Citrus Sinensis ID: 015464
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 406 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SA96 | 392 | Arogenate dehydratase/pre | yes | no | 0.953 | 0.987 | 0.661 | 1e-149 | |
| Q9SGD6 | 413 | Arogenate dehydratase/pre | no | no | 0.741 | 0.728 | 0.693 | 1e-119 | |
| Q9ZUY3 | 424 | Arogenate dehydratase 3, | no | no | 0.780 | 0.747 | 0.663 | 1e-118 | |
| Q9SSE7 | 381 | Arogenate dehydratase/pre | no | no | 0.741 | 0.790 | 0.699 | 1e-117 | |
| O22241 | 424 | Arogenate dehydratase 4, | no | no | 0.748 | 0.716 | 0.646 | 1e-108 | |
| Q9FNJ8 | 425 | Arogenate dehydratase 5, | no | no | 0.780 | 0.745 | 0.618 | 1e-104 | |
| P43900 | 385 | P-protein OS=Haemophilus | yes | no | 0.672 | 0.709 | 0.315 | 2e-42 | |
| O67085 | 362 | P-protein OS=Aquifex aeol | yes | no | 0.650 | 0.729 | 0.377 | 7e-41 | |
| Q02286 | 387 | P-protein OS=Enterobacter | N/A | no | 0.669 | 0.702 | 0.326 | 3e-38 | |
| Q58054 | 272 | Prephenate dehydratase OS | yes | no | 0.640 | 0.955 | 0.369 | 3e-38 |
| >sp|Q9SA96|AROD1_ARATH Arogenate dehydratase/prephenate dehydratase 1, chloroplastic OS=Arabidopsis thaliana GN=ADT1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 268/405 (66%), Positives = 317/405 (78%), Gaps = 18/405 (4%)
Query: 1 MALKANPVWGCAKTPHFHKGLPDLVPNRCGFGLD-LRVLNKWECTCVGVLAQTHRAITPV 59
MAL+ P+W C +T H L L F D R WEC+ + + RA+T +
Sbjct: 1 MALRCFPIWVCPQTTHHRSPLMGLAE----FDADKRRRFCLWECSS----SASQRAVTAI 52
Query: 60 EDDRPYTPDVQ-SSEANERSQDSQSSGFHKDLNLLPTLVYGQIAEPLSIMELSSSPDDGT 118
E + P++ +++ SS+ +Q++QS FH+DL++LP +PL+ L SS D +
Sbjct: 53 EGEIPFSRELKKSSDELGLTQETQSLSFHRDLSMLP--------KPLTANSLYSSDGDDS 104
Query: 119 KVRVAYQGLPGAYSEAAARKAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGGSI 178
KVR+++QG+PGAYSE AA KA+P CETVPC+QFEAAF+AVELWLVDKAVLPIENSVGGSI
Sbjct: 105 KVRISFQGIPGAYSETAALKAFPNCETVPCEQFEAAFQAVELWLVDKAVLPIENSVGGSI 164
Query: 179 HRNYDLLLRHRLHIVGEVQLVVNHCLLGLPGVLKEELKRVFSHPQALAQCEMTLSNLGIV 238
HRNYDLLLRHRLHIV EV L VNHCLLG+PGV KE++K V SHPQAL QC +L+NLGI
Sbjct: 165 HRNYDLLLRHRLHIVQEVHLPVNHCLLGVPGVKKEDIKCVLSHPQALDQCVNSLNNLGIQ 224
Query: 239 RISADDTAGAAQMVASIGERDTGAVASAQAAEIYGLDILAEKIQDDDDNVTRFLILAREP 298
RISA DTA AAQ V+S G+ D GA+AS +AA IYGLDILAE IQDD +NVTRFLILAREP
Sbjct: 225 RISAKDTATAAQTVSSSGKIDVGAIASVRAANIYGLDILAENIQDDVNNVTRFLILAREP 284
Query: 299 IIAGTDRPYKTSIVFTLEEGPGMLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSNKG 358
+I TDRPYKTSIVF+LEEGPG+LFKALAVFALR INL+KIESRPQR+RPLRVVD SN G
Sbjct: 285 MIPRTDRPYKTSIVFSLEEGPGVLFKALAVFALRSINLSKIESRPQRRRPLRVVDGSNNG 344
Query: 359 SAKYFDYLFYIDFEASMADPRAQFALGHLQEFATFLRVLGCYPMD 403
SAKYFDYLFYIDFEASMAD RAQ ALGHLQEFA+F+R+LGCYPMD
Sbjct: 345 SAKYFDYLFYIDFEASMADTRAQHALGHLQEFASFIRILGCYPMD 389
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Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine. Arabidopsis thaliana (taxid: 3702) EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 9EC: 1 |
| >sp|Q9SGD6|AROD6_ARATH Arogenate dehydratase/prephenate dehydratase 6, chloroplastic OS=Arabidopsis thaliana GN=ADT6 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9ZUY3|AROD3_ARATH Arogenate dehydratase 3, chloroplastic OS=Arabidopsis thaliana GN=ADT3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9SSE7|AROD2_ARATH Arogenate dehydratase/prephenate dehydratase 2, chloroplastic OS=Arabidopsis thaliana GN=ADT2 PE=1 SV=1 | Back alignment and function description |
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| >sp|O22241|AROD4_ARATH Arogenate dehydratase 4, chloroplastic OS=Arabidopsis thaliana GN=ADT4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9FNJ8|AROD5_ARATH Arogenate dehydratase 5, chloroplastic OS=Arabidopsis thaliana GN=ADT5 PE=1 SV=1 | Back alignment and function description |
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| >sp|P43900|PHEA_HAEIN P-protein OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=pheA PE=4 SV=1 | Back alignment and function description |
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| >sp|O67085|PHEA_AQUAE P-protein OS=Aquifex aeolicus (strain VF5) GN=pheA PE=4 SV=1 | Back alignment and function description |
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| >sp|Q02286|PHEA_ENTAG P-protein OS=Enterobacter agglomerans GN=pheA PE=4 SV=1 | Back alignment and function description |
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| >sp|Q58054|PHEA_METJA Prephenate dehydratase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=pheA PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 406 | ||||||
| 224113661 | 400 | arogenate/prephenate dehydratase [Populu | 0.975 | 0.99 | 0.770 | 1e-180 | |
| 255554867 | 403 | prephenate dehydratase, putative [Ricinu | 0.975 | 0.982 | 0.755 | 1e-175 | |
| 224078592 | 397 | arogenate/prephenate dehydratase [Populu | 0.970 | 0.992 | 0.739 | 1e-172 | |
| 302144131 | 396 | unnamed protein product [Vitis vinifera] | 0.963 | 0.987 | 0.714 | 1e-163 | |
| 359483430 | 575 | PREDICTED: arogenate dehydratase/prephen | 0.950 | 0.671 | 0.721 | 1e-163 | |
| 356563073 | 399 | PREDICTED: arogenate dehydratase/prephen | 0.975 | 0.992 | 0.709 | 1e-156 | |
| 357480317 | 393 | Arogenate dehydratase/prephenate dehydra | 0.933 | 0.964 | 0.685 | 1e-150 | |
| 388496604 | 393 | unknown [Medicago truncatula] | 0.933 | 0.964 | 0.680 | 1e-149 | |
| 449479475 | 396 | PREDICTED: arogenate dehydratase/prephen | 0.953 | 0.977 | 0.681 | 1e-148 | |
| 297844030 | 392 | prephenate dehydratase family protein [A | 0.948 | 0.982 | 0.656 | 1e-148 |
| >gi|224113661|ref|XP_002316535.1| arogenate/prephenate dehydratase [Populus trichocarpa] gi|222859600|gb|EEE97147.1| arogenate/prephenate dehydratase [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust.
