensus Cell division control protein/predicted 91.93
TIGR03768492 RPA4764 metallophosphoesterase, RPA4764 family. Th 91.88
cd07381239 MPP_CapA CapA and related proteins, metallophospha 91.43
KOG0372303 consensus Serine/threonine specific protein phosph 91.38
KOG0374331 consensus Serine/threonine specific protein phosph 90.59
smart00854239 PGA_cap Bacterial capsule synthesis protein PGA_ca 89.81
KOG0371319 consensus Serine/threonine protein phosphatase 2A, 89.74
COG1692266 Calcineurin-like phosphoesterase [General function 86.15
KOG1432379 consensus Predicted DNA repair exonuclease SIA1 [G 84.42
KOG0375517 consensus Serine-threonine phosphatase 2B, catalyt 80.71
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] Back     alignment and domain information 
Probab=100.00  E-value=8.4e-110  Score=810.64  Aligned_cols=398  Identities=52%  Similarity=0.865  Sum_probs=360.6

Q ss_pred             CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364            1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF   80 (408)
Q Consensus         1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f   80 (408)
                      |||||.|||||+|+.||++|..++++.+.++|+||||||||+.||..|+.+|+||+|||+|++|++||+|+.+||+||||
T Consensus         1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF   80 (456)
T KOG2863|consen    1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF   80 (456)
T ss_pred             CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence            99999999999999999999999998778999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCCChhhHHHHhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHHHH
Q 015364           81 IGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHK  160 (408)
Q Consensus        81 I~GNHE~~~~l~el~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv~k  160 (408)
                      ||||||+++||+||+|||||||||||||.+||++++|+||||+||||+++||+++|+|++||+.+++||+||+|+.||.+
T Consensus        81 IGGNHEAsnyL~eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~stiRsiYHvR~~dV~~  160 (456)
T KOG2863|consen   81 IGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTIRSIYHVRISDVAK  160 (456)
T ss_pred             ecCchHHHHHHHhcccCceeccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhhhhhhhhhhhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceeeccCCC
Q 015364          161 LMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHGED  240 (408)
Q Consensus       161 L~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~~~~~~  240 (408)
                      |+++..++|||||||||+||..|||.++|+|.||||++|++.+.+||+++.+|+++|||+||||||+|++|+|.+.|+.+
T Consensus       161 Lkqlk~piDIfLSHDWP~GI~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yWfsAHLH~KFaA~v~H~~~  240 (456)
T KOG2863|consen  161 LKQLKHPIDIFLSHDWPRGIYYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYWFSAHLHVKFAALVQHNKR  240 (456)
T ss_pred             HHhhcCcceEEeecCCCcchhhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchhhhhhHhhHHhhhhcccCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeeEEEeccccCCCCCeeEEEeccCCC-CCceeeeCHHHHHHHHHhCCCCCCCCCCCCCCCCC------CCchhHHHHH
Q 015364          241 SPVTKFLALDKCLPRRKFLQVFEIESGQ-GPYEIQYDEEWLAITRTFNSVFPLTSQSANFGGVQ------HDMNDCRQWV  313 (408)
Q Consensus       241 ~~~TRFlaL~k~~~~~k~l~a~~i~~~~-~~~~l~~d~ewl~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  313 (408)
                      .++|+|+||+||+|+++||++++++.++ +++.+.||.|||+|+|.|+.+++.......+|+..      ...++.+.|+
T Consensus       241 ~~~tkflaldKclp~~~flqile~~sdp~g~~~~eyd~ewlsi~~~tn~l~~~k~~~~~~p~~~~~r~e~~~~ep~~~~~  320 (456)
T KOG2863|consen  241 SHVTKFLALDKCLPNRNFLQILEIPSDPRGPMNVEYDNEWLSILRETNFLILVKCRYRNRPNRDLCRLEILEKEPDLSHV  320 (456)
T ss_pred             CCCcccccccccCCCcchhhhccCCCCCCCCcccchhhhHHHhhhccchhhhhhhhhhcCCcccchhhhccccCCccchh
Confidence            9999999999999999999999998876 88999999999999999999999999888887632      3456788888


