Citrus Sinensis ID: 015483


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400------
MVQILIYDILHQYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLSNSSWWSSSDCSMIQSPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
cHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccEEEEccEEEEHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccccEEcHHHHHHHHHHHHHHHHHHccccccccEEEcccHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHccccccccccEEEEccccccccccccccccc
cHHHHHHHHHHHHcHHHHHHcccccccccccccccccccHHHccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHEEccccEEcHHHHHHHHHcccccccccHHHHHHccccccccHHHHHHcccccccEEEEEEEccccccccEEEEcHHHHHHHHHHHHHHHHHHcccEccccEEEHHHHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHcccccccccEEEEEEcccccEEEEEcHccccc
MVQILIYDILHqyaddsvvlshekkistktgfkssqpvefrkvptgmsskglwnnpnqLSEEMVRCMKNIFMSLadsalpakssalesqcstlsprghlsnsswwsssdcsmiqspqidmqnnsgvlasenvfdpyrvrgklswadignyGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKvnpvhlssneKLAFWINLYNALIMHAYLaygvprndlKLFSLMQKAAYTVGGHSYNAAAIEYMILkmkpplhrPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALScgmysspaiSIYTAKNVREELQEAQRDFIRASvgfsskgkllvpKMLHCfckgsvddaNLAVWIShylpplqaAFVEQCISQRRQsflgsrncgilpfdsrfrylflpdkiph
MVQILIYDILHQYADDSVVLSHEKKistktgfkssqpvefrkvptgmsskglwnnpNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLSNSSWWSSSDCSMIQSPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
MVQILIYDILHQYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLsnsswwsssdcsmiqsPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPqialllalqklkVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
**QILIYDILHQYADDSVVLS*****************************************MVRCMKNIFMSL***************************************************VLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLP*****
**QILIYD**************************************************LSEEMVRCMKNIFM*****************************************************VLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAA*****************NCGILPFDSRFRYLFLPD*I**
MVQILIYDILHQYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSAL******************************CSMIQSPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
MVQILIYDILHQYADDSVVLSH****************************GLWNNPNQLSEEMVRCMKNIFMSLAD******************************************************NVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIP*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVQILIYDILHQYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLSNSSWWSSSDCSMIQSPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKIPH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query406
297735678 629 unnamed protein product [Vitis vinifera] 0.963 0.621 0.8 1e-172
225443476 566 PREDICTED: uncharacterized protein LOC10 0.940 0.674 0.808 1e-170
42572403 582 uncharacterized protein [Arabidopsis tha 0.891 0.621 0.773 1e-169
22331037 553 uncharacterized protein [Arabidopsis tha 0.916 0.672 0.748 1e-169
297834110 582 hypothetical protein ARALYDRAFT_318072 [ 0.891 0.621 0.773 1e-169
224095086445 predicted protein [Populus trichocarpa] 0.899 0.820 0.821 1e-166
312281603 590 unnamed protein product [Thellungiella h 0.891 0.613 0.773 1e-164
449445933 563 PREDICTED: uncharacterized protein LOC10 0.903 0.651 0.761 1e-159
115469812 538 Os06g0704100 [Oryza sativa Japonica Grou 0.886 0.669 0.683 1e-144
413934832 617 hypothetical protein ZEAMMB73_649167 [Ze 0.857 0.564 0.679 1e-142
>gi|297735678|emb|CBI18365.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 316/395 (80%), Positives = 350/395 (88%), Gaps = 4/395 (1%)

Query: 14  ADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMS 73
           AD+SV +  E  IS KT  K  QPV+F K+  GM  KGLW +PNQLSEEMVRCMKNIF+S
Sbjct: 233 ADNSVAVFPEDIISIKTDTKCYQPVDFGKLTKGMPPKGLWEHPNQLSEEMVRCMKNIFIS 292

Query: 74  LADSALPAKSSALESQCSTLSPRGHLSNSSWWSSSDCSM----IQSPQIDMQNNSGVLAS 129
           LA+SALP+K SA+ESQCS+LSPRGHLSNSS WSSS+ S+    +QSPQ+D++ +S VLA+
Sbjct: 293 LAESALPSKPSAVESQCSSLSPRGHLSNSSLWSSSERSIISSWVQSPQVDVKGHSEVLAT 352

Query: 130 ENVFDPYRVRGKLSWADIGNYGLAMEVSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPV 189
           ENV DPY+VRGKLSWADIG YGLA EVSWMSVGK+QLEYASGAL+ FRTLVEQLAKVNP+
Sbjct: 353 ENVCDPYKVRGKLSWADIGTYGLATEVSWMSVGKKQLEYASGALRRFRTLVEQLAKVNPI 412

Query: 190 HLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMI 249
            L+ NEKLAFWINLYNALIMHAYLAYGVPR+DLKLFSLMQKAAYTVGGHS++AAAIEY+I
Sbjct: 413 QLNCNEKLAFWINLYNALIMHAYLAYGVPRSDLKLFSLMQKAAYTVGGHSFSAAAIEYVI 472

Query: 250 LKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKN 309
           LKMKPP+HRPQIALLLAL KLKV+EE RK AID  EPLVAFALSCGMYSSP+I IYTAK 
Sbjct: 473 LKMKPPVHRPQIALLLALHKLKVSEELRKSAIDTCEPLVAFALSCGMYSSPSIRIYTAKK 532

Query: 310 VREELQEAQRDFIRASVGFSSKGKLLVPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFV 369
           VREELQEAQRDFIRASVG SSKG+LLVPKMLHCF KG VDDA LAVWISHYLPP QAAFV
Sbjct: 533 VREELQEAQRDFIRASVGLSSKGRLLVPKMLHCFAKGFVDDAKLAVWISHYLPPHQAAFV 592

Query: 370 EQCISQRRQSFLGSRNCGILPFDSRFRYLFLPDKI 404
           EQCIS+RRQS LGSRNCGILPFDS FRYLFLPD++
Sbjct: 593 EQCISRRRQSLLGSRNCGILPFDSHFRYLFLPDQL 627




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443476|ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241082 [Vitis vinifera] Back     alignment and taxonomy information
>gi|42572403|ref|NP_974297.1| uncharacterized protein [Arabidopsis thaliana] gi|62321660|dbj|BAD95282.1| hypothetical protein [Arabidopsis thaliana] gi|222424421|dbj|BAH20166.1| AT3G13000 [Arabidopsis thaliana] gi|332641753|gb|AEE75274.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|22331037|ref|NP_187906.2| uncharacterized protein [Arabidopsis thaliana] gi|15795132|dbj|BAB02510.1| unnamed protein product [Arabidopsis thaliana] gi|20260518|gb|AAM13157.1| unknown protein [Arabidopsis thaliana] gi|31711976|gb|AAP68344.1| At3g13000 [Arabidopsis thaliana] gi|332641754|gb|AEE75275.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297834110|ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata] gi|297330777|gb|EFH61196.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224095086|ref|XP_002310343.1| predicted protein [Populus trichocarpa] gi|222853246|gb|EEE90793.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|312281603|dbj|BAJ33667.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|449445933|ref|XP_004140726.1| PREDICTED: uncharacterized protein LOC101204212 [Cucumis sativus] Back     alignment and taxonomy information
>gi|115469812|ref|NP_001058505.1| Os06g0704100 [Oryza sativa Japonica Group] gi|53791925|dbj|BAD54047.1| ternary complex factor MIP1-like [Oryza sativa Japonica Group] gi|113596545|dbj|BAF20419.1| Os06g0704100 [Oryza sativa Japonica Group] gi|215737317|dbj|BAG96246.1| unnamed protein product [Oryza sativa Japonica Group] gi|222636188|gb|EEE66320.1| hypothetical protein OsJ_22557 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|413934832|gb|AFW69383.1| hypothetical protein ZEAMMB73_649167 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query406
TAIR|locus:2089220582 AT3G13000 [Arabidopsis thalian 0.891 0.621 0.719 4.9e-140
TAIR|locus:2015666529 AT1G16750 "AT1G16750" [Arabido 0.923 0.708 0.575 9e-109
TAIR|locus:2171499618 AT5G47380 "AT5G47380" [Arabido 0.613 0.402 0.379 3.7e-48
TAIR|locus:2165487540 AT5G42690 [Arabidopsis thalian 0.640 0.481 0.358 5.9e-44
TAIR|locus:2115164610 AT4G37080 "AT4G37080" [Arabido 0.637 0.424 0.361 9.3e-40
TAIR|locus:2049008707 AT2G23700 "AT2G23700" [Arabido 0.605 0.347 0.333 1.7e-36
TAIR|locus:2043235498 AT2G39690 "AT2G39690" [Arabido 0.630 0.514 0.362 2.2e-36
TAIR|locus:2011661527 AT1G76620 "AT1G76620" [Arabido 0.544 0.419 0.344 2.5e-35
TAIR|locus:2009854445 AT1G43020 "AT1G43020" [Arabido 0.593 0.541 0.329 5e-35
TAIR|locus:2199567505 AT1G21060 "AT1G21060" [Arabido 0.559 0.449 0.350 2e-34
TAIR|locus:2089220 AT3G13000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
 Identities = 264/367 (71%), Positives = 297/367 (80%)