Identities = 316/410 (77%), Positives = 350/410 (85%), Gaps = 14/410 (3%)
Query: 1 MALKA-NPVWGCAKTPHFHKGLPDLVPNRCG---FGLDLRVLNKWECTCVGVLAQTHRAI 56
MAL+A +P+W PH G+ DL RC DL L KWEC C+ VLAQ RAI
Sbjct: 1 MALRAASPIWISPLRPHSKVGVSDLGLRRCADLRCYWDLERLPKWECCCLSVLAQ--RAI 58
Query: 57 TPVEDDRPYTPDVQSSEANERSQDSQSSGFHKDLNLLPTLVYGQIAEPLSIMELSSSPDD 116
TPVED++P P V +S A ++ QD+QS GFHKDLNLLP +PLS +LSSSP +
Sbjct: 59 TPVEDEKPSAPQVDTSRATDQVQDTQSRGFHKDLNLLP--------KPLSAADLSSSPGN 110
Query: 117 GTKVRVAYQGLPGAYSEAAARKAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGG 176
G +VRVAYQG+PGAYSEAAA KAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGG
Sbjct: 111 GAQVRVAYQGIPGAYSEAAALKAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGG 170
Query: 177 SIHRNYDLLLRHRLHIVGEVQLVVNHCLLGLPGVLKEELKRVFSHPQALAQCEMTLSNLG 236
SIHRNYDLLLRHRLHIVGEVQ+VVNHCLLGLPGV KEELKRV SHPQALAQCEMTL+ LG
Sbjct: 171 SIHRNYDLLLRHRLHIVGEVQMVVNHCLLGLPGVPKEELKRVLSHPQALAQCEMTLTKLG 230
Query: 237 IVRISADDTAGAAQMVASIGERDTGAVASAQAAEIYGLDILAEKIQDDDDNVTRFLILAR 296
I+R+SADD+AGAAQMV + GERDTGA+ASA+AA+IYGL+IL EKIQDDDDN+TRFLILAR
Sbjct: 231 IIRVSADDSAGAAQMVVANGERDTGAIASARAADIYGLNILLEKIQDDDDNITRFLILAR 290
Query: 297 EPIIAGTDRPYKTSIVFTLEEGPGMLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSN 356
EP+I G++RP+KTSIVFTLEEGPGMLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSN
Sbjct: 291 EPMIPGSNRPHKTSIVFTLEEGPGMLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSN 350
Query: 357 KGSAKYFDYLFYIDFEASMADPRAQFALGHLQEFATFLRVLGCYPMDTTL 406
KGSA+YFDYLFYIDF+ASMA+PRAQ AL HLQEFA FLRVLGCYP D TL
Sbjct: 351 KGSARYFDYLFYIDFDASMAEPRAQHALAHLQEFARFLRVLGCYPTDATL 400
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554867|ref|XP_002518471.1| prephenate dehydratase, putative [Ricinus communis] gi|223542316|gb|EEF43858.1| prephenate dehydratase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224078592|ref|XP_002305566.1| arogenate/prephenate dehydratase [Populus trichocarpa] gi|222848530|gb|EEE86077.1| arogenate/prephenate dehydratase [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|302144131|emb|CBI23236.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359483430|ref|XP_002268124.2| PREDICTED: arogenate dehydratase/prephenate dehydratase 1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356563073|ref|XP_003549790.1| PREDICTED: arogenate dehydratase/prephenate dehydratase 1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357480317|ref|XP_003610444.1| Arogenate dehydratase/prephenate dehydratase [Medicago truncatula] gi|355511499|gb|AES92641.1| Arogenate dehydratase/prephenate dehydratase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388496604|gb|AFK36368.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449479475|ref|XP_004155609.1| PREDICTED: arogenate dehydratase/prephenate dehydratase 1, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297844030|ref|XP_002889896.1| prephenate dehydratase family protein [Arabidopsis lyrata subsp. lyrata] gi|297335738|gb|EFH66155.1| prephenate dehydratase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 406 | ||||||
| TAIR|locus:2027332 | 392 | ADT1 "arogenate dehydratase 1" | 0.953 | 0.987 | 0.661 | 3.3e-134 | |
| TAIR|locus:2199963 | 413 | ADT6 "arogenate dehydratase 6" | 0.894 | 0.878 | 0.593 | 9.7e-112 | |
| TAIR|locus:2042021 | 424 | PD1 "prephenate dehydratase 1" | 0.780 | 0.747 | 0.663 | 1e-109 | |
| TAIR|locus:2091127 | 381 | ADT2 "arogenate dehydratase 2" | 0.741 | 0.790 | 0.699 | 7e-109 | |
| TAIR|locus:2101630 | 424 | ADT4 "arogenate dehydratase 4" | 0.748 | 0.716 | 0.646 | 6.9e-102 | |
| TAIR|locus:2162459 | 425 | ADT5 "arogenate dehydratase 5" | 0.780 | 0.745 | 0.621 | 1.7e-100 | |
| TIGR_CMR|DET_0461 | 358 | DET_0461 "chorismate mutase/pr | 0.647 | 0.734 | 0.397 | 1.8e-46 | |
| UNIPROTKB|Q0C4F5 | 278 | HNE_0659 "Prephenate dehydrata | 0.655 | 0.956 | 0.385 | 1.1e-41 | |
| UNIPROTKB|Q9KU24 | 391 | VC_0705 "Chorismate mutase/pre | 0.726 | 0.754 | 0.326 | 2.6e-40 | |
| TIGR_CMR|VC_0705 | 391 | VC_0705 "chorismate mutase/pre | 0.726 | 0.754 | 0.326 | 2.6e-40 |
| TAIR|locus:2027332 ADT1 "arogenate dehydratase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1315 (468.0 bits), Expect = 3.3e-134, P = 3.3e-134
Identities = 268/405 (66%), Positives = 317/405 (78%)
Query: 1 MALKANPVWGCAKTPHFHKGLPDLVPNRCGFGLDLRV-LNKWECTCVGVLAQTHRAITPV 59
MAL+ P+W C +T H L L F D R WEC+ + + RA+T +
Sbjct: 1 MALRCFPIWVCPQTTHHRSPLMGLAE----FDADKRRRFCLWECSS----SASQRAVTAI 52
Query: 60 EDDRPYTPDVQ-SSEANERSQDSQSSGFHKDLNLLPTLVYGQIAEPLSIMELSSSPDDGT 118
E + P++ +++ SS+ +Q++QS FH+DL++LP +PL+ L SS D +
Sbjct: 53 EGEIPFSRELKKSSDELGLTQETQSLSFHRDLSMLP--------KPLTANSLYSSDGDDS 104
Query: 119 KVRVAYQGLPGAYSEAAARKAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGGSI 178
KVR+++QG+PGAYSE AA KA+P CETVPC+QFEAAF+AVELWLVDKAVLPIENSVGGSI
Sbjct: 105 KVRISFQGIPGAYSETAALKAFPNCETVPCEQFEAAFQAVELWLVDKAVLPIENSVGGSI 164
Query: 179 HRNYDLLLRHRLHIVGEVQLVVNHCLLGLPGVLKEELKRVFSHPQALAQCEMTLSNLGIV 238
HRNYDLLLRHRLHIV EV L VNHCLLG+PGV KE++K V SHPQAL QC +L+NLGI
Sbjct: 165 HRNYDLLLRHRLHIVQEVHLPVNHCLLGVPGVKKEDIKCVLSHPQALDQCVNSLNNLGIQ 224
Query: 239 RISADDTAGAAQMVASIGERDTGAVASAQAAEIYGLDILAEKIQDDDDNVTRFLILAREP 298
RISA DTA AAQ V+S G+ D GA+AS +AA IYGLDILAE IQDD +NVTRFLILAREP
Sbjct: 225 RISAKDTATAAQTVSSSGKIDVGAIASVRAANIYGLDILAENIQDDVNNVTRFLILAREP 284
Query: 299 IIAGTDRPYKTSIVFTLEEGPGMLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSNKG 358
+I TDRPYKTSIVF+LEEGPG+LFKALAVFALR INL+KIESRPQR+RPLRVVD SN G
Sbjct: 285 MIPRTDRPYKTSIVFSLEEGPGVLFKALAVFALRSINLSKIESRPQRRRPLRVVDGSNNG 344
Query: 359 SAKYFDYLFYIDFEASMADPRAQFALGHLQEFATFLRVLGCYPMD 403
SAKYFDYLFYIDFEASMAD RAQ ALGHLQEFA+F+R+LGCYPMD
Sbjct: 345 SAKYFDYLFYIDFEASMADTRAQHALGHLQEFASFIRILGCYPMD 389
|
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| TAIR|locus:2199963 ADT6 "arogenate dehydratase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2042021 PD1 "prephenate dehydratase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2091127 ADT2 "arogenate dehydratase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2101630 ADT4 "arogenate dehydratase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2162459 ADT5 "arogenate dehydratase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TIGR_CMR|DET_0461 DET_0461 "chorismate mutase/prephenate dehydratase" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q0C4F5 HNE_0659 "Prephenate dehydratase" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9KU24 VC_0705 "Chorismate mutase/prephenate dehydratase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
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| TIGR_CMR|VC_0705 VC_0705 "chorismate mutase/prephenate dehydratase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SA96 | AROD1_ARATH | 4, ., 2, ., 1, ., 9, 1 | 0.6617 | 0.9532 | 0.9872 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 4.2.1.91 | 0.991 |
| 3rd Layer | 4.2.1 | 0.976 |
| 4th Layer | 4.2.1.51 | 0.991 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 406 | |||
| PLN02317 | 382 | PLN02317, PLN02317, arogenate dehydratase | 0.0 | |
| COG0077 | 279 | COG0077, PheA, Prephenate dehydratase [Amino acid | 1e-108 | |
| PRK11899 | 279 | PRK11899, PRK11899, prephenate dehydratase; Provis | 2e-90 | |
| PRK11898 | 283 | PRK11898, PRK11898, prephenate dehydratase; Provis | 1e-85 | |
| pfam00800 | 181 | pfam00800, PDT, Prephenate dehydratase | 3e-81 | |
| PRK10622 | 386 | PRK10622, pheA, bifunctional chorismate mutase/pre | 4e-51 | |
| cd04905 | 80 | cd04905, ACT_CM-PDT, C-terminal ACT domain of the | 1e-33 | |
| cd04880 | 75 | cd04880, ACT_AAAH-PDT-like, ACT domain of the nonh | 2e-26 | |
| cd04904 | 74 | cd04904, ACT_AAAH, ACT domain of the nonheme iron- | 1e-09 | |
| cd04931 | 90 | cd04931, ACT_PAH, ACT domain of the nonheme iron-d | 4e-07 | |
| TIGR01268 | 436 | TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydrox | 3e-06 | |
| cd04929 | 74 | cd04929, ACT_TPH, ACT domain of the nonheme iron-d | 2e-05 | |
| cd04930 | 115 | cd04930, ACT_TH, ACT domain of the nonheme iron-de | 2e-04 | |