Q ss_pred             HHHhhhCCCCCCCceEecCCCCCCCcCccCCCCCCCCChhHHHHHHHcC-CCcccCCCcCCCCCCCCCCCCCCCCCCCCC
Q 015364          314 RSRLQERGAKPFEFVRTVPCYDASQSLSIGAFAENPQNPQTESFLQFLE-LPNLFENALESREPTQSPATLDHKGPDLDP  392 (408)
Q Consensus       314 ~~~~~~~~~~~~~f~~~~p~~~~~~~~~~~~~~~~~~n~qt~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (408)
                      ...+......|+||.+|++.|++..+   ..|+..-.||||+.||+.|| |.........+++..-.....+..-..+++
T Consensus       321 ~~k~~~~l~~~~~~~~~~~~~~~~~p---~~~~~~~~~P~~~~f~a~l~rl~~~~~~~~~~~d~dlps~~~~e~~t~~~~  397 (456)
T KOG2863|consen  321 SWKDENHLMVPDNFSRTNFVYDPKEP---IVQNLHSNNPQTSVFSAELSRLRAMHVLREIERDIDLPSYDSPEPYTLKIQ  397 (456)
T ss_pred             hhcchhhhcCCCccccceeeeccccc---cccccccCCCchhhHHHHHhhhhhhhhhhhhhcCCCccccCCccccccccH
Confidence            88888888899999999999998765   24577788999999999998 554433333332222222211212235677


Q ss_pred             CCCCCCCcc
Q 015364          393 EEIPIDDED  401 (408)
Q Consensus       393 ~~~~~~~~~  401 (408)
                      +||++|++.
T Consensus       398 ~e~~~de~~  406 (456)
T KOG2863|consen  398 KEEMVDEKA  406 (456)
T ss_pred             HHHHhhhhh
Confidence            788777654