Query:    41 RKVPTGMSSKGLWNNPNQLSEEMVRCMKNIFMSLADSALPAKSSALESQCSTLSPRGHLX 100
             RK+P GM  K LW+ PN LSEEMVRCMKNIFMSLAD    +K+S+ ES  S +SPRGHL 
Sbjct:   211 RKLPRGMPPKYLWDQPNLLSEEMVRCMKNIFMSLADPTATSKASSNESHLSPVSPRGHLS 270

Query:   101 XXXX-----XXXXXXXXXXXPQIDMQNNSGVLASENVFDPYRVRGKLSWADIGNYGLAME 155
                                 PQID+QNN+ VLA+ +VFDPYRVRGKLSWA+IGNY LA E
Sbjct:   271 SSASWWPSTERSMISSWVQSPQIDIQNNANVLATGDVFDPYRVRGKLSWAEIGNYSLASE 330

Query:   156 VSWMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALIMHAYLAY 215
             VSWMSVGK+QLEYASGALK FRTLVEQLA+VNP+HLS NEKLAFWINLYNALIMHAYLAY
Sbjct:   331 VSWMSVGKKQLEYASGALKKFRTLVEQLARVNPIHLSCNEKLAFWINLYNALIMHAYLAY 390

Query:   216 GVPRNDLKLFSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPXXXXXXXXXXXXVTEE 275
             GVP++DLKLFSLMQKAAYTVGGHSY AA +EY+ILKMKPP+HRP            V+EE
Sbjct:   391 GVPKSDLKLFSLMQKAAYTVGGHSYTAATMEYVILKMKPPMHRPQIALLLAIHKMKVSEE 450

Query:   276 QRKCAIDEYEPLVAFALSCGMYSSPAISIYTAKNVREELQEAQRDFIRASVGFSSKGKLL 335
             QR+ +ID +EPL+ FALSCGMYSSPA+ IY+AK V+EE+ EAQRDFI+ASVG SSKGKLL
Sbjct:   451 QRRASIDTHEPLLGFALSCGMYSSPAVRIYSAKGVKEEMLEAQRDFIQASVGLSSKGKLL 510

