Citrus Sinensis ID: 015504

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
Protein Sequence
MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIELLQMKLLCINVHN
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHEEEHHHHHHHHHHHHHHHHHHHHcccHHEEEHHHEHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHEcccccHHHHccHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mgwkyqagLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKnlfgnrsltststgldiplksnelnnSLETDLRsslmmdkdlsereegwpliaksdkdephvlEQRSELSSWAIAKCSLYLTPIWFITEYfsnsalantsVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKtwaadeflsasesrrhnitGDIFGLLSAITYGLFTVLLKksagsegdkvdVQKFFGYIGLFTFLGLWWLIwplnaagieppfrfphsqsvGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIELLQMKLLCINVHN
Flexible Loop (DISEMBL)
MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNlfgnrsltststgldiplksnelnnsLETDLRSSLMMDKDLSEREEGWPliaksdkdephVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIELLQMKLLCINVHN
Low Complexity Region (SEG)
MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANtsvasttvltstsglftlffgallgQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIELLQMKLLCINVHN
Disordered region (IsUnstruct)
**WKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLFGNRSL************************************************************LSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIELLQMKLLCINV**
Disordered Region (DISOPRED)
*GWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLFGNRSLTSTSTG***************************************************RSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAA*******ESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL****************C*****
Disordered Region (DISEMBL)
MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIELLQMKLLCINVHN
Disordered Region (DISPRO)
MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLF****************************************************************ELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKT*************RHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIELLQMKLLCINVHN
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIELLQMKLLCINVHN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	405	2.2.26 [Sep-21-2011]
A6QL92	524	Solute carrier family 35	yes	no	0.869	0.671	0.315	9e-42
Q8R314	524	Solute carrier family 35	yes	no	0.859	0.664	0.307	7e-40
Q5R6J3	523	Solute carrier family 35	yes	no	0.874	0.676	0.300	1e-39
Q8WV83	523	Solute carrier family 35	yes	no	0.876	0.678	0.283	5e-39
Q03730	393	Uncharacterized vacuolar	yes	no	0.859	0.885	0.304	1e-38
Q4R794	432	Solute carrier family 35	N/A	no	0.696	0.652	0.337	5e-35
Q04083	370	Thiamine-repressible mito	no	no	0.567	0.621	0.345	8e-28
O94654	341	Uncharacterized transport	yes	no	0.609	0.724	0.355	4e-27

>sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1

 Score =  171 bits (433), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 214/406 (52%), Gaps = 54/406 (13%)

Query: 17  LIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALL-----RDCFCSLLDKN--IF 69
           +IW+ S+E+T  +FT+Y +PF  T+   S+ V+YL   ++     + C      K+   F
Sbjct: 81  VIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIVWKPWRQQCTRGFRGKHATFF 140

Query: 70  KNLFGNRSLTSTSTGLD--------IPLKSNEL------NNSLETD-------LRSSLMM 108
            +  G  +  +T T ++        +P+K ++L      N +++T+       +R S +M
Sbjct: 141 ADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSEKPENTNIDTEKIPKKSRVRFSNIM 200

Query: 109 DKDLSEREEGWPLIAK-SDKDEPHVLEQRS------ELSSWAIAKCSLYLTPIWFITEYF 161
             ++ +      L AK S    P V EQ S      +L++  +AK S +   +WF+  + 
Sbjct: 201 --EIRQLPSSHALEAKLSRMSYPTVKEQESLLKTVGKLTATQVAKISFFFCFVWFLANFS 258

Query: 162 SNSALANTSVASTTVLTSTSGLFTLFFGALLGQ---DSITIAKLVAVFISMAGVAMTTVG 218
              AL++T VA   +L+STSGLFTL   A+      D  T++KL+AV +S+ GV +    
Sbjct: 259 YQEALSDTQVAIVNILSSTSGLFTLILAAMFPSNSGDRFTLSKLLAVILSIGGVVLVN-- 316

Query: 219 KTWAADEFLSASE-SRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYI 277
                   LS SE S   N  G I+ L+ A+ Y ++ V++K+    E DK+D+  FFG++
Sbjct: 317 --------LSGSEKSPGRNTIGSIWSLVGAMLYAVYIVMIKRKVDRE-DKLDIPMFFGFV 367

Query: 278 GLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTP 337
           GLF  L LW   + L+  G E  F FP+ + V   +++NG +G+VLS++ W      T+ 
Sbjct: 368 GLFNLLLLWPGFFLLHYTGFE-DFEFPN-KVVLMCIVINGLIGTVLSEFLWLWGCFLTSS 425

Query: 338 LVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL 383
           L+ TL +SLT+PL+++ADM +    +S ++  G + VF  F IA L
Sbjct: 426 LIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIATL 471

Putative solute transporter.
Bos taurus (taxid: 9913)

>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1

 Score =  165 bits (417), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 205/410 (50%), Gaps = 62/410 (15%)

Query: 17  LIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYL--------------------PVALL 56
           +IW+ S+E+T  +FT+Y +PF  T+   S+ V+YL                    P A  
Sbjct: 81  VIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQCTRGFRGKPAAFF 140

Query: 57  RDC------------FCSLLDKNIFKNL----FGNRSLTSTSTGLD-IPLKSN-ELNNSL 98
            D               S L + ++  +      +  L ST+ G +  P KS    +N +
Sbjct: 141 ADAEGYFAACTTDTSMSSSLSEPLYVPVKFHDLPSEKLESTNIGTEKTPKKSRVRFSNIM 200

Query: 99  E-TDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFI 157
           E   L SS  ++  LS     +P +    KD+  +L+   +L++  +AK S +   +WF+
Sbjct: 201 EIRQLPSSHALEAKLSRMS--YPTV----KDQESILKTVGKLTATQVAKISFFFCFVWFL 254

Query: 158 TEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQ---DSITIAKLVAVFISMAGVAM 214
                  AL++T VA   +L+STSGLFTL   A+      D  T++KL+AV +S+ GV +
Sbjct: 255 ANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVL 314

Query: 215 TTVGKTWAADEFLSASE-SRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKF 273
                       LS SE S   +  G I+ L  A+ Y ++ V++K+    E DK+D+  F
Sbjct: 315 VN----------LSGSEKSAGRDTIGSIWSLAGAMFYAVYIVMIKRKVDRE-DKLDIPMF 363

Query: 274 FGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVV 333
           FG++GLF  L LW   + L+  G E  F FP+ + V   +++NG +G+VLS++ W     
Sbjct: 364 FGFVGLFNLLLLWPGFFLLHYTGFED-FEFPN-KVVLLCIIINGLIGTVLSEFLWLWGCF 421

Query: 334 WTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL 383
            T+ L+ TL +SLT+PL+++ADM +    +S ++  G + VF  F I  L
Sbjct: 422 LTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTL 471

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1

 Score =  164 bits (415), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 212/403 (52%), Gaps = 49/403 (12%)

Query: 17  LIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALL-----RDCFCSLLDKN--IF 69
           +IW+ S+E+T  +FT+Y +PF  T+   S+ V+YL   ++     + C   L  K+   F
Sbjct: 81  VIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQCTRGLRGKHAAFF 140

Query: 70  KNLFGNRSLTSTSTGLD--------IPLKSNEL------NNSLETD-------LR-SSLM 107
            +  G  +  +T T ++        +P+K ++L      + +++T+       +R S++M
Sbjct: 141 ADAEGYFAACATDTTMNSSLSEPLYVPVKFHDLPSEKPESTNIDTEKTPKKSRVRFSNIM 200

Query: 108 MDKDLSER---EEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNS 164
             + L      E     ++   K++  +L+   +L++  +AK S +   +WF+       
Sbjct: 201 EIRQLPSNHALESKLSRMSYPVKEQESILKTVGKLTATQVAKISFFFCFVWFLANLSYQE 260

Query: 165 ALANTSVASTTVLTSTSGLFTLFFGALLGQ---DSITIAKLVAVFISMAGVAMTTVGKTW 221
           AL++T VA   +L+STSGLFTL   A+      D  T++KL+AV +S+ GV +       
Sbjct: 261 ALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVN----- 315

Query: 222 AADEFLSASE-SRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLF 280
                LS SE S   +  G I+ L  A+ Y ++ V++K+    E DK+D+  FFG++GLF
Sbjct: 316 -----LSGSEKSAGRDTIGSIWSLAGAMLYAVYIVMIKRKVDRE-DKLDIPMFFGFVGLF 369

Query: 281 TFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVA 340
             L LW   + L+  G E  F FP+ + V   +++NG +G+VLS++ W      T+ L+ 
Sbjct: 370 NLLLLWPGFFLLHYTGFED-FEFPN-KVVLMCIIINGLIGTVLSEFLWLWGCFLTSSLIG 427

Query: 341 TLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL 383
           TL +SLT+PL+++ADM +    +S ++  G + VF  F I  L
Sbjct: 428 TLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTL 470

Putative solute transporter.

Pongo abelii (taxid: 9601)

>sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1

 Score =  162 bits (409), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 205/402 (50%), Gaps = 47/402 (11%)

Query: 17  LIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALL-----RDCFCSLLDKN--IF 69
           +IW+ S+E+T  +FT+Y +PF  T+   S+ V+YL   ++     + C   L  K+   F
Sbjct: 81  VIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQCTRGLRGKHAAFF 140

Query: 70  KNLFGNRSLTSTSTGLD--------IPLKSNELN---------NSLETDLRSSLMMDKDL 112
            +  G  +  +T T ++        +P+K ++L          ++ +T  +S +     +
Sbjct: 141 ADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSEKPESTNIDTEKTPKKSRVRFSNIM 200

Query: 113 SER--------EEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNS 164
             R        E     ++   K++  +L+   +L++  +AK S +   +WF+       
Sbjct: 201 EIRQLPSSHALEAKLSRMSYPVKEQESILKTVGKLTATQVAKISFFFCFVWFLANLSYQE 260

Query: 165 ALANTSVASTTVLTSTSGLFTLFFGALLGQ---DSITIAKLVAVFISMAGVAMTTVGKTW 221
           AL++T VA   +L+STSGLFTL   A+      D  T++KL+AV +S+ GV +  +    
Sbjct: 261 ALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLA--- 317

Query: 222 AADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFT 281
                  + +    +  G I+ L  A+ Y ++ V++K+    E DK+D+  FFG++GLF 
Sbjct: 318 ------GSEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVDRE-DKLDIPMFFGFVGLFN 370

Query: 282 FLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVAT 341
            L LW   + L+  G E  F FP+ + V   +++NG +G+VLS++ W      T+ L+ T
Sbjct: 371 LLLLWPGFFLLHYTGFED-FEFPN-KVVLMCIIINGLIGTVLSEFLWLWGCFLTSSLIGT 428

Query: 342 LGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL 383
           L +SLT+PL+++ADM +    +S ++  G + VF  F I  L
Sbjct: 429 LALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTL 470

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1

 Score =  161 bits (407), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 199/394 (50%), Gaps = 46/394 (11%)

Query: 4   KYQAGLGLIGAFVLIWITSAEITQKIFTE--YRQPFALTYLGVSLMVIYL-PVALLRDCF 60
           ++  GL ++G  +++W+ S+ +   IF +  YR+PF +TY   +  + YL P A  +   
Sbjct: 12  RWTLGLLMLGLVIILWVLSSFLINLIFEDDSYRKPFFITYTNTAAFIFYLFPTA--KAVV 69

Query: 61  CSLLDK---NIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREE 117
            +  D    N+ + L     +    TG D    SN          RS  M    L+  E 
Sbjct: 70  VNYKDTGRANVHRELI----MEEEGTGSD----SN----------RSVDMTSPLLTNLEA 111

Query: 118 GWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVL 177
           G            H   Q+  L+ +   K S     +WF     +N++LA TSVAS T+L
Sbjct: 112 G-----------THA-NQKKRLTLYETIKLSAEFCILWFTANLVTNASLAFTSVASQTIL 159

Query: 178 TSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHN- 236
           ++TS  FTLF GA+   +S++ +K++  FIS  G+ M T   +    +   A  S   N 
Sbjct: 160 STTSSFFTLFIGAICHVESLSKSKVLGSFISFVGIIMVTKSDSHQRYQRHIADVSGDDND 219

Query: 237 ----ITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPL 292
               + G++  L  A+ YG+++ LLK+  G E  +V+++ FFG++GLF  L LW  +  L
Sbjct: 220 AVQVLIGNLLALAGAVLYGVYSTLLKREVGDE-TRVNMKIFFGFVGLFNLLFLWPSLIVL 278

Query: 293 NAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAM 352
           +  G E PF  P    V  ++ +N  + + +SD+ WA +++ T+PL  T+G+S+T+PLAM
Sbjct: 279 DFFGWE-PFSLPKDPKVVVIIFVNCLI-TFVSDFCWAKAMLLTSPLTVTVGLSITIPLAM 336

Query: 353 VADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK 386
             D++   +  SA+Y+FG   +   F I N S +
Sbjct: 337 FGDVIFKHKTMSALYLFGATLILGSFFIINKSSE 370

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q4R794|S35F5_MACFA Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1

 Score =  149 bits (375), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 168/311 (54%), Gaps = 29/311 (9%)

Query: 82  STGLDI---PLKSN-ELNNSLE-TDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQR 136
           ST +D    P KS    +N +E   L SS  ++  LS     +P+     K++  +L+  
Sbjct: 89  STNIDTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRM--SYPV-----KEQESILKTV 141

Query: 137 SELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQ-- 194
            +L++  +AK S +   +WF+       AL++T VA   +L+STSGLFTL   A+     
Sbjct: 142 GKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNS 201

Query: 195 -DSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASE-SRRHNITGDIFGLLSAITYGL 252
            D  T++KL+AV +S+ GV +            LS SE S   N  G I+ L  A+ Y +
Sbjct: 202 GDRFTLSKLLAVILSIGGVVLVN----------LSGSEKSAGRNTIGSIWSLAGAMLYAV 251

Query: 253 FTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEV 312
           + V++K+    E DK+D+  FFG++GLF  L LW   + L+  G E  F FP+ + V   
Sbjct: 252 YIVMIKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPN-KVVLMC 308

Query: 313 LLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCL 372
           +++NG +G+VLS++ W      T+ L+ TL +SLT+PL+++ADM +    +S ++  G +
Sbjct: 309 IIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAI 368

Query: 373 QVFAGFIIANL 383
            VF  F I  L
Sbjct: 369 PVFFSFFIVTL 379

Putative solute transporter.

Macaca fascicularis (taxid: 9541)

>sp|Q04083|THI74_YEAST Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI74 PE=1 SV=1

 Score =  125 bits (313), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 138/237 (58%), Gaps = 7/237 (2%)

Query: 146 KCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAV 205
           + SL    +WF+    +N+AL+ T+VAS+T+L+STS  FTLF    LG ++ +  KL+ +
Sbjct: 119 RLSLLFCVLWFVANLAANAALSYTTVASSTILSSTSSFFTLFLATSLGIETFSTKKLLGL 178

Query: 206 FISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEG 265
           F+S+ G+ +  +  +   D     S S    + G+   LL ++ Y ++T LLK    S+G
Sbjct: 179 FVSLFGIILIVMQSSKQQD-----SVSASSFLVGNTLALLGSLGYSVYTTLLKYEISSKG 233

Query: 266 DKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSD 325
            ++D+Q F GY+G+FTFL  W ++  L+   +E  F  P +  +  +++LN  +  V SD
Sbjct: 234 LRLDIQMFLGYVGIFTFLLFWPILIILDITHME-TFELPSNFHISFLVMLNCIIIFV-SD 291

Query: 326 YFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIAN 382
           YFW  +++ T+PLV T+ ++ T+PLAM AD V     ++  YI G + +F  F + N
Sbjct: 292 YFWCKALILTSPLVVTVALTFTIPLAMFADFVWREAFFTPWYIIGVIFIFVSFFLVN 348

May be involved in thiaminediphosphate transport across the mitochondrial membrane.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O94654|YGF3_SCHPO Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1

 Score =  122 bits (307), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 144/253 (56%), Gaps = 6/253 (2%)

Query: 134 EQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLG 193
              S L     A  SL    IWF   YFSNS+L  T+VAS T+++S SG FTL  G ++ 
Sbjct: 92  RPNSPLGFRQTAYLSLGFCIIWFAANYFSNSSLGFTNVASFTIISSMSGFFTLGLGTIVN 151

Query: 194 QDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLF 253
            +  T++KL+A+  S+ GV +        AD  L+ S   R  +      LL+A+ YG +
Sbjct: 152 VERFTLSKLLALMASVGGVIIVVTQDAKQAD--LNDSPPSRPALGNAY-ALLAALLYGCY 208

Query: 254 TVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVL 313
           +V++K    +E   V  + FFG +GLF  + LW  +  L+  G+E  F  P + +   VL
Sbjct: 209 SVMVKFHI-TEESCVSTRLFFGLVGLFDLILLWPFLIILHLYGVER-FSLPSTTAGLIVL 266

Query: 314 LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQ 373
           ++N  + + +SDY W ++++ T+PL+ T+GMSL++PLA+  D+++ G + +   I G L 
Sbjct: 267 IINASI-TFVSDYLWVIAMLMTSPLLVTVGMSLSIPLALFFDILLKGHYLNFSLILGSLL 325