>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain Back     alignment and domain information
>KOG2476 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>PF05011 DBR1: Lariat debranching enzyme, C-terminal domain; InterPro: IPR007708 This presumed domain is found at the C terminus of lariat debranching enzyme Back     alignment and domain information
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain Back     alignment and domain information
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] Back     alignment and domain information
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A Back     alignment and domain information
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG3947 consensus Phosphoesterases [General function prediction only] Back     alignment and domain information
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain Back     alignment and domain information
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 Back     alignment and domain information
>TIGR03729 acc_ester putative phosphoesterase Back     alignment and domain information
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain Back     alignment and domain information
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] Back     alignment and domain information
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional Back     alignment and domain information
>TIGR00040 yfcE phosphoesterase, MJ0936 family Back     alignment and domain information
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain Back     alignment and domain information
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional Back     alignment and domain information
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain Back     alignment and domain information
>PRK04036 DNA polymerase II small subunit; Validated Back     alignment and domain information
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase Back     alignment and domain information
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain Back     alignment and domain information
>PLN02533 probable purple acid phosphatase Back     alignment and domain information
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain Back     alignment and domain information
>PRK11340 phosphodiesterase YaeI; Provisional Back     alignment and domain information
>PHA03008 hypothetical protein; Provisional Back     alignment and domain information
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain Back     alignment and domain information
>COG0622 Predicted phosphoesterase [General function prediction only] Back     alignment and domain information
>PHA02546 47 endonuclease subunit; Provisional Back     alignment and domain information
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain Back     alignment and domain information
>PRK09453 phosphodiesterase; Provisional Back     alignment and domain information
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain Back     alignment and domain information
>PHA02239 putative protein phosphatase Back     alignment and domain information
>COG1409 Icc Predicted phosphohydrolases [General function prediction only] Back     alignment and domain information
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed Back     alignment and domain information
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain Back     alignment and domain information
>COG1768 Predicted phosphohydrolase [General function prediction only] Back     alignment and domain information
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] Back     alignment and domain information
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain Back     alignment and domain information
>TIGR00619 sbcd exonuclease SbcD Back     alignment and domain information
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain Back     alignment and domain information
>PRK10966 exonuclease subunit SbcD; Provisional Back     alignment and domain information
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>TIGR00583 mre11 DNA repair protein (mre11) Back     alignment and domain information
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional Back     alignment and domain information
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional Back     alignment and domain information
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional Back     alignment and domain information
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain Back     alignment and domain information
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) Back     alignment and domain information
>cd08162 MPP_PhoA_N Synechococcus sp Back     alignment and domain information
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain Back     alignment and domain information
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain Back     alignment and domain information
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain Back     alignment and domain information
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN Back     alignment and domain information
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed Back     alignment and domain information
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] Back     alignment and domain information
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain Back     alignment and domain information
>PTZ00422 glideosome-associated protein 50; Provisional Back     alignment and domain information
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family Back     alignment and domain information
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed Back     alignment and domain information
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain Back     alignment and domain information
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain Back     alignment and domain information
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related Back     alignment and domain information
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain Back     alignment and domain information
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed Back     alignment and domain information
>cd07416 MPP_PP2B PP2B, metallophosphatase domain Back     alignment and domain information
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed Back     alignment and domain information
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed Back     alignment and domain information
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain Back     alignment and domain information
>PTZ00480 serine/threonine-protein phosphatase; Provisional Back     alignment and domain information
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain Back     alignment and domain information
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed Back     alignment and domain information
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain Back     alignment and domain information
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase Back     alignment and domain information
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only] Back     alignment and domain information
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional Back     alignment and domain information
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain Back     alignment and domain information
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd07418 MPP_PP7 PP7, metallophosphatase domain Back     alignment and domain information
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast Back     alignment and domain information
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain Back     alignment and domain information
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain Back     alignment and domain information
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] Back     alignment and domain information
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] Back     alignment and domain information
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain Back     alignment and domain information
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family Back     alignment and domain information
>COG1408 Predicted phosphohydrolases [General function prediction only] Back     alignment and domain information
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms] Back     alignment and domain information
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] Back     alignment and domain information
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family Back     alignment and domain information
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain Back     alignment and domain information
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap Back     alignment and domain information
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms] Back     alignment and domain information
>COG1692 Calcineurin-like phosphoesterase [General function prediction only] Back     alignment and domain information
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] Back     alignment and domain information
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query408
2yvt_A260 Hypothetical protein AQ_1956; structural genomics, 8e-11
1uf3_A228 Hypothetical protein TT1561; metallo-dependent pho 2e-10
3rl5_A296 Metallophosphoesterase mpped2; alpha-beta fold, me 3e-04
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 Back     alignment and structure
 Score = 61.3 bits (148), Expect = 8e-11
 Identities = 29/233 (12%), Positives = 67/233 (28%), Gaps = 39/233 (16%)

Query: 10  HGELDNVYKTLQYMENINSYKIDLLLCCGDF------------QAVRNENDMESLNVPRK 57
               D + K    +      + D+L+  G+               +        +    +
Sbjct: 15  KERFDLLPKLKGVIAE---KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENE 71

Query: 58  YREMKSFWKYYSGQEVAPIPTIFIGGNHEASN--YLWELYYGGWAAPNIYFLGFAGVVKF 115
           +  +++  K++       + T  + G ++A    +L   Y    A PNI  L        
Sbjct: 72  HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLHEGFAGWR 131

Query: 116 GNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHD 175
           G   + G  G+     +      + P             EY +  + +++    + + + 
Sbjct: 132 GEFEVIGFGGLLTEHEFEEDFVLKYPRWYV---------EYILKFVNELKPRRLVTIFYT 182