| cd02116 | 60 | cd02116, ACT, ACT domains are commonly involved in | 6e-04 |
| >gnl|CDD|215181 PLN02317, PLN02317, arogenate dehydratase | Back alignment and domain information |
|---|
Score = 655 bits (1691), Expect = 0.0
Identities = 269/366 (73%), Positives = 302/366 (82%), Gaps = 11/366 (3%)
Query: 41 WECTCVGVLAQTHRAITPVEDDRPYTPDVQSSEANERSQDSQSSGFHKDLNLLPTLVYGQ 100
W+ +C + + + +P D P P V+SS +QS FH+DL+ LP
Sbjct: 27 WQSSCAIL---SSKVRSPEGDAPPSRPAVESSGGAGLVVATQSVSFHRDLSGLP------ 77
Query: 101 IAEPLSIMELSSSPDDGTKVRVAYQGLPGAYSEAAARKAYPKCETVPCDQFEAAFKAVEL 160
PLSI +LS SP G+K+RVAYQG+PGAYSEAAARKAYP CE VPC+QFEAAF+AVEL
Sbjct: 78 --RPLSITDLSPSPMHGSKLRVAYQGVPGAYSEAAARKAYPNCEAVPCEQFEAAFQAVEL 135
Query: 161 WLVDKAVLPIENSVGGSIHRNYDLLLRHRLHIVGEVQLVVNHCLLGLPGVLKEELKRVFS 220
WL D+AVLPIENS+GGSIHRNYDLLLRHRLHIVGEVQL V+HCLL LPGV KEELKRV S
Sbjct: 136 WLADRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEELKRVIS 195
Query: 221 HPQALAQCEMTLSNLGIVRISADDTAGAAQMVASIGERDTGAVASAQAAEIYGLDILAEK 280
HPQALAQCE TL+ LG+VR + DDTAGAA+MVA+ G RDT A+ASA+AAE+YGLDILAE
Sbjct: 196 HPQALAQCENTLTKLGVVREAVDDTAGAAKMVAANGLRDTAAIASARAAELYGLDILAEG 255
Query: 281 IQDDDDNVTRFLILAREPIIAGTDRPYKTSIVFTLEEGPGMLFKALAVFALRDINLTKIE 340
IQDD DNVTRFL+LAREPII TDRP+KTSIVF+LEEGPG+LFKALAVFALRDINLTKIE
Sbjct: 256 IQDDSDNVTRFLMLAREPIIPRTDRPFKTSIVFSLEEGPGVLFKALAVFALRDINLTKIE 315
Query: 341 SRPQRKRPLRVVDDSNKGSAKYFDYLFYIDFEASMADPRAQFALGHLQEFATFLRVLGCY 400
SRPQRKRPLRVVDDSN G+AKYFDYLFY+DFEASMADPRAQ AL HLQEFATFLRVLG Y
Sbjct: 316 SRPQRKRPLRVVDDSNSGTAKYFDYLFYVDFEASMADPRAQNALAHLQEFATFLRVLGSY 375
Query: 401 PMDTTL 406
PMD T
Sbjct: 376 PMDMTP 381
|
Length = 382 |
| >gnl|CDD|223155 COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|237014 PRK11899, PRK11899, prephenate dehydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237013 PRK11898, PRK11898, prephenate dehydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|216127 pfam00800, PDT, Prephenate dehydratase | Back alignment and domain information |
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| >gnl|CDD|182594 PRK10622, pheA, bifunctional chorismate mutase/prephenate dehydratase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|153177 cd04905, ACT_CM-PDT, C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme | Back alignment and domain information |
|---|
| >gnl|CDD|153152 cd04880, ACT_AAAH-PDT-like, ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) | Back alignment and domain information |
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| >gnl|CDD|153176 cd04904, ACT_AAAH, ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) | Back alignment and domain information |
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| >gnl|CDD|153203 cd04931, ACT_PAH, ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH) | Back alignment and domain information |
|---|
| >gnl|CDD|130335 TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydroxylase, tetrameric form | Back alignment and domain information |
|---|
| >gnl|CDD|153201 cd04929, ACT_TPH, ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes | Back alignment and domain information |
|---|
| >gnl|CDD|153202 cd04930, ACT_TH, ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH) | Back alignment and domain information |
|---|
| >gnl|CDD|153139 cd02116, ACT, ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 406 | |||
| PRK10622 | 386 | pheA bifunctional chorismate mutase/prephenate deh | 100.0 | |
| PLN02317 | 382 | arogenate dehydratase | 100.0 | |
| COG0077 | 279 | PheA Prephenate dehydratase [Amino acid transport | 100.0 | |
| PRK11899 | 279 | prephenate dehydratase; Provisional | 100.0 | |
| PRK11898 | 283 | prephenate dehydratase; Provisional | 100.0 | |
| KOG2797 | 377 | consensus Prephenate dehydratase [Amino acid trans | 100.0 | |
| PF00800 | 181 | PDT: Prephenate dehydratase Caution this is only a | 100.0 | |
| PRK06034 | 279 | hypothetical protein; Provisional | 99.95 | |
| cd04904 | 74 | ACT_AAAH ACT domain of the nonheme iron-dependent, | 99.85 | |
| cd04931 | 90 | ACT_PAH ACT domain of the nonheme iron-dependent a | 99.83 | |
| cd04930 | 115 | ACT_TH ACT domain of the nonheme iron-dependent ar | 99.81 | |
| cd04929 | 74 | ACT_TPH ACT domain of the nonheme iron-dependent a | 99.81 | |
| cd04905 | 80 | ACT_CM-PDT C-terminal ACT domain of the bifunction | 99.81 | |
| cd04880 | 75 | ACT_AAAH-PDT-like ACT domain of the nonheme iron-d | 99.78 | |
| TIGR01268 | 436 | Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetra | 99.7 | |
| TIGR01270 | 464 | Trp_5_monoox tryptophan 5-monooxygenase, tetrameri | 99.57 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 99.32 | |
| TIGR01801 | 102 | CM_A chorismate mutase domain of gram positive Aro | 99.23 | |
| TIGR01807 | 76 | CM_P2 chorismate mutase domain of proteobacterial | 99.22 | |
| TIGR01799 | 83 | CM_T chorismate mutase domain of T-protein. This m | 99.17 | |
| TIGR01797 | 83 | CM_P_1 chorismate mutase domain of proteobacterial | 99.16 | |
| PRK07248 | 87 | hypothetical protein; Provisional | 99.15 | |
| TIGR01803 | 82 | CM-like chorismate mutase related enzymes. This su | 99.15 | |
| TIGR01805 | 81 | CM_mono_grmpos monofunctional chorismate mutase, g | 99.07 | |
| COG1605 | 101 | PheA Chorismate mutase [Amino acid transport and m | 99.04 | |
| PRK07075 | 101 | isochorismate-pyruvate lyase; Reviewed | 99.04 | |
| PRK06285 | 96 | chorismate mutase; Provisional | 99.03 | |
| TIGR01795 | 94 | CM_mono_cladeE monofunctional chorismate mutase, a | 99.01 | |
| PRK09239 | 104 | chorismate mutase; Provisional | 99.01 | |
| TIGR01791 | 83 | CM_archaeal chorismate mutase, archaeal type. This | 98.99 | |
| PRK12595 | 360 | bifunctional 3-deoxy-7-phosphoheptulonate synthase | 98.87 | |
| PRK06443 | 177 | chorismate mutase; Validated | 98.81 | |
| PF01817 | 81 | CM_2: Chorismate mutase type II; InterPro: IPR0208 | 98.78 | |
| TIGR01808 | 74 | CM_M_hiGC-arch monofunctional chorismate mutase, h | 98.74 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 98.73 | |
| PRK07857 | 106 | hypothetical protein; Provisional | 98.69 | |
| TIGR01269 | 457 | Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric. | 98.62 | |
| smart00830 | 79 | CM_2 Chorismate mutase type II. Chorismate mutase, | 98.49 | |
| KOG3820 | 461 | consensus Aromatic amino acid hydroxylase [Amino a | 98.42 | |
| cd04886 | 73 | ACT_ThrD-II-like C-terminal ACT domain of biodegra | 98.02 | |
| PF01842 | 66 | ACT: ACT domain; InterPro: IPR002912 The ACT domai | 98.01 | |
| TIGR01806 | 114 | CM_mono2 chorismate mutase, putative. This model r | 97.5 | |
| cd04882 | 65 | ACT_Bt0572_2 C-terminal ACT domain of a novel prot | 97.29 | |
| cd04884 | 72 | ACT_CBS C-terminal ACT domain of the cystathionine | 97.2 | |
| PRK06737 | 76 | acetolactate synthase 1 regulatory subunit; Valida | 97.19 | |
| cd04878 | 72 | ACT_AHAS N-terminal ACT domain of the Escherichia | 97.13 | |
| cd04874 | 72 | ACT_Af1403 N-terminal ACT domain of the yet unchar | 97.07 | |
| cd04883 | 72 | ACT_AcuB C-terminal ACT domain of the Bacillus sub | 97.05 | |
| PF13710 | 63 | ACT_5: ACT domain; PDB: 2FGC_A 2PC6_A 2F1F_B. | 96.91 | |
| PRK09269 | 193 | chorismate mutase; Provisional | 96.88 | |
| cd02116 | 60 | ACT ACT domains are commonly involved in specifica | 96.84 | |
| cd04888 | 76 | ACT_PheB-BS C-terminal ACT domain of a small (~147 | 96.74 | |
| PRK08055 | 181 | chorismate mutase; Provisional | 96.72 | |
| PF13291 | 80 | ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A. | 96.68 | |
| cd04902 | 73 | ACT_3PGDH-xct C-terminal ACT (regulatory) domain o | 96.55 | |
| cd04908 | 66 | ACT_Bt0572_1 N-terminal ACT domain of a novel prot | 96.51 | |
| TIGR00119 | 157 | acolac_sm acetolactate synthase, small subunit. ac | 96.48 | |
| cd04909 | 69 | ACT_PDH-BS C-terminal ACT domain of the monofuncti | 96.47 | |
| cd04903 | 71 | ACT_LSD C-terminal ACT domain of the L-serine dehy | 96.45 | |
| PRK11895 | 161 | ilvH acetolactate synthase 3 regulatory subunit; R | 96.45 | |
| PRK11152 | 76 | ilvM acetolactate synthase 2 regulatory subunit; P | 96.4 | |