Query: 374 VFAGFIIANLSDK 386
           VFAGFI+ N + +
Sbjct: 326 VFAGFIVVNYNQQ 338

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
225430527	397	PREDICTED: solute carrier family 35 memb	0.965	0.984	0.762	1e-172
296082156	396	unnamed protein product [Vitis vinifera]	0.965	0.987	0.762	1e-172
359475898	398	PREDICTED: solute carrier family 35 memb	0.965	0.982	0.755	1e-170
255548684	401	conserved hypothetical protein [Ricinus	0.962	0.972	0.742	1e-167
147864284	411	hypothetical protein VITISV_010103 [Viti	0.918	0.905	0.753	1e-161
224092633	395	predicted protein [Populus trichocarpa]	0.972	0.997	0.741	1e-161
449455681	384	PREDICTED: uncharacterized vacuolar memb	0.933	0.984	0.684	1e-149
356563991	391	PREDICTED: uncharacterized vacuolar memb	0.945	0.979	0.657	1e-143
147792538	396	hypothetical protein VITISV_001627 [Viti	0.967	0.989	0.637	1e-139
225430460	396	PREDICTED: uncharacterized vacuolar memb	0.967	0.989	0.634	1e-138

>gi|225430527|ref|XP_002285575.1| PREDICTED: solute carrier family 35 member F5-like isoform 1 [Vitis vinifera]

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 299/392 (76%), Positives = 336/392 (85%), Gaps = 1/392 (0%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           MGWKY+AGLGLIG  V IW+ SAEITQ+IF+EY+QPFALTYLGVSLMV+YLP+A+L+D  
Sbjct: 2   MGWKYKAGLGLIGTVVFIWVASAEITQRIFSEYKQPFALTYLGVSLMVVYLPIAVLKDWI 61

Query: 61  CSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWP 120
           CS LD N FKNL    ++  +S GL IPL+ NE+  S ETD  SSL  D DLSE E+GW 
Sbjct: 62  CSRLDINSFKNLCNGSTIAKSSAGLAIPLRINEICPSSETDTESSLNTDMDLSENEDGW- 120

Query: 121 LIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTST 180
           LI  + +DE  +LE+  ELSSW IAKC  YL PIWFITEY SNSALANTSVASTTVLTST
Sbjct: 121 LIITNMEDEVGLLEKNHELSSWEIAKCGFYLAPIWFITEYSSNSALANTSVASTTVLTST 180

Query: 181 SGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGD 240
           SGLFTLFFGALLGQD++ I K+VAVFISMAGVAMTTVGKTWA DE LSASESR+H+I GD
Sbjct: 181 SGLFTLFFGALLGQDTVNITKVVAVFISMAGVAMTTVGKTWAPDEMLSASESRKHSIIGD 240

Query: 241 IFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPP 300
           IFGLLSA++YGLFTVLLK+SAGSEGDK DVQKFFGYIGLFT LG WWL WPLNA GIEP 
Sbjct: 241 IFGLLSAVSYGLFTVLLKRSAGSEGDKADVQKFFGYIGLFTLLGFWWLAWPLNAVGIEPQ 300

Query: 301 FRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHG 360
           F+ PHS S+GEV+LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLT+PLAM+ADM+IHG
Sbjct: 301 FKLPHSTSIGEVVLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMIADMMIHG 360

Query: 361 RHYSAIYIFGCLQVFAGFIIANLSDKFSAKIE 392
           R YSA+YIFGC++VFAGF+IANLSDKFS K E
Sbjct: 361 RGYSAVYIFGCIEVFAGFVIANLSDKFSPKAE 392

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082156|emb|CBI21161.3| unnamed protein product [Vitis vinifera]

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 299/392 (76%), Positives = 336/392 (85%), Gaps = 1/392 (0%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           MGWKY+AGLGLIG  V IW+ SAEITQ+IF+EY+QPFALTYLGVSLMV+YLP+A+L+D  
Sbjct: 1   MGWKYKAGLGLIGTVVFIWVASAEITQRIFSEYKQPFALTYLGVSLMVVYLPIAVLKDWI 60

Query: 61  CSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWP 120
           CS LD N FKNL    ++  +S GL IPL+ NE+  S ETD  SSL  D DLSE E+GW 
Sbjct: 61  CSRLDINSFKNLCNGSTIAKSSAGLAIPLRINEICPSSETDTESSLNTDMDLSENEDGW- 119

Query: 121 LIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTST 180
           LI  + +DE  +LE+  ELSSW IAKC  YL PIWFITEY SNSALANTSVASTTVLTST
Sbjct: 120 LIITNMEDEVGLLEKNHELSSWEIAKCGFYLAPIWFITEYSSNSALANTSVASTTVLTST 179

Query: 181 SGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGD 240
           SGLFTLFFGALLGQD++ I K+VAVFISMAGVAMTTVGKTWA DE LSASESR+H+I GD
Sbjct: 180 SGLFTLFFGALLGQDTVNITKVVAVFISMAGVAMTTVGKTWAPDEMLSASESRKHSIIGD 239

Query: 241 IFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPP 300
           IFGLLSA++YGLFTVLLK+SAGSEGDK DVQKFFGYIGLFT LG WWL WPLNA GIEP 
Sbjct: 240 IFGLLSAVSYGLFTVLLKRSAGSEGDKADVQKFFGYIGLFTLLGFWWLAWPLNAVGIEPQ 299

Query: 301 FRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHG 360
           F+ PHS S+GEV+LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLT+PLAM+ADM+IHG
Sbjct: 300 FKLPHSTSIGEVVLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMIADMMIHG 359

Query: 361 RHYSAIYIFGCLQVFAGFIIANLSDKFSAKIE 392
           R YSA+YIFGC++VFAGF+IANLSDKFS K E
Sbjct: 360 RGYSAVYIFGCIEVFAGFVIANLSDKFSPKAE 391

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475898|ref|XP_003631766.1| PREDICTED: solute carrier family 35 member F5-like isoform 2 [Vitis vinifera]

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 297/393 (75%), Positives = 334/393 (84%), Gaps = 2/393 (0%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           MGWKY+AGLGLIG  V IW+ SAEITQ+IF+EY+QPFALTYLGVSLMV+YLP+A+L+D  
Sbjct: 2   MGWKYKAGLGLIGTVVFIWVASAEITQRIFSEYKQPFALTYLGVSLMVVYLPIAVLKDWI 61

Query: 61  CSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWP 120
           CS LD N FKNL    ++  +S GL IPL+ NE+  S ETD  SSL  D DLSE E+GW 
Sbjct: 62  CSRLDINSFKNLCNGSTIAKSSAGLAIPLRINEICPSSETDTESSLNTDMDLSENEDGW- 120

Query: 121 LIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTST 180
           LI  + +DE  +LE+  ELSSW IAKC  YL PIWFITEY SNSALANTSVASTTVLTST
Sbjct: 121 LIITNMEDEVGLLEKNHELSSWEIAKCGFYLAPIWFITEYSSNSALANTSVASTTVLTST 180

Query: 181 SGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSA-SESRRHNITG 239
           SGLFTLFFGALLGQD++ I K+VAVFISMAGVAMTTVGKTWA DE LS  S SR+H+I G
Sbjct: 181 SGLFTLFFGALLGQDTVNITKVVAVFISMAGVAMTTVGKTWAPDEMLSVKSGSRKHSIIG 240

Query: 240 DIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEP 299
           DIFGLLSA++YGLFTVLLK+SAGSEGDK DVQKFFGYIGLFT LG WWL WPLNA GIEP
Sbjct: 241 DIFGLLSAVSYGLFTVLLKRSAGSEGDKADVQKFFGYIGLFTLLGFWWLAWPLNAVGIEP 300

Query: 300 PFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIH 359
            F+ PHS S+GEV+LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLT+PLAM+ADM+IH
Sbjct: 301 QFKLPHSTSIGEVVLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMIADMMIH 360

Query: 360 GRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIE 392
           GR YSA+YIFGC++VFAGF+IANLSDKFS K E
Sbjct: 361 GRGYSAVYIFGCIEVFAGFVIANLSDKFSPKAE 393

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548684|ref|XP_002515398.1| conserved hypothetical protein [Ricinus communis] gi|223545342|gb|EEF46847.1| conserved hypothetical protein [Ricinus communis]

 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 300/404 (74%), Positives = 335/404 (82%), Gaps = 14/404 (3%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           MGW+YQAGLGLIG  VLIW+ SAE+TQ IF +Y+QPFALTY GVSLMV+YLP+AL++D F
Sbjct: 1   MGWRYQAGLGLIGTVVLIWVASAEVTQNIFEKYKQPFALTYFGVSLMVVYLPIALVKDWF 60

Query: 61  CSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWP 120
             L+   +FKN +   S +S  TGLDIPL+ N++  + E D+RSSL+ DKDLSEREEGWP
Sbjct: 61  FGLVRTYLFKNKY---SASSDGTGLDIPLRINDMQQAPENDMRSSLVTDKDLSEREEGWP 117

Query: 121 LIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTST 180
           +I K +++   +LE   ELSSW +AKCSLYL P+WFITEY SNSALANTSVASTTVLTST
Sbjct: 118 VIVKEEEEVSSLLEHHCELSSWEVAKCSLYLAPVWFITEYLSNSALANTSVASTTVLTST 177

Query: 181 SGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGD 240
           S LFTLFFGALLGQDSI  AKL AVFISMAGVAMTTVGKTWAADE LS SE+RRH+ITGD
Sbjct: 178 SALFTLFFGALLGQDSINAAKLAAVFISMAGVAMTTVGKTWAADEMLSISETRRHSITGD 237

Query: 241 IFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPP 300
           IFGL SAI+YGLFTVLLKK AGSEG+K DVQKFFGYIGLFT LGLWWL++PL AAGIEP 
Sbjct: 238 IFGLFSAISYGLFTVLLKKCAGSEGEKADVQKFFGYIGLFTLLGLWWLLFPLQAAGIEPQ 297

Query: 301 FRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHG 360
           F FP S  VGE +LLN FVGSVLSDYFWALSVVWTTPLVATLGMSLT+PLAMVADMVIHG
Sbjct: 298 FTFPDSTFVGEEVLLNSFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMVADMVIHG 357

Query: 361 RHYSAIYIFGCL-----------QVFAGFIIANLSDKFSAKIEL 393
           RHYSAIYI GC            QVFAGFIIAN+SDKFS K EL
Sbjct: 358 RHYSAIYILGCTQWTSINQLCWAQVFAGFIIANISDKFSMKREL 401

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147864284|emb|CAN83011.1| hypothetical protein VITISV_010103 [Vitis vinifera]

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/373 (75%), Positives = 316/373 (84%), Gaps = 1/373 (0%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           MGWKY+AGLGLIG  V IW+ SAEITQ+IF+EY+QPFALTYLGVSLMV+YLP+A+L+D  
Sbjct: 20  MGWKYKAGLGLIGTVVFIWVASAEITQRIFSEYKQPFALTYLGVSLMVVYLPIAVLKDWI 79

Query: 61  CSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWP 120
           C  LD N FK L    ++  +S GL IPL+ NE+  S ETD  SSL  D DLSE E+GW 
Sbjct: 80  CXRLDJNSFKXLCNGSTIAKSSAGLXIPLRINEICPSSETDTESSLNTDMDLSENEDGW- 138

Query: 121 LIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTST 180
           LI  + +DE   LE+  ELSSW IAKC  YL PIWFITEY SNSALANTSVASTTVLTST
Sbjct: 139 LIITNMEDEVGXLEKNHELSSWEIAKCGFYLAPIWFITEYSSNSALANTSVASTTVLTST 198

Query: 181 SGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGD 240
           SGLFTLFFGALLGQD++ I K+VAVFISMAGVAMTTVGKTWA DE LSASESR+H+I GD
Sbjct: 199 SGLFTLFFGALLGQDTVNITKVVAVFISMAGVAMTTVGKTWAPDEMLSASESRKHSIIGD 258

Query: 241 IFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPP 300
           IFGLLSA++YGLFTVLLK+SAGSEGDK DVQKFFGYIGLFT LG WWL WPLNA GIEP 
Sbjct: 259 IFGLLSAVSYGLFTVLLKRSAGSEGDKADVQKFFGYIGLFTLLGFWWLAWPLNAVGIEPQ 318

Query: 301 FRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHG 360
           F+ PHS S+GEV+LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLT+PLAM+ADM+IHG
Sbjct: 319 FKLPHSTSIGEVVLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMIADMMIHG 378

Query: 361 RHYSAIYIFGCLQ 373
           R YSA+YIFGC++
Sbjct: 379 RXYSAVYIFGCIE 391

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092633|ref|XP_002309688.1| predicted protein [Populus trichocarpa] gi|222855664|gb|EEE93211.1| predicted protein [Populus trichocarpa]

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 293/395 (74%), Positives = 340/395 (86%), Gaps = 1/395 (0%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           MGWKY+AGLGLI   V+IW+TSAE+TQ+IF  Y+QPFA+TYLGVSLMV+YLP+AL+RD F
Sbjct: 1   MGWKYKAGLGLISTVVIIWVTSAEVTQRIFEMYKQPFAITYLGVSLMVVYLPIALVRDWF 60

Query: 61  CSLLDKNIFKNLFGNRSLTSTSTGLDI-PLKSNELNNSLETDLRSSLMMDKDLSEREEGW 119
           CSL +  +  NL+   S+ +++ GL+I PL+ N++N+  E+DLR  L+ DKD+ E  EGW
Sbjct: 61  CSLFNSGLSMNLYSGNSVIASTIGLNIPPLRVNDMNDDPESDLRGCLITDKDIGEEGEGW 120

Query: 120 PLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTS 179
           PL  K  +DEP++L+Q SEL SW I KCSLYL PIWFITEY SNSALANTSVASTTVLTS
Sbjct: 121 PLNVKDKEDEPNLLQQNSELCSWEICKCSLYLAPIWFITEYLSNSALANTSVASTTVLTS 180

Query: 180 TSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITG 239
           TSGLFTL FGA+LGQ++I  AK+VAVFI+MAGVAMTTVGKTWA DE  S SE+RRH+I G
Sbjct: 181 TSGLFTLLFGAVLGQETINFAKVVAVFITMAGVAMTTVGKTWARDEASSFSETRRHSIIG 240

Query: 240 DIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEP 299
           DIFGL SAI+Y LFTVLLKK AGS+G+K+DVQK FGYIGLFT LGLWWL+WPLNAAGIEP
Sbjct: 241 DIFGLFSAISYSLFTVLLKKCAGSDGNKIDVQKCFGYIGLFTLLGLWWLLWPLNAAGIEP 300

Query: 300 PFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIH 359
            F FPHS SVGE++LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLT+PLAM+ADMVIH
Sbjct: 301 AFSFPHSWSVGEIVLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMLADMVIH 360

Query: 360 GRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIELL 394
           GR YSAIYIFGC+QVFAGFIIAN+SDKFS K ELL
Sbjct: 361 GRRYSAIYIFGCIQVFAGFIIANISDKFSVKRELL 395

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455681|ref|XP_004145580.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativus] gi|449515083|ref|XP_004164579.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativus]

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 269/393 (68%), Positives = 321/393 (81%), Gaps = 15/393 (3%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           MG KY+ GLGLI   VLIW+ SAEITQ+IF+EY+ PFAL+YLGVSLMVIYLPVA+L+D  
Sbjct: 1   MGCKYKIGLGLICTAVLIWVASAEITQRIFSEYKHPFALSYLGVSLMVIYLPVAVLKDLV 60

Query: 61  CSLLDKNIFKNLFGNR--SLTSTSTGLDIPLKSNELNNSLETDLRSSLMM-DKDLS--ER 115
           CSLL+ +   +L  N   S+ STS G+D PL+ NE++ +L+  +   L++ DKDLS  ER
Sbjct: 61  CSLLNPH---SLLDNNYDSIISTSIGIDGPLRFNEIHYNLDESMGHCLIINDKDLSTTER 117

Query: 116 EEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTT 175
           EEG PLI       P+      ++S+W I KCSLYLTP+WF TEYFSNSALANTSVA+ T
Sbjct: 118 EEGQPLI-------PNFESSHHKVSTWEIIKCSLYLTPLWFTTEYFSNSALANTSVATAT 170

Query: 176 VLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRH 235
           +L STSGLF L FGAL+GQ+SITI+K+VAVFISMAGV MTT+GKTWA +EFL  SESR  
Sbjct: 171 ILNSTSGLFALLFGALVGQESITISKVVAVFISMAGVIMTTLGKTWATNEFLIISESRGL 230

Query: 236 NITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAA 295
           +ITGDIFGLLSA  YGLFTVLLKKSAGSEGDK+DVQKFFGY+GLFT LGLWWL+WPL A 
Sbjct: 231 SITGDIFGLLSAAIYGLFTVLLKKSAGSEGDKIDVQKFFGYVGLFTVLGLWWLVWPLTAM 290

Query: 296 GIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVAD 355
           GIEPP +FP S S+ E++LLNGFVGSVLSDYFWALSV+WT+PLVATLGMSLT+PLAM+AD
Sbjct: 291 GIEPPLKFPPSTSLTEIVLLNGFVGSVLSDYFWALSVIWTSPLVATLGMSLTIPLAMLAD 350