Query: 176 WPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLH 228
            P G              ++          GS     +++ L P      H+ 
Sbjct: 183 PPIGE----FVDRTPEDPKH---------HGSAVVNTIIKSLNPEVAIVGHVG 222
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 Back     alignment and structure
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* Length = 296 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query408
3rl5_A296 Metallophosphoesterase mpped2; alpha-beta fold, me 99.84
2yvt_A260 Hypothetical protein AQ_1956; structural genomics, 99.78
1uf3_A228 Hypothetical protein TT1561; metallo-dependent pho 99.78
3d03_A274 Phosphohydrolase; glycerophosphodiesterase, metall 99.54
3ib7_A330 ICC protein; metallophosphoesterase, alpha-beta fo 99.48
2xmo_A443 LMO2642 protein; phosphodiesterase, hydrolase; 1.7 99.16
1s3l_A190 Hypothetical protein MJ0936; phosphodiesterase, nu 99.15
3ck2_A176 Conserved uncharacterized protein (predicted phosp 99.15
1nnw_A252 Hypothetical protein; structural genomics, PSI, pr 99.12
3av0_A386 DNA double-strand break repair protein MRE11; DNA 99.08
1ute_A313 Protein (II purple acid phosphatase); tartrate res 99.07
2nxf_A322 Putative dimetal phosphatase; dinuclear metal cent 99.03
3tho_B379 Exonuclease, putative; adenosine triphosphate, bac 99.01
1z2w_A192 Vacuolar protein sorting 29; VPS29, retromer, phos 99.0
3rqz_A246 Metallophosphoesterase; PSI-biology, midwest cente 98.98
2q8u_A336 Exonuclease, putative; structural genomics, joint 98.95
2a22_A215 Vacuolar protein sorting 29; alpha-beta-BETA-alpha 98.95
2kkn_A178 Uncharacterized protein; protein phosphatase 2A ho 98.87
1xm7_A195 Hypothetical protein AQ_1665; structural genomics, 98.85
1ii7_A333 MRE11 nuclease; RAD50, DNA double-strand break rep 98.84
3qfm_A270 SAPH, putative uncharacterized protein; sandwich f 98.83
1xzw_A426 Purple acid phosphatase; hydrolase; HET: NAG FUC M 98.64
2qfp_A424 Purple acid phosphatase; binuclear, Fe-Zn, hydrola 98.59
1hp1_A 516 5'-nucleotidase; metallophosphatase, dinuclear, me 98.47
3tgh_A342 Glideosome-associated protein 50; phosphatase fold 98.45
1su1_A208 Hypothetical protein YFCE; structural genomics, ph 98.39
1g5b_A221 Serine/threonine protein phosphatase; bacteriophag 98.2
3t1i_A431 Double-strand break repair protein MRE11A; DNA rep 98.17
3qfk_A527 Uncharacterized protein; structural genomics, cent 98.08
2dfj_A280 Diadenosinetetraphosphatase; helices and strands m 97.99
2qjc_A262 Diadenosine tetraphosphatase, putative; putative d 97.87
3ive_A509 Nucleotidase; structural genomics, PSI-2, protein 97.86
2z1a_A552 5'-nucleotidase; metal-binding, nucleotide-binding 97.78
2z72_A342 Protein-tyrosine-phosphatase; cold-active enzyme, 97.7
3ztv_A 579 NAD nucleotidase, NADN; hydrolase, NAD pyrophospha 97.7
4h2g_A546 5'-nucleotidase; dimer, hydrolase, phosphatase, ex 97.6
3h63_A315 Serine/threonine-protein phosphatase 5; metalloenz 97.58
1wao_1477 Serine/threonine protein phosphatase 5; hydrolase, 97.57
2ie4_C309 PP2A-alpha;, serine/threonine-protein phosphatase 97.54
3icf_A335 PPT, serine/threonine-protein phosphatase T; IRO m 97.53
4fbw_A417 DNA repair protein RAD32; DNA double-strand break 97.48
1fjm_A330 Protein serine/threonine phosphatase-1 (alpha ISO 97.45
4fbk_A472 DNA repair and telomere maintenance protein NBS1, 97.42
2wdc_A562 SOXB, sulfur oxidation protein SOXB; sulfur-sulfur 97.39
3e7a_A299 PP-1A, serine/threonine-protein phosphatase PP1-al 97.38
4h1s_A530 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo 97.26
1aui_A521 Calcineurin, serine/threonine phosphatase 2B; hydr 97.23
3c9f_A 557 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p 97.2
3ll8_A357 Serine/threonine-protein phosphatase 2B catalytic 97.18
3gve_A341 YFKN protein; alpha-beta-BETA-alpha sandwich, stru 96.91
3jyf_A339 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n 96.43
3e0j_A476 DNA polymerase subunit delta-2; DNA polymerase del 96.02
1t71_A281 Phosphatase, conserved HYPO; crystal, X-RAY crysta 94.3
1t70_A255 Phosphatase; crystal, X-RAY crystallography, struc 93.0
3flo_A460 DNA polymerase alpha subunit B; protein-protein co 90.69
2z06_A252 Putative uncharacterized protein TTHA0625; metal b 90.49
2yeq_A527 Apased, PHOD, alkaline phosphatase D; hydrolase, p 88.98
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* Back     alignment and structure
Probab=99.84  E-value=3.4e-20  Score=181.87  Aligned_cols=195  Identities=20%  Similarity=0.269  Sum_probs=130.4