| CHL00100 | 174 | ilvH acetohydroxyacid synthase small subunit | 96.3 | |
| cd04879 | 71 | ACT_3PGDH-like ACT_3PGDH-like CD includes the C-te | 96.25 | |
| cd04887 | 74 | ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-te | 96.11 | |
| PRK04435 | 147 | hypothetical protein; Provisional | 96.1 | |
| cd04885 | 68 | ACT_ThrD-I Tandem C-terminal ACT domains of threon | 96.09 | |
| PRK08178 | 96 | acetolactate synthase 1 regulatory subunit; Review | 95.97 | |
| PRK13562 | 84 | acetolactate synthase 1 regulatory subunit; Provis | 95.97 | |
| cd04896 | 75 | ACT_ACR-like_3 ACT domain-containing protein which | 95.86 | |
| cd04881 | 79 | ACT_HSDH-Hom ACT_HSDH_Hom CD includes the C-termin | 95.67 | |
| cd04901 | 69 | ACT_3PGDH C-terminal ACT (regulatory) domain of D- | 95.59 | |
| cd04872 | 88 | ACT_1ZPV ACT domain proteins similar to the yet un | 95.35 | |
| cd04906 | 85 | ACT_ThrD-I_1 First of two tandem C-terminal ACT do | 95.33 | |
| PRK00194 | 90 | hypothetical protein; Validated | 95.24 | |
| cd04926 | 72 | ACT_ACR_4 C-terminal ACT domain, of a novel type o | 95.2 | |
| cd04873 | 70 | ACT_UUR-ACR-like ACT domains of the bacterial sign | 95.13 | |
| PRK08198 | 404 | threonine dehydratase; Provisional | 95.11 | |
| PRK08577 | 136 | hypothetical protein; Provisional | 95.05 | |
| COG4492 | 150 | PheB ACT domain-containing protein [General functi | 94.94 | |
| cd04870 | 75 | ACT_PSP_1 CT domains found N-terminal of phosphose | 94.94 | |
| cd04876 | 71 | ACT_RelA-SpoT ACT domain found C-terminal of the R | 94.94 | |
| cd04877 | 74 | ACT_TyrR N-terminal ACT domain of the TyrR protein | 94.75 | |
| cd04875 | 74 | ACT_F4HF-DF N-terminal ACT domain of formyltetrahy | 94.75 | |
| PF13740 | 76 | ACT_6: ACT domain; PDB: 1ZPV_A 3P96_A 1U8S_A. | 94.71 | |
| cd04899 | 70 | ACT_ACR-UUR-like_2 C-terminal ACT domains of the b | 94.67 | |
| cd04889 | 56 | ACT_PDH-BS-like C-terminal ACT domain of the monof | 94.62 | |
| TIGR01127 | 380 | ilvA_1Cterm threonine dehydratase, medium form. A | 94.43 | |
| COG2061 | 170 | ACT-domain-containing protein, predicted allosteri | 94.2 | |
| cd04895 | 72 | ACT_ACR_1 ACT domain-containing protein which is c | 93.99 | |
| PRK06382 | 406 | threonine dehydratase; Provisional | 93.81 | |
| PRK08526 | 403 | threonine dehydratase; Provisional | 93.7 | |
| cd04869 | 81 | ACT_GcvR_2 ACT domains that comprise the Glycine C | 93.39 | |
| PRK08639 | 420 | threonine dehydratase; Validated | 92.68 | |
| PRK07334 | 403 | threonine dehydratase; Provisional | 91.83 | |
| TIGR01124 | 499 | ilvA_2Cterm threonine ammonia-lyase, biosynthetic, | 91.09 | |
| cd04893 | 77 | ACT_GcvR_1 ACT domains that comprise the Glycine C | 91.08 | |
| cd04900 | 73 | ACT_UUR-like_1 ACT domain family, ACT_UUR-like_1, | 90.95 | |
| COG1707 | 218 | ACT domain-containing protein [General function pr | 90.84 | |
| cd04935 | 75 | ACT_AKiii-DAPDC_1 ACT domains of a bifunctional AK | 89.9 | |
| PRK11589 | 190 | gcvR glycine cleavage system transcriptional repre | 89.28 | |
| cd04897 | 75 | ACT_ACR_3 ACT domain-containing protein which is c | 89.07 | |
| COG2716 | 176 | GcvR Glycine cleavage system regulatory protein [A | 89.05 | |
| COG0440 | 163 | IlvH Acetolactate synthase, small (regulatory) sub | 88.88 | |
| TIGR02079 | 409 | THD1 threonine dehydratase. This model represents | 88.82 | |
| COG4747 | 142 | ACT domain-containing protein [General function pr | 86.91 | |
| cd04932 | 75 | ACT_AKiii-LysC-EC_1 ACT domains located C-terminal | 86.81 | |
| PLN02550 | 591 | threonine dehydratase | 86.61 | |
| COG3830 | 90 | ACT domain-containing protein [Signal transduction | 86.3 | |
| cd04927 | 76 | ACT_ACR-like_2 Second ACT domain, of a novel type | 86.04 | |
| cd04912 | 75 | ACT_AKiii-LysC-EC-like_1 ACT domains located C-ter | 85.01 | |
| PRK09224 | 504 | threonine dehydratase; Reviewed | 84.3 | |
| cd04934 | 73 | ACT_AK-Hom3_1 CT domains located C-terminal to the | 84.11 | |
| cd04907 | 81 | ACT_ThrD-I_2 Second of two tandem C-terminal ACT d | 83.85 | |
| PRK06349 | 426 | homoserine dehydrogenase; Provisional | 83.72 | |
| PRK13011 | 286 | formyltetrahydrofolate deformylase; Reviewed | 83.63 | |
| PRK12483 | 521 | threonine dehydratase; Reviewed | 82.92 | |
| cd08417 | 200 | PBP2_Nitroaromatics_like The C-terminal substrate | 82.88 | |
| cd04891 | 61 | ACT_AK-LysC-DapG-like_1 ACT domains of the lysine- | 81.0 |
| >PRK10622 pheA bifunctional chorismate mutase/prephenate dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-93 Score=725.05 Aligned_cols=357 Identities=30% Similarity=0.471 Sum_probs=323.7
Q ss_pred CCCchhhhhHHhhhcccchHHHHHhhhhcccccccccC--C-----C-CCCchhhHHHHHhhhhc-cCCCCccccccccc
Q 015464 25 VPNRCGFGLDLRVLNKWECTCVGVLAQTHRAITPVEDD--R-----P-YTPDVQSSEANERSQDS-QSSGFHKDLNLLPT 95 (406)
Q Consensus 25 ~~~l~~lR~~ID~iD~~~~~l~~Ll~~~~R~~~~~~v~--K-----~-~~P~RE~a~i~~rl~~~-~~~~l~~d~i~l~~ 95 (406)
..+|+++|.+||+||.+ |++||+| |++++.+|| | | |+|+|| +++++|+... ..++++++.++
T Consensus 4 ~~~L~~lR~~ID~ID~~---ii~Ll~~--R~~~~~~I~~~K~~~~~pi~dp~RE-~~vl~~~~~~a~~~~l~~~~i~--- 74 (386)
T PRK10622 4 ENPLLALREKISALDEK---LLALLAE--RRELAVEVAKAKLLSHRPVRDIDRE-RDLLERLITLGKAHHLDAHYIT--- 74 (386)
T ss_pred hhHHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHHHhCCCCCcChHHH-HHHHHHHHHhcccCCCCHHHHH---
Confidence 45799999999999999 9999999 999999999 4 6 999999 7777777664 45899999999
Q ss_pred hhcccccccccccccCC---C--CCCCCccEEEEEcCCCcHHHHHHHHHCCC----CceeccCCHHHHHHHHHcCCccEE
Q 015464 96 LVYGQIAEPLSIMELSS---S--PDDGTKVRVAYQGLPGAYSEAAARKAYPK----CETVPCDQFEAAFKAVELWLVDKA 166 (406)
Q Consensus 96 ~I~ReImr~~~~~eis~---~--~~~~~~~~Va~lGp~Gs~s~~AA~~~f~~----~~~~~~~s~~~v~~aV~~g~~d~g 166 (406)
.||+.||..|...|... . .......+||||||+|||||+||+++|+. ...++|.||++||++|++|++|+|
T Consensus 75 ~if~~ii~~S~~~Q~~~~~~~~~~~~~~~~~va~lGp~GtfSh~Aa~~~~~~~~~~~~~~~~~s~~~v~~av~~g~~d~g 154 (386)
T PRK10622 75 RLFQLIIEDSVLTQQALLQQHLNKTNPHSARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYA 154 (386)
T ss_pred HHHHHHHHHHHHHhhhhhhccccccccccceEEEECCCCcHHHHHHHHhhccccccccccCCCCHHHHHHHHHCCCCCEE
Confidence 99999998876544311 0 11124578999999999999999988863 223489999999999999999999
Q ss_pred EEeeecccccccccccchhccCCeEEEEEEEEeeeeEeecCCCCCccCccEEEechHHHHHHHHHHhh-cCCeEEeccCH
Q 015464 167 VLPIENSVGGSIHRNYDLLLRHRLHIVGEVQLVVNHCLLGLPGVLKEELKRVFSHPQALAQCEMTLSN-LGIVRISADDT 245 (406)
Q Consensus 167 vVPIENS~~G~V~~t~DlL~~~~l~I~gE~~l~I~h~L~~~~g~~l~~I~~VySHpqal~QC~~~L~~-~~~~~i~~~sT 245 (406)
|||||||++|+|.+|||+|.+++++|+||+.+||+|||++.+|.++++|++||||||||+||++||++ |+++.++++||
T Consensus 155 VvPiENS~~G~V~~t~DlL~~~~l~I~~E~~l~I~h~Ll~~~~~~l~~I~~V~SHpqal~QC~~fL~~~p~~~~~~~~sT 234 (386)
T PRK10622 155 VLPIENTSSGAINDVYDLLQHTSLSIVGEMTLPIDHCVLVSGTTDLSTIETVYSHPQPFQQCSQFLNRYPHWKIEYTEST 234 (386)
T ss_pred EEEEecCCceehHHHHHHHhcCCCEEEEEEEEEEEEEEecCCCCCHHHCeEEEEehHHHHHHHHHHHHCCCceEEEcCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 58999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCHHhHHHcCCceeecCccCCCCCeeEEEEEecCCCCCCCCCCceEEEEEEeCCCcchHHHH
Q 015464 246 AGAAQMVASIGERDTGAVASAQAAEIYGLDILAEKIQDDDDNVTRFLILAREPIIAGTDRPYKTSIVFTLEEGPGMLFKA 325 (406)
Q Consensus 246 A~Aa~~v~~~~~~~~AAIas~~aA~~ygL~il~~~I~d~~~N~TRF~vi~~~~~~~~~~~~~ktsi~f~~~~~pGaL~~~ 325 (406)
|+||+.|++.++++.|||||+.||++|||+||+++|||.++|+|||+||++++..+....++||||+|+++|+||+|+++
T Consensus 235 a~Aa~~v~~~~~~~~AAI~s~~aa~~ygL~vl~~~I~D~~~N~TRF~vi~~~~~~~~~~~~~ktsl~~~~~~~pGaL~~~ 314 (386)
T PRK10622 235 AAAMEKVAQANSPHVAALGSEAGGALYGLQVLERNLANQQQNITRFIVLARKAINVSDQVPAKTTLLMATGQQAGALVEA 314 (386)
T ss_pred HHHHHHHHhcCCCCEEEECCHHHHHHcCCcChhhcCcCCccccceEEEEecCCCCCCCCCCCcEEEEEEcCCCCcHHHHH
Confidence 99999999887778999999999999999999999999999999999999987433333457999999999999999999
Q ss_pred HHHHHhCCceeeeeEeeeCCCCCCccccCCCCCCCccceEEEEEEEecCCCcHHHHHHHHHHHHcCCceEEEccccCCC
Q 015464 326 LAVFALRDINLTKIESRPQRKRPLRVVDDSNKGSAKYFDYLFYIDFEASMADPRAQFALGHLQEFATFLRVLGCYPMDT 404 (406)
Q Consensus 326 L~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~g~~~~~~Y~Ffid~e~~~~~~~~~~al~~L~~~~~~vrvLGsYp~~~ 404 (406)
|++|+.+|||||||||||+++++ |+|.||||++|+..++.++++|++|++.|.++|+|||||...