Query:   336 VPKMLHCFCKGSVDDANLAVWISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRF 395
             +PKMLHC+ K  V+D+NL VWIS YLPP QAAFVEQCISQRRQS L SRNCGILPFDSRF
Sbjct:   511 LPKMLHCYAKSLVEDSNLGVWISRYLPPHQAAFVEQCISQRRQSLLASRNCGILPFDSRF 570

Query:   396 RYLFLPD 402
             RYLFLPD
Sbjct:   571 RYLFLPD 577




GO:0005634 "nucleus" evidence=ISM
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS
GO:0005773 "vacuole" evidence=IDA
TAIR|locus:2015666 AT1G16750 "AT1G16750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171499 AT5G47380 "AT5G47380" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165487 AT5G42690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115164 AT4G37080 "AT4G37080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2049008 AT2G23700 "AT2G23700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043235 AT2G39690 "AT2G39690" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011661 AT1G76620 "AT1G76620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009854 AT1G43020 "AT1G43020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2199567 AT1G21060 "AT1G21060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query406
pfam04784112 pfam04784, DUF547, Protein of unknown function, DU 1e-38
>gnl|CDD|218263 pfam04784, DUF547, Protein of unknown function, DUF547 Back     alignment and domain information
 Score =  134 bits (340), Expect = 1e-38
 Identities = 50/141 (35%), Positives = 69/141 (48%), Gaps = 32/141 (22%)

Query: 185 KVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKL-FSLMQKAAYTVGGHSYNAA 243
           +V+P  LS  E+LAFWINLYNAL +H  L      +   + F    KA YTVGG + +  
Sbjct: 1   RVDPESLSREEQLAFWINLYNALTIHLILDNYPVPSIRDIGFGPWNKAFYTVGGQALSLD 60

Query: 244 AIEYMILKMKPPLHRPQIALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAI- 302
            IE+ IL+   P                             +P + FAL+CG  S P + 
Sbjct: 61  DIEHGILRGNWP-----------------------------DPRIHFALNCGSISCPPLR 91

Query: 303 -SIYTAKNVREELQEAQRDFI 322
              YTA+N+ E+L+EA R+FI
Sbjct: 92  PEAYTAENLDEQLEEAAREFI 112


Family of uncharacterized proteins from C. elegans and A. thaliana. Length = 112

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 406
PF04784117 DUF547: Protein of unknown function, DUF547; Inter 100.0
>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress) Back     alignment and domain information
Probab=100.00  E-value=1.9e-40  Score=286.58  Aligned_cols=112  Identities=46%  Similarity=0.756  Sum_probs=105.2

Q ss_pred             ccCCCCCCcchhHHHHHHHHHHHHHHHHHHhCCCCCchhh---hccccceeEEECCEEeeHHHHHHhhccCCCCCCChhH
Q 015483          185 KVNPVHLSSNEKLAFWINLYNALIMHAYLAYGVPRNDLKL---FSLMQKAAYTVGGHSYNAAAIEYMILKMKPPLHRPQI  261 (406)
Q Consensus       185 ~Vdl~~Ls~~EKLAFWINiYNalvmHa~L~~G~P~s~~k~---~~~~~ka~Y~VGG~~~SL~dIEh~ILR~~~p~~rp~~  261 (406)
                      +||++.|+++||+|||||+||+|+||+++++|+|.+..++   ..+|.+..|+|||+.+||+||||+|||++.+      
T Consensus         1 ~v~~~~l~~~e~lAFwIN~yNal~~h~~l~~~~~~s~~~~~~~~~~~~~~~y~Igg~~~SL~dIe~~ILR~~~~------   74 (117)
T PF04784_consen    1 RVDLSSLSREEKLAFWINLYNALVLHAILENGPPKSILDRKLGGSFFSKVRYNIGGQRFSLDDIEHGILRGNRP------   74 (117)
T ss_pred             CcChHHCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHhhcccccccceEEEECCEEecHHHHHHhhccCCCC------
Confidence            5899999999999999999999999999999999888765   6899999999999999999999999998642      