Q ss_pred             CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364            1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF   80 (408)
Q Consensus         1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f   80 (408)
                      |||+++||+||+...+  .   +     .++|+||+|||+.......            ++..+.+++.....  .++++
T Consensus        60 mri~~iSD~H~~~~~l--~---i-----~~~D~vi~aGDl~~~g~~~------------e~~~~~~~L~~l~~--~~v~~  115 (296)
T 3rl5_A           60 TRFVCISDTRSRTDGI--Q---M-----PYGDILLHTGDFTELGLPS------------EVKKFNDWLGNLPY--EYKIV  115 (296)
T ss_dssp             EEEEEEBCCTTCCTTC--C---C-----CSCSEEEECSCCSSSCCHH------------HHHHHHHHHHTSCC--SEEEE
T ss_pred             eEEEEEeeCCCCcchh--c---c-----CCCCEEEECCcccCCCCHH------------HHHHHHHHHHhCCC--CeEEE
Confidence            7999999999987543  1   1     2689999999998654322            23455666654432  35899


Q ss_pred             EcCCCCCh---hhHHHHh-----------------hCC--ccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCC
Q 015364           81 IGGNHEAS---NYLWELY-----------------YGG--WAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYE  138 (408)
Q Consensus        81 I~GNHE~~---~~l~el~-----------------~gg--~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e  138 (408)
                      |.||||..   ..+.++.                 ...  .+..++.||.+ ++++++|+||.|.++.-....+      
T Consensus       116 V~GNHD~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~-~~~~i~Gl~i~Gsp~tP~~~~~------  188 (296)
T 3rl5_A          116 IAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD-SEVTVKGFRIYGAPWTPWFNGW------  188 (296)
T ss_dssp             CCCTTCGGGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS-EEEEETTEEEEEECCBCC--CC------
T ss_pred             EcCCcccccchhhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC-CcEEECCEEEEEecCCCCCCCc------
Confidence            99999984   2222220                 011  13468899965 5668999999996554211110      


Q ss_pred             CCCCChhhhhhhhccchHHHHHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHH-HHh
Q 015364          139 RPPYNESTIRSVYHVREYDVHKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLL-EKL  217 (408)
Q Consensus       139 ~~Py~~~~irs~yh~re~dv~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll-~~l  217 (408)
                      ...|.+.  .       ....++.++..++||||||.+|.++.+...              ....+.||..+.+.+ ++.
T Consensus       189 ~f~~~~~--~-------~~~~~~~~ip~~~dILvTH~PP~g~~D~~~--------------~~~~~~G~~~L~~~i~~~~  245 (296)
T 3rl5_A          189 GFNLPRG--Q-------SLLDKWNLIPEGTDILMTHGPPLGFRDWVP--------------KELQRVGCVELLNTVQRRV  245 (296)
T ss_dssp             TTBCCTT--H-------HHHHHHTTSCTTCSEEEESSCBTTSSCEEG--------------GGTEECSBHHHHHHHHHTT
T ss_pred             CCCcchH--H-------HHHHHHhhCCCCCeEEEECCCccccccccc--------------cccCcCChHHHHHHHHHhc
Confidence            1222221  1       112344556678999999999999865310              012468999999988 699


