Citrus Sinensis ID: 015489

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400------
Protein Sequence
MAAPLRSATIKPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLNAWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNEWEMFKDRMTSAEKAYLEALGVDSTTLKKDENQSKVMD
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHEEEEEccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccHHHHHHcccccEEEEEEEEccccccccccccccEEEEEEcccHHHHHHHHHHccHHHHHcccEEEEEccccccccccHHHHHHHHHHHcccccccccccccccEEEEEEEEccccEEEEEcccccccccccccccccEEEEEEEcccHHHHHHHHHHHccccccccHHHHHHHHHHcccccEEEEEEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHEEEEHHHHHHHHHHEEcccccEEcccccccccccccccccEcccccccccHHHHHHHHcccccccccccccccEEEEccccccccccccccEEccccccEccccccccccccccccEEEEEEEcHcHHHHHHHHHHHcccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHcccEEccccccccccEEEEEEEEccccEEEEEEEccccccccccccccHHHHHHHcHHccHHHHHHHHHHHHHHHHccccHcccccHcccccccEEEEEEcHEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
Coil and Loop (DISEMBL)
maaplrsatikpaETMKLMITTFVGVAVGFFLGICfpaisiskmnlpsslfptsdlnyvedkytGISTQALLNAWSTLQtnrgfysqnntkiwiptnprgaerlapgiiesqsdlyprrlwgspdkdlpirpkylVTFTVGFDLKHNIDAAVKKFSENFTIMLFhydgrtsdweeFEWSKRAIHVSARKQTKWWyakrflhpdivasyDYIFIwdedlgvenfngEEYIKLVRKHgleisqpglepngwltwqmtkrrndtevhtqteeregwcaetheppcaAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALrkcvepahekigvvdaqwivhqgvpslgnqgqphdgrapwEAVRERCKNEWEMFKDRMTSAEKAYLEALgvdsttlkkdenqskvmd
Flexible Loop (DISEMBL)
maaplrsatikpaeTMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLNAWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIiesqsdlyprrlwgspdkdlpirPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGleisqpglepngwltwQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGvpslgnqgqphdgraPWEAVRERCKNEWEMFKDRMTSAEKAYLealgvdsttlkkdenqskvmd
Low Complexity Region (SEG)
MAAPLRSATIKPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLNAWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNEWEMFKDRMTSAEKAYLEALGVDSTTLKKDENQSKVMD
Disordered region (IsUnstruct)
**************TMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLNAWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTK**************EGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPS*************WEAVRERCKNEWEMFK*********YL*********************
Disordered Region (DISOPRED)
*****************LMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNY**************************************************IESQSDLY*****************YLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQG**********************RCKNEWEMFKDRMTSAEKAYL*********************
Disordered Region (DISEMBL)
MAAPLRSATIKPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLNAWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKR****************CAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSL************WEAVRERCKNEWEMFKDRMTSAEKAYLEALGVDSTTLKK*********
Disordered Region (DISPRO)
************AETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLNAWSTLQT*******NNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGN********APWEAVRERCKNEWEMFKDRMTSAEKAYLEALGV****************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAPLRSATIKPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLNAWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNEWEMFKDRMTSAEKAYLEALGVDSTTLKKDENQSKVMD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	406
449450058	402	PREDICTED: uncharacterized protein LOC10	0.963	0.972	0.739	1e-179
225452298	402	PREDICTED: uncharacterized protein LOC10	0.960	0.970	0.742	1e-179
296087587	388	unnamed protein product [Vitis vinifera]	0.926	0.969	0.750	1e-176
224141263	403	predicted protein [Populus trichocarpa]	0.963	0.970	0.722	1e-175
343172492	393	hypothetical protein, partial [Silene la	0.955	0.987	0.717	1e-171
343172490	393	hypothetical protein, partial [Silene la	0.955	0.987	0.717	1e-171
359473149	491	PREDICTED: uncharacterized protein LOC10	0.970	0.802	0.703	1e-171
296081357	385	unnamed protein product [Vitis vinifera]	0.943	0.994	0.714	1e-168
356540241	399	PREDICTED: uncharacterized protein LOC10	0.955	0.972	0.690	1e-168
356567576	399	PREDICTED: uncharacterized protein LOC10	0.955	0.972	0.685	1e-167

>gi|449450058|ref|XP_004142781.1| PREDICTED: uncharacterized protein LOC101219968 [Cucumis sativus] gi|449483793|ref|XP_004156693.1| PREDICTED: uncharacterized LOC101219968 [Cucumis sativus]

 Score =  635 bits (1638), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 292/395 (73%), Positives = 335/395 (84%), Gaps = 4/395 (1%)

Query: 1   MAAPLRSATI-KPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYV 59
           M  P+R   + KP E M++++TTFVG   GFFLG+ FP +S+S++N PSSL P+ DL Y+
Sbjct: 1   MVNPIRGGNMRKPNEIMRILVTTFVGGVFGFFLGVSFPTLSLSQLNFPSSLIPSIDLTYI 60

Query: 60  EDKYTGISTQALLNAWSTLQTNRGFYSQ---NNTKIWIPTNPRGAERLAPGIIESQSDLY 116
           EDKY+G+ST+A LNAWS+L+ NRG  SQ   N TKIW+PTNPRGAERL PGI+E +SD  
Sbjct: 61  EDKYSGLSTEAFLNAWSSLKGNRGISSQFSLNETKIWVPTNPRGAERLPPGIVEPESDFN 120

Query: 117 PRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEF 176
            RRLWG P +DL I+PKYLVTFTVGFD K NIDAAVKKFSENFTI+LFHYDGR S+WE+ 
Sbjct: 121 LRRLWGMPSEDLAIKPKYLVTFTVGFDQKKNIDAAVKKFSENFTILLFHYDGRASEWEDL 180

Query: 177 EWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHG 236
           EWSKRAIHVS  KQTKWWYAKRFLHPDIVASYDYIF+WDEDLGVE+FN EEYIKLVRKHG
Sbjct: 181 EWSKRAIHVSVYKQTKWWYAKRFLHPDIVASYDYIFVWDEDLGVEHFNAEEYIKLVRKHG 240

Query: 237 LEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSRE 296
           LEISQPGLEPN  LTWQMTKRR D+EVH +TEE+ GWC + H PPCAAFVEIMATVFSR+
Sbjct: 241 LEISQPGLEPNQGLTWQMTKRRGDSEVHKETEEKPGWCTDPHLPPCAAFVEIMATVFSRD 300

Query: 297 AWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGR 356
           AWRCVW++IQNDLVHGWGLDFALRKCV PAHEKIGVVDAQWIVHQ VPSLGNQG+  +GR
Sbjct: 301 AWRCVWHLIQNDLVHGWGLDFALRKCVYPAHEKIGVVDAQWIVHQSVPSLGNQGKAENGR 360

Query: 357 APWEAVRERCKNEWEMFKDRMTSAEKAYLEALGVD 391
           APWE VRERC+ EWE+F+ R+  AEKAY   +G+D
Sbjct: 361 APWEGVRERCRKEWEIFRSRLADAEKAYYNGVGID 395

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452298|ref|XP_002272341.1| PREDICTED: uncharacterized protein LOC100264636 [Vitis vinifera]

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 294/396 (74%), Positives = 340/396 (85%), Gaps = 6/396 (1%)

Query: 1   MAAPLRSATIKPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVE 60
           M  PLR    KP ETM+L++T F+GV VGFFLG+ FP +S++KM+LPSSLFP+ DLNY+E
Sbjct: 1   MGTPLRGLR-KPNETMRLIVTAFIGVVVGFFLGVSFPTLSLTKMSLPSSLFPSIDLNYLE 59

Query: 61  DKYTGISTQALLNAWSTLQTNRG----FYSQNNTKIWIPTNPRGAERLAPGIIESQSDLY 116
           DKY+G+STQALLN WS+L+ NRG    FY  N TKIW+PTNPRGAERL PGII S+SD Y
Sbjct: 60  DKYSGLSTQALLNVWSSLKRNRGTASHFYKFNETKIWVPTNPRGAERLPPGIIVSESDFY 119

Query: 117 PRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEF 176
            RRLWG P +DL I+P+YLVTFTVG   K+NIDAAVKKFSE+FTI+LFHYDGR S+W+EF
Sbjct: 120 LRRLWGLPSEDLTIKPRYLVTFTVGIAQKNNIDAAVKKFSESFTILLFHYDGRVSEWDEF 179

Query: 177 EWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHG 236
           EWSKRAIHVS +KQTKWWYAKRFLHPDIVA YDYIF+WDEDLGVE+F+ EEYIKLVRKHG
Sbjct: 180 EWSKRAIHVSVQKQTKWWYAKRFLHPDIVAPYDYIFMWDEDLGVEHFDAEEYIKLVRKHG 239

Query: 237 LEISQPGLEPNG-WLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSR 295
           LEISQPGL+P    LTWQMTK+R+++EVH +T+ER GWC + H PPCAAFVEIMATVFSR
Sbjct: 240 LEISQPGLDPQSKGLTWQMTKKRDNSEVHKETQERPGWCTDPHLPPCAAFVEIMATVFSR 299

Query: 296 EAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDG 355
            AWRCVW+MIQNDL+HGWGLDFALRKCVEPAHEKIGVVDAQWI+HQ VPSLGNQG+   G
Sbjct: 300 NAWRCVWHMIQNDLIHGWGLDFALRKCVEPAHEKIGVVDAQWILHQSVPSLGNQGKAEGG 359

Query: 356 RAPWEAVRERCKNEWEMFKDRMTSAEKAYLEALGVD 391
           +APWE VRERC+ EW MF+DRM  AEKAY EA+ +D
Sbjct: 360 KAPWEGVRERCRKEWTMFQDRMAVAEKAYFEAMKID 395

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087587|emb|CBI34843.3| unnamed protein product [Vitis vinifera]

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 286/381 (75%), Positives = 332/381 (87%), Gaps = 5/381 (1%)

Query: 16  MKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLNAW 75
           M+L++T F+GV VGFFLG+ FP +S++KM+LPSSLFP+ DLNY+EDKY+G+STQALLN W
Sbjct: 1   MRLIVTAFIGVVVGFFLGVSFPTLSLTKMSLPSSLFPSIDLNYLEDKYSGLSTQALLNVW 60

Query: 76  STLQTNRG----FYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIR 131
           S+L+ NRG    FY  N TKIW+PTNPRGAERL PGII S+SD Y RRLWG P +DL I+
Sbjct: 61  SSLKRNRGTASHFYKFNETKIWVPTNPRGAERLPPGIIVSESDFYLRRLWGLPSEDLTIK 120

Query: 132 PKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQT 191
           P+YLVTFTVG   K+NIDAAVKKFSE+FTI+LFHYDGR S+W+EFEWSKRAIHVS +KQT
Sbjct: 121 PRYLVTFTVGIAQKNNIDAAVKKFSESFTILLFHYDGRVSEWDEFEWSKRAIHVSVQKQT 180

Query: 192 KWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNG-WL 250
           KWWYAKRFLHPDIVA YDYIF+WDEDLGVE+F+ EEYIKLVRKHGLEISQPGL+P    L
Sbjct: 181 KWWYAKRFLHPDIVAPYDYIFMWDEDLGVEHFDAEEYIKLVRKHGLEISQPGLDPQSKGL 240

Query: 251 TWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLV 310
           TWQMTK+R+++EVH +T+ER GWC + H PPCAAFVEIMATVFSR AWRCVW+MIQNDL+
Sbjct: 241 TWQMTKKRDNSEVHKETQERPGWCTDPHLPPCAAFVEIMATVFSRNAWRCVWHMIQNDLI 300