Query: 356 MVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFS 388
           +++HGR YSA+YI GC+QVFAGF+I N SDK S
Sbjct: 351 VILHGRRYSALYILGCIQVFAGFLIVNFSDKVS 383

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563991|ref|XP_003550240.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Glycine max]

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 255/388 (65%), Positives = 305/388 (78%), Gaps = 5/388 (1%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           MGW+Y AGL LIGAFVLIW+ SAEITQ+IF EY+QPFALTY GVS+MV+YLP+++ +   
Sbjct: 1   MGWRYNAGLALIGAFVLIWVGSAEITQRIFVEYKQPFALTYFGVSVMVVYLPISVFKKWI 60

Query: 61  CSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWP 120
           CSLL K +F+N   + +L STSTGLD+P K N +    ETDL+SSL+  +++ EREEG P
Sbjct: 61  CSLL-KILFRNFHEDYTLVSTSTGLDVPFKINGVLRKPETDLKSSLITVEEIREREEGMP 119

Query: 121 LIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTST 180
           L+ K +   P +L Q    SSW IAKC LYLTPIWF  EYFSN ALANTSVASTTVL+S 
Sbjct: 120 LVKKEENKSP-LLAQSYGSSSWKIAKCGLYLTPIWFAQEYFSNMALANTSVASTTVLSSM 178

Query: 181 SGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGD 240
           SGLFTLFFGA+LGQDS+ I K+ AV ISMAGVAMTTVGKT AADE +S ++  +H+I GD
Sbjct: 179 SGLFTLFFGAILGQDSVNITKIAAVLISMAGVAMTTVGKTSAADENISMTQ--KHSIMGD 236

Query: 241 IFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPP 300
           IF LLSAI YGLFTVLLK S GS G+KVD+QK FG  GL++FLG WWL WPLN  GIEP 
Sbjct: 237 IFALLSAICYGLFTVLLKNSVGS-GEKVDMQKLFGCFGLYSFLGFWWLAWPLNVVGIEPH 295

Query: 301 FRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHG 360
           F+FP S S  E+++ N    SV+SDY WALS+VWT PLV+TLGMSLT+P+AM+ADMVIHG
Sbjct: 296 FKFPSSMSTWEIVIANSICSSVISDYLWALSIVWTAPLVSTLGMSLTIPVAMIADMVIHG 355

Query: 361 RHYSAIYIFGCLQVFAGFIIANLSDKFS 388
           R YSA+YI GC+QVFAGF +ANLS K S
Sbjct: 356 RKYSAMYILGCIQVFAGFTLANLSGKIS 383

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792538|emb|CAN72310.1| hypothetical protein VITISV_001627 [Vitis vinifera]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 253/397 (63%), Positives = 307/397 (77%), Gaps = 5/397 (1%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           M WKY+AGL LI A V+IW+TSAE+TQ IF +Y+QPFA+TYLG SLMV+YLP+A ++D  
Sbjct: 1   MSWKYRAGLFLIAAVVVIWVTSAEVTQDIFIDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60

Query: 61  CSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMM---DKDLSEREE 117
           C+ L +   K+     +L  +S GL+ PLK      + E +   +L     + D S  EE
Sbjct: 61  CNSLKRRSSKSGKNAETLNESSAGLNSPLKHIGGQKTFELEHLGTLPRKDSETDYSAYEE 120

Query: 118 GWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVL 177
           G PL++K  +D+  +L+Q   L++  IA    Y+ PIWFITEYFSN+ALA TSVASTTVL
Sbjct: 121 GRPLVSKR-RDDTDLLKQEKALTTRQIAIYGFYIAPIWFITEYFSNAALARTSVASTTVL 179

Query: 178 TSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEF-LSASESRRHN 236
           +STSGLFTLF GALLGQDS+ +AKLVAVF+SMAGVAMTT+GKTWA DE  LSAS + + +
Sbjct: 180 SSTSGLFTLFIGALLGQDSLNVAKLVAVFVSMAGVAMTTMGKTWATDESKLSASLNGKRS 239

Query: 237 ITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAG 296
           + GD+FGLLSA++YGLFTVLLKK AG EG++VDVQK FGYIGLFT + LWWL+WPL A G
Sbjct: 240 LVGDLFGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVWPLTALG 299

Query: 297 IEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADM 356
           IEP F  PHS  + EV++ NGFVGSVLSDYFWAL VVWTTPLVATLGMSLT+PLAMVADM
Sbjct: 300 IEPKFTIPHSAKMDEVVIANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADM 359

Query: 357 VIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIEL 393
           +IHGRHYSAIYI G  QVFAGF+IANLSD FS K+ L
Sbjct: 360 MIHGRHYSAIYILGSAQVFAGFVIANLSDWFSKKLGL 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430460|ref|XP_002285494.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C [Vitis vinifera] gi|296082125|emb|CBI21130.3| unnamed protein product [Vitis vinifera]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 252/397 (63%), Positives = 307/397 (77%), Gaps = 5/397 (1%)

Query: 1   MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
           M WKY+AGL LI A V+IW+TSAE+TQ IF +Y+QPFA+TYLG SLMV+YLP+A ++D  
Sbjct: 1   MSWKYRAGLFLIAAVVVIWVTSAEVTQGIFIDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60

Query: 61  CSLLDKNIFKNLFGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLMM---DKDLSEREE 117
           C+ L +   K+     +L  +S GL+ PLK      + E +   +L     + D S  EE
Sbjct: 61  CNSLKRRSSKSGKNAETLNESSAGLNSPLKHIGGQKTFELEHLGTLPRKDSETDYSAYEE 120

Query: 118 GWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVL 177
           G PL++K  +D+  +L+Q   L++  IA    Y+ PIWFITEYFSN+ALA TSVASTTVL
Sbjct: 121 GRPLVSKR-RDDTDLLKQEKALTTRQIAIYGFYIAPIWFITEYFSNAALARTSVASTTVL 179

Query: 178 TSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEF-LSASESRRHN 236
           +STSGLFTLF GALLGQDS+ +AK+VAVF+SMAGVAMTT+GKTWA DE  LSAS + + +
Sbjct: 180 SSTSGLFTLFIGALLGQDSLNVAKVVAVFVSMAGVAMTTMGKTWATDESKLSASLNGKRS 239

Query: 237 ITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAG 296
           + GD+FGLLSA++YGLFTVLLKK AG EG++VDVQK FGYIGLFT + LWWL+WPL A G
Sbjct: 240 LVGDLFGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVWPLTALG 299

Query: 297 IEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADM 356
           IEP F  PHS  + EV++ NGFVGSVLSDYFWAL VVWTTPLVATLGMSLT+PLAMVADM
Sbjct: 300 IEPKFTIPHSAKMDEVVIANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADM 359

Query: 357 VIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIEL 393
           +IHGRHYSAIYI G  QVFAGF+IANLSD FS K+ L
Sbjct: 360 MIHGRHYSAIYILGSAQVFAGFVIANLSDWFSKKLGL 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
TAIR|locus:2116657	394	AT4G32140 "AT4G32140" [Arabido	0.958	0.984	0.571	5e-115
UNIPROTKB|A6QL92	524	SLC35F5 "Solute carrier family	0.698	0.540	0.299	1.1e-38
RGD|1308125	524	Slc35f5 "solute carrier family	0.716	0.553	0.291	1.9e-38
MGI|MGI:1921400	524	Slc35f5 "solute carrier family	0.716	0.553	0.294	3.4e-38
UNIPROTKB|F1NEN4	482	SLC35F5 "Uncharacterized prote	0.730	0.614	0.280	3.5e-38
UNIPROTKB|E2RAG9	524	SLC35F5 "Uncharacterized prote	0.683	0.528	0.294	3.2e-37
UNIPROTKB|F1RY25	524	SLC35F5 "Uncharacterized prote	0.683	0.528	0.288	2.8e-36
UNIPROTKB|B8ZZY4	517	SLC35F5 "Solute carrier family	0.698	0.547	0.287	3.1e-36
UNIPROTKB|Q8WV83	523	SLC35F5 "Solute carrier family	0.698	0.541	0.287	3.6e-36
SGD|S000004480	393	YML018C "Protein of unknown fu	0.614	0.633	0.284	1.2e-35

TAIR|locus:2116657 AT4G32140 "AT4G32140" [Arabidopsis thaliana (taxid:3702)]

 Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
 Identities = 228/399 (57%), Positives = 284/399 (71%)

Query:     1 MGWKYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCF 60
             MGW+Y+AGL LIG  V+IW+TSAE+TQ IFT Y+QPFA+TYLG SLM++YLPVA L+D  
Sbjct:     1 MGWRYKAGLFLIGTVVIIWVTSAEVTQDIFTAYKQPFAVTYLGASLMIVYLPVAFLKDWL 60

Query:    61 CSLLDKNIFKNLFGNR--SLTS-TSTGLDIPLKSNELNNSLETDLRSSLMMDKDLS--ER 115
             C  LD+   K+   N+  +LT  +S  L  PL+   +   L+  +      ++ LS  E 
Sbjct:    61 CRYLDRRSSKS---NKIPALTDDSSVELGSPLRHKIIEMGLQGTITKK-DSEEHLSSHEE 116

Query:   116 EEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANXXXXXXX 175
             E+  PLI K  ++E   L+QR E+++  IA   LYL PIWF+TEY SN+ALA        
Sbjct:   117 EDERPLIGKV-REEVQTLKQRKEITTKQIAMYGLYLAPIWFVTEYLSNAALARTSVASTT 175

Query:   176 XXXXXXXXXXXXXXXXXXQDSITIAKLVAVFISMAGVAMTTVGKTWAADEF-LSASESRR 234
                               QD++ ++K+VAVF+SMAGV MTT+GKTWA+DE  L++S +  
Sbjct:   176 VLSSTSGLFTLFIGVFLGQDTLNLSKVVAVFVSMAGVVMTTLGKTWASDESQLNSSLNGE 235

Query:   235 HNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNA 294
              ++ GD+FGLLSA++YGLFTVLLKK AG EG+ VDVQK FGYIGLFT + LWWL+WPL A
Sbjct:   236 RSLMGDLFGLLSAVSYGLFTVLLKKFAGEEGEGVDVQKLFGYIGLFTLVALWWLVWPLTA 295

Query:   295 AGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVA 354
              GIEP F  PHS  V EV+L NGF+GSVLSDYFWALSVVWTTPLVATLGMSLT+PLAMVA
Sbjct:   296 LGIEPKFTIPHSVKVDEVVLANGFIGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMVA 355

Query:   355 DMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKIEL 393
             DM+IHGRHYSAIYI G  QVFAGF+IAN+SD FS K+ L
Sbjct:   356 DMMIHGRHYSAIYILGSTQVFAGFVIANISDLFSKKLGL 394

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|A6QL92 SLC35F5 "Solute carrier family 35 member F5" [Bos taurus (taxid:9913)]

 Score = 340 (124.7 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
 Identities = 93/311 (29%), Positives = 156/311 (50%)

Query:    82 STGLD---IPLKSN-ELNNSLET-DLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQR 136
             +T +D   IP KS    +N +E   L SS  ++  LS     +P +    K++  +L+  
Sbjct:   180 NTNIDTEKIPKKSRVRFSNIMEIRQLPSSHALEAKLSRMS--YPTV----KEQESLLKTV 233

Query:   137 SELSSWAIAKCSLYLTPIWFITEYFSNSALANXXXXXXXXXXXXXXXXXXXXXX---XXX 193
              +L++  +AK S +   +WF+  +    AL++                            
Sbjct:   234 GKLTATQVAKISFFFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTLILAAMFPSNS 293

Query:   194 QDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASE-SRRHNITGDIFGLLSAITYGL 252
              D  T++KL+AV +S+ GV +            LS SE S   N  G I+ L+ A+ Y +
Sbjct:   294 GDRFTLSKLLAVILSIGGVVLVN----------LSGSEKSPGRNTIGSIWSLVGAMLYAV 343

Query:   253 FTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEV 312
             + V++K+    E DK+D+  FFG++GLF  L LW   + L+  G E  F FP+ + V   
Sbjct:   344 YIVMIKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPN-KVVLMC 400

Query:   313 LLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCL 372
             +++NG +G+VLS++ W      T+ L+ TL +SLT+PL+++ADM +    +S ++  G +
Sbjct:   401 IVINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAI 460

Query:   373 QVFAGFIIANL 383
              VF  F IA L
Sbjct:   461 PVFFSFFIATL 471

GO:0016021 "integral to membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

RGD|1308125 Slc35f5 "solute carrier family 35, member F5" [Rattus norvegicus (taxid:10116)]

 Score = 338 (124.0 bits), Expect = 1.9e-38, Sum P(2) = 1.9e-38
 Identities = 92/316 (29%), Positives = 156/316 (49%)

Query:    75 NRSLTSTSTGLDIPLKSNEL--NNSLET-DLRSSLMMDKDLSEREEGWPLIAKSDKDEPH 131
             +  L ST+ G + P K + +  +N +E   L SS  ++  LS     +P +    KD+  
Sbjct:   175 SEKLESTNIGTEKPPKKSRVRFSNIMEIRQLPSSHALEAKLSRMS--YPTV----KDQES 228

Query:   132 VLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANXXXXXXXXXXXXXXXXXXXXXX- 190
             +L+   +L++  +AK S +   +WF+       AL++                       
Sbjct:   229 ILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAV 288

Query:   191 --XXXQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASE-SRRHNITGDIFGLLSA 247
                   D  T++KL+AV +S+ GV +            LS SE S   +  G I+ L  A
Sbjct:   289 FPSNSGDRFTLSKLLAVILSIGGVVLVN----------LSGSEKSAGRDTIGSIWSLAGA 338

Query:   248 ITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQ 307
             + Y ++ V++K+    E DK+D+  FFG++GLF  L LW   + L+  G E  F FP+ +
Sbjct:   339 MFYAVYIVMIKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPN-K 395

Query:   308 SVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIY 367
              V   +++NG +G+VLS++ W      T+ L+ TL +SLT+PL+++ADM +    +S ++
Sbjct:   396 VVLLCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLF 455

Query:   368 IFGCLQVFAGFIIANL 383
               G + VF  F I  L
Sbjct:   456 FAGAIPVFFSFFIVTL 471

GO:0016020 "membrane" evidence=IEA

MGI|MGI:1921400 Slc35f5 "solute carrier family 35, member F5" [Mus musculus (taxid:10090)]

 Score = 336 (123.3 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
 Identities = 93/316 (29%), Positives = 155/316 (49%)

Query:    75 NRSLTSTSTGLD-IPLKSN-ELNNSLET-DLRSSLMMDKDLSEREEGWPLIAKSDKDEPH 131
             +  L ST+ G +  P KS    +N +E   L SS  ++  LS     +P +    KD+  
Sbjct:   175 SEKLESTNIGTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMS--YPTV----KDQES 228

Query:   132 VLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANXXXXXXXXXXXXXXXXXXXXXX- 190
             +L+   +L++  +AK S +   +WF+       AL++                       
Sbjct:   229 ILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAV 288

Query:   191 --XXXQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASE-SRRHNITGDIFGLLSA 247
                   D  T++KL+AV +S+ GV +            LS SE S   +  G I+ L  A
Sbjct:   289 FPSNSGDRFTLSKLLAVILSIGGVVLVN----------LSGSEKSAGRDTIGSIWSLAGA 338

Query:   248 ITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQ 307
             + Y ++ V++K+    E DK+D+  FFG++GLF  L LW   + L+  G E  F FP+ +
Sbjct:   339 MFYAVYIVMIKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPN-K 395

Query:   308 SVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIY 367
              V   +++NG +G+VLS++ W      T+ L+ TL +SLT+PL+++ADM +    +S ++
Sbjct:   396 VVLLCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLF 455

Query:   368 IFGCLQVFAGFIIANL 383
               G + VF  F I  L
Sbjct:   456 FAGAIPVFFSFFIVTL 471

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NEN4 SLC35F5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 331 (121.6 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 90/321 (28%), Positives = 158/321 (49%)

Query:    69 FKNLFGNRSLTSTSTGLDIPLKSN-ELNNSLET-DLRSSLMMDKDLSEREEGWPLIAKSD 126
             F +L   +S ++ +     P K     +N +E   L SS  ++  LS     +P +    
Sbjct:   126 FHDLPTEKSGSNNNDTEKTPKKPRVRFSNIMEIRQLPSSHALEAKLSRMS--YPAV---- 179

Query:   127 KDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANXXXXXXXXXXXXXXXXXX 186
             K++  +L+   +L++  +AK S +   +WF+  +    AL++                  
Sbjct:   180 KEQESILKTVGKLTATQVAKISFFFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTL 239

Query:   187 XXXX---XXXQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASE-SRRHNITGDIF 242
                        D  T++KL+AVF+S+ GV +            LS SE S   +  G ++
Sbjct:   240 ILAAVFPSNSGDRFTLSKLLAVFLSIGGVVLVN----------LSGSEKSPGRDTIGSLW 289

Query:   243 GLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFR 302
              L+ A+ Y ++ V++K+    E DK+D+  FFG++GLF  L LW   + L+  G E  F 
Sbjct:   290 SLVGAMLYAVYIVMIKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEA-FE 347

Query:   303 FPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRH 362
             FP S+ +   +++NG +G+VLS++ W      T+ L+ TL +SLT+PL+++ADM +    
Sbjct:   348 FP-SKLIWMCIVINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQ 406

Query:   363 YSAIYIFGCLQVFAGFIIANL 383
             +S ++  G + VF  F I  L
Sbjct:   407 FSWLFFAGAVPVFFSFFIVTL 427

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|E2RAG9 SLC35F5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 328 (120.5 bits), Expect = 3.2e-37, Sum P(2) = 3.2e-37
 Identities = 89/302 (29%), Positives = 150/302 (49%)

Query:    88 PLKSN-ELNNSLET-DLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIA 145
             P KS    +N +E   L SS  ++  LS     +P +    K++  +L+   +L++  +A
Sbjct:   189 PKKSRVRFSNIMEIRQLPSSHALEAKLSRMS--YPTV----KEQESLLKTVGKLTTTQVA 242

Query:   146 KCSLYLTPIWFITEYFSNSALANXXXXXXXXXXXXXXXXXXXXXX---XXXQDSITIAKL 202
             K S +   +WF+       AL++                             D  T++KL
Sbjct:   243 KISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKL 302

Query:   203 VAVFISMAGVAMTTVGKTWAADEFLSASE-SRRHNITGDIFGLLSAITYGLFTVLLKKSA 261
             +AV +S+ GV +            LS SE S   +  G I+ L+ A+ Y ++ V++K+  
Sbjct:   303 LAVILSIGGVVLVN----------LSGSEKSAGRDTIGSIWSLVGAMLYAVYIVMIKRKV 352

Query:   262 GSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGS 321
               E DK+D+  FFG++GLF  L LW   + L+  G E  F FP+ + V   +++NG +G+
Sbjct:   353 DRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPN-KVVLMCIIINGLIGT 409

Query:   322 VLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIA 381
             VLS++ W      T+ L+ TL +SLT+PL+++ADM +    +S ++  G + VF  F IA
Sbjct:   410 VLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIA 469

Query:   382 NL 383
              L
Sbjct:   470 TL 471

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1RY25 SLC35F5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 320 (117.7 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
 Identities = 87/302 (28%), Positives = 148/302 (49%)

Query:    88 PLKSN-ELNNSLET-DLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIA 145
             P KS    +N +E   L SS  ++  LS     +P +    K++  + +   +L++  +A
Sbjct:   189 PKKSRVRFSNIMEIRQLPSSHALEAKLSRMS--YPTV----KEQESLFKTVGKLTATQVA 242

Query:   146 KCSLYLTPIWFITEYFSNSALANXXXXXXXXXXXXXXXXXXXXXX---XXXQDSITIAKL 202
             K S +   +WF+       AL++                             D  T++KL
Sbjct:   243 KISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKL 302

Query:   203 VAVFISMAGVAMTTVGKTWAADEFLSASE-SRRHNITGDIFGLLSAITYGLFTVLLKKSA 261
             +AV +S+ GV +            LS SE S   +  G I+ L+ A+ Y ++ V++K+  
Sbjct:   303 LAVILSIGGVVLVN----------LSGSEKSAGRDTIGSIWSLVGAMLYAVYIVMIKRKV 352

Query:   262 GSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGS 321
               E DK+D+  FFG++GLF  L LW   + L+  G E  F FP+ + V   +++NG +G+
Sbjct:   353 DRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPN-KVVLMCIIVNGLIGT 409

Query:   322 VLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIA 381
             VLS++ W      T+ L+ TL +SLT+PL+++ADM +    +S ++  G + VF  F I 
Sbjct:   410 VLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIHVFFSFFIV 469

Query:   382 NL 383
              L
Sbjct:   470 TL 471

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|B8ZZY4 SLC35F5 "Solute carrier family 35 member F5" [Homo sapiens (taxid:9606)]

 Score = 319 (117.4 bits), Expect = 3.1e-36, Sum P(2) = 3.1e-36
 Identities = 89/310 (28%), Positives = 152/310 (49%)

Query:    82 STGLDI---PLKSN-ELNNSLET-DLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQR 136
             ST +D    P KS    +N +E   L SS  ++  LS     +P+     K++  +L+  
Sbjct:   174 STNIDTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMS--YPV-----KEQESILKTV 226

Query:   137 SELSSWAIAKCSLYLTPIWFITEYFSNSALANXXXXXXXXXXXXXXXXXXXXXX---XXX 193
              +L++  +AK S +   +WF+       AL++                            
Sbjct:   227 GKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNS 286

Query:   194 QDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLF 253
              D  T++KL+AV +S+ GV +  +    A  E      + R  + G I+ L  A+ Y ++
Sbjct:   287 GDRFTLSKLLAVILSIGGVVLVNL----AGSE----KPAGRDTV-GSIWSLAGAMLYAVY 337

Query:   254 TVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVL 313
              V++K+    E DK+D+  FFG++GLF  L LW   + L+  G E  F FP+ + V   +
Sbjct:   338 IVMIKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPN-KVVLMCI 394

Query:   314 LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQ 373
             ++NG +G+VLS++ W      T+ L+ TL +SLT+PL+++ADM +    +S ++  G + 
Sbjct:   395 IINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIP 454

Query:   374 VFAGFIIANL 383
             VF  F I  L
Sbjct:   455 VFFSFFIVTL 464

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q8WV83 SLC35F5 "Solute carrier family 35 member F5" [Homo sapiens (taxid:9606)]

 Score = 319 (117.4 bits), Expect = 3.6e-36, Sum P(2) = 3.6e-36
 Identities = 89/310 (28%), Positives = 152/310 (49%)

Query:    82 STGLDI---PLKSN-ELNNSLET-DLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQR 136
             ST +D    P KS    +N +E   L SS  ++  LS     +P+     K++  +L+  
Sbjct:   180 STNIDTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMS--YPV-----KEQESILKTV 232

Query:   137 SELSSWAIAKCSLYLTPIWFITEYFSNSALANXXXXXXXXXXXXXXXXXXXXXX---XXX 193
              +L++  +AK S +   +WF+       AL++                            
Sbjct:   233 GKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNS 292

Query:   194 QDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLF 253
              D  T++KL+AV +S+ GV +  +    A  E      + R  + G I+ L  A+ Y ++
Sbjct:   293 GDRFTLSKLLAVILSIGGVVLVNL----AGSE----KPAGRDTV-GSIWSLAGAMLYAVY 343

Query:   254 TVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVL 313
              V++K+    E DK+D+  FFG++GLF  L LW   + L+  G E  F FP+ + V   +
Sbjct:   344 IVMIKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPN-KVVLMCI 400

Query:   314 LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQ 373
             ++NG +G+VLS++ W      T+ L+ TL +SLT+PL+++ADM +    +S ++  G + 
Sbjct:   401 IINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIP 460

Query:   374 VFAGFIIANL 383
             VF  F I  L
Sbjct:   461 VFFSFFIVTL 470

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

SGD|S000004480 YML018C "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 311 (114.5 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
 Identities = 73/257 (28%), Positives = 127/257 (49%)

Query:   135 QRSELSSWAIAKCSLYLTPIWFITEYFSNSALANXXXXXXXXXXXXXXXXXXXXXXXXXQ 194
             Q+  L+ +   K S     +WF     +N++LA                           
Sbjct:   117 QKKRLTLYETIKLSAEFCILWFTANLVTNASLAFTSVASQTILSTTSSFFTLFIGAICHV 176

Query:   195 DSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHN-----ITGDIFGLLSAIT 249
             +S++ +K++  FIS  G+ M T   +    +   A  S   N     + G++  L  A+ 
Sbjct:   177 ESLSKSKVLGSFISFVGIIMVTKSDSHQRYQRHIADVSGDDNDAVQVLIGNLLALAGAVL 236

Query:   250 YGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSV 309
             YG+++ LLK+  G E  +V+++ FFG++GLF  L LW  +  L+  G EP F  P    V
Sbjct:   237 YGVYSTLLKREVGDE-TRVNMKIFFGFVGLFNLLFLWPSLIVLDFFGWEP-FSLPKDPKV 294

Query:   310 GEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIF 369
               ++ +N  + + +SD+ WA +++ T+PL  T+G+S+T+PLAM  D++   +  SA+Y+F
Sbjct:   295 VVIIFVNCLI-TFVSDFCWAKAMLLTSPLTVTVGLSITIPLAMFGDVIFKHKTMSALYLF 353

Query:   370 GCLQVFAGFIIANLSDK 386
             G   +   F I N S +
Sbjct:   354 GATLILGSFFIINKSSE 370

GO:0000329 "fungal-type vacuole membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IEA

GO:0005773 "vacuole" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q03730	YMB8_YEAST	No assigned EC number	0.3045	0.8592	0.8854	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	405
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	3e-08

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 54.5 bits (131), Expect = 3e-08
 Identities = 41/228 (17%), Positives = 86/228 (37%), Gaps = 23/228 (10%)

Query: 160 YFSNSALANTSVASTTVLTSTSGLFTLFFGA-LLGQDSITIAKLVAVFISMAGVAMTTVG 218
                AL  TS +  +++     LFT      LL  + +++ +++ + +++AGV +    
Sbjct: 85  LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLI--- 141

Query: 219 KTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIG 278
                   L        ++ G +  L +A+ + L+T L+K+ +     ++        + 
Sbjct: 142 -------LLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-----RLGPVTLALLLQ 189

Query: 279 LFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPL 338
           L   L L  L +          F  P       +LL  G   + L+   W  ++      
Sbjct: 190 LLLALLLLLLFFL-------SGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGAS 242

Query: 339 VATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK 386
           +  L   L    A +  +++ G   S   + G   V  G ++A+L  +
Sbjct: 243 LVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	405
KOG2765	416	consensus Predicted membrane protein [Function unk	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.95
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.95
PRK11689	295	aromatic amino acid exporter; Provisional	99.95
PRK15430	296	putative chloramphenical resistance permease RarD;	99.94
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.94
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.94
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.93
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.91
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.9
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.89
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.89
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.88
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.85
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.78
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.78
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.71
COG2962	293	RarD Predicted permeases [General function predict	99.65
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.65
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.61
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.6
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.59
KOG2766	336	consensus Predicted membrane protein [Function unk	99.49
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.36
KOG1580	337	consensus UDP-galactose transporter related protei	99.21
COG2510	140	Predicted membrane protein [Function unknown]	99.16
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.11
KOG1581	327	consensus UDP-galactose transporter related protei	99.08
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.06
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.05
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.02
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.96
PRK13499	345	rhamnose-proton symporter; Provisional	98.94
COG2510	140	Predicted membrane protein [Function unknown]	98.91
KOG1582	367	consensus UDP-galactose transporter related protei	98.9
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.86
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.83
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.77
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.68
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.64
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.63
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.62
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.6
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.55
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.5
PLN00411	358	nodulin MtN21 family protein; Provisional	98.46
PRK15430	296	putative chloramphenical resistance permease RarD;	98.43
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.37
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.34
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.28
PRK11689	295	aromatic amino acid exporter; Provisional	98.26
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.22
PRK11272	292	putative DMT superfamily transporter inner membran	98.18
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.15
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.08
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.97
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.91
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.83
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.79
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.79
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.72
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.71
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.67
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.65
COG2962	293	RarD Predicted permeases [General function predict	97.63
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.6
COG2076	106	EmrE Membrane transporters of cations and cationic	97.56
PRK11431	105	multidrug efflux system protein; Provisional	97.49
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.38
PRK13499	345	rhamnose-proton symporter; Provisional	97.29
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.15
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.07
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.06
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.02
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.95
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.92
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.9
COG2076	106	EmrE Membrane transporters of cations and cationic	96.84
PRK11431	105	multidrug efflux system protein; Provisional	96.84
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	96.83
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.47
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.37
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.28
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.24
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.22
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.7
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.2
KOG4510	346	consensus Permease of the drug/metabolite transpor	94.88
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	94.65
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.42
KOG2765	416	consensus Predicted membrane protein [Function unk	94.12
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	93.55
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	93.3
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	93.07
KOG2922	335	consensus Uncharacterized conserved protein [Funct	91.32
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	89.78
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	89.55
KOG1580	337	consensus UDP-galactose transporter related protei	85.17
KOG1443	349	consensus Predicted integral membrane protein [Fun	83.81
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	82.93
PRK02237	109	hypothetical protein; Provisional	81.62

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.9e-53  Score=394.53  Aligned_cols=375  Identities=40%  Similarity=0.686  Sum_probs=289.7

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcEeeheecchhhHHHHHHHHHH--HHHHhhhhhhhcccc----
Q 015504            1 MGWKYQAGLGLIGAFVLIWITSAEITQKIFTE--YRQPFALTYLGVSLMVIYLPVALLR--DCFCSLLDKNIFKNL----   72 (405)
Q Consensus         1 ~~~~~~~g~~~~l~~~i~w~~~~~l~q~i~~~--~~~P~~~t~~~~~~~~l~lp~~~~~--~~~~~~~~~~~~~~~----   72 (405)
                      +.|||.+|++++++|.++|+++++++|+++++  |+|||++||++++.+++|+|.+.+.  +|+....|+++.+..    
T Consensus         8 ~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e   87 (416)
T KOG2765|consen    8 KRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEE   87 (416)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhh
Confidence            35899999999999999999999999999987  6799999999999999999865432  344333221111110    


Q ss_pred             cCCCcccCCCCCCCCcccccccccchhhhhhcccc---cCcCcCccccCCccccc---CCC---CCcchhhcccCCCHHH
Q 015504           73 FGNRSLTSTSTGLDIPLKSNELNNSLETDLRSSLM---MDKDLSEREEGWPLIAK---SDK---DEPHVLEQRSELSSWA  143 (405)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~  143 (405)
                      .+++.+.++.++      .    +.-|.++.....   ..++.+.+||+.+-...   .++   ..+..++.+.+++.++
T Consensus        88 ~d~e~y~~~~~~------~----~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~  157 (416)
T KOG2765|consen   88 ADAEGYFSACTT------D----KTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQ  157 (416)
T ss_pred             hhhhcccccccc------c----cccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHH
Confidence            011111111000      0    000001000000   00111111111000000   000   0011133445678889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCcc
Q 015504          144 IAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAA  223 (405)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~  223 (405)
                      ..+.++.++++||++|++++.||.+|+++..+++++++.+||.+++.++..||+|+.|++++++++.|++++..+|....
T Consensus       158 ~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~  237 (416)
T KOG2765|consen  158 TAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN  237 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998876433


Q ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccC
Q 015504          224 DEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRF  303 (405)
Q Consensus       224 ~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  303 (405)
                      ++     ...+....|+++++++|+.||+|.++.||..++++.++++++++|++|+++++++||.++++++++.|+ |++
T Consensus       238 ~~-----~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~-F~l  311 (416)
T KOG2765|consen  238 SD-----LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER-FEL  311 (416)
T ss_pred             cc-----CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc-ccC
Confidence            22     234567899999999999999999999999987667999999999999999999999999999998885 999


Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhc
Q 015504          304 PHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL  383 (405)
Q Consensus       304 ~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~  383 (405)
                      |.... ...++..+++++++++++|.+|+-+++|..+++++++++|+|++.|.++.|.++++.+++|.+.|++|++++++
T Consensus       312 P~~~q-~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~  390 (416)
T KOG2765|consen  312 PSSTQ-FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI  390 (416)
T ss_pred             CCCce-eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence            98764 44677788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhhHH
Q 015504          384 SDKFSAKIE  392 (405)
Q Consensus       384 ~~~~~~~~~  392 (405)
                      ..+..++++
T Consensus       391 ~~~~~~~~~  399 (416)
T KOG2765|consen  391 SSENSKKDP  399 (416)
T ss_pred             ccccccccc
Confidence            876555444

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=2.3e-28  Score=237.79  Aligned_cols=305  Identities=10%  Similarity=0.049  Sum_probs=214.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeeheecchhhHHHH-HHHHHHHHHHhhhhhhhcccccCCCcccCCCC
Q 015504            5 YQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYL-PVALLRDCFCSLLDKNIFKNLFGNRSLTSTST   83 (405)
Q Consensus         5 ~~~g~~~~l~~~i~w~~~~~l~q~i~~~~~~P~~~t~~~~~~~~l~l-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (405)
                      ...-.+.++++.+.+++...+.|..++++-.|+.+.++|+....+++ |+.+.+        +|+++             
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~--------~~~~~-------------   69 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT--------NRSRS-------------   69 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHH--------HHhcc-------------
Confidence            45577889999999999999999999999999999999988877665 543321        11100             


Q ss_pred             CCCCcccccccccchhhhhhcccccCcCcCccccCCcccccCCCCCcchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 015504           84 GLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSN  163 (405)
Q Consensus        84 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (405)
                                                                          .++.+++++....+.+.+. ++.+.+++
T Consensus        70 ----------------------------------------------------~~~~~~~~~~~l~l~g~~g-~~~~~~~~   96 (358)
T PLN00411         70 ----------------------------------------------------LPPLSVSILSKIGLLGFLG-SMYVITGY   96 (358)
T ss_pred             ----------------------------------------------------cCcchHHHHHHHHHHHHHH-HHHHHHHH
Confidence                                                                0011233444444444333 34556789


Q ss_pred             HHhhccchhhHHHHhhhhHHHHHHHHHHh------ccccchHHHHHHHHHhhhceEEEEecCCCcc-cc---------cc
Q 015504          164 SALANTSVASTTVLTSTSGLFTLFFGALL------GQDSITIAKLVAVFISMAGVAMTTVGKTWAA-DE---------FL  227 (405)
Q Consensus       164 ~al~~~s~~~~~~l~~~~pv~~~ils~l~------~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~-~~---------~~  227 (405)
                      .|++|+++++++++.+++|++++++++++      ++||+++++++|++++++|+.++...++... ..         ..
T Consensus        97 ~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~  176 (358)
T PLN00411         97 IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQL  176 (358)
T ss_pred             HHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccc
Confidence            99999999999999999999999999999      6999999999999999999998775432110 00         00


Q ss_pred             c--cccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCC
Q 015504          228 S--ASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPH  305 (405)
Q Consensus       228 ~--~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~  305 (405)
                      .  ......+...|++++++++++||+|.++.|+..+++++..........++  +.....+.. ...-..... +....
T Consensus       177 ~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~--~~~~~~~~l-~~~~~~~~~-~~~~~  252 (358)
T PLN00411        177 SPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCV--SIVTSMIGL-VVEKNNPSV-WIIHF  252 (358)
T ss_pred             ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHH--HHHHHHHHH-HHccCCccc-ceecc
Confidence            0  00111234679999999999999999999998776544322221111111  111111111 100000110 11122


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCc
Q 015504          306 SQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       306 ~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      +.. ...++|.+++ +.++|.+|++++++.+|.+++++.+++|+++++++++++||++++.+++|+++|++|+++.++++
T Consensus       253 ~~~-~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        253 DIT-LITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             chH-HHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            222 3457777765 67899999999999999999999999999999999999999999999999999999999998765


Q ss_pred             hhhh
Q 015504          386 KFSA  389 (405)
Q Consensus       386 ~~~~  389 (405)
                      +++.
T Consensus       331 ~~~~  334 (358)
T PLN00411        331 ANEE  334 (358)
T ss_pred             hhhh
Confidence            4433

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=5.8e-28  Score=230.37  Aligned_cols=226  Identities=23%  Similarity=0.330  Sum_probs=191.0

Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccc
Q 015504          151 LTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSAS  230 (405)
Q Consensus       151 ~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~  230 (405)
                      .+++++.+|++...|++||+.+.++++.+++.+++++++++++|+|+++.+++|++++++|+.++...|..+.+++    
T Consensus        85 la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~----  160 (334)
T PF06027_consen   85 LALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDS----  160 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccC----
Confidence            4678999999999999999999999999999999999999999999999999999999999999998876433222    


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHH
Q 015504          231 ESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVG  310 (405)
Q Consensus       231 ~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  310 (405)
                      ...++...||+++++||++||+++++.|+..++.    +...++++.|+++.++.++....++..++|+ .+++  ...+
T Consensus       161 ~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~----~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~-~~w~--~~~~  233 (334)
T PF06027_consen  161 SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA----PRVEFLGMLGLFGFIISGIQLAILERSGIES-IHWT--SQVI  233 (334)
T ss_pred             CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC----CHHHHHHHHHHHHHHHHHHHHHheehhhhhc-cCCC--hhhH
Confidence            2345689999999999999999999999998742    3456788889999998888777777777664 4443  3333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchhh
Q 015504          311 EVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFS  388 (405)
Q Consensus       311 ~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~~  388 (405)
                      ..++.. .++..+.|.+....+++++|+...+.+..+.|.++++|++++|+++++..++|.++|++|+++++..++..
T Consensus       234 ~~~v~~-~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  234 GLLVGY-ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            333322 33567788899999999999999999999999999999999999999999999999999999999876533

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.95  E-value=5.2e-26  Score=217.07  Aligned_cols=285  Identities=16%  Similarity=0.099  Sum_probs=208.0

Q ss_pred             CchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCcEeeheecchhhHHHH-HHHHHHHHHHhhhhhhhcccccCCCcc
Q 015504            1 MGWKYQAGLG-LIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYL-PVALLRDCFCSLLDKNIFKNLFGNRSL   78 (405)
Q Consensus         1 ~~~~~~~g~~-~~l~~~i~w~~~~~l~q~i~~~~~~P~~~t~~~~~~~~l~l-p~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (405)
                      |+.|..+.++ .++++.++|+.+...+|...+ .-.|+.++..|.....+.+ |+...         ++++         
T Consensus         1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~---------~~~~---------   61 (292)
T PRK11272          1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLL---------RGHP---------   61 (292)
T ss_pred             CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHH---------hCCC---------
Confidence            4556555554 588899999999999998777 6789999998988766554 43211         1100         


Q ss_pred             cCCCCCCCCcccccccccchhhhhhcccccCcCcCccccCCcccccCCCCCcchhhcccCCCHHHHHHHHHHHHHHHHHH
Q 015504           79 TSTSTGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFIT  158 (405)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (405)
                                                                                 ..++++.......+.+.+...
T Consensus        62 -----------------------------------------------------------~~~~~~~~~~~~~g~~~~~~~   82 (292)
T PRK11272         62 -----------------------------------------------------------LPTLRQWLNAALIGLLLLAVG   82 (292)
T ss_pred             -----------------------------------------------------------CCcHHHHHHHHHHHHHHHHHH
Confidence                                                                       001122222333333334456


Q ss_pred             HHHHHHHh-hccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccccccccch
Q 015504          159 EYFSNSAL-ANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNI  237 (405)
Q Consensus       159 ~~~~~~al-~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~  237 (405)
                      +.+++.+. ++++++.++++.++.|+++++++++ +|||+++++++|++++++|++++..++.            .+...
T Consensus        83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~------------~~~~~  149 (292)
T PRK11272         83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN------------LSGNP  149 (292)
T ss_pred             HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc------------cccch
Confidence            67778898 9999999999999999999999986 6999999999999999999998864321            01245


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHH
Q 015504          238 TGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNG  317 (405)
Q Consensus       238 ~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g  317 (405)
                      .|++++++++++||.|.+..||..+++ +.......+    .++...+.+...   ..+ + ......+...|..+++.+
T Consensus       150 ~G~l~~l~a~~~~a~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~---~~~-~-~~~~~~~~~~~~~i~~l~  219 (292)
T PRK11272        150 WGAILILIASASWAFGSVWSSRLPLPV-GMMAGAAEM----LAAGVVLLIASL---LSG-E-RLTALPTLSGFLALGYLA  219 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCc-chHHHHHHH----HHHHHHHHHHHH---HcC-C-cccccCCHHHHHHHHHHH
Confidence            799999999999999999999976532 211111111    122222222111   111 1 122222345688899999


Q ss_pred             HHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          318 FVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       318 ~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      ++++++++.+|++++++.++..+++..+++|+++++++++++||+++..+++|+++|+.|+++.++.++
T Consensus       220 i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        220 VFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999999876433

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.95  E-value=5.3e-26  Score=217.74  Aligned_cols=215  Identities=11%  Similarity=0.135  Sum_probs=163.7

Q ss_pred             HHHHHHHHhhc-cchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccccccccc
Q 015504          158 TEYFSNSALAN-TSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHN  236 (405)
Q Consensus       158 ~~~~~~~al~~-~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~  236 (405)
                      ...+++.+++| .+++.++++.+++|+++.+++++++|||+++++++|++++++|+.++..++..          .....
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~----------~~~~~  141 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLN----------GQHVA  141 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCC----------Ccchh
Confidence            34466788888 58899999999999999999999999999999999999999999998854321          11123


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc--c-CCCchhHHHHH
Q 015504          237 ITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPF--R-FPHSQSVGEVL  313 (405)
Q Consensus       237 ~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--~-~~~~~~~~~~i  313 (405)
                      ..|++++++++++||.|.++.||..++++........ .+..+...+   |........+.+...  . .+.+...|..+
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  217 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLV-VWSALIPII---PFFVASLILDGSATMIHSLVTIDMTTILSL  217 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHH-HHHHHHHHH---HHHHHHHHhcCchhhhhhhccCCHHHHHHH
Confidence            5799999999999999999999986543322211111 111222211   111111111100000  0 12234578889


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          314 LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       314 l~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      +|.++++++++|.+|++++++.++.++++..+++|+++++++++++||+++..+++|+++|+.|+++..++.+
T Consensus       218 ~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        218 MYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999888665

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.95  E-value=2.1e-25  Score=213.16  Aligned_cols=216  Identities=15%  Similarity=0.158  Sum_probs=160.4

Q ss_pred             HHHHHHHHHHHhh----ccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccc
Q 015504          155 WFITEYFSNSALA----NTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSAS  230 (405)
Q Consensus       155 ~~~~~~~~~~al~----~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~  230 (405)
                      ....+.+++.|++    .+++++++++.+++|+++.+++++++|||+++++++|++++++|++++..++......+.  .
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~--~  148 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAEL--I  148 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhh--h
Confidence            3344555566665    467888999999999999999999999999999999999999999999865421100000  0


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHH
Q 015504          231 ESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVG  310 (405)
Q Consensus       231 ~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  310 (405)
                      .+......|++++++++++||+|.++.||..++.++ ..  ..+...+    +.+++.   ....+ +  ...+.+...|
T Consensus       149 ~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~-~~--~~~~~~~----~~l~~~---~~~~~-~--~~~~~~~~~~  215 (295)
T PRK11689        149 NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNG-IT--LFFILTA----LALWIK---YFLSP-Q--PAMVFSLPAI  215 (295)
T ss_pred             hccccChHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hh--HHHHHHH----HHHHHH---HHHhc-C--ccccCCHHHH
Confidence            011124579999999999999999999998764332 22  1111111    111111   11111 1  1122334567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          311 EVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       311 ~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      ..+++.++ +++++|.+|++++++.+|+++++..+++|+++++++++++||+++..+++|+++|+.|+++....++
T Consensus       216 ~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        216 IKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            77778785 6899999999999999999999999999999999999999999999999999999999999876544

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.94  E-value=4.7e-25  Score=210.87  Aligned_cols=287  Identities=10%  Similarity=0.056  Sum_probs=201.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeeheecchhhHHHH-HHHHHHHHHHhhhhhhhcccccCCCcccCCC
Q 015504            4 KYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYL-PVALLRDCFCSLLDKNIFKNLFGNRSLTSTS   82 (405)
Q Consensus         4 ~~~~g~~~~l~~~i~w~~~~~l~q~i~~~~~~P~~~t~~~~~~~~l~l-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (405)
                      ++.+|.+++++..++|+.....+|.. .+ -.|..+++.|.....+++ ++...+       ++++..            
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~-------~~~~~~------------   63 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSIC-------RQWSYL------------   63 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHH-------ccHHHH------------
Confidence            56689999999999999999999875 33 568999999887766544 332211       000000            


Q ss_pred             CCCCCcccccccccchhhhhhcccccCcCcCccccCCcccccCCCCCcchhhcccCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015504           83 TGLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFS  162 (405)
Q Consensus        83 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (405)
                                                                         +++ ..++++. ...+.+++..+..+.++
T Consensus        64 ---------------------------------------------------~~~-~~~~~~~-~~~~~~~~~~~~~~~~~   90 (296)
T PRK15430         64 ---------------------------------------------------KTL-IQTPQKI-FMLAVSAVLIGGNWLLF   90 (296)
T ss_pred             ---------------------------------------------------HHH-HcCHHHH-HHHHHHHHHHHHHHHHH
Confidence                                                               000 0012222 22334455666788999


Q ss_pred             HHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccccccccchhhHHH
Q 015504          163 NSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIF  242 (405)
Q Consensus       163 ~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~G~~l  242 (405)
                      ++|++++++++++++.+++|+++.+++++++|||+++++++|++++++|++++..+++           +  .    ..+
T Consensus        91 ~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-----------~--~----~~~  153 (296)
T PRK15430         91 IWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-----------S--L----PII  153 (296)
T ss_pred             HHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-----------C--c----cHH
Confidence            9999999999999999999999999999999999999999999999999999864321           0  0    256


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhH-HHHHHHHHHHHH
Q 015504          243 GLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSV-GEVLLLNGFVGS  321 (405)
Q Consensus       243 ~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~il~~g~~~t  321 (405)
                      +++++++||+|.++.|+...+ + .........+...++....    .+....+.   .....++.. +..+++.|+ .+
T Consensus       154 ~l~aa~~~a~~~i~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~g~-~t  223 (296)
T PRK15430        154 ALGLAFSFAFYGLVRKKIAVE-A-QTGMLIETMWLLPVAAIYL----FAIADSST---SHMGQNPMSLNLLLIAAGI-VT  223 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCCC-C-chhHHHHHHHHHHHHHHHH----HHHccCCc---ccccCCcHHHHHHHHHHHH-HH
Confidence            888999999999999987542 1 1111111111111111111    01111011   111112222 333444454 58


Q ss_pred             HHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchhhhhH
Q 015504          322 VLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKI  391 (405)
Q Consensus       322 ~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~~~~~  391 (405)
                      .+++.+|+++.++.+|..+++..+++|+++++++++++||+++..+++|+++|+.|+.+...+..+..|+
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~~~~  293 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRR  293 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            8999999999999999999999999999999999999999999999999999999998888776655443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.94  E-value=1e-24  Score=208.20  Aligned_cols=277  Identities=13%  Similarity=0.050  Sum_probs=199.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeeheecchhhHHHHHHHHHHHHHHhhhhhhhcccccCCCcccCCCC
Q 015504            4 KYQAGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLFGNRSLTSTST   83 (405)
Q Consensus         4 ~~~~g~~~~l~~~i~w~~~~~l~q~i~~~~~~P~~~t~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (405)
                      .+.+|.+++++..+.|+.+...+|+..++ -.|+.+.+.|.....+.+.+.. +       +++.+.             
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~-~-------~~~~~~-------------   66 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIF-K-------PWRLRF-------------   66 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHH-h-------HHhccC-------------
Confidence            35679999999999999999999999987 6777788888777665542211 1       111000             


Q ss_pred             CCCCcccccccccchhhhhhcccccCcCcCccccCCcccccCCCCCcchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 015504           84 GLDIPLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSN  163 (405)
Q Consensus        84 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (405)
                                                                           ++..++..+..+    .+....+.+++
T Consensus        67 -----------------------------------------------------~~~~~~~~~~~g----~~~~~~~~~~~   89 (293)
T PRK10532         67 -----------------------------------------------------AKEQRLPLLFYG----VSLGGMNYLFY   89 (293)
T ss_pred             -----------------------------------------------------CHHHHHHHHHHH----HHHHHHHHHHH
Confidence                                                                 001122223333    23455677889


Q ss_pred             HHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccccccccchhhHHHH
Q 015504          164 SALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFG  243 (405)
Q Consensus       164 ~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~G~~l~  243 (405)
                      +|+++++++.++.+.+++|+++.+++.    ||+.+  ..++.++++|++++..++..          .......|++++
T Consensus        90 ~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~----------~~~~~~~G~ll~  153 (293)
T PRK10532         90 LSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQD----------VSHVDLTGAALA  153 (293)
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCC----------cccCChHHHHHH
Confidence            999999999999999999999998873    55554  45567789999988754321          112245799999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHHHHHHHH
Q 015504          244 LLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVL  323 (405)
Q Consensus       244 l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g~~~t~l  323 (405)
                      ++++++||.|.++.||..++.++ ....    +..+++.+.+.|...   ..+.    ..+.+...|..+++.|++++++
T Consensus       154 l~aa~~~a~~~v~~r~~~~~~~~-~~~~----~~~~~~~~~l~~~~~---~~~~----~~~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        154 LGAGACWAIYILSGQRAGAEHGP-ATVA----IGSLIAALIFVPIGA---LQAG----EALWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCc-hHHH----HHHHHHHHHHHHHHH---HccC----cccCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999998764332 2221    122233333333211   1111    1122344566678999999999


Q ss_pred             HHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchh
Q 015504          324 SDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKF  387 (405)
Q Consensus       324 ~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~  387 (405)
                      +|.+|++++++.++..+++..+++|+++++++++++||+++..+++|+++|+.|.+...+..++
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999999999999999998765443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.94  E-value=8.2e-25  Score=205.19  Aligned_cols=212  Identities=21%  Similarity=0.234  Sum_probs=167.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCcccc
Q 015504          146 KCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADE  225 (405)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~  225 (405)
                      +....+++...+.+.+++.|++|+++++++++.+++|+++++++++++|||+++++++|++++++|++++..++.     
T Consensus        48 ~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~-----  122 (260)
T TIGR00950        48 RLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN-----  122 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc-----
Confidence            344555555667888999999999999999999999999999999999999999999999999999999875432     


Q ss_pred             ccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCC
Q 015504          226 FLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPH  305 (405)
Q Consensus       226 ~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~  305 (405)
                             .+....|+.++++++++|+.|.++.|+..++.++. .... ..+...++.+++.|..   ...+ ++ .  +.
T Consensus       123 -------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~-~~~~-~~~~~~~~~~~l~~~~---~~~~-~~-~--~~  186 (260)
T TIGR00950       123 -------LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPE-LLQF-TGWVLLLGALLLLPFA---WFLG-PN-P--QA  186 (260)
T ss_pred             -------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCch-HHHH-HHHHHHHHHHHHHHHH---HhcC-CC-C--Cc
Confidence                   12346899999999999999999999988643321 1111 1111222233222221   1111 11 1  22


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Q 015504          306 SQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGF  378 (405)
Q Consensus       306 ~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~  378 (405)
                      +...|..+++.+++++.+++.+|++++++.++.++++..+++|+++++++++++||+++..+++|+++++.|+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       187 LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            3456777888999999999999999999999999999999999999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.93  E-value=6.2e-24  Score=203.82  Aligned_cols=214  Identities=17%  Similarity=0.226  Sum_probs=152.7

Q ss_pred             HHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccccccc
Q 015504          155 WFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRR  234 (405)
Q Consensus       155 ~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~  234 (405)
                      ......+.+.|++|++++.++++.+++|+++++++++++|||++++++.|++++++|+++....+.             +
T Consensus        75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~-------------~  141 (302)
T TIGR00817        75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTEL-------------S  141 (302)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcc-------------c
Confidence            455667889999999999999999999999999999999999999999999999999987642211             2


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcC--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-Cc-cC--CCc-h
Q 015504          235 HNITGDIFGLLSAITYGLFTVLLKKSAG--SEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEP-PF-RF--PHS-Q  307 (405)
Q Consensus       235 ~~~~G~~l~l~sa~~~a~y~v~~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~~-~~--~~~-~  307 (405)
                      ....|++++++++++||+|.++.||..+  +.++ ..   ...+...++.+.+.|........+..+ .+ ..  ... .
T Consensus       142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~---~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~  217 (302)
T TIGR00817       142 FNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDK-TN---LYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVT  217 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-cc---HHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCch
Confidence            2467999999999999999999999876  3222 11   222223333333333322111000000 00 00  001 1


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCc
Q 015504          308 SVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       308 ~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      ..+...++.+..+....+.+++.++++++|+++++..+++|+++++++++++||+++..+++|++++++|++++++.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       218 KIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            122222232322233333566689999999999999999999999999999999999999999999999999998643

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.91  E-value=2.1e-22  Score=196.49  Aligned_cols=226  Identities=12%  Similarity=0.160  Sum_probs=166.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 015504          141 SWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKT  220 (405)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~  220 (405)
                      .++++..++++...    +...+.|+++++++.++++.++.|+++++++++++|||++++++.+++++++|+++.+.++.
T Consensus       114 ~~~llp~gl~~~~~----~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~  189 (350)
T PTZ00343        114 LKNFLPQGLCHLFV----HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL  189 (350)
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc
Confidence            44555555554433    33456999999999999999999999999999999999999999999999999999885432


Q ss_pred             CccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCC---cchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 015504          221 WAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGD---KVDVQKFFGYIGLFTFLGLWWLIWPLNAAGI  297 (405)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (405)
                                   +.+..|+++++++++++|+|.++.||..++.+.   ..+......+..+++.+++.|..........
T Consensus       190 -------------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~  256 (350)
T PTZ00343        190 -------------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKW  256 (350)
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence                         225689999999999999999999998875431   1222223333334444444444332111000


Q ss_pred             CCCc---cCCCchhHHHHHHHHHHHHHHHHHHHHHH----HHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHH
Q 015504          298 EPPF---RFPHSQSVGEVLLLNGFVGSVLSDYFWAL----SVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFG  370 (405)
Q Consensus       298 e~~~---~~~~~~~~~~~il~~g~~~t~l~~~l~~~----~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG  370 (405)
                      ...+   ..+.....+..+++. ++.+++++++|+.    ++++++|.+.++..+++|+++++++++++||+++..+++|
T Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG  335 (350)
T PTZ00343        257 VPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLG  335 (350)
T ss_pred             HHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHH
Confidence            0000   000011122334443 4557889999995    9999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcC
Q 015504          371 CLQVFAGFIIANLS  384 (405)
Q Consensus       371 ~~lI~~g~~l~~~~  384 (405)
                      ++++++|++++++-
T Consensus       336 ~~lii~Gv~lYs~~  349 (350)
T PTZ00343        336 MAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999999998764

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.90  E-value=3.2e-22  Score=189.91  Aligned_cols=215  Identities=11%  Similarity=0.051  Sum_probs=160.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCcccccc
Q 015504          148 SLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFL  227 (405)
Q Consensus       148 ~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~  227 (405)
                      .+.++.......++++.|+++++++.++.+.+++|+++.+++++++|||+++++++|+++++.|++++..++..      
T Consensus        66 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~------  139 (281)
T TIGR03340        66 LAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA------  139 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc------
Confidence            34445555667788899999999999999999999999999999999999999999999999999988754321      


Q ss_pred             ccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCch
Q 015504          228 SASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQ  307 (405)
Q Consensus       228 ~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~  307 (405)
                            ..+..|+.++++++++|+.|.++.|+..++.++............+..   ..|........+..+ . .+ ..
T Consensus       140 ------~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~-~~-~~  207 (281)
T TIGR03340       140 ------QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAM---GWPFLLLYLKRHGRS-M-FP-YA  207 (281)
T ss_pred             ------ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHH---HHHHHHHHHHHhccc-h-hh-hH
Confidence                  123468889999999999999998886543222222111111111111   011111111111110 1 11 12


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHH
Q 015504          308 SVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFII  380 (405)
Q Consensus       308 ~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l  380 (405)
                      ..++.+++.+.+++.++|.+|++++++.++..++...+++|+++.+++++++||+++..+++|+++|+.|+++
T Consensus       208 ~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       208 RQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            2345667778888999999999999999999999999999999999999999999999999999999999876

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.89  E-value=2.3e-20  Score=177.13  Aligned_cols=217  Identities=20%  Similarity=0.263  Sum_probs=170.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHH-HhccccchHHHHHHHHHhhhceEEEEecCCCccc
Q 015504          146 KCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGA-LLGQDSITIAKLVAVFISMAGVAMTTVGKTWAAD  224 (405)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~-l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~  224 (405)
                      +..+.++......+.+++.++++++++.++.+.+++|+++.++++ ++++||+++.++.++++++.|++++..++...  
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~--  148 (292)
T COG0697          71 LLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG--  148 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc--
Confidence            344445556677888999999999999999999999999999997 77799999999999999999999999876521  


Q ss_pred             cccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCC
Q 015504          225 EFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFP  304 (405)
Q Consensus       225 ~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  304 (405)
                             ... ...|+.+++++++++|+|.+..|+.. +.++ ......  +..........    +....  +  ...+
T Consensus       149 -------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~-~~~~~~--~~~~~~~~~~~----~~~~~--~--~~~~  208 (292)
T COG0697         149 -------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLGP-VTLALL--LQLLLALLLLL----LFFLS--G--FGAP  208 (292)
T ss_pred             -------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCCh-HHHHHH--HHHHHHHHHHH----HHHhc--c--cccc
Confidence                   001 57899999999999999999999987 3222 221111  11111111110    11111  1  1133


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcC
Q 015504          305 HSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       305 ~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                      .....|..+.+.|++++++++.+|++++++.++..++...+++|+++++++++++||+++..+++|+++++.|+.+.+..
T Consensus       209 ~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         209 ILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            44556888899999999999999999999999999999999988889999999999999999999999999999999876

>TIGR00688 rarD rarD protein

Probab=99.89  E-value=4.1e-21  Score=179.88  Aligned_cols=254  Identities=11%  Similarity=0.040  Sum_probs=173.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeeheecchhhHHHHHHHHHHHHHHhhhhhhhcccccCCCcccCCCCCCC
Q 015504            7 AGLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLFGNRSLTSTSTGLD   86 (405)
Q Consensus         7 ~g~~~~l~~~i~w~~~~~l~q~i~~~~~~P~~~t~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (405)
                      +|.+++++.+++|+.+...+|++ .+ ..|+.+++.|.....+.+.++...      .+++++..               
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~------~~~~~~~~---------------   58 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTL------FRQWAALI---------------   58 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHH------HcchHHHH---------------
Confidence            38899999999999999999984 33 799999999987766654322211      01110000               


Q ss_pred             CcccccccccchhhhhhcccccCcCcCccccCCcccccCCCCCcchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015504           87 IPLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSAL  166 (405)
Q Consensus        87 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al  166 (405)
                                                                  +..+   +..+++........+++....+.+|+.|+
T Consensus        59 --------------------------------------------~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~a~   91 (256)
T TIGR00688        59 --------------------------------------------ERLK---RIQKRPLILSLLLCGLLIGFNWWLFIWAV   91 (256)
T ss_pred             --------------------------------------------HHHh---CcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                        0000   01112222233334445667889999999


Q ss_pred             hccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccccccccchhhHHHHHHH
Q 015504          167 ANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRHNITGDIFGLLS  246 (405)
Q Consensus       167 ~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~s  246 (405)
                      +++++++++++.+++|+|+++++++++|||++++++++++++++|++++..+++           +  ..    .+++++
T Consensus        92 ~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-----------~--~~----~~~l~a  154 (256)
T TIGR00688        92 NNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-----------S--LP----WEALVL  154 (256)
T ss_pred             HcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-----------C--ch----HHHHHH
Confidence            999999999999999999999999999999999999999999999998754321           0  11    467899


Q ss_pred             HHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHHHHHHHHHHH
Q 015504          247 AITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDY  326 (405)
Q Consensus       247 a~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g~~~t~l~~~  326 (405)
                      +++||.|.+..|+..+++ . .  ....+  .+.......+.   ....+.+. .........|..+++.|++ +.++|.
T Consensus       155 a~~~a~~~i~~~~~~~~~-~-~--~~~~~--~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~l~~~g~~-t~i~~~  223 (256)
T TIGR00688       155 AFSFTAYGLIRKALKNTD-L-A--GFCLE--TLSLMPVAIYY---LLQTDFAT-VQQTNPFPIWLLLVLAGLI-TGTPLL  223 (256)
T ss_pred             HHHHHHHHHHHhhcCCCC-c-c--hHHHH--HHHHHHHHHHH---HHHhccCc-ccccCchhHHHHHHHHHHH-HHHHHH
Confidence            999999999999976532 1 1  11111  11111111111   11111111 1111112367777888876 889999


Q ss_pred             HHHHHHHhhchHHHHHHhhchHHHHHHHHHHH
Q 015504          327 FWALSVVWTTPLVATLGMSLTMPLAMVADMVI  358 (405)
Q Consensus       327 l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~  358 (405)
                      +|+.++|+.++.++++..+++|+++++++++.
T Consensus       224 l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       224 AFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.88  E-value=1.3e-22  Score=173.28  Aligned_cols=242  Identities=16%  Similarity=0.281  Sum_probs=206.6

Q ss_pred             hhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhc
Q 015504          132 VLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAG  211 (405)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~G  211 (405)
                      ....+..+..|.+++....+.++|..+||.|..|++..+++.++.++.+...|+++++++.+++|+...|+++.++++.|
T Consensus        40 ~FGe~kG~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~G  119 (290)
T KOG4314|consen   40 IFGEDKGFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGG  119 (290)
T ss_pred             HhccccCceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCc
Confidence            34444456666666667777788999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEecCCCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 015504          212 VAMTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWP  291 (405)
Q Consensus       212 v~ll~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (405)
                      ++++++.|..           ..+.+.|+.+++.+|...|+|.++.|+...+ ....+...+++..|.+++.+.|....+
T Consensus       120 iVmiay~DN~-----------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGn-An~Gdaa~FmS~LGF~NL~~~~~~~lI  187 (290)
T KOG4314|consen  120 IVMIAYADNE-----------HADEIIGIACAVGSAFMAALYKVLFKMFIGN-ANFGDAAHFMSCLGFFNLCFISFPALI  187 (290)
T ss_pred             EEEEEeccch-----------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHHHHHHhhhHHH
Confidence            9999988762           2347899999999999999999999999884 445677888999999999998877778


Q ss_pred             HhhcCCCCCcc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHH
Q 015504          292 LNAAGIEPPFR-FPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFG  370 (405)
Q Consensus       292 ~~~~~~e~~~~-~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG  370 (405)
                      +.++|.|. ++ +..  ..|..++..+.+ +.....+.+.++..+.|...|+++.+.+|..+..|.++.+-.++...+.|
T Consensus       188 L~~T~VE~-~qsFA~--~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~  263 (290)
T KOG4314|consen  188 LAFTGVEH-LQSFAA--APWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAA  263 (290)
T ss_pred             HHHhchHH-HHHHhh--CCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHH
Confidence            88999885 32 222  226566665554 55667888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCchhhh
Q 015504          371 CLQVFAGFIIANLSDKFSA  389 (405)
Q Consensus       371 ~~lI~~g~~l~~~~~~~~~  389 (405)
                      .++|+.|+++...++.+++
T Consensus       264 T~iI~i~FiLiiiP~d~~e  282 (290)
T KOG4314|consen  264 TCIICIGFILIIIPEDKDE  282 (290)
T ss_pred             HHHHHHhHHheecccchhh
Confidence            9999999999999876543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.85  E-value=2.6e-19  Score=170.40  Aligned_cols=223  Identities=14%  Similarity=0.131  Sum_probs=169.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhh-hhHHHHHHHHHHhccccchHHH----HHHHHHhhhceEEEE
Q 015504          142 WAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTS-TSGLFTLFFGALLGQDSITIAK----LVAVFISMAGVAMTT  216 (405)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~-~~pv~~~ils~l~~~er~~~~~----~~~i~l~~~Gv~ll~  216 (405)
                      ++.+..+++++..|..+|++|+.+.++++++.+..+.+ ++++++.+++.+++|||.++++    ++|++++++|++++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            46777889999999999999999999999999999988 8899999999999999999999    999999999999998


Q ss_pred             ecCCCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015504          217 VGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAG  296 (405)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (405)
                      ..+..+..+     +...+...|++++++++++|+.|.+..|+..  .++............+.+.++. +   +.  . 
T Consensus       136 ~~~~~~~~~-----~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~-~---~~--~-  201 (290)
T TIGR00776       136 RSKDKSAGI-----KSEFNFKKGILLLLMSTIGYLVYVVVAKAFG--VDGLSVLLPQAIGMVIGGIIFN-L---GH--I-  201 (290)
T ss_pred             ecccccccc-----ccccchhhHHHHHHHHHHHHHHHHHHHHHcC--CCcceehhHHHHHHHHHHHHHH-H---HH--h-
Confidence            764321100     0002236799999999999999999999863  2322221111111111222211 1   11  0 


Q ss_pred             CCCCccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH-hhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHH----HHH
Q 015504          297 IEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVV-WTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYI----FGC  371 (405)
Q Consensus       297 ~e~~~~~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~-~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~i----iG~  371 (405)
                      ..+  +. .....|.. +..|++ +.+++.+|..+.+ +.++..+++...++|+++.+++++++||+.+..++    +|+
T Consensus       202 ~~~--~~-~~~~~~~~-~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~  276 (290)
T TIGR00776       202 LAK--PL-KKYAILLN-ILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGI  276 (290)
T ss_pred             ccc--ch-HHHHHHHH-HHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHH
Confidence            001  11 12233434 448887 8999999999999 99999999999999888999999999999999999    999


Q ss_pred             HHHHHHHHHhhc
Q 015504          372 LQVFAGFIIANL  383 (405)
Q Consensus       372 ~lI~~g~~l~~~  383 (405)
                      ++++.|..+...
T Consensus       277 ~lIi~~~~l~~~  288 (290)
T TIGR00776       277 ILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHhc
Confidence            999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.78  E-value=7.7e-19  Score=156.97  Aligned_cols=218  Identities=15%  Similarity=0.164  Sum_probs=170.0

Q ss_pred             HHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCcccc-ccccccccccc
Q 015504          158 TEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADE-FLSASESRRHN  236 (405)
Q Consensus       158 ~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~-~~~~~~~~~~~  236 (405)
                      +....++|++|.+.++++++..++|+||.+++|+++|||+++...++..+.+.|++++..+...=.++ +..++...+..
T Consensus       110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~  189 (346)
T KOG4510|consen  110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYD  189 (346)
T ss_pred             HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccccc
Confidence            44455799999999999999999999999999999999999999999999999999998654311110 00011123456


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHH
Q 015504          237 ITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLN  316 (405)
Q Consensus       237 ~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~  316 (405)
                      ..|...++.+++.-|--.++.|+.-++.+...++.. ++   +++++....   .....|   .+.+|+....|+..+.+
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsy-f~---~i~lV~s~I---~~~~ig---~~~lP~cgkdr~l~~~l  259 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSY-FS---LITLVVSLI---GCASIG---AVQLPHCGKDRWLFVNL  259 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehH-HH---HHHHHHHHH---HHhhcc---ceecCccccceEEEEEe
Confidence            678888888888888888888988775554444332 22   223222111   222233   27899988899988889


Q ss_pred             HHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          317 GFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       317 g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      |++ ..++..+...+++.-.+..+++..+...++|.+++++++|+.++++.++|+++|+.+.+.+...+.
T Consensus       260 Gvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw  328 (346)
T KOG4510|consen  260 GVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW  328 (346)
T ss_pred             hhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence            987 688999999999999999999999999999999999999999999999999999999888777544

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.78  E-value=9.4e-17  Score=154.06  Aligned_cols=239  Identities=22%  Similarity=0.262  Sum_probs=177.3