Q ss_pred             CCCEEEEcCCCCccceeeccCCCCCeeEEEeccccCC
Q 015364          218 KPSYWFSAHLHCKFAAVVQHGEDSPVTKFLALDKCLP  254 (408)
Q Consensus       218 kPry~FsGH~H~~f~~~~~~~~~~~~TRFlaL~k~~~  254 (408)
                      +|++|++||.|..+.....     ..|.|+|.+.|+.
T Consensus       246 ~p~l~v~GH~H~~~~~~~~-----g~t~vvNpGs~~~  277 (296)
T 3rl5_A          246 RPKLHVFGGIHEGYGTMTD-----GYTTYINASTCTV  277 (296)
T ss_dssp             CCSEEEECSCGGGCEEEEC-----SSCEEEECBCSCT
T ss_pred             CCCEEEECCccCCCceEEE-----CCEEEEECCcCCc
Confidence            9999999999998865433     2599999999984
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Back     alignment and structure
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Back     alignment and structure
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Back     alignment and structure
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Back     alignment and structure
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Back     alignment and structure
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A Back     alignment and structure
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 Back     alignment and structure
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A Back     alignment and structure
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* Back     alignment and structure
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Back     alignment and structure
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Back     alignment and structure
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C Back     alignment and structure
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A Back     alignment and structure
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 Back     alignment and structure
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A Back     alignment and structure
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 Back     alignment and structure
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} Back     alignment and structure
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 Back     alignment and structure
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A Back     alignment and structure
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* Back     alignment and structure
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Back     alignment and structure
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Back     alignment and structure
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A Back     alignment and structure
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Back     alignment and structure
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 Back     alignment and structure
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 Back     alignment and structure
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} Back     alignment and structure
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} Back     alignment and structure
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Back     alignment and structure
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} Back     alignment and structure
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* Back     alignment and structure
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 Back     alignment and structure
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Back     alignment and structure
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* Back     alignment and structure
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* Back     alignment and structure
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Back     alignment and structure
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Back     alignment and structure
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Back     alignment and structure
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* Back     alignment and structure
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Back     alignment and structure
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* Back     alignment and structure
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A Back     alignment and structure
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Back     alignment and structure
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} Back     alignment and structure
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Back     alignment and structure
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 Back     alignment and structure
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Back     alignment and structure
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} Back     alignment and structure
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} Back     alignment and structure
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 Back     alignment and structure
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 Back     alignment and structure
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} Back     alignment and structure
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A Back     alignment and structure
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 408
d2yvta1257 d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 1e-08
d1su1a_184 d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia 0.001
d1uf3a_228 d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu 0.002
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TT1561-like
domain: Uncharacterized protein Aq 1956
species: Aquifex aeolicus [TaxId: 63363]

 Score = 53.2 bits (126), Expect = 1e-08
 Identities = 29/241 (12%), Positives = 68/241 (28%), Gaps = 39/241 (16%)

Query: 2   RIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDF------------QAVRNENDM 49
           ++          D + K       I   + D+L+  G+               +      
Sbjct: 4   KVLAIKNFKERFDLLPKLKGV---IAEKQPDILVVVGNILKNEALEKEYERAHLARREPN 60

Query: 50  ESLNVPRKYREMKSFWKYYSGQEVAPIPTIFIGGNHEA--SNYLWELYYGGWAAPNIYFL 107
             +    ++  +++  K++       + T  + G ++A    +L   Y    A PNI  L
Sbjct: 61  RKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVL 120

Query: 108 GFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDVHKLMQIEEP 167
                   G   + G  G+           E     +  ++      EY +  + +++  
Sbjct: 121 HEGFAGWRGEFEVIGFGGL---------LTEHEFEEDFVLKYPRWYVEYILKFVNELKPR 171

Query: 168 IDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHL 227
             + + +  P               +            GS     +++ L P      H+
Sbjct: 172 RLVTIFYTPP-------------IGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHV 218