Query: 311 HGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNEW 370
           HGWGLDFALRKCVEPAHEKIGVVDAQWI+HQ VPSLGNQG+   G+APWE VRERC+ EW
Sbjct: 301 HGWGLDFALRKCVEPAHEKIGVVDAQWILHQSVPSLGNQGKAEGGKAPWEGVRERCRKEW 360

Query: 371 EMFKDRMTSAEKAYLEALGVD 391
            MF+DRM  AEKAY EA+ +D
Sbjct: 361 TMFQDRMAVAEKAYFEAMKID 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141263|ref|XP_002323994.1| predicted protein [Populus trichocarpa] gi|222866996|gb|EEF04127.1| predicted protein [Populus trichocarpa]

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 286/396 (72%), Positives = 335/396 (84%), Gaps = 5/396 (1%)

Query: 1   MAAPLRSATIK-PAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYV 59
           M  P+RS T K P+E M+L +TTF+G+  GFFLGI FP +S+SKMNLPSSLFP+ DL Y+
Sbjct: 1   MPVPIRSGTPKKPSEMMRLFMTTFIGIIFGFFLGISFPTLSLSKMNLPSSLFPSIDLTYI 60

Query: 60  EDKYTGISTQALLNAWSTLQTNRG----FYSQNNTKIWIPTNPRGAERLAPGIIESQSDL 115
           EDKY+G+S QAL NAWS+L+ N+         N T+IW+PTNPRGAERL PGI+ S+SD 
Sbjct: 61  EDKYSGLSKQALFNAWSSLKGNKEASPLLPRYNETEIWVPTNPRGAERLPPGIVASESDF 120

Query: 116 YPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEE 175
           Y RRLWG P +DL I+P+YLVTFTVG+D K NIDAAVKKFSENFTI+LFHYDGRT++W+E
Sbjct: 121 YLRRLWGLPSEDLTIQPRYLVTFTVGYDQKKNIDAAVKKFSENFTIVLFHYDGRTTEWDE 180

Query: 176 FEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKH 235
           FEWSKR +H+SA KQTKWWYAKRFLHPDIVA YDYIF+WDEDLGVE+F+ E+YIKLVRKH
Sbjct: 181 FEWSKRTVHISAHKQTKWWYAKRFLHPDIVAPYDYIFLWDEDLGVEHFDAEKYIKLVRKH 240

Query: 236 GLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSR 295
           GLEISQPGL+P+   TW MTKRR+  EVH  TEER GWC + H PPCAAFVEIMATVFSR
Sbjct: 241 GLEISQPGLDPDRGTTWAMTKRRDGIEVHKDTEERPGWCTDPHLPPCAAFVEIMATVFSR 300

Query: 296 EAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDG 355
           +AWRCVW+MIQNDLVHGWGLDFA+RKCVEPAHEKIGVVDAQWI+HQGVPSLG+QGQ   G
Sbjct: 301 DAWRCVWHMIQNDLVHGWGLDFAMRKCVEPAHEKIGVVDAQWIIHQGVPSLGSQGQAQKG 360

Query: 356 RAPWEAVRERCKNEWEMFKDRMTSAEKAYLEALGVD 391
           +APWE VRERC+ EW MF+DRMT+AE  Y +A+ +D
Sbjct: 361 KAPWEGVRERCRKEWTMFQDRMTNAENVYYKAMEMD 396

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343172492|gb|AEL98950.1| hypothetical protein, partial [Silene latifolia]

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 282/393 (71%), Positives = 328/393 (83%), Gaps = 5/393 (1%)

Query: 1   MAAPLRSATI-KPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYV 59
           M   LRS  + KP E MKL++TTFVG+  GFFLG+ FP +S++K+N PS L P  DL Y+
Sbjct: 1   MKTILRSGHMRKPNEMMKLILTTFVGIVFGFFLGVSFPTLSMTKINFPSPLLPQIDLTYI 60

Query: 60  EDKYTGISTQALLNAWSTLQTNRGFYSQ----NNTKIWIPTNPRGAERLAPGIIESQSDL 115
           EDKY+GISTQALLN WSTL+      S+    N TK+W PTNPRGAE L PGI+ S++D 
Sbjct: 61  EDKYSGISTQALLNVWSTLKGRTVVLSEGQTLNVTKVWAPTNPRGAELLPPGIVVSETDF 120

Query: 116 YPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEE 175
           + RRLWG P++DL ++PKYLVTFTVGFD +  IDA VKKFSENFTI+LFHYDGRT++W+E
Sbjct: 121 FVRRLWGLPEEDLTVKPKYLVTFTVGFDQRATIDACVKKFSENFTIVLFHYDGRTTEWDE 180

Query: 176 FEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKH 235
           FEWSKRAIHVSARKQTKWWYAKRFLHPD+VA+YDYIFIWDEDLGVE+FN EEY+KLVRKH
Sbjct: 181 FEWSKRAIHVSARKQTKWWYAKRFLHPDVVAAYDYIFIWDEDLGVEHFNAEEYLKLVRKH 240

Query: 236 GLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSR 295
           GLEISQPGLEP+  LTWQMTKRR D+EVH  TEE+ GWC +   PPCAAF+EIMA VFSR
Sbjct: 241 GLEISQPGLEPDKGLTWQMTKRRGDSEVHKITEEKTGWCPDPVLPPCAAFIEIMAPVFSR 300

Query: 296 EAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDG 355
            AWRCVW+M+QNDLVHGWGLDFALRKCVEPAHEKIGV+D+QWIVHQ VPSLGNQG   +G
Sbjct: 301 SAWRCVWHMLQNDLVHGWGLDFALRKCVEPAHEKIGVIDSQWIVHQSVPSLGNQGNSENG 360

Query: 356 RAPWEAVRERCKNEWEMFKDRMTSAEKAYLEAL 388
           RAPWE VRERC+ EW  F+DRM +AE+AY E+L
Sbjct: 361 RAPWEGVRERCRREWTTFQDRMANAEQAYFESL 393

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|343172490|gb|AEL98949.1| hypothetical protein, partial [Silene latifolia]

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 282/393 (71%), Positives = 328/393 (83%), Gaps = 5/393 (1%)

Query: 1   MAAPLRSATI-KPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYV 59
           M   LRS  + KP E MKL++TTFVG+  GFFLG+ FP +S++K+N PS L P  DL Y+
Sbjct: 1   MKTILRSGHMRKPNEMMKLILTTFVGIVFGFFLGVSFPTLSMTKINFPSPLLPQIDLTYI 60

Query: 60  EDKYTGISTQALLNAWSTLQTNRGFYSQ----NNTKIWIPTNPRGAERLAPGIIESQSDL 115
           EDKY+GISTQALLN WSTL+      S+    N TK+W PTNPRGAE L PGI+ S++D 
Sbjct: 61  EDKYSGISTQALLNVWSTLKGRTVVPSEGQILNVTKVWAPTNPRGAELLPPGIVVSETDF 120

Query: 116 YPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEE 175
           + RRLWG P++DL ++PKYLVTFTVGFD +  IDA VKKFSENFTI+LFHYDGRT++W+E
Sbjct: 121 FVRRLWGLPEEDLTVKPKYLVTFTVGFDQRATIDACVKKFSENFTIVLFHYDGRTTEWDE 180

Query: 176 FEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKH 235
           FEWSKRAIHVSARKQTKWWYAKRFLHPD+VA+YDYIFIWDEDLGVE+FN EEY+KLVRKH
Sbjct: 181 FEWSKRAIHVSARKQTKWWYAKRFLHPDVVAAYDYIFIWDEDLGVEHFNAEEYLKLVRKH 240

Query: 236 GLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSR 295
           GLEISQPGLEP+  LTWQMTKRR D+EVH  TEE+ GWC +   PPCAAF+EIMA VFSR
Sbjct: 241 GLEISQPGLEPDKGLTWQMTKRRGDSEVHKITEEKPGWCPDPVLPPCAAFIEIMAPVFSR 300

Query: 296 EAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDG 355
            AWRCVW+M+QNDLVHGWGLDFALRKCVEPAHEKIGV+D+QWIVHQ VPSLGNQG   +G
Sbjct: 301 SAWRCVWHMLQNDLVHGWGLDFALRKCVEPAHEKIGVIDSQWIVHQSVPSLGNQGNSENG 360

Query: 356 RAPWEAVRERCKNEWEMFKDRMTSAEKAYLEAL 388
           RAPWE VRERC+ EW  F+DRM +AE+AY E+L
Sbjct: 361 RAPWEGVRERCRREWTTFQDRMANAEQAYFESL 393

Source: Silene latifolia

Species: Silene latifolia

Genus: Silene

Family: Caryophyllaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473149|ref|XP_002282407.2| PREDICTED: uncharacterized protein LOC100243914 [Vitis vinifera]

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 282/401 (70%), Positives = 332/401 (82%), Gaps = 7/401 (1%)

Query: 4   PLRSATI---KPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVE 60
           PL   ++   KP ETM+L++T  VGV  GF +GI FP +SI+K+NLPSSL P  D+ Y+ 
Sbjct: 92  PLLGCSVIVRKPNETMRLIVTISVGVVFGFLIGISFPTLSITKLNLPSSLLPNVDIAYIR 151

Query: 61  DKYTGISTQALLNAWSTLQTNRGFYSQN---NTKIWIPTNPRGAERLAPGIIESQSDLYP 117
           DK +G STQALL+A S+ + NR   +QN    +KIW P+NPRGAERL PGI+ ++SD Y 
Sbjct: 152 DKSSGFSTQALLDALSSAKYNRT-QAQNLNGTSKIWAPSNPRGAERLPPGIVAAESDFYL 210

Query: 118 RRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFE 177
           RRLWG P +DL I+PKYLVTFTVG+D K N+DAAVKKFSE+FTI+LFHYDGRT++W+EFE
Sbjct: 211 RRLWGKPSEDLTIKPKYLVTFTVGYDQKKNVDAAVKKFSEDFTILLFHYDGRTTEWDEFE 270

Query: 178 WSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGL 237
           WSKRAIHVS R+QTKWWYAKRFLHPDIVA YDYIFIWDEDLGVE+FN EEYI+LVRK+GL
Sbjct: 271 WSKRAIHVSVRRQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIRLVRKYGL 330

Query: 238 EISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREA 297
           EISQPGLEPN  LTWQMTKRR D EVH +TEE+ GWC   H PPCAAFVEIMA VFSR+A
Sbjct: 331 EISQPGLEPNKGLTWQMTKRRGDREVHKETEEKPGWCPNPHLPPCAAFVEIMAPVFSRDA 390

Query: 298 WRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRA 357
           WRCVW+M+QNDLVHGWGLDFALR+CVEPAHEKIGVVD+QWIVHQ VPSLGNQGQ  +G+A
Sbjct: 391 WRCVWHMLQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIVHQTVPSLGNQGQAENGKA 450

Query: 358 PWEAVRERCKNEWEMFKDRMTSAEKAYLEALGVDSTTLKKD 398
           PW+ VRERCK EW MF+ RMT+AEKAY + +G++ T    D
Sbjct: 451 PWQGVRERCKKEWTMFRVRMTNAEKAYYKEMGINPTNSTAD 491

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081357|emb|CBI16790.3| unnamed protein product [Vitis vinifera]

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 275/385 (71%), Positives = 322/385 (83%), Gaps = 2/385 (0%)

Query: 16  MKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLNAW 75
           M+L++T  VGV  GF +GI FP +SI+K+NLPSSL P  D+ Y+ DK +G STQALL+A 
Sbjct: 1   MRLIVTISVGVVFGFLIGISFPTLSITKLNLPSSLLPNVDIAYIRDKSSGFSTQALLDAL 60

Query: 76  STLQTNRGFYSQNN--TKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPK 133
           S+ + NR      N  +KIW P+NPRGAERL PGI+ ++SD Y RRLWG P +DL I+PK
Sbjct: 61  SSAKYNRTQAQNLNGTSKIWAPSNPRGAERLPPGIVAAESDFYLRRLWGKPSEDLTIKPK 120