T Consensus 315 L~~Fa~~giNLtkIeSRP~~~~~--------------~~Y~Ffid~eg~~~d~~~~~aL~~l~~~~~~~kvLGsYp~~~ 379 (386)
T PRK10622 315 LLVLRNHNLIMTKLESRPIHGNP--------------WEEMFYLDVQANLRSAEMQKALKELGEITRSLKVLGCYPSEN 379 (386)
T ss_pred HHHHHHcCCCeeEEEeeecCCCC--------------ceEEEEEEEeCCCCCHHHHHHHHHHHHhcCcEEEeeeecCCc
Confidence 99999999999999999999876 999999999999999999999999999999999999999764
|
|
| >PLN02317 arogenate dehydratase | Back alignment and domain information |
|---|
| >COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK11899 prephenate dehydratase; Provisional | Back alignment and domain information |
|---|
| >PRK11898 prephenate dehydratase; Provisional | Back alignment and domain information |
|---|
| >KOG2797 consensus Prephenate dehydratase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF00800 PDT: Prephenate dehydratase Caution this is only a partial structure | Back alignment and domain information |
|---|
| >PRK06034 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) | Back alignment and domain information |
|---|
| >cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH) | Back alignment and domain information |
|---|
| >cd04930 ACT_TH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH) | Back alignment and domain information |
|---|
| >cd04929 ACT_TPH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes | Back alignment and domain information |
|---|
| >cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme | Back alignment and domain information |
|---|
| >cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH) | Back alignment and domain information |
|---|
| >TIGR01268 Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetrameric form | Back alignment and domain information |
|---|
| >TIGR01270 Trp_5_monoox tryptophan 5-monooxygenase, tetrameric | Back alignment and domain information |
|---|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >TIGR01801 CM_A chorismate mutase domain of gram positive AroA protein | Back alignment and domain information |
|---|
| >TIGR01807 CM_P2 chorismate mutase domain of proteobacterial P-protein, clade 2 | Back alignment and domain information |
|---|
| >TIGR01799 CM_T chorismate mutase domain of T-protein | Back alignment and domain information |
|---|
| >TIGR01797 CM_P_1 chorismate mutase domain of proteobacterial P-protein, clade 1 | Back alignment and domain information |
|---|
| >PRK07248 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01803 CM-like chorismate mutase related enzymes | Back alignment and domain information |
|---|
| >TIGR01805 CM_mono_grmpos monofunctional chorismate mutase, gram positive-type, clade 2 | Back alignment and domain information |
|---|
| >COG1605 PheA Chorismate mutase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK07075 isochorismate-pyruvate lyase; Reviewed | Back alignment and domain information |
|---|
| >PRK06285 chorismate mutase; Provisional | Back alignment and domain information |
|---|
| >TIGR01795 CM_mono_cladeE monofunctional chorismate mutase, alpha proteobacterial type | Back alignment and domain information |
|---|
| >PRK09239 chorismate mutase; Provisional | Back alignment and domain information |
|---|
| >TIGR01791 CM_archaeal chorismate mutase, archaeal type | Back alignment and domain information |
|---|
| >PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed | Back alignment and domain information |
|---|
| >PRK06443 chorismate mutase; Validated | Back alignment and domain information |
|---|
| >PF01817 CM_2: Chorismate mutase type II; InterPro: IPR020822 Chorismate mutase, 5 | Back alignment and domain information |
|---|
| >TIGR01808 CM_M_hiGC-arch monofunctional chorismate mutase, high GC gram positive type | Back alignment and domain information |
|---|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK07857 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01269 Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric | Back alignment and domain information |
|---|
| >smart00830 CM_2 Chorismate mutase type II | Back alignment and domain information |
|---|
| >KOG3820 consensus Aromatic amino acid hydroxylase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd04886 ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains | Back alignment and domain information |
|---|
| >PF01842 ACT: ACT domain; InterPro: IPR002912 The ACT domain is found in a variety of contexts and is proposed to be a conserved regulatory binding fold | Back alignment and domain information |
|---|
| >TIGR01806 CM_mono2 chorismate mutase, putative | Back alignment and domain information |
|---|
| >cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains | Back alignment and domain information |
|---|
| >cd04884 ACT_CBS C-terminal ACT domain of the cystathionine beta-synthase (CBS) domain protein found in Thermotoga maritima, Tm0935, and delta proteobacteria | Back alignment and domain information |
|---|
| >PRK06737 acetolactate synthase 1 regulatory subunit; Validated | Back alignment and domain information |
|---|
| >cd04878 ACT_AHAS N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS) | Back alignment and domain information |
|---|
| >cd04874 ACT_Af1403 N-terminal ACT domain of the yet uncharacterized, small (~133 a | Back alignment and domain information |
|---|
| >cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB | Back alignment and domain information |
|---|
| >PF13710 ACT_5: ACT domain; PDB: 2FGC_A 2PC6_A 2F1F_B | Back alignment and domain information |
|---|
| >PRK09269 chorismate mutase; Provisional | Back alignment and domain information |
|---|
| >cd02116 ACT ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme | Back alignment and domain information |
|---|
| >cd04888 ACT_PheB-BS C-terminal ACT domain of a small (~147 a | Back alignment and domain information |
|---|
| >PRK08055 chorismate mutase; Provisional | Back alignment and domain information |
|---|
| >PF13291 ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A | Back alignment and domain information |
|---|
| >cd04902 ACT_3PGDH-xct C-terminal ACT (regulatory) domain of D-3-phosphoglycerate dehydrogenase (3PGDH) | Back alignment and domain information |
|---|
| >cd04908 ACT_Bt0572_1 N-terminal ACT domain of a novel protein composed almost entirely of two tandem ACT domains | Back alignment and domain information |
|---|
| >TIGR00119 acolac_sm acetolactate synthase, small subunit | Back alignment and domain information |
|---|
| >cd04909 ACT_PDH-BS C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH) | Back alignment and domain information |
|---|
| >cd04903 ACT_LSD C-terminal ACT domain of the L-serine dehydratase (LSD), iron-sulfur-dependent, beta subunit | Back alignment and domain information |
|---|
| >PRK11895 ilvH acetolactate synthase 3 regulatory subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK11152 ilvM acetolactate synthase 2 regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >CHL00100 ilvH acetohydroxyacid synthase small subunit | Back alignment and domain information |
|---|
| >cd04879 ACT_3PGDH-like ACT_3PGDH-like CD includes the C-terminal ACT (regulatory) domain of D-3-phosphoglycerate dehydrogenase (3PGDH) | Back alignment and domain information |
|---|
| >cd04887 ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-terminal ACT domain of putative NAD-dependent malic enzyme 1, Bacillus subtilis YqkI and related domains | Back alignment and domain information |
|---|
| >PRK04435 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd04885 ACT_ThrD-I Tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) | Back alignment and domain information |
|---|
| >PRK08178 acetolactate synthase 1 regulatory subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK13562 acetolactate synthase 1 regulatory subunit; Provisional | Back alignment and domain information |
|---|
| >cd04896 ACT_ACR-like_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) | Back alignment and domain information |
|---|
| >cd04881 ACT_HSDH-Hom ACT_HSDH_Hom CD includes the C-terminal ACT domain of the NAD(P)H-dependent, homoserine dehydrogenase (HSDH) and related domains | Back alignment and domain information |
|---|
| >cd04901 ACT_3PGDH C-terminal ACT (regulatory) domain of D-3-Phosphoglycerate Dehydrogenase (3PGDH) found in fungi and bacteria | Back alignment and domain information |
|---|
| >cd04872 ACT_1ZPV ACT domain proteins similar to the yet uncharacterized Streptococcus pneumoniae ACT domain protein | Back alignment and domain information |
|---|
| >cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) | Back alignment and domain information |
|---|
| >PRK00194 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >cd04926 ACT_ACR_4 C-terminal ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) | Back alignment and domain information |