Query: 228 H 228
            
Sbjct: 219 G 219
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Length = 184 Back     information, alignment and structure
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query408
d1uf3a_228 Hypothetical protein TT1561 {Thermus thermophilus 99.78
d2yvta1257 Uncharacterized protein Aq_1956 {Aquifex aeolicus 99.78
d2hy1a1256 Rv0805 cyclic nucleotide phosphodiesterase {Mycoba 99.43
d3d03a1271 Glycerophosphodiesterase GpdQ {Enterobacter aeroge 99.43
d1s3la_165 Putative phosphodiesterase MJ0936 {Methanococcus j 99.37
d1nnwa_251 Hypothetical protein PF1291 {Archaeon Pyrococcus f 99.17
d3ck2a1173 Uncharacterized protein SP1879 {Streptococcus pneu 99.09
d1z2wa1182 Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus 99.06
d1su1a_184 Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 99.05
d2a22a1193 Vacuolar protein sorting 29, VPS29 {Cryptosporidiu 98.88
d2nxfa1320 Uncharacterized C17orf48 homolog zgc:64213 {Zebraf 98.82
d2qfra2312 Plant purple acid phosphatase, catalytic domain {K 98.66
d1utea_302 Mammalian purple acid phosphatase {Pig (Sus scrofa 98.49
d1ii7a_333 Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 98.3
d1xm7a_188 Hypothetical protein aq_1666 {Aquifex aeolicus [Ta 98.1
d1g5ba_219 lambda ser/thr protein phosphatase {Bacteriophage 97.98
d2z1aa2302 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term 97.47
d1usha2337 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term 97.27
d3c9fa2322 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term 97.13
d1s95a_324 Serine/threonine protein phosphatase 5, PP5 {Human 96.49
d1jk7a_294 Protein phosphatase-1 (PP-1) {Human (Homo sapiens) 96.01
d3c5wc1288 Protein phosphatase 2A catalytic subunit alpha iso 95.95
d1auia_473 Protein phosphatase-2B (PP-2B, calcineurin A subun 95.4
d1t71a_281 Hypothetical protein MPN349 {Mycoplasma pneumoniae 87.11
d1t70a_255 Putative phosphatase DR1281 {Deinococcus radiodura 82.93
d2z06a1252 Hypothetical protein TTHA0625 {Thermus thermophilu 80.12
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: TT1561-like
domain: Hypothetical protein TT1561
species: Thermus thermophilus [TaxId: 274]

Probab=99.78  E-value=2.5e-18  Score=154.33  Aligned_cols=211  Identities=15%  Similarity=0.168  Sum_probs=126.3

Q ss_pred             CEEEEEcCCCCChHHHHHHHHHHHHhcCCCccEEEEecCccccCCcchhccccchhhhHhhhHHHHHhhCCCCCCccEEE
Q 015364            1 MRIAVEGCMHGELDNVYKTLQYMENINSYKIDLLLCCGDFQAVRNENDMESLNVPRKYREMKSFWKYYSGQEVAPIPTIF   80 (408)
Q Consensus         1 mKIlV~GD~HG~ld~i~~~v~~l~~k~g~~~DlLI~~GDf~~~~~~~dl~~l~~p~k~~~l~dF~~y~~g~~~~pvpt~f   80 (408)
                      ++||++||+||+++++-+.++.++++   ++|+||++||+.......           ++...|.+   .+++..+|+++
T Consensus         6 ~~i~~~sd~hg~~eale~~~~~~~~~---~~D~vv~~GDl~~~~~~~-----------~~~~~~~~---~L~~~~~pv~~   68 (228)
T d1uf3a_           6 RYILATSNPMGDLEALEKFVKLAPDT---GADAIALIGNLMPKAAKS-----------RDYAAFFR---ILSEAHLPTAY   68 (228)
T ss_dssp             CEEEEEECCTTCHHHHHHHHTHHHHH---TCSEEEEESCSSCTTCCH-----------HHHHHHHH---HHGGGCSCEEE
T ss_pred             cEEEEEeCCCCCHHHHHHHHHHHhhc---CCCEEEECCCCCCCCccc-----------hHHHHhhh---hhccccceEEE
Confidence            57999999999999888777766554   489999999997543221           11222333   34556789999