Query: 134 YLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKW 193
           YLVTFTVG+D K N+DAAVKKFSE+FTI+LFHYDGRT++W+EFEWSKRAIHVS R+QTKW
Sbjct: 121 YLVTFTVGYDQKKNVDAAVKKFSEDFTILLFHYDGRTTEWDEFEWSKRAIHVSVRRQTKW 180

Query: 194 WYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQ 253
           WYAKRFLHPDIVA YDYIFIWDEDLGVE+FN EEYI+LVRK+GLEISQPGLEPN  LTWQ
Sbjct: 181 WYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIRLVRKYGLEISQPGLEPNKGLTWQ 240

Query: 254 MTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGW 313
           MTKRR D EVH +TEE+ GWC   H PPCAAFVEIMA VFSR+AWRCVW+M+QNDLVHGW
Sbjct: 241 MTKRRGDREVHKETEEKPGWCPNPHLPPCAAFVEIMAPVFSRDAWRCVWHMLQNDLVHGW 300

Query: 314 GLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNEWEMF 373
           GLDFALR+CVEPAHEKIGVVD+QWIVHQ VPSLGNQGQ  +G+APW+ VRERCK EW MF
Sbjct: 301 GLDFALRRCVEPAHEKIGVVDSQWIVHQTVPSLGNQGQAENGKAPWQGVRERCKKEWTMF 360

Query: 374 KDRMTSAEKAYLEALGVDSTTLKKD 398
           + RMT+AEKAY + +G++ T    D
Sbjct: 361 RVRMTNAEKAYYKEMGINPTNSTAD 385

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540241|ref|XP_003538598.1| PREDICTED: uncharacterized protein LOC100778486 [Glycine max]

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 268/388 (69%), Positives = 324/388 (83%)

Query: 7   SATIKPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGI 66
           SA  KP+E M+  +TTF+ + +GFF+G+  P +SI+K+NLPS L P+ DL+Y+ED+YTG 
Sbjct: 8   SAGRKPSEIMRFFVTTFISIVLGFFIGVSVPTLSITKLNLPSGLLPSIDLSYIEDRYTGR 67

Query: 67  STQALLNAWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDK 126
              + +N  +   +++   S + +KIW+P+NPRGAERL PGI+E++SD Y RRLWG P +
Sbjct: 68  QAWSFMNNGNKRSSSQVQLSNDTSKIWVPSNPRGAERLPPGIVEAESDYYLRRLWGKPSE 127

Query: 127 DLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVS 186
           DL  RP YLVTFTVG+D K+NIDAAVKKFS NFTI+LFHYDGRT++W+EFEWSK+AIHVS
Sbjct: 128 DLTSRPNYLVTFTVGYDQKNNIDAAVKKFSGNFTILLFHYDGRTTEWDEFEWSKQAIHVS 187

Query: 187 ARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEP 246
             KQTKWWYAKRFLHPDIVA YDYIFIWDEDLGVE+FN EEYIKLVRKHGLEISQPGLEP
Sbjct: 188 VHKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEP 247

Query: 247 NGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQ 306
           N  LTWQMTKRR D EVH  TEE+ GWC++ H PPCAAFVEIMA VFSR+AWRCVW+MIQ
Sbjct: 248 NRGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQ 307

Query: 307 NDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERC 366
           NDLVHGWGLDFALRKCVEPAHEKIGVVD+QWIVHQG+PSLGNQG+   G+APW+ VRERC
Sbjct: 308 NDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQGIPSLGNQGESQTGKAPWQGVRERC 367

Query: 367 KNEWEMFKDRMTSAEKAYLEALGVDSTT 394
           + EW MF+ R+ +AE AY  ++G+D++ 
Sbjct: 368 RKEWTMFQSRLANAEYAYHNSIGIDTSN 395

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567576|ref|XP_003551994.1| PREDICTED: uncharacterized protein LOC100811265 [Glycine max]

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 266/388 (68%), Positives = 322/388 (82%)

Query: 7   SATIKPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGI 66
           SA  KP+E MK  +TTF+G+  GFF+G+  P +SI+K+NLPS L P+ DL+Y+ED+Y G 
Sbjct: 8   SAGRKPSEIMKFFLTTFIGIVFGFFIGVSIPTLSITKLNLPSGLLPSIDLSYIEDRYAGR 67

Query: 67  STQALLNAWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDK 126
              + +N  +   +++   S + +KIW+P+NPRGAERL PGI+E++SD Y RRLWG P +
Sbjct: 68  QAWSFMNNGNKRSSSQVQLSSDTSKIWVPSNPRGAERLPPGIVEAESDFYLRRLWGKPSE 127

Query: 127 DLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVS 186
           DL  RP YLVTFTVG+D K+NIDAAVKKFS NFTI+LFHYDGRT++W+EFEWSK+AIHVS
Sbjct: 128 DLTSRPNYLVTFTVGYDQKNNIDAAVKKFSGNFTILLFHYDGRTTEWDEFEWSKQAIHVS 187

Query: 187 ARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEP 246
             KQTKWWYAKRFLHPDIVA YDYIFIWDEDLGVE+FN EEYIKLVRKHGLEISQPGLEP
Sbjct: 188 VHKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYIKLVRKHGLEISQPGLEP 247

Query: 247 NGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQ 306
           N  LTWQMTKRR D EVH  TEE+ GWC++ H PPCAAFVEIMA VFSR+AWRCVW+MIQ
Sbjct: 248 NKGLTWQMTKRRGDQEVHKVTEEKPGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQ 307

Query: 307 NDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERC 366
           NDLVHGWGLDFALR+CVEPAHEKIGVVD+QWIVHQG+PSLGNQG+   G++ W+ VRERC
Sbjct: 308 NDLVHGWGLDFALRRCVEPAHEKIGVVDSQWIVHQGLPSLGNQGESQTGKSRWQGVRERC 367

Query: 367 KNEWEMFKDRMTSAEKAYLEALGVDSTT 394
           + EW MF+ R+ +AE AY +++G D++ 
Sbjct: 368 RKEWTMFQSRLANAENAYYKSMGTDTSN 395

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	406
TAIR|locus:2086721	398	AT3G27470 "AT3G27470" [Arabido	0.928	0.947	0.679	1.3e-153
TAIR|locus:2008640	404	AT1G67850 "AT1G67850" [Arabido	0.955	0.960	0.653	3.8e-149
TAIR|locus:2031905	401	AT1G13000 [Arabidopsis thalian	0.940	0.952	0.641	1.1e-144
TAIR|locus:2205140	382	AT1G08040 [Arabidopsis thalian	0.891	0.947	0.638	1.5e-138
TAIR|locus:2057557	374	AT2G28310 "AT2G28310" [Arabido	0.743	0.807	0.698	8.4e-136
TAIR|locus:2079291	396	AT3G26440 [Arabidopsis thalian	0.923	0.946	0.609	1.6e-132
TAIR|locus:504956279	381	AT1G24570 [Arabidopsis thalian	0.719	0.766	0.697	1.7e-124
TAIR|locus:2008425	425	AT1G61240 [Arabidopsis thalian	0.637	0.609	0.477	4.5e-66
TAIR|locus:2202124	438	AT1G11170 [Arabidopsis thalian	0.600	0.557	0.505	8.5e-65
TAIR|locus:2124608	389	AT4G18530 "AT4G18530" [Arabido	0.615	0.642	0.484	1.8e-64

TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)]

 Score = 1498 (532.4 bits), Expect = 1.3e-153, P = 1.3e-153
 Identities = 261/384 (67%), Positives = 318/384 (82%)

Query:    11 KPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQA 70
             +P++ M+L++T+F GV VGF +GI FP ++++KMNLPS+LFP+ DL Y+EDKY+ IS Q 
Sbjct:     3 RPSQMMRLLLTSFFGVIVGFLMGITFPTLTLTKMNLPSTLFPSIDLAYIEDKYSDISRQR 62

Query:    71 LLNAWST---LQTNRGF----YSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGS 123
             L  +WS+   L+         Y+ N+TKIW+ TNPRGAERL P I+  +SD Y RRLWG 
Sbjct:    63 LFGSWSSTKGLKLKNDIPDPPYNYNDTKIWVSTNPRGAERLPPDIVTPESDFYLRRLWGD 122

Query:   124 PDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAI 183
             P++DL ++ +YLVTFTVG+D + NID  +KKFS+NF+IMLFHYDGR S+WEEFEWSKRAI
Sbjct:   123 PNEDLTVKQRYLVTFTVGYDQRKNIDTVLKKFSDNFSIMLFHYDGRASEWEEFEWSKRAI 182

Query:   184 HVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPG 243
             HVS RKQTKWWYAKRFLHPDIVA Y+YIFIWDEDLGVE+F+ E+Y+ +V+KHGLEISQPG
Sbjct:   183 HVSIRKQTKWWYAKRFLHPDIVAPYEYIFIWDEDLGVEHFDSEKYLAVVKKHGLEISQPG 242

Query:   244 LEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWY 303
             LEP   LTW+MTK+R+DTEVH   EER GWC + + PPCAAFVEIMA VFSR+AWRCVW+
Sbjct:   243 LEPYEGLTWEMTKKRDDTEVHKHAEERNGWCTDPNLPPCAAFVEIMAPVFSRKAWRCVWH 302

Query:   304 MIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVR 363
             MIQNDL+HGWGLDFA+RKCV+ AHEKIGVVDAQWI+HQGVPSLGNQGQP  G+ PWE VR
Sbjct:   303 MIQNDLIHGWGLDFAVRKCVQNAHEKIGVVDAQWIIHQGVPSLGNQGQPEQGKQPWEGVR 362

Query:   364 ERCKNEWEMFKDRMTSAEKAYLEA 387
             ERC+ EW MF+DR+  AEKAY EA
Sbjct:   363 ERCRREWTMFQDRLDDAEKAYFEA 386

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)]

 Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
 Identities = 255/390 (65%), Positives = 315/390 (80%)

Query:     7 SATIKPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGI 66
             S + K  + MK++ T F GV  GF +GI FP++SI+K++LP++  P++DL+Y+E+K + I
Sbjct:     8 SISRKSKDGMKIIATAFFGVTFGFLIGISFPSLSITKVSLPTNFLPSNDLSYIEEKGSKI 67

Query:    67 STQALLNAWSTLQTNRGFYSQ--NNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSP 124
             +T     AWS+ + N    S   + +KIW+P+NPRGAE L PG++ ++SD Y RRLWG P
Sbjct:    68 ATPESHKAWSSSKGNDSSSSTPIDKSKIWVPSNPRGAEMLPPGMVAAESDFYLRRLWGLP 127

Query:   125 DKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIH 184
              +DL   P+YL TFTVG + K NIDA VKKFSENFTI+LFHYDGR ++W+EFEWSK AIH
Sbjct:   128 HEDLKSEPRYLATFTVGINQKANIDACVKKFSENFTIVLFHYDGRVTEWDEFEWSKTAIH 187

Query:   185 VSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGL 244
             +S RKQTKWWYAKRFLHPDIVA YDYIF+WDEDLGVE+FN EEY+K+V+KHGLEISQPGL
Sbjct:   188 ISVRKQTKWWYAKRFLHPDIVARYDYIFVWDEDLGVEHFNAEEYVKMVKKHGLEISQPGL 247

Query:   245 EPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYM 304
             EPN  LTWQMTKRR D EVH  TEER GWC++ H PPCAAFVEIMA VFSR AWRCVW++
Sbjct:   248 EPNQGLTWQMTKRRGDMEVHKITEERPGWCSDPHLPPCAAFVEIMAPVFSRNAWRCVWHV 307