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 015504          140 SSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGK  219 (405)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~  219 (405)
                      +.++....    ++++++++.+-+.|++|+|.+...++.++.|+++++++.+++|+|.++.+++++++..+|+++...++
T Consensus        63 ~~~~~~~~----~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~  138 (303)
T PF08449_consen   63 PLKKYAIL----SFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSD  138 (303)
T ss_pred             hHHHHHHH----HHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecc
Confidence            44554444    34566778888999999999999999999999999999999999999999999999999999999876


Q ss_pred             CCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 015504          220 TWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEP  299 (405)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  299 (405)
                      ..+...+.   ........|+++.+++.++.|++.+..||..++++..  ....+.+..++++++.++....+......+
T Consensus       139 ~~~~~~~~---~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~--~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~  213 (303)
T PF08449_consen  139 SSSSSSSN---SSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKS--PWELMFYTNLFSLPFLLILLFLLPTGEFRS  213 (303)
T ss_pred             cccccccc---cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHHHHHHHhhHhhH
Confidence            54322110   1112233499999999999999999999998754332  233444445555555443333311000100


Q ss_pred             Ccc-CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Q 015504          300 PFR-FPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGF  378 (405)
Q Consensus       300 ~~~-~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~  378 (405)
                      ..+ ....+..+..++...+ +..++....+..+++.+|...++..++.-+++++++++++|+++++.+++|.++++.|.
T Consensus       214 ~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~  292 (303)
T PF08449_consen  214 AIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGI  292 (303)
T ss_pred             HHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHH
Confidence            011 1112334555555555 36777788888999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCchhh
Q 015504          379 IIANLSDKFS  388 (405)
Q Consensus       379 ~l~~~~~~~~  388 (405)
                      .+.++.++++
T Consensus       293 ~~~~~~~~k~  302 (303)
T PF08449_consen  293 FLYSYAKKKK  302 (303)
T ss_pred             HHHHHhhccC
Confidence            9999876543

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.71  E-value=4.7e-15  Score=132.14  Aligned_cols=205  Identities=15%  Similarity=0.091  Sum_probs=154.3

Q ss_pred             HHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCcccccccccccccc
Q 015504          156 FITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRRH  235 (405)
Q Consensus       156 ~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~~  235 (405)
                      ..-|++||.+++..+-+.+..+-++-|+.+++++.    +  +.+..+.+.+++.|+.++.-.+.+          ..+.
T Consensus        82 g~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~~----------~~~l  145 (292)
T COG5006          82 GGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWLLLPLGQS----------VWSL  145 (292)
T ss_pred             HHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHhheeccCC----------cCcC
Confidence            34688999999999999999999999999888764    3  345566677788888888754421          1234


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHH
Q 015504          236 NITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLL  315 (405)
Q Consensus       236 ~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~  315 (405)
                      ...|..+++.++.||+.|.+..+|.-+.++....+..-+.    +..++..|+    -..+..+  .+ .++......+.
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~----vAaviv~Pi----g~~~ag~--~l-~~p~ll~laLg  214 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGML----VAALIVLPI----GAAQAGP--AL-FSPSLLPLALG  214 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHH----HHHHHHhhh----hhhhcch--hh-cChHHHHHHHH
Confidence            5689999999999999999999998753333333322222    222222222    1111221  11 12345666778


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchh
Q 015504          316 NGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKF  387 (405)
Q Consensus       316 ~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~  387 (405)
                      .+++++.+.|.+-+.++++.++..-++.+++||.++++.+++++||++|..|++|..+|+.+..-.....|+
T Consensus       215 vavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         215 VAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            899999999999999999999999999999999999999999999999999999999999988866665443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.65  E-value=6.5e-14  Score=128.14  Aligned_cols=219  Identities=15%  Similarity=0.129  Sum_probs=164.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCcccc
Q 015504          146 KCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADE  225 (405)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~  225 (405)
                      ......+.+...+...|.+|...-.+-++++=+...|++..+++.+++|||+++.|+++++++.+||.......+     
T Consensus        73 ~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g-----  147 (293)
T COG2962          73 LMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG-----  147 (293)
T ss_pred             HHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-----
Confidence            334445566777888999999999999999999999999999999999999999999999999999999876543     


Q ss_pred             ccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCC
Q 015504          226 FLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPH  305 (405)
Q Consensus       226 ~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~  305 (405)
                              +-.+    .++.=|++|++|..+-|+..-  +    ...-+....+...+   +......+.+.++.+....
T Consensus       148 --------~lpw----val~la~sf~~Ygl~RK~~~v--~----a~~g~~lE~l~l~p---~al~yl~~l~~~~~~~~~~  206 (293)
T COG2962         148 --------SLPW----VALALALSFGLYGLLRKKLKV--D----ALTGLTLETLLLLP---VALIYLLFLADSGQFLQQN  206 (293)
T ss_pred             --------CCcH----HHHHHHHHHHHHHHHHHhcCC--c----hHHhHHHHHHHHhH---HHHHHHHHHhcCchhhhcC
Confidence                    1122    345567889999877665432  2    12222222222111   1112222222221111112


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCc
Q 015504          306 SQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       306 ~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      +...+..++..|.+ |.++..++..+.++++-...++..+.+|.+-.+++++++||+++..+++..++|-.|++++..+.
T Consensus       207 ~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         207 ANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             CchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            34567777888887 89999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             hhhhhH
Q 015504          386 KFSAKI  391 (405)
Q Consensus       386 ~~~~~~  391 (405)
                      ..+++|
T Consensus       286 l~~~r~  291 (293)
T COG2962         286 LYTARK  291 (293)
T ss_pred             HHHHhh
Confidence            544433

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.65  E-value=3.1e-14  Score=131.58  Aligned_cols=223  Identities=19%  Similarity=0.221  Sum_probs=160.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 015504          140 SSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGK  219 (405)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~  219 (405)
                      .+++.+++++. +++|.+.|.+.+.++++.+++...++.++-.++|++++++++|+|+++++|.++++.++|+.++..++
T Consensus        13 ~~~~~~~~~vP-A~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~   91 (244)
T PF04142_consen   13 SPKDTLKLAVP-ALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS   91 (244)
T ss_pred             hHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence            45566666655 67899999999999999999999999999999999999999999999999999999999999998766


Q ss_pred             CCccccccc----cccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHhh
Q 015504          220 TWAADEFLS----ASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDV-QKFFGYIGLFTFLGLWWLIWPLNA  294 (405)
Q Consensus       220 ~~~~~~~~~----~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  294 (405)
                      ....+.+.+    ......+...|.++.++++++.|+..++.+|..|+.+..... ...+...|++...+   .   ...
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~---~---~~~  165 (244)
T PF04142_consen   92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL---A---LLL  165 (244)
T ss_pred             ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH---H---Hhc
Confidence            543211100    001234578999999999999999999999999864322211 22222223222221   1   111


Q ss_pred             cCCCC----CccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHH
Q 015504          295 AGIEP----PFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFG  370 (405)
Q Consensus       295 ~~~e~----~~~~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG  370 (405)
                      .+.++    .+.-..+...|..++.     ..++-.+....+|+.+...=+....++.+++.+.+++++|.+++...++|
T Consensus       166 ~~~~~~~~~g~f~G~~~~~~~~i~~-----~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg  240 (244)
T PF04142_consen  166 SDGSAISESGFFHGYSWWVWIVIFL-----QAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG  240 (244)
T ss_pred             ccccccccCCchhhcchHHHHHHHH-----HHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence            12211    0101112223333333     34444556678899999999999999999999999999999999999999


Q ss_pred             HHHH
Q 015504          371 CLQV  374 (405)
Q Consensus       371 ~~lI  374 (405)
                      +.++
T Consensus       241 ~~~V  244 (244)
T PF04142_consen  241 AALV  244 (244)
T ss_pred             eecC
Confidence            8764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.61  E-value=6.6e-13  Score=124.93  Aligned_cols=234  Identities=18%  Similarity=0.199  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 015504          141 SWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKT  220 (405)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~  220 (405)
                      +++..+.++. +++|.+.|.+++.++.+.++++..+..++-...|++++.+++++|+++++|.++++.++|+.++-.+..
T Consensus        89 ~~~~lk~~vP-a~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   89 PRETLKVSVP-ALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             hHHHHHHHHH-HHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence            3456666666 558999999999999999999999999999999999999999999999999999999999999984433


Q ss_pred             CccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 015504          221 WAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKV-DVQKFFGYIGLFTFLGLWWLIWPLNAAGIEP  299 (405)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  299 (405)
                      .+.++.  ......+...|....+.+++..++-.++.+|..++..... -....+...|++...+      .....++|+
T Consensus       168 ~~~~a~--~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l------~~~~~d~~~  239 (345)
T KOG2234|consen  168 SPTGAK--SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLL------TILLQDGEA  239 (345)
T ss_pred             CCCCcc--CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH------HHhhccccc
Confidence            222111  0123456889999999999999999999999997433221 1233333334332221      122233442


Q ss_pred             C----ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHH
Q 015504          300 P----FRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVF  375 (405)
Q Consensus       300 ~----~~~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~  375 (405)
                      .    +-..++...|..++.+++-     -.+....+|+.+...=....++.++++.+.++.++|-++|....+|..+|+
T Consensus       240 i~~~gff~G~s~~vw~vVl~~a~g-----GLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi  314 (345)
T KOG2234|consen  240 INEYGFFYGYSSIVWLVVLLNAVG-----GLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVI  314 (345)
T ss_pred             cccCCccccccHHHHHHHHHHhcc-----chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHH
Confidence            1    1123344556655555543     344456778888888888888888999999999999999999999999999


Q ss_pred             HHHHHhhcCchhh
Q 015504          376 AGFIIANLSDKFS  388 (405)
Q Consensus       376 ~g~~l~~~~~~~~  388 (405)
                      .++.++...++.+
T Consensus       315 ~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  315 LSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHhhcCCccc
Confidence            9999999766654

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.60  E-value=2.7e-13  Score=122.41  Aligned_cols=229  Identities=18%  Similarity=0.174  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccc
Q 015504          151 LTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSAS  230 (405)
Q Consensus       151 ~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~  230 (405)
                      -+++...+..+.+.|+.+|+++..+++.....+|+.+++.-+++++++.++|+|+.....|++.+...|....+++   .
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p---~  168 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDP---Y  168 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCC---c
Confidence            3456666777888999999999999999999999999999999999999999999999999999987654322111   1


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccC-CCc---
Q 015504          231 ESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRF-PHS---  306 (405)
Q Consensus       231 ~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~---  306 (405)
                      .+.+....|+++.+++.+.-|++.++.+|..++.  .+.+....++.|+++++++.....++++......+.- |..   
T Consensus       169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~--nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~e  246 (372)
T KOG3912|consen  169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS--NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLE  246 (372)
T ss_pred             cccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc--cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchh
Confidence            3446678999999999999999999999988743  4556777888888887766555555555322211211 110   


Q ss_pred             --hhHHHH-----HHHHHHHHHHHHHHHHHH----HHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHH
Q 015504          307 --QSVGEV-----LLLNGFVGSVLSDYFWAL----SVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVF  375 (405)
Q Consensus       307 --~~~~~~-----il~~g~~~t~l~~~l~~~----~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~  375 (405)
                        ...|..     .++..+.+..++..+++.    --|..++++-++.-.+...+-.+++.....|.+...++.|.++.+
T Consensus       247 D~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi  326 (372)
T KOG3912|consen  247 DWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILI  326 (372)
T ss_pred             hHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence              111111     233333344444444443    356788888898888888888888888899999999999999999


Q ss_pred             HHHHHhhcC
Q 015504          376 AGFIIANLS  384 (405)
Q Consensus       376 ~g~~l~~~~  384 (405)
                      .|.++++-.
T Consensus       327 ~Gi~lY~~i  335 (372)
T KOG3912|consen  327 MGIILYNQI  335 (372)
T ss_pred             HHHHHHHHH
Confidence            999999854

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.59  E-value=7.7e-15  Score=138.75  Aligned_cols=230  Identities=18%  Similarity=0.214  Sum_probs=174.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 015504          139 LSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVG  218 (405)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~  218 (405)
                      ...++++.+++..++    +.++-+.++.+.+++...++-+++|+++.++++++.+|+.+......++....|+.+-+..
T Consensus        81 ~~~~~llpl~~~~~~----~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~  156 (316)
T KOG1441|consen   81 LPLRTLLPLGLVFCI----SHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVT  156 (316)
T ss_pred             cchHHHHHHHHHHHH----HHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeec
Confidence            355666666666543    4445569999999999999999999999999999999999999999999999999999875


Q ss_pred             CCCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHH-HHHHHHhhcCC
Q 015504          219 KTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLW-WLIWPLNAAGI  297 (405)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  297 (405)
                      +.             +-+..|.+.++++.+..+++.++.|+..++.....+....+.+.+-+++..+. |...+..-...
T Consensus       157 e~-------------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~  223 (316)
T KOG1441|consen  157 EL-------------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF  223 (316)
T ss_pred             cc-------------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce
Confidence            43             34789999999999999999999999986333344444556666666666665 54333211111


Q ss_pred             CCCccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHH
Q 015504          298 EPPFRF-PHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFA  376 (405)
Q Consensus       298 e~~~~~-~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~  376 (405)
                       ..+.. +.+-. ....+++. ++....+...+..+.+++|.+-++...+.-.++++.++++++++.++.+..|+++.++
T Consensus       224 -~~~~~~~~~~~-~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~  300 (316)
T KOG1441|consen  224 -VGFLTAPWFVT-FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAIL  300 (316)
T ss_pred             -eeeeccccchh-hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHH
Confidence             00011 22222 22334444 3456667777888999999999999999988899999999999999999999999999


Q ss_pred             HHHHhhcCchhh
Q 015504          377 GFIIANLSDKFS  388 (405)
Q Consensus       377 g~~l~~~~~~~~  388 (405)
                      |++++++.+.++
T Consensus       301 Gv~~Y~~~k~~~  312 (316)
T KOG1441|consen  301 GVFLYSRAKLKE  312 (316)
T ss_pred             HHHHHHHHhhhh
Confidence            999998865433

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.49  E-value=8e-15  Score=130.59  Aligned_cols=217  Identities=18%  Similarity=0.210  Sum_probs=163.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccc
Q 015504          149 LYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLS  228 (405)
Q Consensus       149 ~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~  228 (405)
                      ++.++...-+|++-..|.|||+.+...++-+-..+.+.+++|+++|-|-.+.|+.|+++|+.|++++.+.|..+.|..  
T Consensus        82 illa~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~a--  159 (336)
T KOG2766|consen   82 ILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRA--  159 (336)
T ss_pred             hheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecccccc--
Confidence            334445556777777899999999999999999999999999999999999999999999999999999876543322  


Q ss_pred             cccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc---CCC
Q 015504          229 ASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFR---FPH  305 (405)
Q Consensus       229 ~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~---~~~  305 (405)
                         .+++...||.+++++|-+||+.++..+.+.++    .+...++++.|+++.++...=    ..  .|. .+   +.+
T Consensus       160 ---ggsnp~~GD~lvi~GATlYaVSNv~EEflvkn----~d~~elm~~lgLfGaIIsaIQ----~i--~~~-~~~~tl~w  225 (336)
T KOG2766|consen  160 ---GGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN----ADRVELMGFLGLFGAIISAIQ----FI--FER-HHVSTLHW  225 (336)
T ss_pred             ---CCCCCccCcEEEEecceeeeeccccHHHHHhc----CcHHHHHHHHHHHHHHHHHHH----Hh--hhc-cceeeEee
Confidence               34567899999999999999999999998874    345667777788877764321    11  221 11   222


Q ss_pred             chhHHHHHHHH-HHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcC
Q 015504          306 SQSVGEVLLLN-GFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       306 ~~~~~~~il~~-g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                      +   |....+. ..++..+-|.+.-..+|..+++...+.....-..+.++  ..+|-+.++..++..+.+..|++++..+
T Consensus       226 ~---~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  226 D---SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             h---HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            2   2222222 23345666777777888889988887666655567776  5578889999999999999999998655


Q ss_pred             ch
Q 015504          385 DK  386 (405)
Q Consensus       385 ~~  386 (405)
                      ++
T Consensus       301 e~  302 (336)
T KOG2766|consen  301 EK  302 (336)
T ss_pred             cc
Confidence            44

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.36  E-value=5.5e-11  Score=109.12  Aligned_cols=223  Identities=20%  Similarity=0.202  Sum_probs=153.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 015504          138 ELSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTV  217 (405)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~  217 (405)
                      ..++++.++-....++.-.+.--+-+++++|++.+..++.-+++++|+.+++.+|.-||+++.-..-+.+..+|+++.++
T Consensus        77 ~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~  156 (349)
T KOG1443|consen   77 VLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTY  156 (349)
T ss_pred             CCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEe
Confidence            34555555444444444444444557999999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCC----cch----HHHHHHHHHHHHHHHHHHHH
Q 015504          218 GKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGD----KVD----VQKFFGYIGLFTFLGLWWLI  289 (405)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~  289 (405)
                      .+.             +-...|..+.++++++-|+--.+.++.+++.+.    +.+    .+..+++       .+.|..
T Consensus       157 KsT-------------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~-------~Ll~~~  216 (349)
T KOG1443|consen  157 KST-------------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSI-------GLLPLS  216 (349)
T ss_pred             ccc-------------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHH-------HHHHHH
Confidence            754             236789999999999998888887777765431    111    1222221       111221