Q ss_pred             EcCCCCChhhHHH--HhhCCccCCceEEecCceEEEECCEEEEeecccCCCcccCCCCCCCCCCChhhhhhhhccchHHH
Q 015364           81 IGGNHEASNYLWE--LYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNARHYRLGHYERPPYNESTIRSVYHVREYDV  158 (408)
Q Consensus        81 I~GNHE~~~~l~e--l~~gg~va~NI~yLg~~gv~~i~GlrIaGlsGi~~~~~y~~~~~e~~Py~~~~irs~yh~re~dv  158 (408)
                      |.||||.......  .............+........++..+.|+++..... +...   ............    +...
T Consensus        69 i~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~----~~l~  140 (228)
T d1uf3a_          69 VPGPQDAPIWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADE-GEPE---EHEALRYPAWVA----EYRL  140 (228)
T ss_dssp             ECCTTSCSHHHHHHHHHHHHHHCTTEEECBTSEEEETTTEEEEEECSEEESS-SCCB---SSSSCEEEHHHH----HHHH
T ss_pred             EecCCCchhhhhhhhhcccccccccccccceeeeeccCCEEEEecCCccccC-cCcc---hhhhhhhhHHHH----HHHH
Confidence            9999997632211  1111112334444444444455788888887654321 1000   000100000000    0001


Q ss_pred             HHHhccCCCccEEEeCCCCCCCccCCchhhhhhhcchhhhcccCCCCChHHHHHHHHHhCCCEEEEcCCCCccceeeccC
Q 015364          159 HKLMQIEEPIDIFLSHDWPCGITDYGNCKELVRHKQYFEKEIQDGTLGSEPAAQLLEKLKPSYWFSAHLHCKFAAVVQHG  238 (408)
Q Consensus       159 ~kL~~~~~~vDILLTHdwP~gI~~~g~~~~L~~~kp~f~~di~~~~lGS~~l~~Ll~~lkPry~FsGH~H~~f~~~~~~~  238 (408)
                      ..+.......+|+++|.+|.+...                    ...|+..+.++++..+|+|++|||.|..+.. .   
T Consensus       141 ~~l~~~~~~~~il~~H~p~~~~~~--------------------~~~~~~~~~~~~~~~~~~lvl~GH~H~~~~~-~---  196 (228)
T d1uf3a_         141 KALWELKDYPKIFLFHTMPYHKGL--------------------NEQGSHEVAHLIKTHNPLLVLVAGKGQKHEM-L---  196 (228)
T ss_dssp             GGGGGSCSCCEEEEESSCBCBTTT--------------------BTTSBHHHHHHHHHHCCSEEEECCSSCEEEE-E---
T ss_pred             HHHhhccCCceEEEEeeeccCccc--------------------cccccHHHHHHHHhcCCcEEEEcccccchhc-c---
Confidence            112334556799999999976321                    2468999999999999999999999975432 1   


Q ss_pred             CCCCeeEEEeccccCCCCCeeEEEecc
Q 015364          239 EDSPVTKFLALDKCLPRRKFLQVFEIE  265 (408)
Q Consensus       239 ~~~~~TRFlaL~k~~~~~k~l~a~~i~  265 (408)
                         ..|.+++.+.+..+  ..-++++.
T Consensus       197 ---g~~~~v~pG~~~~g--~y~~i~~~  218 (228)
T d1uf3a_         197 ---GASWVVVPGDLSEG--EYSLLDLR  218 (228)
T ss_dssp             ---TTEEEEECCBGGGT--EEEEEETT
T ss_pred             ---CCEEEEECCccccc--eEEEEEcc
Confidence               13678887776432  34455554
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Back     information, alignment and structure
>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} Back     information, alignment and structure
>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Back     information, alignment and structure
>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} Back     information, alignment and structure
>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} Back     information, alignment and structure
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Back     information, alignment and structure
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} Back     information, alignment and structure
>d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure