Citrus Sinensis ID: 015483
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 406 | ||||||
| 297735678 | 629 | unnamed protein product [Vitis vinifera] | 0.963 | 0.621 | 0.8 | 1e-172 | |
| 225443476 | 566 | PREDICTED: uncharacterized protein LOC10 | 0.940 | 0.674 | 0.808 | 1e-170 | |
| 42572403 | 582 | uncharacterized protein [Arabidopsis tha | 0.891 | 0.621 | 0.773 | 1e-169 | |
| 22331037 | 553 | uncharacterized protein [Arabidopsis tha | 0.916 | 0.672 | 0.748 | 1e-169 | |
| 297834110 | 582 | hypothetical protein ARALYDRAFT_318072 [ | 0.891 | 0.621 | 0.773 | 1e-169 | |
| 224095086 | 445 | predicted protein [Populus trichocarpa] | 0.899 | 0.820 | 0.821 | 1e-166 | |
| 312281603 | 590 | unnamed protein product [Thellungiella h | 0.891 | 0.613 | 0.773 | 1e-164 | |
| 449445933 | 563 | PREDICTED: uncharacterized protein LOC10 | 0.903 | 0.651 | 0.761 | 1e-159 | |
| 115469812 | 538 | Os06g0704100 [Oryza sativa Japonica Grou | 0.886 | 0.669 | 0.683 | 1e-144 | |
| 413934832 | 617 | hypothetical protein ZEAMMB73_649167 [Ze | 0.857 | 0.564 | 0.679 | 1e-142 |
| >gi|297735678|emb|CBI18365.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 316/395 (80%), Positives = 350/395 (88%), Gaps = 4/395 (1%)
Query: 14 ADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMS 73
AD+SV + E IS KT K QPV+F K+ GM KGLW +PNQLSEEMVRCMKNIF+S
Sbjct: 233 ADNSVAVFPEDIISIKTDTKCYQPVDFGKLTKGMPPKGLWEHPNQLSEEMVRCMKNIFIS 292
Query: 74 LADSALPAKSSALESQCSTLSPRGHLSNSSWWSSSDCSM----IQSPQIDMQNNSGVLAS 129
LA+SALP+K SA+ESQCS+LSPRGHLSNSS WSSS+ S+ +QSPQ+D++ +S VLA+
Sbjct: 293 LAESALPSKPSAVESQCSSLSPRGHLSNSSLWSSSERSIISSWVQSPQVDVKGHSEVLAT 352
Query: 130 ENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPV 189
ENV DPY+VRGKLSWADIG YGLA EVSWMSVGK+QLEYASGAL+ FRTLVEQLAKVNP+
Sbjct: 353 ENVCDPYKVRGKLSWADIGTYGLATEVSWMSVGKKQLEYASGALRRFRTLVEQLAKVNPI 412
Query: 190 HLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMI 249
L+ NEKLAFWINLYNALIMHAYLAYGVPR+DLKLFSLMQKAAYTVGGHS++AAAIEY+I
Sbjct: 413 QLNCNEKLAFWINLYNALIMHAYLAYGVPRSDLKLFSLMQKAAYTVGGHSFSAAAIEYVI 472
Query: 250 LKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKN 309
LKMKPP+HRPQIALLLAL KLKV+EE RK AID EPLVAFALSCGMYSSP+I IYTAK
Sbjct: 473 LKMKPPVHRPQIALLLALHKLKVSEELRKSAIDTCEPLVAFALSCGMYSSPSIRIYTAKK 532
Query: 310 VREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFV 369
VREELQEAQRDFIRASVG SSKG+LLVPKMLHCF KG VDDA LAVWISHYLPP QAAFV
Sbjct: 533 VREELQEAQRDFIRASVGLSSKGRLLVPKMLHCFAKGFVDDAKLAVWISHYLPPHQAAFV 592
Query: 370 EQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKI 404
EQCIS+RRQS LGSRNCGILPFDS FRYLFLPD++
Sbjct: 593 EQCISRRRQSLLGSRNCGILPFDSHFRYLFLPDQL 627