|---|
| >cd04873 ACT_UUR-ACR-like ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD | Back alignment and domain information |
|---|
| >PRK08198 threonine dehydratase; Provisional | Back alignment and domain information |
|---|
| >PRK08577 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG4492 PheB ACT domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd04870 ACT_PSP_1 CT domains found N-terminal of phosphoserine phosphatase (PSP, SerB) | Back alignment and domain information |
|---|
| >cd04876 ACT_RelA-SpoT ACT domain found C-terminal of the RelA/SpoT domains | Back alignment and domain information |
|---|
| >cd04877 ACT_TyrR N-terminal ACT domain of the TyrR protein | Back alignment and domain information |
|---|
| >cd04875 ACT_F4HF-DF N-terminal ACT domain of formyltetrahydrofolate deformylase (F4HF-DF; formyltetrahydrofolate hydrolase) | Back alignment and domain information |
|---|
| >PF13740 ACT_6: ACT domain; PDB: 1ZPV_A 3P96_A 1U8S_A | Back alignment and domain information |
|---|
| >cd04899 ACT_ACR-UUR-like_2 C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains | Back alignment and domain information |
|---|
| >cd04889 ACT_PDH-BS-like C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH) enzyme that catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate | Back alignment and domain information |
|---|
| >TIGR01127 ilvA_1Cterm threonine dehydratase, medium form | Back alignment and domain information |
|---|
| >COG2061 ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd04895 ACT_ACR_1 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) | Back alignment and domain information |
|---|
| >PRK06382 threonine dehydratase; Provisional | Back alignment and domain information |
|---|
| >PRK08526 threonine dehydratase; Provisional | Back alignment and domain information |
|---|
| >cd04869 ACT_GcvR_2 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains | Back alignment and domain information |
|---|
| >PRK08639 threonine dehydratase; Validated | Back alignment and domain information |
|---|
| >PRK07334 threonine dehydratase; Provisional | Back alignment and domain information |
|---|
| >TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form | Back alignment and domain information |
|---|
| >cd04893 ACT_GcvR_1 ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein, and other related domains | Back alignment and domain information |
|---|
| >cd04900 ACT_UUR-like_1 ACT domain family, ACT_UUR-like_1, includes the first of two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains | Back alignment and domain information |
|---|
| >COG1707 ACT domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd04935 ACT_AKiii-DAPDC_1 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein | Back alignment and domain information |
|---|
| >PRK11589 gcvR glycine cleavage system transcriptional repressor; Provisional | Back alignment and domain information |
|---|
| >cd04897 ACT_ACR_3 ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) | Back alignment and domain information |
|---|
| >COG2716 GcvR Glycine cleavage system regulatory protein [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG0440 IlvH Acetolactate synthase, small (regulatory) subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02079 THD1 threonine dehydratase | Back alignment and domain information |
|---|
| >COG4747 ACT domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd04932 ACT_AKiii-LysC-EC_1 ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII | Back alignment and domain information |
|---|
| >PLN02550 threonine dehydratase | Back alignment and domain information |
|---|
| >COG3830 ACT domain-containing protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd04927 ACT_ACR-like_2 Second ACT domain, of a novel type of ACT domain-containing protein which is composed almost entirely of four ACT domain repeats (the "ACR" protein) | Back alignment and domain information |
|---|
| >cd04912 ACT_AKiii-LysC-EC-like_1 ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII | Back alignment and domain information |
|---|
| >PRK09224 threonine dehydratase; Reviewed | Back alignment and domain information |
|---|
| >cd04934 ACT_AK-Hom3_1 CT domains located C-terminal to the catalytic domain of the aspartokinase (AK) HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae, and other related ACT domains | Back alignment and domain information |
|---|
| >cd04907 ACT_ThrD-I_2 Second of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) | Back alignment and domain information |
|---|
| >PRK06349 homoserine dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK13011 formyltetrahydrofolate deformylase; Reviewed | Back alignment and domain information |
|---|
| >PRK12483 threonine dehydratase; Reviewed | Back alignment and domain information |
|---|
| >cd08417 PBP2_Nitroaromatics_like The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold | Back alignment and domain information |
|---|
| >cd04891 ACT_AK-LysC-DapG-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII and related proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 406 | ||||
| 2qmx_B | 283 | The Crystal Structure Of L-Phe Inhibited Prephenate | 4e-61 | ||
| 3mwb_A | 313 | The Crystal Structure Of Prephenate Dehydratase In | 1e-25 | ||
| 2qmw_A | 267 | The Crystal Structure Of The Prephenate Dehydratase | 1e-15 | ||
| 3luy_A | 329 | Putative Chorismate Mutase From Bifidobacterium Ado | 3e-06 | ||
| 1phz_A | 429 | Structure Of Phosphorylated Phenylalanine Hydroxyla | 2e-04 |
| >pdb|2QMX|B Chain B, The Crystal Structure Of L-Phe Inhibited Prephenate Dehydratase From Chlorobium Tepidum Tls Length = 283 | Back alignment and structure |
|
| >pdb|3MWB|A Chain A, The Crystal Structure Of Prephenate Dehydratase In Complex With L-Phe From Arthrobacter Aurescens To 2.0a Length = 313 | Back alignment and structure |
| >pdb|2QMW|A Chain A, The Crystal Structure Of The Prephenate Dehydratase (Pdt) From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 267 | Back alignment and structure |
| >pdb|3LUY|A Chain A, Putative Chorismate Mutase From Bifidobacterium Adolescentis Length = 329 | Back alignment and structure |
| >pdb|1PHZ|A Chain A, Structure Of Phosphorylated Phenylalanine Hydroxylase Length = 429 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls} Length = 283 | Back alignment and structure |
|---|
Score = 415 bits (1070), Expect = e-146
Identities = 136/293 (46%), Positives = 173/293 (59%), Gaps = 25/293 (8%)
Query: 118 TKVRVAYQGLPGAYSEAAARKAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGGS 177
T +AYQG PGAYSE AA + E +PC+ F+ F AV D AV+PIENS+GGS
Sbjct: 5 TNWLIAYQGEPGAYSEIAALRF---GEPLPCESFDDVFSAVTEQKADYAVIPIENSLGGS 61
Query: 178 IHRNYDLLLRHRLHIVGEVQLVVNHCLLGLPGVLKEELKRVFSHPQALAQCEMTLS-NLG 236
IH+NYDLLLR + I+ E + V HCLLGLPG E + SHPQAL QC + +
Sbjct: 62 IHQNYDLLLRRPVVILAETFVKVEHCLLGLPGASVETATKAMSHPQALVQCHNFFATHPQ 121
Query: 237 IVRISADDTAGAAQMVASIGERDTGAVASAQAAEIYGLDILAEKIQDDDDNVTRFLILAR 296
I +A DTAG+A+MVA ++ A+AS +A E+YGLDIL E + D++ N+TRF +A
Sbjct: 122 IRAEAAYDTAGSAKMVAESRDKSALAIASKRAGELYGLDILKENLADEEWNITRFFCIAH 181
Query: 297 EPIIAGTDRP-------YKTSIVFTLEEGPGMLFKALAVFALRDINLTKIESRPQRKRPL 349
E + KTSIVF L G LF+ALA FALR I+LTKIESRP RK+
Sbjct: 182 ENNPDISHLKVRPDVARQKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKA- 240
Query: 350 RVVDDSNKGSAKYFDYLFYIDFEASMADPRAQFALGHLQEFATFLRVLGCYPM 402
F+YLFY DF D AL +L+EFAT ++VLG Y +
Sbjct: 241 -------------FEYLFYADFIGHREDQNVHNALENLREFATMVKVLGSYGV 280
|
| >3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens} Length = 313 | Back alignment and structure |
|---|
| >2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3 Length = 267 | Back alignment and structure |
|---|
| >3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis} Length = 329 | Back alignment and structure |
|---|
| >1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A Length = 429 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 406 | |||
| 2qmx_A | 283 | Prephenate dehydratase; APC86053, L-Phe inhibition | 100.0 | |
| 3mwb_A | 313 | Prephenate dehydratase; L-Phe, PSI, MCSG, structur | 100.0 | |
| 2qmw_A | 267 | PDT, prephenate dehydratase; APC85812, prephenate | 100.0 | |
| 3luy_A | 329 | Probable chorismate mutase; structural genomics, A | 100.0 | |
| 1phz_A | 429 | Protein (phenylalanine hydroxylase); aromatic amin | 99.82 | |
| 2d8d_A | 90 | Aroag, phospho-2-dehydro-3-deoxyheptonate aldolase | 99.28 | |
| 1ecm_A | 109 | Endo-oxabicyclic transition state analogue; P-prot | 99.22 | |
| 3ret_A | 101 | Salicylate biosynthesis protein PCHB; intertwined | 99.21 | |
| 3rmi_A | 114 | Chorismate mutase protein; emerald biostructures, | 99.11 | |
| 3nvt_A | 385 | 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; | 99.05 | |
| 2gtv_X | 104 | CM, chorismate mutase; four-helix bundle, isomeras | 99.03 | |
| 2vkl_A | 90 | RV0948C/MT0975; helical, intracellular, chorismate | 98.95 | |
| 1ybz_A | 91 | Chorismate mutase; conserved hypothetical protein, | 98.91 | |
| 2gbb_A | 156 | Putative chorismate mutase; alpha helical bundle, | 97.78 | |
| 2fp1_A | 166 | Chorismate mutase; alpha-helical, isomerase; 1.55A | 97.7 | |
| 2ko1_A | 88 | CTR148A, GTP pyrophosphokinase; homodimer, alpha+b | 96.83 | |
| 1zpv_A | 91 | ACT domain protein; structural genomics, PSI, prot | 96.59 | |
| 2f1f_A | 164 | Acetolactate synthase isozyme III small subunit; f | 96.26 | |
| 2pc6_A | 165 | Probable acetolactate synthase isozyme III (small; | 95.95 | |
| 2fgc_A | 193 | Acetolactate synthase, small subunit; regulatory s | 95.91 | |
| 1y7p_A | 223 | Hypothetical protein AF1403; structural genomics, | 93.48 | |
| 2jhe_A | 190 | Transcription regulator TYRR; aromatic hydrocarbon | 92.66 | |
| 1u8s_A | 192 | Glycine cleavage system transcriptional repressor, | 91.99 | |
| 2f06_A | 144 | Conserved hypothetical protein; structural genomic | 91.42 | |
| 2f06_A | 144 | Conserved hypothetical protein; structural genomic | 91.19 | |
| 1wdn_A | 226 | GLNBP, glutamine binding protein; closed form, com | 89.68 | |
| 3mpk_A | 267 | Virulence sensor protein BVGS; venus flytrap, sens | 87.53 | |
| 4f3p_A | 249 | Glutamine-binding periplasmic protein; ssgcid, str | 87.38 | |
| 3h7m_A | 234 | Sensor protein; histidine kinase sensor domain, ki | 87.31 | |
| 2nyi_A | 195 | Unknown protein; protein structure initiative, PSI | 85.98 | |
| 3k4u_A | 245 | Binding component of ABC transporter; structural g | 85.86 | |
| 3kzg_A | 237 | Arginine 3RD transport system periplasmic binding | 85.38 | |
| 3lou_A | 292 | Formyltetrahydrofolate deformylase; structural gen | 84.58 | |
| 1xt8_A | 292 | Putative amino-acid transporter periplasmic solut | 84.46 | |
| 3o1l_A | 302 | Formyltetrahydrofolate deformylase; structural gen | 82.63 | |
| 3obi_A | 288 | Formyltetrahydrofolate deformylase; structural gen | 82.29 | |
| 3k5p_A | 416 | D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, | 82.22 | |
| 4h5g_A | 243 | Amino acid ABC superfamily ATP binding cassette tr | 81.58 | |
| 1u8s_A | 192 | Glycine cleavage system transcriptional repressor, | 81.09 | |
| 1sc6_A | 404 | PGDH, D-3-phosphoglycerate dehydrogenase; alloster | 80.01 |
| >2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-86 Score=644.68 Aligned_cols=268 Identities=50% Similarity=0.760 Sum_probs=255.4
Q ss_pred ccEEEEEcCCCcHHHHHHHHHCCCCceeccCCHHHHHHHHHcCCccEEEEeeecccccccccccchhccCCeEEEEEEEE
Q 015464 119 KVRVAYQGLPGAYSEAAARKAYPKCETVPCDQFEAAFKAVELWLVDKAVLPIENSVGGSIHRNYDLLLRHRLHIVGEVQL 198 (406)
Q Consensus 119 ~~~Va~lGp~Gs~s~~AA~~~f~~~~~~~~~s~~~v~~aV~~g~~d~gvVPIENS~~G~V~~t~DlL~~~~l~I~gE~~l 198 (406)
.++||||||+|||||+||+++| +.++|.||++||++|++|++||||||||||++|+|.+|||+|.+++++|+||+.+
T Consensus 6 ~~~iaylGp~Gtfs~~Aa~~~f---~~~p~~s~~~vf~aV~~g~~d~gVvPiENS~~G~V~~t~DlL~~~~l~I~gE~~l 82 (283)
T 2qmx_A 6 NWLIAYQGEPGAYSEIAALRFG---EPLPCESFDDVFSAVTEQKADYAVIPIENSLGGSIHQNYDLLLRRPVVILAETFV 82 (283)
T ss_dssp CCEEEEESCTTSHHHHHHHHHS---EEEEESCHHHHHHHHHTTSCSEEEEEEEESSSCBCHHHHHHHHHSSEEEEEEEEE
T ss_pred CcEEEEECCCCCHHHHHHHHHh---HhCcCCCHHHHHHHHHCCCCCEEEEeehhcCCCccHHHHHHhhcCCcEEEEEEEE
Confidence 4689999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeEeecCCCCCccCccEEEechHHHHHHHHHHhh-cCCeEEeccCHHHHHHHHHhcCCCCeEEEcCHHhHHHcCCcee
Q 015464 199 VVNHCLLGLPGVLKEELKRVFSHPQALAQCEMTLSN-LGIVRISADDTAGAAQMVASIGERDTGAVASAQAAEIYGLDIL 277 (406)
Q Consensus 199 ~I~h~L~~~~g~~l~~I~~VySHpqal~QC~~~L~~-~~~~~i~~~sTA~Aa~~v~~~~~~~~AAIas~~aA~~ygL~il 277 (406)
||+|||++++|.++++|++||||||||+||++||++ |+++.+++.|||+||++|+++++++.|||||+.||++|||+||
T Consensus 83 ~I~h~Ll~~~g~~l~~I~~V~SHpqal~QC~~~L~~~p~~~~~~~~sTA~AA~~va~~~~~~~AAIas~~AA~~ygL~il 162 (283)
T 2qmx_A 83 KVEHCLLGLPGASVETATKAMSHPQALVQCHNFFATHPQIRAEAAYDTAGSAKMVAESRDKSALAIASKRAGELYGLDIL 162 (283)
T ss_dssp ECCCEEEECSSCCTTTCCEEEECHHHHHHTHHHHHHCTTSEEEECSCHHHHHHHHHHTTCTTEEEEECHHHHHHTTCEEE
T ss_pred eeeeeEecCCCCChhhCCEEEEeHHHHHHHHHHHHHCCCceEEEcCCHHHHHHHHHhCCCCCeEEeCCHHHHHHcCCcee
Confidence 999999999999999999999999999999999999 5999999999999999999987788999999999999999999
Q ss_pred ecCccCCCCCeeEEEEEecCCCCC-------CCCCCceEEEEEEeCCCcchHHHHHHHHHhCCceeeeeEeeeCCCCCCc
Q 015464 278 AEKIQDDDDNVTRFLILAREPIIA-------GTDRPYKTSIVFTLEEGPGMLFKALAVFALRDINLTKIESRPQRKRPLR 350 (406)
Q Consensus 278 ~~~I~d~~~N~TRF~vi~~~~~~~-------~~~~~~ktsi~f~~~~~pGaL~~~L~~Fa~~~INLtkIESRP~~~~p~~ 350 (406)
++||||+++|+|||+||+|++... ..++.+||||+|+++|+||+|+++|++|+.+|||||||||||+++++
T Consensus 163 ~~~I~D~~~N~TRF~vl~~~~~~~~~~~~~~~~~~~~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~-- 240 (283)
T 2qmx_A 163 KENLADEEWNITRFFCIAHENNPDISHLKVRPDVARQKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKA-- 240 (283)
T ss_dssp ESSCSSCCCCEEEEEEEEETTCCCCTTSSSCCEEEEEEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSST--
T ss_pred cccCcCCCCCeeeEEEEecCccccccccccCCCCCCceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCC--
Confidence 999999999999999999986430 12236899999999999999999999999999999999999999875
Q ss_pred cccCCCCCCCccceEEEEEEEecCCCcHHHHHHHHHHHHcCCceEEEccccCC
Q 015464 351 VVDDSNKGSAKYFDYLFYIDFEASMADPRAQFALGHLQEFATFLRVLGCYPMD 403 (406)
Q Consensus 351 ~~~~~~~g~~~~~~Y~Ffid~e~~~~~~~~~~al~~L~~~~~~vrvLGsYp~~ 403 (406)
|+|.|||||+||.+|++++++|++|++.+.++|+|||||..
T Consensus 241 ------------~~Y~FfvD~eg~~~d~~v~~aL~~L~~~~~~~kiLGsYp~~ 281 (283)
T 2qmx_A 241 ------------FEYLFYADFIGHREDQNVHNALENLREFATMVKVLGSYGVV 281 (283)
T ss_dssp ------------TEEEEEEEEESCTTSHHHHHHHHHHHTTCSEEEEEEEEEEE
T ss_pred ------------cceEEEEEEecCCCcHHHHHHHHHHHHhcCeEEEeeeeeCC
Confidence 99999999999999999999999999999999999999965
|
| >3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens} | Back alignment and structure |
|---|
| >2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3 | Back alignment and structure |
|---|
| >3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis} | Back alignment and structure |
|---|
| >1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A | Back alignment and structure |
|---|
| >2d8d_A Aroag, phospho-2-dehydro-3-deoxyheptonate aldolase/chori mutase; chorismate, dimer, structural genomics, NPPSFA; 1.15A {Thermus thermophilus} SCOP: a.130.1.1 PDB: 2d8e_A | Back alignment and structure |
|---|
| >1ecm_A Endo-oxabicyclic transition state analogue; P-protein, chorismate mutase domain, chorismate mutase; HET: TSA; 2.20A {Escherichia coli} SCOP: a.130.1.1 | Back alignment and structure |
|---|
| >3ret_A Salicylate biosynthesis protein PCHB; intertwined dimer, lyase, mutase; HET: SAL; 1.79A {Pseudomonas aeruginosa} SCOP: a.130.1.1 PDB: 2h9d_A 3rem_A* 3hgx_A* 3hgw_C 2h9c_A | Back alignment and structure |
|---|
| >3rmi_A Chorismate mutase protein; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid; 2.40A {Bartonella henselae} | Back alignment and structure |
|---|
| >3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A* | Back alignment and structure |
|---|
| >2gtv_X CM, chorismate mutase; four-helix bundle, isomerase; HET: TSA; NMR {Methanocaldococcus jannaschii} SCOP: a.130.1.3 | Back alignment and structure |
|---|
| >2vkl_A RV0948C/MT0975; helical, intracellular, chorismate mutase, isomerase; 1.65A {Mycobacterium tuberculosis} PDB: 2qbv_A 2w19_C 2w1a_C* | Back alignment and structure |
|---|
| >1ybz_A Chorismate mutase; conserved hypothetical protein, hyperthermophIle, structural genomics, PSI, protein structu initiative; 1.82A {Pyrococcus furiosus} SCOP: a.130.1.1 | Back alignment and structure |
|---|
| >2gbb_A Putative chorismate mutase; alpha helical bundle, isomerase; HET: CIT; 2.10A {Yersinia pestis biovar microtus str} | Back alignment and structure |
|---|
| >2fp1_A Chorismate mutase; alpha-helical, isomerase; 1.55A {Mycobacterium tuberculosis} SCOP: a.130.1.4 PDB: 2f6l_A 2fp2_A* 2ao2_A* | Back alignment and structure |
|---|
| >2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A | Back alignment and structure |
|---|
| >1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7 | Back alignment and structure |
|---|
| >2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6 | Back alignment and structure |
|---|
| >2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6 | Back alignment and structure |
|---|
| >2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6 | Back alignment and structure |
|---|
| >1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12 | Back alignment and structure |
|---|
| >2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
| >1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5 | Back alignment and structure |
|---|
| >2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11 | Back alignment and structure |
|---|