Query:   305 IQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRE 364
             IQNDLVHGWGLDFALR+CVEPAHEKIGVVD+QW+VHQ  PSLGNQG+  DG+APW+ VR+
Sbjct:   308 IQNDLVHGWGLDFALRRCVEPAHEKIGVVDSQWVVHQSFPSLGNQGEATDGKAPWQGVRD 367

Query:   365 RCKNEWEMFKDRMTSAEKAYLEALGVDSTT 394
             RCK EW MF+ RM +AEK Y ++L V+ ++
Sbjct:   368 RCKKEWTMFQSRMANAEKDYFKSLQVEGSS 397

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 1414 (502.8 bits), Expect = 1.1e-144, P = 1.1e-144
 Identities = 247/385 (64%), Positives = 310/385 (80%)

Query:    11 KPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQA 70
             KP + M+L+I TFVG+ VGFFLGI FP +S++K+N PS + P+ D+ YVED+    S++ 
Sbjct:    16 KPNDGMRLIIATFVGIVVGFFLGISFPTLSLTKLNFPSGILPSVDITYVEDETPETSSET 75

Query:    71 LLNAWSTLQTNRGFYSQN--NTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDL 128
             LL+ WS+     G  S +  + KIW+P+NPRGAE L PGII  +SD Y RRLWG P++D+
Sbjct:    76 LLHTWSSRGPLHGANSSDAPHWKIWVPSNPRGAEMLTPGIIAPESDYYLRRLWGLPEEDV 135

Query:   129 PIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSAR 188
             P++PKYL+ FTVGF  K N+DA VKKFS++FTI+LFHYDGRT++WEE EWSKRAIHVS  
Sbjct:   136 PVKPKYLIAFTVGFGQKVNVDACVKKFSKDFTIVLFHYDGRTTEWEELEWSKRAIHVSVP 195

Query:   189 KQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNG 248
             KQTKWWYAKRFLHPDIVA YDY+FIWDEDLG+ENF+ EEYI+L++KHGLEISQP +E   
Sbjct:   196 KQTKWWYAKRFLHPDIVAPYDYVFIWDEDLGLENFDVEEYIRLIKKHGLEISQPAVESKK 255

Query:   249 WLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQND 308
              +TW++TKR+   EVH   +E+ G C + H PPCAAF+EIMA VFSR+AWRCVW+MIQND
Sbjct:   256 KITWEITKRKTKGEVHKDAKEKPGRCNDPHLPPCAAFIEIMAPVFSRDAWRCVWHMIQND 315

Query:   309 LVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKN 368
             LVHGWGLDFALRKCVEPAHEKIGVVD+QWI+HQ +PSLG+QG+  DG+A W+ VR+RCK 
Sbjct:   316 LVHGWGLDFALRKCVEPAHEKIGVVDSQWIIHQSLPSLGSQGEAQDGKAGWQGVRDRCKR 375

Query:   369 EWEMFKDRMTSAEKAYLEALGVDST 393
             EW MF+ RM S+EK YL+ +  +ST
Sbjct:   376 EWTMFQSRMASSEKQYLKEIA-NST 399

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)]

 Score = 1356 (482.4 bits), Expect = 1.5e-138, P = 1.5e-138
 Identities = 238/373 (63%), Positives = 302/373 (80%)

Query:    14 ETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQALLN 73
             E  KL+ITT VGV  GFF+GI  P  S  K++LPS L  + D+   + K           
Sbjct:    15 ENAKLIITTIVGVVFGFFVGITLPLGSFRKISLPSGLMSSLDVAMSDGKL---------- 64

Query:    74 AWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPK 133
              +S  ++     S+ + KI++PTNP GAE L PGII +++D Y RRLWG P +DL  +PK
Sbjct:    65 -FSGGRSPEDIGSRKSPKIYVPTNPHGAELLPPGIIVAETDFYLRRLWGEPSEDLKKKPK 123

Query:   134 YLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKW 193
             YLVTFTVGF+ ++NI+AAVKKFSE+F I+LFHYDGRT++W++FEWSK AIH+SA+KQTKW
Sbjct:   124 YLVTFTVGFEQRNNINAAVKKFSEDFQILLFHYDGRTTEWDQFEWSKNAIHISAKKQTKW 183

Query:   194 WYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQ 253
             WYAKRFLHPD+V++Y+YIFIWDEDLGVE+FN + Y++LV+KHGLEISQPGLEPN  LTW+
Sbjct:   184 WYAKRFLHPDVVSAYEYIFIWDEDLGVEHFNADRYVELVKKHGLEISQPGLEPNNGLTWE 243

Query:   254 MTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGW 313
             MTKRR D +VH +T+E+ GWC++ H PPCAAFVEIMA VFSREAWRCVW+MIQNDLVHGW
Sbjct:   244 MTKRRGDRDVHKETKEKPGWCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGW 303

Query:   314 GLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNEWEMF 373
             GLDFALR+CVEPAHEKIGVVD+QWI+HQ +PSLG+QG+  +G++PW+ VRERC+NEW MF
Sbjct:   304 GLDFALRRCVEPAHEKIGVVDSQWIIHQVIPSLGSQGESEEGKSPWQGVRERCRNEWTMF 363

Query:   374 KDRMTSAEKAYLE 386
             ++R+  A+KAY+E
Sbjct:   364 QNRVAEADKAYME 376

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 1252 (445.8 bits), Expect = 8.4e-136, Sum P(2) = 8.4e-136
 Identities = 211/302 (69%), Positives = 263/302 (87%)

Query:    84 FYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFD 143
             F S+   +I++PTNPRGAE L PGI+ +++D Y RRLWG P++DL  +PKYLVTFTVGF+
Sbjct:    67 FGSRKFPEIYVPTNPRGAELLPPGIVVAKTDFYLRRLWGEPNEDLKKKPKYLVTFTVGFE 126

Query:   144 LKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPD 203
              +++I+  VKKFSE+F I+LFHYDGRT++W++FEWSK AIH+S RKQTKWWYAKRFLHPD
Sbjct:   127 QRNHINGVVKKFSEDFQILLFHYDGRTTEWDQFEWSKSAIHISTRKQTKWWYAKRFLHPD 186

Query:   204 IVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEV 263
             +V++Y+YIFIWDEDLGVE+FN ++YI+LV+KHGLEISQPGLEPN  LTW+MTKRR D EV
Sbjct:   187 VVSAYEYIFIWDEDLGVEHFNADKYIELVKKHGLEISQPGLEPNNGLTWEMTKRRGDREV 246

Query:   264 HTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCV 323
             H  T+E+ GWC + H PPCAAFVEIMA VFSREAWRCVW+MIQNDLVHGWGLDFALR+CV
Sbjct:   247 HKDTKEKPGWCKDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCV 306

Query:   324 EPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNEWEMFKDRMTSAEKA 383
             EPAHEKIGVVD+QWI+H+ +PSLG+QG+  +G+APW+ VR+RCK EW MF++R+  A+K 
Sbjct:   307 EPAHEKIGVVDSQWIIHKVIPSLGSQGKSENGKAPWQGVRDRCKMEWTMFQNRLADADKE 366

Query:   384 YL 385
             YL
Sbjct:   367 YL 368

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)]

 Score = 1299 (462.3 bits), Expect = 1.6e-132, P = 1.6e-132
 Identities = 234/384 (60%), Positives = 294/384 (76%)

Query:    11 KPAETMKLMITTFVGVAVGFFLGICFPAISISKMNLPSSLFPTSDLNYVEDKYTGISTQA 70
             KP + M L+I+ F G+ +GF LGI FP +S++KMN PSS+ P+    Y+E++    S++ 
Sbjct:    16 KPNDGMMLVISIFAGIVIGFLLGISFPTLSLTKMNFPSSILPSVATVYIENEKPEKSSK- 74

Query:    71 LLNAWSTLQTNRGFYSQNNTKIWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPI 130
                   T   N    S ++ KIW+P+NPRGAE L P  + ++SD Y RRLWG P  DLP+
Sbjct:    75 ------TSSQNESDASHHH-KIWVPSNPRGAEMLPPSFVAAESDFYLRRLWGLPKDDLPV 127

Query:   131 -RPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARK 189
              +PKYLV FTV ++ + NIDA VKKFS+NFTI+LFHYDG+TS+++EFEWSKRAIHVS  K
Sbjct:   128 VKPKYLVAFTVSYEQRKNIDACVKKFSDNFTIVLFHYDGKTSEYDEFEWSKRAIHVSVPK 187

Query:   190 QTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGW 249
             QTKWWYAKRFLHPDI+A Y+YIFIWDEDLGVENF+ EEYIK+V KHGLEISQP +E    
Sbjct:   188 QTKWWYAKRFLHPDIIAPYEYIFIWDEDLGVENFDAEEYIKIVNKHGLEISQPAVESRKS 247

Query:   250 LTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDL 309
             +TW++TKR    EVH + EE+ G C + H PPCA F+EIMA VFSREAWRCVW+MIQNDL
Sbjct:   248 ITWKITKRIPGIEVHKEVEEKPGRCNDPHLPPCAGFIEIMAPVFSREAWRCVWHMIQNDL 307

Query:   310 VHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNE 369
             VHGWGLDFALRKCVEPAHEKIGVVD+QWI+HQ +PSLG+QG   +G+  ++ VRERCK E
Sbjct:   308 VHGWGLDFALRKCVEPAHEKIGVVDSQWIIHQKIPSLGSQGTAQEGKTAFQGVRERCKRE 367

Query:   370 WEMFKDRMTSAEKAYLEALGVDST 393
             W MF+ RMT +E+ YL+ +   S+
Sbjct:   368 WTMFQKRMTRSEQKYLKEIASASS 391

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)]

 Score = 1168 (416.2 bits), Expect = 1.7e-124, Sum P(2) = 1.7e-124
 Identities = 205/294 (69%), Positives = 248/294 (84%)

Query:   101 AERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFT 160
             AERL  GII S+SDLY RRLWG+PD+DL  +P+YL TFTVG++ +HNIDA V KFSENFT
Sbjct:    80 AERLPSGIIASESDLYLRRLWGNPDEDLVKQPRYLATFTVGYNQRHNIDACVSKFSENFT 139

Query:   161 IMLFHYDGRTSDW-EEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLG 219
             I+LFHYDG TS W +EFEWS+ AIH+S +KQTKWWYAKRFLHPDIVA YDYIFIWDEDLG
Sbjct:   140 IVLFHYDGVTSAWNDEFEWSRNAIHISVKKQTKWWYAKRFLHPDIVARYDYIFIWDEDLG 199

Query:   220 VENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHE 279
             V++FN EEYI +V+KH LEISQPGL+P     WQ+TKRR  +EVH +T+E+  WC+    
Sbjct:   200 VDHFNAEEYIHIVKKHDLEISQPGLDPETGFNWQITKRREHSEVHKETDEKLDWCSNPPR 259

Query:   280 PPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVE-PAHEKIGVVDAQWI 338
             PPCAAFVEIMA VFSR+AWRCVW+MIQNDLVHGWGLDFALR+CVE PA EKIG+VD+QWI
Sbjct:   260 PPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEEPAFEKIGIVDSQWI 319

Query:   339 VHQGVPSLGNQGQPHDGRAPWEAVRERCKNEWEMFKDRMTSAEKAYLEALGVDS 392
             VHQ +PSLGNQG+  +G+APW+ VR+RC+ EW+MF++R+ +AEK Y  +L V+S
Sbjct:   320 VHQFIPSLGNQGKADNGKAPWQGVRDRCQMEWKMFENRVEAAEKDYFRSLQVES 373

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 128/268 (47%), Positives = 169/268 (63%)

Query:   107 GIIESQSDLYPRRLWGSPD---KDLPIRPKYLVTFTVGFDLKHNIDAAVKKF-SENFTIM 162
             GI++ +SDL  + LW S     K   +  + L+   VG   K N+DA VKKF   NFT++
Sbjct:    85 GIMQPKSDLELKPLWSSSSLRSKSGELTNRNLLAMPVGLKQKDNVDAVVKKFLPANFTVI 144