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225443476|ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241082 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|42572403|ref|NP_974297.1| uncharacterized protein [Arabidopsis thaliana] gi|62321660|dbj|BAD95282.1| hypothetical protein [Arabidopsis thaliana] gi|222424421|dbj|BAH20166.1| AT3G13000 [Arabidopsis thaliana] gi|332641753|gb|AEE75274.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|22331037|ref|NP_187906.2| uncharacterized protein [Arabidopsis thaliana] gi|15795132|dbj|BAB02510.1| unnamed protein product [Arabidopsis thaliana] gi|20260518|gb|AAM13157.1| unknown protein [Arabidopsis thaliana] gi|31711976|gb|AAP68344.1| At3g13000 [Arabidopsis thaliana] gi|332641754|gb|AEE75275.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297834110|ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata] gi|297330777|gb|EFH61196.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|224095086|ref|XP_002310343.1| predicted protein [Populus trichocarpa] gi|222853246|gb|EEE90793.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|312281603|dbj|BAJ33667.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
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| >gi|449445933|ref|XP_004140726.1| PREDICTED: uncharacterized protein LOC101204212 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|115469812|ref|NP_001058505.1| Os06g0704100 [Oryza sativa Japonica Group] gi|53791925|dbj|BAD54047.1| ternary complex factor MIP1-like [Oryza sativa Japonica Group] gi|113596545|dbj|BAF20419.1| Os06g0704100 [Oryza sativa Japonica Group] gi|215737317|dbj|BAG96246.1| unnamed protein product [Oryza sativa Japonica Group] gi|222636188|gb|EEE66320.1| hypothetical protein OsJ_22557 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|413934832|gb|AFW69383.1| hypothetical protein ZEAMMB73_649167 [Zea mays] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 406 | ||||||
| TAIR|locus:2089220 | 582 | AT3G13000 [Arabidopsis thalian | 0.891 | 0.621 | 0.719 | 4.9e-140 | |
| TAIR|locus:2015666 | 529 | AT1G16750 "AT1G16750" [Arabido | 0.923 | 0.708 | 0.575 | 9e-109 | |
| TAIR|locus:2171499 | 618 | AT5G47380 "AT5G47380" [Arabido | 0.613 | 0.402 | 0.379 | 3.7e-48 | |
| TAIR|locus:2165487 | 540 | AT5G42690 [Arabidopsis thalian | 0.640 | 0.481 | 0.358 | 5.9e-44 | |
| TAIR|locus:2115164 | 610 | AT4G37080 "AT4G37080" [Arabido | 0.637 | 0.424 | 0.361 | 9.3e-40 | |
| TAIR|locus:2049008 | 707 | AT2G23700 "AT2G23700" [Arabido | 0.605 | 0.347 | 0.333 | 1.7e-36 | |
| TAIR|locus:2043235 | 498 | AT2G39690 "AT2G39690" [Arabido | 0.630 | 0.514 | 0.362 | 2.2e-36 | |
| TAIR|locus:2011661 | 527 | AT1G76620 "AT1G76620" [Arabido | 0.544 | 0.419 | 0.344 | 2.5e-35 | |
| TAIR|locus:2009854 | 445 | AT1G43020 "AT1G43020" [Arabido | 0.593 | 0.541 | 0.329 | 5e-35 | |
| TAIR|locus:2199567 | 505 | AT1G21060 "AT1G21060" [Arabido | 0.559 | 0.449 | 0.350 | 2e-34 |
| TAIR|locus:2089220 AT3G13000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
Identities = 264/367 (71%), Positives = 297/367 (80%)
Query: 41 RKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLX 100
RK+P GM K LW+ PN LSEEMVRCMKNIFMSLAD +K+S+ ES S +SPRGHL
Sbjct: 211 RKLPRGMPPKYLWDQPNLLSEEMVRCMKNIFMSLADPTATSKASSNESHLSPVSPRGHLS 270
Query: 101 XXXX-----XXXXXXXXXXXPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAME 155
PQID+QNN+ VLA+ +VFDPYRVRGKLSWA+IGNY LA E
Sbjct: 271 SSASWWPSTERSMISSWVQSPQIDIQNNANVLATGDVFDPYRVRGKLSWAEIGNYSLASE 330
Query: 156 VSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAY 215
VSWMSVGK+QLEYASGALK FRTLVEQLA+VNP+HLS NEKLAFWINLYNALIMHAYLAY
Sbjct: 331 VSWMSVGKKQLEYASGALKKFRTLVEQLARVNPIHLSCNEKLAFWINLYNALIMHAYLAY 390
Query: 216 GVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPXXXXXXXXXXXXVTEE 275
GVP++DLKLFSLMQKAAYTVGGHSY AA +EY+ILKMKPP+HRP V+EE
Sbjct: 391 GVPKSDLKLFSLMQKAAYTVGGHSYTAATMEYVILKMKPPMHRPQIALLLAIHKMKVSEE 450
Query: 276 QRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLL 335
QR+ +ID +EPL+ FALSCGMYSSPA+ IY+AK V+EE+ EAQRDFI+ASVG SSKGKLL
Sbjct: 451 QRRASIDTHEPLLGFALSCGMYSSPAVRIYSAKGVKEEMLEAQRDFIQASVGLSSKGKLL 510
Query: 336 VPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRF 395
+PKMLHC+ K V+D+NL VWIS YLPP QAAFVEQCISQRRQS L SRNCGILPFDSRF
Sbjct: 511 LPKMLHCYAKSLVEDSNLGVWISRYLPPHQAAFVEQCISQRRQSLLASRNCGILPFDSRF 570
Query: 396 RYLFLPD 402
RYLFLPD
Sbjct: 571 RYLFLPD 577
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| TAIR|locus:2015666 AT1G16750 "AT1G16750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2171499 AT5G47380 "AT5G47380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2165487 AT5G42690 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2115164 AT4G37080 "AT4G37080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2049008 AT2G23700 "AT2G23700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2043235 AT2G39690 "AT2G39690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2011661 AT1G76620 "AT1G76620" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2009854 AT1G43020 "AT1G43020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2199567 AT1G21060 "AT1G21060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 406 | |||
| pfam04784 | 112 | pfam04784, DUF547, Protein of unknown function, DU | 1e-38 |
| >gnl|CDD|218263 pfam04784, DUF547, Protein of unknown function, DUF547 | Back alignment and domain information |
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Score = 134 bits (340), Expect = 1e-38
Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 32/141 (22%)
Query: 185 KVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKL-FSLMQKAAYTVGGHSYNAA 243
+V+P LS E+LAFWINLYNAL +H L + + F KA YTVGG + +
Sbjct: 1 RVDPESLSREEQLAFWINLYNALTIHLILDNYPVPSIRDIGFGPWNKAFYTVGGQALSLD 60
Query: 244 AIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAI- 302
IE+ IL+ P +P + FAL+CG S P +
Sbjct: 61 DIEHGILRGNWP-----------------------------DPRIHFALNCGSISCPPLR 91
Query: 303 -SIYTAKNVREELQEAQRDFI 322
YTA+N+ E+L+EA R+FI
Sbjct: 92 PEAYTAENLDEQLEEAAREFI 112
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Family of uncharacterized proteins from C. elegans and A. thaliana. Length = 112 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 406 | |||
| PF04784 | 117 | DUF547: Protein of unknown function, DUF547; Inter | 100.0 |
| >PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress) | Back alignment and domain information |
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Probab=100.00 E-value=1.9e-40 Score=286.58 Aligned_cols=112 Identities=46% Similarity=0.756 Sum_probs=105.2
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHHHHHHHhCCCCCchhh---hccccceeEEECCEEeeHHHHHHhhccCCCCCCChhH
Q 015483 185 KVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKL---FSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQI 261 (406)
Q Consensus 185 ~Vdl~~Ls~~EKLAFWINiYNalvmHa~L~~G~P~s~~k~---~~~~~ka~Y~VGG~~~SL~dIEh~ILR~~~p~~rp~~ 261 (406)
+||++.|+++||+|||||+||+|+||+++++|+|.+..++ ..+|.+..|+|||+.+||+||||+|||++.+
T Consensus 1 ~v~~~~l~~~e~lAFwIN~yNal~~h~~l~~~~~~s~~~~~~~~~~~~~~~y~Igg~~~SL~dIe~~ILR~~~~------ 74 (117)
T PF04784_consen 1 RVDLSSLSREEKLAFWINLYNALVLHAILENGPPKSILDRKLGGSFFSKVRYNIGGQRFSLDDIEHGILRGNRP------ 74 (117)
T ss_pred CcChHHCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHhhcccccccceEEEECCEEecHHHHHHhhccCCCC------
Confidence 5899999999999999999999999999999999888765 6899999999999999999999999998642
Q ss_pred HHHHHHhhccchHHHhhhccCCCCCeeEEEeccCCCCCCCce--eeccchHHHHHHHHHHHHH
Q 015483 262 ALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAIS--IYTAKNVREELQEAQRDFI 322 (406)
Q Consensus 262 ~~l~~~~~~~~~d~r~~~~L~~~ePrIhFAL~cGs~SsP~lR--vYta~~v~~qLe~A~~eFL 322 (406)
.++||||||||+||++|||+|| +|||++|++||++|+++||
T Consensus 75 --------------------~~~DprihFaL~cgs~s~P~lr~~~yt~~~l~~qL~~a~~~fi 117 (117)
T PF04784_consen 75 --------------------PWPDPRIHFALNCGSKSCPPLRREAYTAENLDEQLEEAAREFI 117 (117)
T ss_pred --------------------CCCCCceeeeeecCCCCChhhhhhccCHHHHHHHHHHHHHhhC
Confidence 0589999999999999999999 9999999999999999996
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 406 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 5e-04
Identities = 66/474 (13%), Positives = 132/474 (27%), Gaps = 139/474 (29%)
Query: 11 HQYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNI 70
HQY ++ E K Q + + + + + + + +S +
Sbjct: 14 HQYQYKDILSVFEDAFVDNFDCKDVQDMP-KSILSKEEIDHIIMSKDAVSG-----TLRL 67
Query: 71 FMSLADSALPAKSSALESQCSTLSPRGHLSNSSW-WSS-----SDCSMIQSPQIDMQNNS 124
F +L +E L N + S SM+ I+ ++
Sbjct: 68 FWTLLSKQEEMVQKFVEE---VLRI-----NYKFLMSPIKTEQRQPSMMTRMYIEQRDR- 118
Query: 125 GVLASEN-VFDPYRV-RGKLSWA------------DIGNYG--------LAMEVS----- 157
L ++N VF Y V R + ++ G +A++V
Sbjct: 119 --LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 158 ---------WMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALI 208
W+++ + T++E L K+ + N + +
Sbjct: 177 QCKMDFKIFWLNLKNCN---------SPETVLEMLQKLL-YQIDPN---------WTSRS 217
Query: 209 MHAYLAYGVPRNDLK--LFSLMQKAAYT----VGGHSYNAAAIEYMILKMKPPL---HRP 259
H+ + + ++ L L++ Y V + NA A L K L +
Sbjct: 218 DHSS-NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 260 QIALLLALQKLKVTEEQRKCAIDEYEPLVAFA--LSCGMYSSP---------AISIY--- 305
L A ++ + + E L C P +SI
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336
Query: 306 ------TAKNVREELQEAQRDFIRASVGFSSKGKLLVPK-MLHCFCKGSV--DDAN---- 352
T N + + I +S+ +L P F + SV A+
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTIIESSL------NVLEPAEYRKMFDRLSVFPPSAHIPTI 390
Query: 353 -LAV-W--ISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPD 402
L++ W + + V + + S + + +P
Sbjct: 391 LLSLIWFDVIKSDVMV---VVNKL---HKYSLVEKQPK-------ESTI-SIPS 430
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00