| >2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11 | Back alignment and structure |
|---|
| >1wdn_A GLNBP, glutamine binding protein; closed form, complex, peptide, complex (binding protein/peptide); 1.94A {Escherichia coli} SCOP: c.94.1.1 PDB: 1ggg_A | Back alignment and structure |
|---|
| >3mpk_A Virulence sensor protein BVGS; venus flytrap, sensor domain, signaling protein; 2.04A {Bordetella pertussis} PDB: 3mpl_A | Back alignment and structure |
|---|
| >4f3p_A Glutamine-binding periplasmic protein; ssgcid, structural genomics, GLUT seattle structural genomics center for infectious disease; 2.40A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
| >3h7m_A Sensor protein; histidine kinase sensor domain, kinase, phosphoprotein, transferase; 2.40A {Geobacter sulfurreducens} SCOP: c.94.1.0 | Back alignment and structure |
|---|
| >2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria} | Back alignment and structure |
|---|
| >3k4u_A Binding component of ABC transporter; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; HET: LYS; 2.62A {Wolinella succinogenes} SCOP: c.94.1.0 | Back alignment and structure |
|---|
| >3kzg_A Arginine 3RD transport system periplasmic binding protein; arginine transport system, protein structure initiative II(PSI II); 2.06A {Legionella pneumophila subsp} SCOP: c.94.1.0 | Back alignment and structure |
|---|
| >3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei} | Back alignment and structure |
|---|
| >1xt8_A Putative amino-acid transporter periplasmic solut protein; ABC transport, cysteine uptake; 2.00A {Campylobacter jejuni} SCOP: c.94.1.1 | Back alignment and structure |
|---|
| >3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
| >3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
| >4h5g_A Amino acid ABC superfamily ATP binding cassette transporter, binding protein; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: ARG; 1.78A {Streptococcus pneumoniae} PDB: 4h5f_A* | Back alignment and structure |
|---|
| >1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5 | Back alignment and structure |
|---|
| >1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 406 | ||||
| d2qmwa1 | 184 | c.94.1.1 (A:1-184) Prephenate dehydratase {Staphyl | 2e-48 | |
| d2qmwa2 | 80 | d.58.18.3 (A:185-264) Prephenate dehydratase C-ter | 6e-22 | |
| d1phza1 | 97 | d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-t | 3e-19 |
| >d2qmwa1 c.94.1.1 (A:1-184) Prephenate dehydratase {Staphylococcus aureus [TaxId: 1280]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: Prephenate dehydratase species: Staphylococcus aureus [TaxId: 1280]
Score = 160 bits (406), Expect = 2e-48
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Query: 121 RVAYQGLPGAYSEAAARKAYPKCET--VPCDQFEAAFKAVELWLVDKAVLPIENSVGGSI 178
++ Y G G +S A R+ + + E P KAV V+PIENS+ G+I
Sbjct: 2 QLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTI 61
Query: 179 HRNYDLLLRHRLHIVGEVQLVVNHCLLGLPGVLKEELKRVFSHPQALAQCEMTLSNLGIV 238
+ D L + + GE++L +N L G ++K+V+S A++Q +
Sbjct: 62 NIVADALAQQDVFAHGEIRLDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFD 121
Query: 239 RISADDTAGAAQMVASIGERDTGAVASAQAAEIYGLDILAEKIQDDDDNVTRFLILAREP 298
D T + + E A+A + E YG + I+D NVTRFL++ +
Sbjct: 122 YDYVDSTIQSLTKI----ENGVAAIAPLGSGEAYGFTPIDTHIEDYPHNVTRFLVIKNQQ 177
Query: 299 II 300
Sbjct: 178 QF 179
|
| >d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 80 | Back information, alignment and structure |
|---|
| >d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 97 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 406 | |||
| d2qmwa1 | 184 | Prephenate dehydratase {Staphylococcus aureus [Tax | 100.0 | |
| d2qmwa2 | 80 | Prephenate dehydratase C-terminal domain {Staphylo | 99.91 | |
| d1phza1 | 97 | Phenylalanine hydroxylase N-terminal domain {Rat ( | 99.89 | |
| d2d8da1 | 80 | Chorismate mutase domain of P-protein {Thermus the | 99.25 | |
| d2h9da1 | 94 | Salicylate biosynthesis protein PchB {Pseudomonas | 99.12 | |
| d1ecma_ | 91 | Chorismate mutase domain of P-protein {Escherichia | 99.07 | |
| d1ybza1 | 74 | mono-domain chorismate mutase {Pyrococcus furiosus | 99.02 | |
| d2gtvx1 | 93 | Chorismate mutase-like protein MJ0246 {Methanococc | 98.94 | |
| d2f1fa1 | 76 | Acetolactate synthase small subunit, IlvH {Escheri | 97.25 | |
| d1y7pa2 | 77 | Hypothetical protein AF1403, N-terminal domain {Ar | 97.12 | |
| d2pc6a2 | 77 | Acetolactate synthase small subunit, IlvH {Nitroso | 97.09 | |
| d2fgca2 | 78 | Acetolactate synthase small subunit, IlvH {Thermot | 97.07 | |
| d2fp1a1 | 165 | Secreted chorismate mutase {Mycobacterium tubercul | 96.91 | |
| d1zpva1 | 83 | UPF0237 protein SP0238 {Streptococcus pneumoniae [ | 96.72 | |
| d1sc6a3 | 84 | Phosphoglycerate dehydrogenase, regulatory (C-term | 96.6 | |
| d2f06a2 | 70 | Hypothetical protein BT0572 {Bacteroides thetaiota | 96.45 | |
| d2f06a1 | 71 | Hypothetical protein BT0572 {Bacteroides thetaiota | 96.18 | |
| d1ygya3 | 78 | Phosphoglycerate dehydrogenase, regulatory (C-term | 96.09 | |
| d1u8sa1 | 86 | putative transcriptional repressor VC2159 {Vibrio | 94.63 | |
| d1u8sa2 | 93 | putative transcriptional repressor VC2159 {Vibrio | 94.09 | |
| d1wdna_ | 223 | Glutamine-binding protein {Escherichia coli [TaxId | 87.09 | |
| d1xt8a1 | 248 | Putative amino-acid transporter CjaA {Campylobacte | 86.85 |
| >d2qmwa1 c.94.1.1 (A:1-184) Prephenate dehydratase {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like II superfamily: Periplasmic binding protein-like II family: Phosphate binding protein-like domain: Prephenate dehydratase species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=5e-56 Score=406.15 Aligned_cols=177 Identities=26% Similarity=0.355 Sum_probs=168.5
Q ss_pred cEEEEEcCCCcHHHHHHHHHCCC--CceeccCCHHHHHHHHHcCCccEEEEeeecccccccccccchhccCCeEEEEEEE
Q 015464 120 VRVAYQGLPGAYSEAAARKAYPK--CETVPCDQFEAAFKAVELWLVDKAVLPIENSVGGSIHRNYDLLLRHRLHIVGEVQ 197 (406)
Q Consensus 120 ~~Va~lGp~Gs~s~~AA~~~f~~--~~~~~~~s~~~v~~aV~~g~~d~gvVPIENS~~G~V~~t~DlL~~~~l~I~gE~~ 197 (406)
|||+||||+|||||+||+++|+. .++++|.||++||++|++|++||||||||||++|+|.+|||+|.+++++|+||+.
T Consensus 1 mki~yLGp~GtfS~~Aa~~~f~~~~~~~~~~~s~~~v~~av~~~~~d~gvvPiENS~~G~V~~t~D~L~~~~~~I~~E~~ 80 (184)
T d2qmwa1 1 MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIR 80 (184)
T ss_dssp CEEEEECSTTSHHHHHHHHHCCTTSSEEEEESSHHHHHHHHHHCSSEEEEEEEESCSSSCSHHHHHHHHTTSSEEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHhcccCCceeeecCCHHHHHHHHHcCCCceeEEEeecccccchHHHHHhhhccCceeEeeec
Confidence 68999999999999999999984 5789999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeEeecCCCCCccCccEEEechHHHHHHHHHHhhcCCeEEeccCHHHHHHHHHhcCCCCeEEEcCHHhHHHcCCcee
Q 015464 198 LVVNHCLLGLPGVLKEELKRVFSHPQALAQCEMTLSNLGIVRISADDTAGAAQMVASIGERDTGAVASAQAAEIYGLDIL 277 (406)
Q Consensus 198 l~I~h~L~~~~g~~l~~I~~VySHpqal~QC~~~L~~~~~~~i~~~sTA~Aa~~v~~~~~~~~AAIas~~aA~~ygL~il 277 (406)
+||+|||+++++.++++|++||||||||+||++||+++.++.+.++|||+||+.+. ++.|||||+.||++|||+||
T Consensus 81 l~I~h~Ll~~~~~~l~~I~~V~SHpqal~QC~~~l~~~~~~~~~~~sta~aa~~~~----~~~aAIas~~aa~~ygL~il 156 (184)
T d2qmwa1 81 LDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIE----NGVAAIAPLGSGEAYGFTPI 156 (184)
T ss_dssp EECCEEEECCSSCCSTTCCEEEECHHHHHHSHHHHHHTTCEEEECSSHHHHHHTCB----TTEEEEEETTTSGGGTCCEE
T ss_pred ccchhhhcccccccccccceEEEecchHHHHHHHHHhhccchhhhhhHHHHHhhhh----hhhhccccHhHHHHcCChhh
Confidence 99999999999999999999999999999999999998888889999999998753 46899999999999999999
Q ss_pred ecCccCCCCCeeEEEEEecCCCC
Q 015464 278 AEKIQDDDDNVTRFLILAREPII 300 (406)
Q Consensus 278 ~~~I~d~~~N~TRF~vi~~~~~~ 300 (406)
+++|||.++|+|||+||+|++..
T Consensus 157 ~~~I~D~~~N~TRF~vi~~~~~~ 179 (184)
T d2qmwa1 157 DTHIEDYPHNVTRFLVIKNQQQF 179 (184)
T ss_dssp EECCCSCSCCEEEEEEEESCCCC
T ss_pred hhCCCCCCCCeEeEEEEecCCcC
Confidence 99999999999999999998754
|
| >d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2d8da1 a.130.1.1 (A:3-82) Chorismate mutase domain of P-protein {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d2h9da1 a.130.1.1 (A:1-94) Salicylate biosynthesis protein PchB {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1ecma_ a.130.1.1 (A:) Chorismate mutase domain of P-protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ybza1 a.130.1.1 (A:2-75) mono-domain chorismate mutase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d2gtvx1 a.130.1.3 (X:1-93) Chorismate mutase-like protein MJ0246 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]} | Back information, alignment and structure |
|---|
| >d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2fp1a1 a.130.1.4 (A:35-199) Secreted chorismate mutase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1wdna_ c.94.1.1 (A:) Glutamine-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1xt8a1 c.94.1.1 (A:10-257) Putative amino-acid transporter CjaA {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|