Query:   163 LFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVEN 222
             LFHYDG    W + EWS +AIH+ A  QTKWW+AKRFLHPDIV+ YDY+F+WDEDLGVEN
Sbjct:   145 LFHYDGNMDQWWDLEWSSKAIHIVAHNQTKWWFAKRFLHPDIVSIYDYVFLWDEDLGVEN 204

Query:   223 FNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEV-HTQTEEREG--WCAETHE 279
             FN ++Y+++V+  GLEISQP L PN          R+ T++ H +  +  G   C+   E
Sbjct:   205 FNPQKYLRIVKTAGLEISQPALHPNSTEVHHRITVRSRTKIFHRRVYDSRGNMKCSNASE 264

Query:   280 -PPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVE-PAHEKIGVVDAQW 337
              PPC  FVE MA VFSR AW C W +IQNDLVHGWG+D  L  C +    +K+G+VD+++
Sbjct:   265 GPPCTGFVEGMAPVFSRSAWFCTWNLIQNDLVHGWGMDMKLGYCAQGDRSKKVGIVDSEY 324

Query:   338 IVHQGVPSLGNQGQPHDGRAPWEAVRER 365
             I HQG+ +LG  G P    +    V  R
Sbjct:   325 IFHQGIQTLGGSGYPDKKNSARSGVNRR 352

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)]

 Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
 Identities = 128/253 (50%), Positives = 169/253 (66%)

Query:   104 LAPGIIESQSDLYPRRLW--GS-PDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKF-SENF 159
             L  GII+S+SDL  + LW  GS   K + +  + L+   VG   K N+DA VKKF   NF
Sbjct:    85 LPRGIIQSRSDLELKPLWSRGSLRSKGVEMTNRNLLAIPVGLKQKGNVDALVKKFLPANF 144

Query:   160 TIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLG 219
             TI+LFHYDG    W + EWS ++IH+ A+ QTKWW+AKRFLHPD+V+ YDYIF+WDEDLG
Sbjct:   145 TIVLFHYDGNMDKWWDLEWSSKSIHIVAQNQTKWWFAKRFLHPDVVSIYDYIFLWDEDLG 204

Query:   220 VENFNGEEYIKLVRKHGLEISQPGLEPNGW-LTWQMTKRRNDTEVHTQTEEREGW--CAE 276
             VENFN E Y+K+V+  GLEISQP L+ N   +  ++T R    + H +     G   C+ 
Sbjct:   205 VENFNPERYLKIVKSVGLEISQPALDHNSTEIHHKITLRSKTKKFHRRVYINRGHKRCSN 264

Query:   277 TH-EPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEK-IGVVD 334
             T  +PPC  FVE MA VFS+ AW C W +IQNDLVHGWG+D  L  C +    K +G+VD
Sbjct:   265 TSSDPPCTGFVEGMAPVFSKAAWLCTWNLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIVD 324

Query:   335 AQWIVHQGVPSLG 347
             +++I+HQG+ +LG
Sbjct:   325 SEYILHQGIQTLG 337

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)]

 Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
 Identities = 125/258 (48%), Positives = 169/258 (65%)

Query:    98 PRGAERLAPGIIESQSDLYPRRLWGSPD--KDLPIRPKYLVTFTVGFDLKHNIDAAVKKF 155
             P G E L  GIIE  S+L  + LW   D  K  P     L+   VG   K  ++  ++KF
Sbjct:    71 PVGTEALPQGIIEKTSNLETQHLWNYDDTKKRRPNHSMSLLAMAVGIKQKELVNKVIQKF 130

Query:   156 S-ENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIW 214
                +F +MLFHYDG   DW+++ W+  AIHVS   QTKWW+AKRFLHPDIVA Y+YIF+W
Sbjct:   131 PPRDFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYEYIFLW 190

Query:   215 DEDLGVENFNGEEYIKLVRKHGLEISQPGLEPN-GWLTWQMTKRRNDTEVHTQTEEREGW 273
             DEDLGV +FN + Y+ +V++ GLEISQP L+ +   +   +T RR  ++VH +  + +G 
Sbjct:   191 DEDLGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEVHHPITARRKKSKVHRRMYKYKGS 250

Query:   274 --CAE-THEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEK- 329
               C + +  PPC  +VE+MA VFSR AWRC WYMIQNDL+H WGLD  L  C +   +K 
Sbjct:   251 GRCDDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQGDRKKN 310

Query:   330 IGVVDAQWIVHQGVPSLG 347
             +GVVDA++I+H G+P+LG
Sbjct:   311 VGVVDAEYIIHYGLPTLG 328


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.434    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      406       406   0.00078  118 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  629 (67 KB)
  Total size of DFA:  323 KB (2161 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.41u 0.08s 32.49t   Elapsed:  00:00:01
  Total cpu time:  32.41u 0.08s 32.49t   Elapsed:  00:00:01
  Start:  Sat May 11 04:29:59 2013   End:  Sat May 11 04:30:00 2013

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	406
pfam05212	294	pfam05212, DUF707, Protein of unknown function (DU	0.0

>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707)

 Score =  543 bits (1402), Expect = 0.0
 Identities = 209/294 (71%), Positives = 253/294 (86%), Gaps = 1/294 (0%)

Query: 92  IWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAA 151
           IW+PTNPRGAERL PGI+ S+SD Y RRLWGSP++D+  +PKYL+ FTVG+  K N+DA 
Sbjct: 1   IWVPTNPRGAERLPPGIVVSESDFYLRRLWGSPEEDVASKPKYLLAFTVGYSQKANVDAC 60

Query: 152 VKKFSENFTIMLFHYDGRTSDWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYI 211
           VKKFS+NFTI+LFHYDGRT++W+E EWSK+AIHVSA+KQTKWW+AKRFLHPDIVA Y+YI
Sbjct: 61  VKKFSDNFTIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYI 120

Query: 212 FIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPN-GWLTWQMTKRRNDTEVHTQTEER 270
           F+WDEDLGV+NF+ EEYIK+V+KHGLEISQPGL+P+ G +TW++TKRR D EVH  T E+
Sbjct: 121 FLWDEDLGVDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREK 180

Query: 271 EGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKI 330
              C  +  PPC  FVEIMA VFSR+AWRCVW+MIQNDLVHGWGLDFALR+CVEPAHEKI
Sbjct: 181 GRCCDNSTGPPCTGFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEKI 240

Query: 331 GVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNEWEMFKDRMTSAEKAY 384
           GVVD+QW+VHQG+PSLG+QG   +G+APW+ VR+RCK EW MF+ R  +AEK Y
Sbjct: 241 GVVDSQWVVHQGIPSLGSQGTAENGKAPWQGVRDRCKAEWTMFQRRWAAAEKEY 294

This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	406
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	100.0
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	94.35
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	94.18
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	94.13
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	93.55
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	93.37
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	90.74
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	89.44
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	88.09
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	87.6
cd04195	201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	84.2
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	82.16
COG1216	305	Predicted glycosyltransferases [General function p	80.23

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=100.00  E-value=1.8e-130  Score=949.25  Aligned_cols=293  Identities=61%  Similarity=1.157  Sum_probs=287.0

Q ss_pred             eeccCCCCCcCCCCCCceecCCCCccccCCCCCCCCCCCCCceEEEEEeccccccchhHHhhccccCcEEEEEEECCCCC
Q 015489           92 IWIPTNPRGAERLAPGIIESQSDLYPRRLWGSPDKDLPIRPKYLVTFTVGFDLKHNIDAAVKKFSENFTIMLFHYDGRTS  171 (406)
Q Consensus        92 ~~~~~~p~g~e~LP~giv~~~sd~~l~~Lwg~p~~~~~~~~k~Lla~~VG~~qk~~vd~~v~kf~~nF~vmLFhYDG~~~  171 (406)
                      |+++++|+|+|+||+|||+++|||+||||||.|.+|.+.++|||||||||+|||++||++|+||++|||||||||||++|
T Consensus         1 ~~~~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~~~~~k~Lla~~VG~kqk~~vd~~v~Kf~~nF~i~LfhYDg~vd   80 (294)
T PF05212_consen    1 IWVPCNPRGAERLPPGIVVRESDLELRPLWGNPSEDLPKKPKYLLAMTVGIKQKDNVDAIVKKFSDNFDIMLFHYDGRVD   80 (294)
T ss_pred             CCcCCCCCccccCCCCccccCCCceeeecCCCccccccCCCceEEEEEecHHHHhhhhHHHhhhccCceEEEEEecCCcC
Confidence            68999999999999999999999999999999999999899999999999999999999999999999999999999999


Q ss_pred             cccccccccceEEEEeeccccccccccccCcccccCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCCC-c
Q 015489          172 DWEEFEWSKRAIHVSARKQTKWWYAKRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGW-L  250 (406)
Q Consensus       172 ~W~d~eWs~~aiHv~a~kqtKWw~akRFLHPdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S~-i  250 (406)
                      +|+|||||++||||+++|||||||||||||||+|++|||||||||||+||+|+|+|||+||++||||||||||+++++ +
T Consensus        81 ~w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~~~  160 (294)
T PF05212_consen   81 EWDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSSEI  160 (294)
T ss_pred             chhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCcee
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999875 9


Q ss_pred             ceeeeeecCCcceeeeeccccCccCCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeE
Q 015489          251 TWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKI  330 (406)
Q Consensus       251 sh~iT~R~~~~~vHr~~~~~~g~C~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~ki  330 (406)
                      ||+||+|++++++||.+.+++++|+++++||||||||||||||||+|||||||||||||+|||||||+|++|++.+++||
T Consensus       161 ~~~iT~R~~~~~vhr~~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~~~~~~ki  240 (294)
T PF05212_consen  161 HHPITKRRPDSEVHRKTRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCAGDRHKKI  240 (294)
T ss_pred             eeeEEeecCCceeEeccCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHhccccccE
Confidence            99999999999999988888888999999999999999999999999999999999999999999999999998889999


Q ss_pred             EEEeeeeEEeecCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015489          331 GVVDAQWIVHQGVPSLGNQGQPHDGRAPWEAVRERCKNEWEMFKDRMTSAEKAY  384 (406)
Q Consensus       331 GVVDa~~VvH~g~PtLg~~g~~~~~~~~~~~vR~r~~~E~~~F~~R~~~A~k~~  384 (406)
                      ||||||||+|+++|||||||.+.++..+|.+||+||++||++|++||++|+|+|
T Consensus       241 GVVDs~~VvH~gvptLG~~~~~~~~~~~~~~Vr~r~~~E~~~F~~R~~~a~~~~  294 (294)
T PF05212_consen  241 GVVDSQYVVHTGVPTLGGQGNSEKGKDPREEVRRRSFAEMRIFQKRWANAVKEY  294 (294)
T ss_pred             EEEeeEEEEEcCCCcCCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999999999987

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=94.35  E-value=1.1  Score=42.78  Aligned_cols=171  Identities=13%  Similarity=0.037  Sum_probs=91.0

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCCC--cceeeeee-cC---Ccceeeeeccc--cCccCC-
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGW--LTWQMTKR-RN---DTEVHTQTEER--EGWCAE-  276 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S~--ish~iT~R-~~---~~~vHr~~~~~--~g~C~~-  276 (406)
                      +..|||++.|+|..++..-++++++.+....-.+.-|.+..-..  ..+.-... ..   ...++..-...  ...+.. 
T Consensus        82 A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (299)
T cd02510          82 ATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRES  161 (299)
T ss_pred             ccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcC
Confidence            67999999999999999999999999998887777787653321  11211110 00   00111100000  000000 


Q ss_pred             CCCCCCcceEEEeeccccHHHHHHHhhhhcCCCcceeh-hhhhchhhhcCCCCeEEEEeeeeEEeecC-CCCCCCCCCCC
Q 015489          277 THEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDAQWIVHQGV-PSLGNQGQPHD  354 (406)
Q Consensus       277 ~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWG-LDf~~~~C~~~~~~kiGVVDa~~VvH~g~-PtLg~~g~~~~  354 (406)
                      +..+..+.++=..+=+++|++|.-+=.| . .....|| =|.-+..=+.-...+|-++-...|.|... +.-+....   
T Consensus       162 ~~~~~~~~~~~g~~~~irr~~~~~vGgf-D-e~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~~~~~~~~~~---  236 (299)
T cd02510         162 PTAPIRSPTMAGGLFAIDREWFLELGGY-D-EGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPYTFP---  236 (299)
T ss_pred             CCCCccCccccceeeEEEHHHHHHhCCC-C-CcccccCchhHHHHHHHHHcCCeEEEeeccEEEEeccccCCCCCCC---
Confidence            1111122233233446899999887443 2 3335665 35443212222457899999999999765 44322111   


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015489          355 GRAPWEAVRERCKNEWEMFKDRMTSAEKAYLEA  387 (406)
Q Consensus       355 ~~~~~~~vR~r~~~E~~~F~~R~~~A~k~~~~~  387 (406)
                      .+  ..    +.......|.++|-+..+.++..
T Consensus       237 ~~--~~----~~~~n~~r~~~~w~~~~~~~~~~  263 (299)
T cd02510         237 GG--SG----TVLRNYKRVAEVWMDEYKEYFYK  263 (299)
T ss_pred             Cc--cc----HHHHHHHHHHHHHHHHHHHHHHh
Confidence            11  00    22234456777777666666644

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=94.18  E-value=0.11  Score=42.96  Aligned_cols=91  Identities=20%  Similarity=0.126  Sum_probs=61.5

Q ss_pred             CccEEEEecCcccCCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeeeeccccCccCCCCCCCCcce
Q 015489          207 SYDYIFIWDEDLGVENFNGEEYIKLVRKH-GLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAF  285 (406)
Q Consensus       207 ~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~ppcTgF  285 (406)
                      .+|||++.|+|...+...+.++.+.+.+. +..+..+.                   +                  +   
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~-------------------~------------------~---  113 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK-------------------V------------------S---  113 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc-------------------C------------------c---
Confidence            79999999999999888788887754433 33333222                   0                  0   


Q ss_pred             EEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEee
Q 015489          286 VEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQ  341 (406)
Q Consensus       286 VEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~  341 (406)
                        ..+.+|++++|+-+-.+  ++....+|-|..+...+.....+|..+....+.|.
T Consensus       114 --~~~~~~~~~~~~~~~~~--~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~~~~h~  165 (166)
T cd04186         114 --GAFLLVRREVFEEVGGF--DEDFFLYYEDVDLCLRARLAGYRVLYVPQAVIYHH  165 (166)
T ss_pred             --eeeEeeeHHHHHHcCCC--ChhhhccccHHHHHHHHHHcCCeEEEccceEEEec
Confidence              12357899999865322  23223477787776555545679999999999995

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=94.13  E-value=0.23  Score=46.62  Aligned_cols=128  Identities=11%  Similarity=0.012  Sum_probs=72.3

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHh--CCcccCCCc-cCCCCcceeeeeecCCcceeeeeccccCccCCCCCCCC
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKH--GLEISQPGL-EPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPC  282 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~--gLeISQPAL-d~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~ppc  282 (406)
                      +.+|||++.|+|..++.-.++++++.+++.  +.-+..|.. +.+.....+..... +... +..     ...+.+.+.-
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-----~~~~~~~~~~  144 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTSRRLPAIHLD-GLLL-RQI-----SLDGLTTPQK  144 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCcccCCceeec-ccce-eee-----cccccCCcee
Confidence            379999999999999988899999988876  567777764 22221112211111 1100 000     0001111100


Q ss_pred             cceEEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEeec
Q 015489          283 AAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQG  342 (406)
Q Consensus       283 TgFVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~g  342 (406)
                      +.++=.-..+++|++++.+=. +..++ -.++.|.-|..=+.....++.++....+.|..
T Consensus       145 ~~~~~~sg~li~~~~~~~iG~-fde~~-fi~~~D~e~~~R~~~~G~~i~~~~~~~~~H~~  202 (281)
T TIGR01556       145 TSFLISSGCLITREVYQRLGM-MDEEL-FIDHVDTEWSLRAQNYGIPLYIDPDIVLEHRI  202 (281)
T ss_pred             ccEEEcCcceeeHHHHHHhCC-ccHhh-cccchHHHHHHHHHHCCCEEEEeCCEEEEEec
Confidence            111100123689999988732 33343 24667776633333346799999999999963

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=93.55  E-value=0.25  Score=43.32  Aligned_cols=100  Identities=18%  Similarity=0.189  Sum_probs=66.8

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCCCcceeeeeecCCcceeeeeccccCccCCCCCCCCcce
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAF  285 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~ppcTgF  285 (406)
                      +.+||+++.|+|..++.-.++++.+.++..++.+..|.......                               ++.+ 
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~-  125 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG-------------------------------SFVG-  125 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC-------------------------------ceEE-
Confidence            57999999999999998888888888775555555443322110                               1112 


Q ss_pred             EEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEeecCCC
Q 015489          286 VEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPS  345 (406)
Q Consensus       286 VEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~g~Pt  345 (406)
                           -+++|++|+.+ .+. .+.-..||=|.-+..-+.....++ .+.+..+.|....+
T Consensus       126 -----~~~~~~~~~~~-g~~-~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~  177 (202)
T cd04185         126 -----VLISRRVVEKI-GLP-DKEFFIWGDDTEYTLRASKAGPGI-YVPDAVVVHKTAIN  177 (202)
T ss_pred             -----EEEeHHHHHHh-CCC-ChhhhccchHHHHHHHHHHcCCcE-EecceEEEEccccc
Confidence                 24889999766 332 333457887876654444456788 99999999976544

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=93.37  E-value=0.27  Score=44.01  Aligned_cols=123  Identities=17%  Similarity=0.089  Sum_probs=62.0

Q ss_pred             CccEEEEecCcccCCCCChHHHH---HHHH-HhCCcccCCCccCCCC-cceeeeeecCCcceeeeeccccCccCCCCCCC
Q 015489          207 SYDYIFIWDEDLGVENFNGEEYI---KLVR-KHGLEISQPGLEPNGW-LTWQMTKRRNDTEVHTQTEEREGWCAETHEPP  281 (406)
Q Consensus       207 ~YDYIflwDDDL~vd~f~i~ry~---~Ivr-~~gLeISQPALd~~S~-ish~iT~R~~~~~vHr~~~~~~g~C~~~~~pp  281 (406)
                      .||||++.|+|..++...+++++   +..+ ...+-+..|....... ..... .+.....+.  ...    +.   ..+
T Consensus        75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~----~~---~~~  144 (237)
T cd02526          75 GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPG-VRKSGYKLR--IQK----EG---EEG  144 (237)
T ss_pred             CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccc-eeccCccce--ecc----cc---cCC
Confidence            68999999999999988888875   2221 2234455554432211 11100 011110000  000    00   000


Q ss_pred             CcceEEEe--eccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEee
Q 015489          282 CAAFVEIM--ATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQ  341 (406)
Q Consensus       282 cTgFVEiM--APVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~  341 (406)
                      +...-.++  +-+|+|++++.+=.+ ..++ ...|-|+.|..-+.-...++..+....|.|.
T Consensus       145 ~~~~~~~~~~~~~~rr~~~~~~ggf-d~~~-~~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~  204 (237)
T cd02526         145 LKEVDFLITSGSLISLEALEKVGGF-DEDL-FIDYVDTEWCLRARSKGYKIYVVPDAVLKHE  204 (237)
T ss_pred             ceEeeeeeccceEEcHHHHHHhCCC-CHHH-cCccchHHHHHHHHHcCCcEEEEcCeEEEec
Confidence            10000111  125899999887443 2232 2335566665444445678998888888885

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=90.74  E-value=0.67  Score=41.33  Aligned_cols=127  Identities=18%  Similarity=0.106  Sum_probs=64.9

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCCCcceeeeeecCCcceeeeeccccCccCCC-CCCCCcc
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAET-HEPPCAA  284 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~-~~ppcTg  284 (406)
                      ..+|||++.|+|..++...+.++++.+...+..+.|+....... ...++.-......+.......+  ... ...+|+|
T Consensus        85 ~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~G  161 (228)
T PF13641_consen   85 ARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDND-RNWLTRLQDLFFARWHLRFRSG--RRALGVAFLSG  161 (228)
T ss_dssp             ---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTC-CCEEEE-TT--S-EETTTS-TT---B----S-B--
T ss_pred             cCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCC-CCHHHHHHHHHHhhhhhhhhhh--hcccceeeccC
Confidence            45999999999999999999999999977888888866644321 1112211111100000000000  000 1111221


Q ss_pred             eEEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEeecC
Q 015489          285 FVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGV  343 (406)
Q Consensus       285 FVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~g~  343 (406)
                          -+=+|+|++++-+-.+  +.  ..-|=|+.+..-+.....++.......|.|...
T Consensus       162 ----~~~~~rr~~~~~~g~f--d~--~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~  212 (228)
T PF13641_consen  162 ----SGMLFRRSALEEVGGF--DP--FILGEDFDLCLRLRAAGWRIVYAPDALVYHEEP  212 (228)
T ss_dssp             ----TEEEEEHHHHHHH-S----S--SSSSHHHHHHHHHHHTT--EEEEEEEEEEE--S
T ss_pred             ----cEEEEEHHHHHHhCCC--CC--CCcccHHHHHHHHHHCCCcEEEECCcEEEEeCC
Confidence                2337899999888543  23  344578777655555678999999888999633

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=89.44  E-value=0.42  Score=42.44  Aligned_cols=92  Identities=15%  Similarity=0.168  Sum_probs=56.1

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCCCcceeeeeecCCcceeeeeccccCccCCCCCCCCcce
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAAF  285 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~ppcTgF  285 (406)
                      +.+|||++.|.|..++...+.++++.....+..+.++.                              |       ++| 
T Consensus        85 a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~------------------------------~-------~~g-  126 (196)
T cd02520          85 ARYDILVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL------------------------------C-------AFG-  126 (196)
T ss_pred             CCCCEEEEECCCceEChhHHHHHHHHhhCCCCCeEEee------------------------------c-------ccC-
Confidence            57999999999998877777777665432222222211                              0       111 


Q ss_pred             EEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEee
Q 015489          286 VEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQ  341 (406)
Q Consensus       286 VEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~  341 (406)
                         .+-+|+|++|+.+=.+  .....-++=|+.+..-+.....++..++.. ++|.
T Consensus       127 ---~~~~~r~~~~~~~ggf--~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~-~~~~  176 (196)
T cd02520         127 ---KSMALRREVLDAIGGF--EAFADYLAEDYFLGKLIWRLGYRVVLSPYV-VMQP  176 (196)
T ss_pred             ---ceeeeEHHHHHhccCh--HHHhHHHHHHHHHHHHHHHcCCeEEEcchh-eecc
Confidence               2347899999876433  111123466887776666567899888775 5553

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=88.09  E-value=2.2  Score=39.34  Aligned_cols=107  Identities=22%  Similarity=0.215  Sum_probs=60.9