Q ss_pred             HHHHHHhhccchHHHhhhccCCCCCeeEEEeccCCCCCCCce--eeccchHHHHHHHHHHHHH
Q 015483          262 ALLLALQKLKVTEEQRKCAIDEYEPLVAFALSCGMYSSPAIS--IYTAKNVREELQEAQRDFI  322 (406)
Q Consensus       262 ~~l~~~~~~~~~d~r~~~~L~~~ePrIhFAL~cGs~SsP~lR--vYta~~v~~qLe~A~~eFL  322 (406)
                                          .++||||||||+||++|||+||  +|||++|++||++|+++||
T Consensus        75 --------------------~~~DprihFaL~cgs~s~P~lr~~~yt~~~l~~qL~~a~~~fi  117 (117)
T PF04784_consen   75 --------------------PWPDPRIHFALNCGSKSCPPLRREAYTAENLDEQLEEAAREFI  117 (117)
T ss_pred             --------------------CCCCCceeeeeecCCCCChhhhhhccCHHHHHHHHHHHHHhhC
Confidence                                0589999999999999999999  9999999999999999996




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query406
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 41.4 bits (96), Expect = 5e-04
 Identities = 66/474 (13%), Positives = 132/474 (27%), Gaps = 139/474 (29%)

Query: 11  HQYADDSVVLSHEKKISTKTGFKSSQPVEFRKVPTGMSSKGLWNNPNQLSEEMVRCMKNI 70
           HQY    ++   E         K  Q +  + + +      +  + + +S         +
Sbjct: 14  HQYQYKDILSVFEDAFVDNFDCKDVQDMP-KSILSKEEIDHIIMSKDAVSG-----TLRL 67

Query: 71  FMSLADSALPAKSSALESQCSTLSPRGHLSNSSW-WSS-----SDCSMIQSPQIDMQNNS 124
           F +L           +E     L       N  +  S         SM+    I+ ++  
Sbjct: 68  FWTLLSKQEEMVQKFVEE---VLRI-----NYKFLMSPIKTEQRQPSMMTRMYIEQRDR- 118

Query: 125 GVLASEN-VFDPYRV-RGKLSWA------------DIGNYG--------LAMEVS----- 157
             L ++N VF  Y V R +                ++   G        +A++V      
Sbjct: 119 --LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176

Query: 158 ---------WMSVGKQQLEYASGALKTFRTLVEQLAKVNPVHLSSNEKLAFWINLYNALI 208
                    W+++             +  T++E L K+    +  N         + +  
Sbjct: 177 QCKMDFKIFWLNLKNCN---------SPETVLEMLQKLL-YQIDPN---------WTSRS 217

Query: 209 MHAYLAYGVPRNDLK--LFSLMQKAAYT----VGGHSYNAAAIEYMILKMKPPL---HRP 259
            H+     +  + ++  L  L++   Y     V  +  NA A     L  K  L    + 
Sbjct: 218 DHSS-NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276

Query: 260 QIALLLALQKLKVTEEQRKCAIDEYEPLVAFA--LSCGMYSSP---------AISIY--- 305
               L A     ++ +     +   E        L C     P          +SI    
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336

Query: 306 ------TAKNVREELQEAQRDFIRASVGFSSKGKLLVPK-MLHCFCKGSV--DDAN---- 352
                 T  N +    +     I +S+       +L P      F + SV    A+    
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTIIESSL------NVLEPAEYRKMFDRLSVFPPSAHIPTI 390

Query: 353 -LAV-W--ISHYLPPLQAAFVEQCISQRRQSFLGSRNCGILPFDSRFRYLFLPD 402
            L++ W  +      +    V +     + S +  +               +P 
Sbjct: 391 LLSLIWFDVIKSDVMV---VVNKL---HKYSLVEKQPK-------ESTI-SIPS 430


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00