Q ss_pred             CCceEEEEEeccccccchhHHhhccc------cCcEEEEEEECCCCCccccc--cc----ccceEEEEe--ecccccccc
Q 015489          131 RPKYLVTFTVGFDLKHNIDAAVKKFS------ENFTIMLFHYDGRTSDWEEF--EW----SKRAIHVSA--RKQTKWWYA  196 (406)
Q Consensus       131 ~~k~Lla~~VG~~qk~~vd~~v~kf~------~nF~vmLFhYDG~~~~W~d~--eW----s~~aiHv~a--~kqtKWw~a  196 (406)
                      .++..|++++ ++....+..+++...      .+|.|+ +-=||+.|+=.++  ++    ....+++..  .+++|---.
T Consensus         8 ~~~vsVvIp~-yne~~~l~~~l~~l~~~~~~~~~~eii-vvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a~   85 (243)
T PLN02726          8 AMKYSIIVPT-YNERLNIALIVYLIFKALQDVKDFEII-VVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGTAY   85 (243)
T ss_pred             CceEEEEEcc-CCchhhHHHHHHHHHHHhccCCCeEEE-EEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCCHHHHH
Confidence            4567777776 666666655444331      266666 4568887642211  11    111233322  223321111


Q ss_pred             ccccCcccccCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCC
Q 015489          197 KRFLHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQP  242 (406)
Q Consensus       197 kRFLHPdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQP  242 (406)
                      +.-+   -.+..|||++.|.|...+.-.++++++.+.+.+.++...
T Consensus        86 n~g~---~~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g  128 (243)
T PLN02726         86 IHGL---KHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTG  128 (243)
T ss_pred             HHHH---HHcCCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEE
Confidence            1111   135789999999999988888888898887777666544

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=87.60  E-value=0.99  Score=40.21  Aligned_cols=125  Identities=12%  Similarity=0.000  Sum_probs=65.6

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCC-CcceeeeeecCCcceeeeeccccCccCCC---CCCC
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNG-WLTWQMTKRRNDTEVHTQTEEREGWCAET---HEPP  281 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S-~ish~iT~R~~~~~vHr~~~~~~g~C~~~---~~pp  281 (406)
                      +.+|||.+.|+|..++...++++++..++.+..+.+....... ........+.....+..   .....+...   ...+
T Consensus        80 a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  156 (249)
T cd02525          80 SRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLGS---GGSAYRGGAVKIGYVD  156 (249)
T ss_pred             hCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHHHHHHHhhchhcc---CCcccccccccccccc
Confidence            3799999999999998888999998888777776655432211 10000000000000000   000000000   0001


Q ss_pred             CcceEEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEee
Q 015489          282 CAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQ  341 (406)
Q Consensus       282 cTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~  341 (406)
                      +.++     =+|+|++|+.+=.+ ...  ...|-|+.+..-+.....++..+....+.|.
T Consensus       157 ~~~~-----~~~~~~~~~~~g~~-~~~--~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~~  208 (249)
T cd02525         157 TVHH-----GAYRREVFEKVGGF-DES--LVRNEDAELNYRLRKAGYKIWLSPDIRVYYY  208 (249)
T ss_pred             cccc-----ceEEHHHHHHhCCC-Ccc--cCccchhHHHHHHHHcCcEEEEcCCeEEEEc
Confidence            1111     15799999876322 222  2346676554333334678999998888885

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis

Probab=84.20  E-value=0.62  Score=40.58  Aligned_cols=116  Identities=14%  Similarity=0.084  Sum_probs=62.0

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHh-CCcccCCCccCCC--CcceeeeeecCCcceeeeecc-ccCccCCCCCCC
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKH-GLEISQPGLEPNG--WLTWQMTKRRNDTEVHTQTEE-REGWCAETHEPP  281 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~S--~ish~iT~R~~~~~vHr~~~~-~~g~C~~~~~pp  281 (406)
                      +.+|||++.|+|..++.-.+++.++.++++ +..+..+....-.  ...+.... .+..  .+.... ....|.      
T Consensus        79 a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~------  149 (201)
T cd04195          79 CTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR-LPTS--HDDILKFARRRSP------  149 (201)
T ss_pred             cCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc-CCCC--HHHHHHHhccCCC------
Confidence            579999999999999888888888887654 5666555432211  11111110 0000  000000 001111      


Q ss_pred             CcceEEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeE
Q 015489          282 CAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWI  338 (406)
Q Consensus       282 cTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~V  338 (406)
                          +..++=+|+|++++.+-.+-  ..  -++-|+.+...+.....++..+....+
T Consensus       150 ----~~~~~~~~rr~~~~~~g~~~--~~--~~~eD~~~~~r~~~~g~~~~~~~~~~~  198 (201)
T cd04195         150 ----FNHPTVMFRKSKVLAVGGYQ--DL--PLVEDYALWARMLANGARFANLPEILV  198 (201)
T ss_pred             ----CCChHHhhhHHHHHHcCCcC--CC--CCchHHHHHHHHHHcCCceecccHHHh
Confidence                11112368999998875542  22  467787766554334567777655443

AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=82.16  E-value=1.5  Score=37.27  Aligned_cols=36  Identities=11%  Similarity=-0.045  Sum_probs=26.6

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHH-HHhCCcccC
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLV-RKHGLEISQ  241 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Iv-r~~gLeISQ  241 (406)
                      +..|||++.|+|..++.-.+.+.++.. +..+..+..
T Consensus        74 a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~  110 (202)
T cd06433          74 ATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVY  110 (202)
T ss_pred             cCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEE
Confidence            468999999999999988888888444 333444443

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=80.23  E-value=8.8  Score=37.22  Aligned_cols=137  Identities=21%  Similarity=0.064  Sum_probs=84.3

Q ss_pred             ccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCCCcceeeeeecCCcceeeeeccccCccCC-----CCCCCC
Q 015489          208 YDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAE-----THEPPC  282 (406)
Q Consensus       208 YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~-----~~~ppc  282 (406)
                      |+|++++++|..++...++++++.+++.+-...-+++-.+..-...+..+........ .......+..     ...+.|
T Consensus        85 ~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  163 (305)
T COG1216          85 DDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRGGESDGLT-GGWRASPLLEIAPDLSSYLEV  163 (305)
T ss_pred             CcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheecccccccc-ccceecccccccccccchhhh
Confidence            5599999999999999999999999999887777776654322222222211000000 0000111111     112334


Q ss_pred             cceEEEeeccccHHHHHHHhhhhcCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEeecCCCCC
Q 015489          283 AAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGVPSLG  347 (406)
Q Consensus       283 TgFVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~g~PtLg  347 (406)
                      ..++..-+-+++|++++-+=.+ ..+. =.+.-|.-|..=+.-...++..+=.-.|.|..--+.+
T Consensus       164 ~~~~~G~~~li~~~~~~~vG~~-de~~-F~y~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s~~  226 (305)
T COG1216         164 VASLSGACLLIRREAFEKVGGF-DERF-FIYYEDVDLCLRARKAGYKIYYVPDAIIYHKIGSSKG  226 (305)
T ss_pred             hhhcceeeeEEcHHHHHHhCCC-Cccc-ceeehHHHHHHHHHHcCCeEEEeeccEEEEeccCCCC
Confidence            4467777788999999887543 2333 3666776664444445568999999999997555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	406
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	92.06
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	88.99
3f1y_A	387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	88.89
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	88.82
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	88.25
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	81.1

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=92.06  E-value=0.31  Score=42.57  Aligned_cols=125  Identities=9%  Similarity=-0.089  Sum_probs=66.3

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeeeeccccCccCCCCCCCCcc
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKH-GLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEEREGWCAETHEPPCAA  284 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~~~g~C~~~~~ppcTg  284 (406)
                      +..|||++.|+|..++.-.++++++.++++ +..+..+....-       .....+..+..........-...     ..
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-----~~  154 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTY-------HLNENRDIVKETVRPAAQVTWNA-----PC  154 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEE-------EEC---CEEEEEEECCCSCBSCC-----TT
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEE-------EeCCCCcchhhccCchHHHHHhh-----cC
Confidence            578999999999999988899999999876 666655543210       00000111111000000000000     01


Q ss_pred             eEEEeeccccHHHHHHHh-hh--h-cCCCcceehhhhhchhhhcCCCCeEEEEeeeeEEeecC
Q 015489          285 FVEIMATVFSREAWRCVW-YM--I-QNDLVHGWGLDFALRKCVEPAHEKIGVVDAQWIVHQGV  343 (406)
Q Consensus       285 FVEiMAPVFSR~Awrcvw-~m--i-qNDLvhGWGLDf~~~~C~~~~~~kiGVVDa~~VvH~g~  343 (406)
                      ++-..+-+|+|++++.+- .+  . ..+.....+-|+.+...+... .++..++...+.|+..
T Consensus       155 ~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~-g~~~~~~~~~~~~r~~  216 (255)
T 1qg8_A          155 AIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHF-YPFYPLDEELDLNYIT  216 (255)
T ss_dssp             TSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTT-CCBEEEEEEEEEEEEC
T ss_pred             CCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHh-CCEEEecCcEEEEEEc
Confidence            111123478999998764 33  0 112222345676554444323 3699999988888643

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=88.99  E-value=1.1  Score=44.44  Aligned_cols=137  Identities=9%  Similarity=0.039  Sum_probs=73.6

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eecCCcceeeeecccc-----Ccc
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNG--WLTWQMT----KRRNDTEVHTQTEERE-----GWC  274 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S--~ish~iT----~R~~~~~vHr~~~~~~-----g~C  274 (406)
                      +..|||++.|+|..++.-.++++++.+++..-.+..|.++.-.  .+.+.-.    ...-...++.+....+     .+-
T Consensus       145 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (501)
T 2ffu_A          145 AQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQ  224 (501)
T ss_dssp             CCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTS
T ss_pred             cCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhcc
Confidence            5789999999999999999999999999887777777653211  1111000    0000000000000000     000


Q ss_pred             CCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCccee-hhhhhchhhhcCCCCeEEEEeeeeEEeecCC
Q 015489          275 AETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGW-GLDFALRKCVEPAHEKIGVVDAQWIVHQGVP  344 (406)
Q Consensus       275 ~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGW-GLDf~~~~C~~~~~~kiGVVDa~~VvH~g~P  344 (406)
                      .++..+-.+.++-..+=+|+|+++..+=.+  ++....| |=|+-+..-+.....+|.++....|.|..+.
T Consensus       225 ~~~~~~~~~~~~~g~~~~irr~~~~~iGgf--de~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~  293 (501)
T 2ffu_A          225 GNPVAPIKTPMIAGGLFVMDKFYFEELGKY--DMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRK  293 (501)
T ss_dssp             SCTTSCEECSSCCSSSEEEEHHHHHHTTCC--CTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCS
T ss_pred             CCCCCcccCccccceEEEEEHHHHHHhCCC--CccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEccC
Confidence            011111001111111237899999887533  3434567 4555443222224579999999999997544

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*

Probab=88.89  E-value=1.2  Score=43.99  Aligned_cols=193  Identities=10%  Similarity=0.033  Sum_probs=100.8

Q ss_pred             CCceEEEEEeccccccchhHHhhcc-------ccCcEEEEEEECCCCCccccc--ccccceEEEE------eeccccccc
Q 015489          131 RPKYLVTFTVGFDLKHNIDAAVKKF-------SENFTIMLFHYDGRTSDWEEF--EWSKRAIHVS------ARKQTKWWY  195 (406)
Q Consensus       131 ~~k~Lla~~VG~~qk~~vd~~v~kf-------~~nF~vmLFhYDG~~~~W~d~--eWs~~aiHv~------a~kqtKWw~  195 (406)
                      .++..|++++ ++...++..+++..       +.+|.|+ +.=||++|+=.++  ++..+.++..      ..+++|-.-
T Consensus        93 ~p~vSVVIP~-yNe~~~l~~~l~sl~~~l~~~~~~~EII-VVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A  170 (387)
T 3f1y_A           93 GLTVSAVLPS-RNVADTVGGIIDEIHALNERAPLIDQIL-VVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA  170 (387)
T ss_dssp             TCCEEEEEEE-SSCTTTHHHHHHHHHHHHHHSCCCSEEE-EEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred             CCeEEEEEEc-CCCHHHHHHHHHHHHHHHhcCCCCeEEE-EEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence            4677888888 55556666665554       3467776 5668988764432  1222211110      013333222


Q ss_pred             cccccCcccccCccEEEEecCccc-CCCCChHHHHHHHHHh-CCcccCCCccCCCCcceeeeeecCCcceeeeecc----
Q 015489          196 AKRFLHPDIVASYDYIFIWDEDLG-VENFNGEEYIKLVRKH-GLEISQPGLEPNGWLTWQMTKRRNDTEVHTQTEE----  269 (406)
Q Consensus       196 akRFLHPdiva~YDYIflwDDDL~-vd~f~i~ry~~Ivr~~-gLeISQPALd~~S~ish~iT~R~~~~~vHr~~~~----  269 (406)
                      .+.-+   -.+.+|||++.|.|.. ++...+.++++.+.+. +..+................ +.....+.+....    
T Consensus       171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~-~~~~g~v~~~~~~~l~~  246 (387)
T 3f1y_A          171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIE-EDGGGRVTELTAKPLFN  246 (387)
T ss_dssp             HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------C-CBCCSHHHHHTHHHHHH
T ss_pred             HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccc-cccCCchhhhhHHHHHH
Confidence            11111   1257999999999999 8999999999988765 56655543321100000000 1111111100000    


Q ss_pred             --ccCccCCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCcceehhhhhch-hhhcC-CCCeEEEEeeeeEEeec
Q 015489          270 --REGWCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWGLDFALR-KCVEP-AHEKIGVVDAQWIVHQG  342 (406)
Q Consensus       270 --~~g~C~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWGLDf~~~-~C~~~-~~~kiGVVDa~~VvH~g  342 (406)
                        .+..+  .-.-|+++|.     +|+|++++.+ .+     ..|||.|..+. +++.. .-++|.=|+-.+..|..
T Consensus       247 ~~~~~l~--~~~d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~  310 (387)
T 3f1y_A          247 LFYPELA--GFVQPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH  310 (387)
T ss_dssp             HHCGGGT--TCSCTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred             HHhHhhc--cccccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence              00000  1112234442     6899999876 33     36899987653 33222 22358888888888853

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=88.82  E-value=0.51  Score=46.09  Aligned_cols=138  Identities=9%  Similarity=0.007  Sum_probs=70.3

Q ss_pred             cCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCC--CCccee----eeeecCCcceeeeeccccC-----cc
Q 015489          206 ASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPN--GWLTWQ----MTKRRNDTEVHTQTEEREG-----WC  274 (406)
Q Consensus       206 a~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~--S~ish~----iT~R~~~~~vHr~~~~~~g-----~C  274 (406)
                      +..|||++.|+|..++.-.++++++.+++..-.+..|.++.-  ..+.+.    .+...-...++.+....+.     .-
T Consensus       113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (472)
T 1xhb_A          113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK  192 (472)
T ss_dssp             CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTT
T ss_pred             ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhccc
Confidence            568999999999999999999999999887665655654311  111110    0000000000000000000     00


Q ss_pred             CCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCcceeh-hhhhchhhhcCCCCeEEEEeeeeEEeecCCC
Q 015489          275 AETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDAQWIVHQGVPS  345 (406)
Q Consensus       275 ~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWG-LDf~~~~C~~~~~~kiGVVDa~~VvH~g~Pt  345 (406)
                      .+...+-.+.++-..+=+|+|++|+.+=.+  ++....|| =|+-+..-+.....++.++....|.|....+
T Consensus       193 ~~~~~~~~~~~~~g~~~~irr~~~~~iGgf--de~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~  262 (472)
T 1xhb_A          193 GDRTLPVRTPTMAGGLFSIDRDYFQEIGTY--DAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA  262 (472)
T ss_dssp             TCTTSCEECSBCCSSSEEEEHHHHHHTTSC--CTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred             CCCCCcccCccccceeEEEEHHHHHHcCCC--CCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCc
Confidence            000001011111111235799999887433  33334664 3433332222245799999999999976554

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=88.25  E-value=1.2  Score=45.42  Aligned_cols=211  Identities=10%  Similarity=0.039  Sum_probs=100.2

Q ss_pred             CCceEEEEEeccccccc----hhHHhhccccC--cEEEEEEECCCCCcc-cc-c-cccc--ceEEEEeeccccccccccc
Q 015489          131 RPKYLVTFTVGFDLKHN----IDAAVKKFSEN--FTIMLFHYDGRTSDW-EE-F-EWSK--RAIHVSARKQTKWWYAKRF  199 (406)
Q Consensus       131 ~~k~Lla~~VG~~qk~~----vd~~v~kf~~n--F~vmLFhYDG~~~~W-~d-~-eWs~--~aiHv~a~kqtKWw~akRF  199 (406)
                      .|+.-|++++=-.....    ++++.+.=..+  |.|+ +.=||+.|+- .+ + ++..  .-|++...... -=++...
T Consensus       111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EII-VVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~~~A~  188 (570)
T 2d7i_A          111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIV-LVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGLIRTR  188 (570)
T ss_dssp             CCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEE-EEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCHHHHH
T ss_pred             CCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEE-EEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCHHHHH
Confidence            45677777774332133    33333332334  4666 5568887765 21 1 1100  12443322111 0011111


Q ss_pred             cCcccccCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCC--Ccceeee----eecC-Cccee-eeecccc
Q 015489          200 LHPDIVASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNG--WLTWQMT----KRRN-DTEVH-TQTEERE  271 (406)
Q Consensus       200 LHPdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S--~ish~iT----~R~~-~~~vH-r~~~~~~  271 (406)
                      ..-=-.+..|||++.|+|..++.-.++++++.+++..--+..|.++.-.  .+.+...    .+.. ...+. ++.....
T Consensus       189 N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (570)
T 2d7i_A          189 MLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPP  268 (570)
T ss_dssp             HHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCT
T ss_pred             HHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccch
Confidence            1111235689999999999999999999999998765445555442111  1111100    0000 00000 0000000


Q ss_pred             C-ccCCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCccee-hhhhhchhhhcCCCCeEEEEeeeeEEeecCCC
Q 015489          272 G-WCAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGW-GLDFALRKCVEPAHEKIGVVDAQWIVHQGVPS  345 (406)
Q Consensus       272 g-~C~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGW-GLDf~~~~C~~~~~~kiGVVDa~~VvH~g~Pt  345 (406)
                      . .-.++..+--+.++-..+=+|+|++|+.+=.+  ++....| |=|+-+..-+.....+|.++....|.|..+..
T Consensus       269 ~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgf--De~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~  342 (570)
T 2d7i_A          269 ELQKADPSDPFESPVMAGGLFAVDRKWFWELGGY--DPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKY  342 (570)
T ss_dssp             TTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSS--CTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSS
T ss_pred             hhhccCCCcceecccccceEEEEEHHHHHhcCCC--CCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcccc
Confidence            0 00000001011111122346899999887443  3444567 44555443333356799999999999975544

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=81.10  E-value=13  Score=37.47  Aligned_cols=99  Identities=18%  Similarity=0.112  Sum_probs=55.7

Q ss_pred             CCceEEEEEeccccccchhHHhhccc----cCcEEEEEEECCCCCcccc-c-cc---ccceEEEEeeccccccccccccC
Q 015489          131 RPKYLVTFTVGFDLKHNIDAAVKKFS----ENFTIMLFHYDGRTSDWEE-F-EW---SKRAIHVSARKQTKWWYAKRFLH  201 (406)
Q Consensus       131 ~~k~Lla~~VG~~qk~~vd~~v~kf~----~nF~vmLFhYDG~~~~W~d-~-eW---s~~aiHv~a~kqtKWw~akRFLH  201 (406)
                      .++.-+++++ ++....+..+++-.-    .+|.|++ .=||+.|+=.+ + ++   ..+...+...++++-.-.+.-+ 
T Consensus       374 ~~~vsiii~~-yn~~~~l~~~l~s~~~q~~~~~eiiv-vdd~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n~g~-  450 (625)
T 2z86_A          374 VPLVSIYIPA-YNCSKYIVRCVESALNQTITDLEVCI-CDDGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAV-  450 (625)
T ss_dssp             SCSEEEEEEE-SSCTTTHHHHHHHHHSSSCCSEEEEE-EEESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHHHHH-
T ss_pred             CCeEEEEEeC-CCCHHHHHHHHHHHHhCcCCCeEEEE-EECcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHHHHH-
Confidence            4556666665 555566666655552    5788774 45677764221 1 11   1122333333333211111111 


Q ss_pred             cccccCccEEEEecCcccCCCCChHHHHHHHHH
Q 015489          202 PDIVASYDYIFIWDEDLGVENFNGEEYIKLVRK  234 (406)
Q Consensus       202 Pdiva~YDYIflwDDDL~vd~f~i~ry~~Ivr~  234 (406)
                        -.+..|||++.|+|..++.-.++++++.+++
T Consensus       451 --~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~  481 (625)
T 2z86_A          451 --RLCRGFYIGQLDSDDFLEPDAVELCLDEFRK  481 (625)
T ss_dssp             --HHCCSSEEEECCTTCEECTTHHHHHHHHHHH
T ss_pred             --HhcCCCEEEEECCCcccChhHHHHHHHHHHh
Confidence              1257899999999999888888888877654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	406
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	89.92

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.92  E-value=0.36  Score=42.21  Aligned_cols=140  Identities=9%  Similarity=-0.003  Sum_probs=74.2

Q ss_pred             ccCccEEEEecCcccCCCCChHHHHHHHHHhCCcccCCCccCCCCcceee------eeec--CCcceeeeecc---ccCc
Q 015489          205 VASYDYIFIWDEDLGVENFNGEEYIKLVRKHGLEISQPGLEPNGWLTWQM------TKRR--NDTEVHTQTEE---REGW  273 (406)
Q Consensus       205 va~YDYIflwDDDL~vd~f~i~ry~~Ivr~~gLeISQPALd~~S~ish~i------T~R~--~~~~vHr~~~~---~~g~  273 (406)
                      .+.-|||++.|+|..++.-.++++++.+++..-.+..|.++.-..-++..      +...  .....+.....   ....
T Consensus       105 ~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (328)
T d1xhba2         105 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRR  184 (328)
T ss_dssp             HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHT
T ss_pred             hhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhcc
Confidence            46789999999999999999999999999988887777653211111110      0000  00111110000   0001


Q ss_pred             cCCCCCCCCcceEEEeeccccHHHHHHHhhhhcCCCcceeh-hhhhchhhhcCCCCeEEEEeeeeEEeecCCCC
Q 015489          274 CAETHEPPCAAFVEIMATVFSREAWRCVWYMIQNDLVHGWG-LDFALRKCVEPAHEKIGVVDAQWIVHQGVPSL  346 (406)
Q Consensus       274 C~~~~~ppcTgFVEiMAPVFSR~Awrcvw~miqNDLvhGWG-LDf~~~~C~~~~~~kiGVVDa~~VvH~g~PtL  346 (406)
                      ..+...+..+.++-..+=.++|++|.-+=.+  ++....|| =|.-+..-+.....+|..+-...|.|..+-+.
T Consensus       185 ~~~~~~~~~~~~~~g~~~~irr~~f~~vGgf--De~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~~v~H~~~~~~  256 (328)
T d1xhba2         185 KGDRTLPVRTPTMAGGLFSIDRDYFQEIGTY--DAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKAT  256 (328)
T ss_dssp             TTCTTSCEECSBCCSSSEEEEHHHHHHTTSC--CTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC----
T ss_pred             ccccccccccceecceeeeeeHHHHHHhCCC--CCCCcCcCchHHHHHHHHHHhCCeEEEeCCeEEEEeCCCCC
Confidence            1111222222222222235799999887332  34344565 34433222323457999999999999755443