Q ss_pred             HHHhhcCCC-----CCccCCCchhHHHHHHHHHHHHHHHHHHHH---HHHHHhhchHHHHHHhhchHHHHHHHHHHHcCC
Q 015504          290 WPLNAAGIE-----PPFRFPHSQSVGEVLLLNGFVGSVLSDYFW---ALSVVWTTPLVATLGMSLTMPLAMVADMVIHGR  361 (405)
Q Consensus       290 ~~~~~~~~e-----~~~~~~~~~~~~~~il~~g~~~t~l~~~l~---~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge  361 (405)
                        +.+-|.+     +.+........+..+...++. ..+++.+-   +....+++..+.|+..-.......+++.++.++
T Consensus       217 --l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~-g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d  293 (349)
T KOG1443|consen  217 --LLFEGLHLITSSSIFRFQDTGLILRVIGLISLG-GLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKD  293 (349)
T ss_pred             --HHHcccccchhhhHHHhcCccHHHHHHHHHHHH-HHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhc
Confidence              1111111     111111122234433333332 23333222   234567888888888888888899999999999


Q ss_pred             CccHHHHHHHHHHHHHHHHhhc
Q 015504          362 HYSAIYIFGCLQVFAGFIIANL  383 (405)
Q Consensus       362 ~~~~~~iiG~~lI~~g~~l~~~  383 (405)
                      +++...++|..+...|+.....
T Consensus       294 ~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  294 QLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             chhhhHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999833

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.21  E-value=4.3e-11  Score=105.75  Aligned_cols=221  Identities=18%  Similarity=0.185  Sum_probs=168.0

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCcccccccccc
Q 015504          152 TPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASE  231 (405)
Q Consensus       152 ~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~~  231 (405)
                      ..-|.+++..-+.|++|.+-.+..+--++-|+-++++++++.+++.+++|-.++++.++|+++..+.+......      
T Consensus        92 s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~------  165 (337)
T KOG1580|consen   92 SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGA------  165 (337)
T ss_pred             HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCC------
Confidence            34566777777899999999999999999999999999999999999999999999999999999875432111      


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc----CCCch
Q 015504          232 SRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFR----FPHSQ  307 (405)
Q Consensus       232 ~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~  307 (405)
                      .......|.++.+++-..-++......+....+.+ ...++ +...-+++.+.+...   +.++| |- ++    ....+
T Consensus       166 e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~-~g~~M-M~~~NlwStL~Lg~g---~lfTG-El-weF~yF~~RhP  238 (337)
T KOG1580|consen  166 EDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQR-TGTSM-MFYTNLWSTLYLGAG---LLFTG-EL-WEFFYFVQRHP  238 (337)
T ss_pred             cccccchHHHHHHHHHHhcccchhHHHHHHHhhcc-Cchhh-HHHHHHHHHHHhhhh---heehh-hH-HHHHHHHHhcc
Confidence            12346789999999999999999998887664332 22222 222344444332111   11222 21 11    11124


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          308 SVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       308 ~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      ..|+-+...++ ++.++..+.+.-+..-+|..-|+.....-.++++.++++++.+++.+||+|.++++.|...-....+
T Consensus       239 ~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK  316 (337)
T KOG1580|consen  239 YVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGK  316 (337)
T ss_pred             HHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCC
Confidence            56777777776 5899999999999999999999998888889999999999999999999999999999887665443

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.16  E-value=4e-10  Score=90.56  Aligned_cols=134  Identities=19%  Similarity=0.170  Sum_probs=101.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCC--CchhHHHHHHHH
Q 015504          239 GDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFP--HSQSVGEVLLLN  316 (405)
Q Consensus       239 G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~~il~~  316 (405)
                      ..++++++|+.+++..++.|--.++.++...+. .-..+.++.+..      .....|   .++.+  .+++.|..++..
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~-IRtiVi~~~l~~------v~~~~g---~~~~~~~~~~k~~lflilS   73 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATT-IRTIVILIFLLI------VLLVTG---NWQAGGEIGPKSWLFLILS   73 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHH-HHHHHHHHHHHH------HHHhcC---ceecccccCcceehhhhHH
Confidence            468999999999999999998777544443322 222222221111      222333   13333  346778888888


Q ss_pred             HHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhc
Q 015504          317 GFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL  383 (405)
Q Consensus       317 g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~  383 (405)
                      |+ .++++..+|+.+++.-.+..+.....+.+.++++++++++||+++..+++|+++|++|.+++.+
T Consensus        74 Gl-a~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          74 GL-AGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HH-HHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            85 6899999999999999999999999999999999999999999999999999999999988754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.11  E-value=6.7e-09  Score=96.05  Aligned_cols=218  Identities=15%  Similarity=0.139  Sum_probs=158.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHh-hhhHHHHHHHHHHhccccchHHH----HHHHHHhhhceEEEE
Q 015504          142 WAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLT-STSGLFTLFFGALLGQDSITIAK----LVAVFISMAGVAMTT  216 (405)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~-~~~pv~~~ils~l~~~er~~~~~----~~~i~l~~~Gv~ll~  216 (405)
                      .+.+..+++.|.+|.++|..++.+.++..++.+.-+. ..+-+.+.++++++++|.-+..+    .+|+++.++|+++.+
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            4677888999999999999999999999999999996 56778899999999999877554    448899999999999


Q ss_pred             ecCCCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015504          217 VGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAG  296 (405)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (405)
                      ..|..+...     ++..+...|....+++.+.|..|.++.|-..-   +..+....... |.+...+      .+....
T Consensus       122 ~~~~~~~~~-----~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~---~~~~~~lPqai-Gm~i~a~------i~~~~~  186 (269)
T PF06800_consen  122 YQDKKSDKS-----SSKSNMKKGILALLISTIGYWIYSVIPKAFHV---SGWSAFLPQAI-GMLIGAF------IFNLFS  186 (269)
T ss_pred             ccccccccc-----ccccchhhHHHHHHHHHHHHHHHHHHHHhcCC---ChhHhHHHHHH-HHHHHHH------HHhhcc
Confidence            876543211     12345678999999999999999999876432   22333222222 2222111      111111


Q ss_pred             CCCCccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccH----HHHHHHH
Q 015504          297 IEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSA----IYIFGCL  372 (405)
Q Consensus       297 ~e~~~~~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~----~~iiG~~  372 (405)
                       +  .. ......|. -+..|++ ..++..++..+.+..+...+=...-+.++++.+.+.+++||+=+.    ..++|.+
T Consensus       187 -~--~~-~~~k~~~~-nil~G~~-w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~  260 (269)
T PF06800_consen  187 -K--KP-FFEKKSWK-NILTGLI-WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLI  260 (269)
T ss_pred             -c--cc-ccccchHH-hhHHHHH-HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHH
Confidence             1  11 11122343 4555665 788999999999999988888888888889999999999998665    4567888


Q ss_pred             HHHHHHHH
Q 015504          373 QVFAGFII  380 (405)
Q Consensus       373 lI~~g~~l  380 (405)
                      +++.|.++
T Consensus       261 Liv~G~il  268 (269)
T PF06800_consen  261 LIVIGAIL  268 (269)
T ss_pred             HHHHhhhc
Confidence            88888764

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.08  E-value=5.8e-08  Score=89.52  Aligned_cols=223  Identities=15%  Similarity=0.143  Sum_probs=166.3

Q ss_pred             HHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCccccccccccccc
Q 015504          155 WFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWAADEFLSASESRR  234 (405)
Q Consensus       155 ~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~~~~~~~~~~~~~  234 (405)
                      -.++.++.+.||+|++-.+.++--++-.+-+++.+.++.|+|.+..+-+...+...|+.+.+..+.++...    +....
T Consensus        93 n~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~----~~g~~  168 (327)
T KOG1581|consen   93 NTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSS----KSGRE  168 (327)
T ss_pred             hhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCcc----ccCCC
Confidence            34467788999999999999999999999999999999999999999999999999999988765432111    12234


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc-CCCchhHHHHH
Q 015504          235 HNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFR-FPHSQSVGEVL  313 (405)
Q Consensus       235 ~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~~~~i  313 (405)
                      +..+|+.+....-+.-++.+....++.++  ...+...++..+-++..+.-. ...+.....+++ .+ ....+..++-+
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~--~k~s~~~mM~~vNLf~~i~~~-~~li~qg~~~~a-v~F~~~hp~~~~Di  244 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKK--YKVSSLHMMFGVNLFSAILNG-TYLILQGHLLPA-VSFIKEHPDVAFDI  244 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhcc--CCccHhHHHHHHHHHHHHHHH-HhhhcCCCCchH-HHHHHcChhHHHHH
Confidence            67899999999999999999999998873  333333334434454444211 111111111111 11 12234556666


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          314 LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       314 l~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      +..... ..++..+.+.-++.-+|..-+.++...-.++++++.+.+|.+.+..+++|..+++.|+.+-.+-++
T Consensus       245 ~l~s~~-gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~  316 (327)
T KOG1581|consen  245 LLYSTC-GAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKK  316 (327)
T ss_pred             HHHHHh-hhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHH
Confidence            666654 678888888899999999999999999999999999999999999999999999999988766443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.06  E-value=1.3e-09  Score=89.81  Aligned_cols=125  Identities=17%  Similarity=0.200  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHHHHHHHHHHHH
Q 015504          248 ITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYF  327 (405)
Q Consensus       248 ~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g~~~t~l~~~l  327 (405)
                      ++||.+.+..|+..++.+ ....   ..+....+.+ +.+.   ....+.+  .....+...+...++.+++++.+++.+
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~---~~~~~~~~~~-~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSI---TFWRFLIAGI-LLIL---LLILGRK--PFKNLSPRQWLWLLFLGLLGTALAYLL   70 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHH---HHHHHHHHHH-HHHH---HHhhccc--cccCCChhhhhhhhHhhccceehHHHH
Confidence            468899999999887532 2222   2222222221 1111   1111111  112223345666788888888999999


Q ss_pred             HHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhh
Q 015504          328 WALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIAN  382 (405)
Q Consensus       328 ~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~  382 (405)
                      ++.+++++++..+++...++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus        71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.05  E-value=2.7e-08  Score=92.70  Aligned_cols=227  Identities=19%  Similarity=0.170  Sum_probs=158.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 015504          140 SSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGK  219 (405)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~  219 (405)
                      ..|+++...++.    ++..+.-..+++|.+++..+++....|+++++...+++|.|++...+.++....+|......+|
T Consensus        76 ~~kk~~P~~~lf----~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d  151 (314)
T KOG1444|consen   76 TAKKWFPVSLLF----VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD  151 (314)
T ss_pred             HHHHHccHHHHH----HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc
Confidence            445666655553    3333444689999999999999999999999999999999999999999999999998877665


Q ss_pred             CCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHhhcC-C
Q 015504          220 TWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGD-KVDVQKFFGYIGLFTFLGLWWLIWPLNAAG-I  297 (405)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  297 (405)
                      .             +....|+.|++...+.-+.+.+..|+..+...- ..++   +.+-.++.++.+..   ....+| +
T Consensus       152 ~-------------sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~l---v~yNnl~~L~~l~~---~~~~~ge~  212 (314)
T KOG1444|consen  152 L-------------SFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGL---VFYNNLLSLPPLLI---LSFITGEL  212 (314)
T ss_pred             c-------------eecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeE---EeehhHHHHHHHHH---HHHHhcch
Confidence            3             224459999999999999999999998764321 1111   11111121111110   111111 0


Q ss_pred             C-CCccC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 015504          298 E-PPFRF--PHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQV  374 (405)
Q Consensus       298 e-~~~~~--~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI  374 (405)
                      + -..+.  ......+..+...|+++-++.|. -.+..+..|++.-++......-...+...++.|++.++..++|..+-
T Consensus       213 ~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~  291 (314)
T KOG1444|consen  213 DALSLNFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVG  291 (314)
T ss_pred             HHHHhhcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHH
Confidence            0 00111  11234566677777776666554 45777888888887777666667888888899999999999999999


Q ss_pred             HHHHHHhhcCchhhhh
Q 015504          375 FAGFIIANLSDKFSAK  390 (405)
Q Consensus       375 ~~g~~l~~~~~~~~~~  390 (405)
                      +.|-+++++...++++
T Consensus       292 ~~ggv~Y~~~~~~~k~  307 (314)
T KOG1444|consen  292 FFGGVLYSYATFRKKK  307 (314)
T ss_pred             hhhhhHHhhhhhhhcc
Confidence            9999999987654443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.02  E-value=1.1e-08  Score=87.78  Aligned_cols=144  Identities=19%  Similarity=0.263  Sum_probs=106.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCC---CCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-ccCC-----CchhH
Q 015504          239 GDIFGLLSAITYGLFTVLLKKSAGSE---GDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPP-FRFP-----HSQSV  309 (405)
Q Consensus       239 G~~l~l~sa~~~a~y~v~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~-----~~~~~  309 (405)
                      |.++++++.++.|++.++.|+..++.   ....+....+.+.+..+.+++.|............. ....     .....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            78899999999999999999988752   134444455555566666665555443332221100 0011     12344


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhc
Q 015504          310 GEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL  383 (405)
Q Consensus       310 ~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~  383 (405)
                      +..++..|++ ..+.+...+..+++++|...++...+..++..+++++++||+++..+++|.++.++|+++++|
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5556666665 567788888999999999999999999999999999999999999999999999999998865

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.96  E-value=1.4e-10  Score=104.87  Aligned_cols=232  Identities=17%  Similarity=0.204  Sum_probs=159.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCC
Q 015504          142 WAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTW  221 (405)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~  221 (405)
                      +++.++++.........    +++++|.+++-.-+=.++..+|+.+++++++|||-+..-..+..+.+.|-.+=.-.++ 
T Consensus       103 r~vlplsvVfi~mI~fn----nlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~-  177 (347)
T KOG1442|consen  103 RQVLPLSVVFILMISFN----NLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG-  177 (347)
T ss_pred             Hhhcchhheeeeehhcc----ceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccccc-
Confidence            34444454433332223    5889999999999999999999999999999999999888888777777655332211 


Q ss_pred             ccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 015504          222 AADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPF  301 (405)
Q Consensus       222 ~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  301 (405)
                               ......+.|.++++.++++-|+..+..||......+  ....+..+-.+.+.++..|.+...+-  ++..+
T Consensus       178 ---------~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~--~iw~lt~ynnv~a~lLflpll~lnge--~~~v~  244 (347)
T KOG1442|consen  178 ---------STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGD--CIWRLTAYNNVNALLLFLPLLILNGE--FQAVV  244 (347)
T ss_pred             ---------ccCccchhhhHHHHHHHHHHHHHHHhhheecccccC--eehhhHHHHHHHHHHHHHHHHHHcch--HHHHc
Confidence                     123457899999999999999999999987763222  12222233344455544555443322  11112


Q ss_pred             cCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHH
Q 015504          302 RFPH--SQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFI  379 (405)
Q Consensus       302 ~~~~--~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~  379 (405)
                      .+|+  ....|..+...|+++..++|.- .+-+|-++|.+-.+..+-....-.++++.+++|.-+..-|-|-++|+.|-.
T Consensus       245 ~~~~l~a~~Fw~~mtLsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~  323 (347)
T KOG1442|consen  245 GFPHLPAIKFWILMTLSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSL  323 (347)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhH
Confidence            2333  2456777777777765554332 244678899988887777777788899999999999999999999999999


Q ss_pred             HhhcCchhhhhHH
Q 015504          380 IANLSDKFSAKIE  392 (405)
Q Consensus       380 l~~~~~~~~~~~~  392 (405)
                      .+.+-+....++.
T Consensus       324 ~YT~vk~~em~~~  336 (347)
T KOG1442|consen  324 AYTLVKEHEMRKA  336 (347)
T ss_pred             HHHHHHHHHHHhh
Confidence            9888655444443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.94  E-value=3.6e-07  Score=87.97  Aligned_cols=240  Identities=13%  Similarity=0.064  Sum_probs=147.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHH-hhhhHHHHHHHHHHhccccc-------hHHHHHHHHHhhhceE
Q 015504          142 WAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVL-TSTSGLFTLFFGALLGQDSI-------TIAKLVAVFISMAGVA  213 (405)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l-~~~~pv~~~ils~l~~~er~-------~~~~~~~i~l~~~Gv~  213 (405)
                      .+.+..+++++.+|..+|..++.++++..++.+.-+ ..++-++..++..++++|-.       ...-.+|+++.++|++
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            356677888999999999999999999999999988 46889999999999987643       2357789999999999


Q ss_pred             EEEecCCCccccccccccccccchhhHHHHHHHHHHHHHHH-------HHHHhhcCCCCCcchHHHHHHH---HHHHHHH
Q 015504          214 MTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFT-------VLLKKSAGSEGDKVDVQKFFGY---IGLFTFL  283 (405)
Q Consensus       214 ll~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~-------v~~k~~~~~~~~~~~~~~~~~~---~~~~~~~  283 (405)
                      +.+..+...+.+...++....+...|.+++++|.+.|+.|.       ...+.......+..........   .|.+..-
T Consensus       150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n  229 (345)
T PRK13499        150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITN  229 (345)
T ss_pred             HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHH
Confidence            99884332211110000123457899999999999999999       4443321111111111111111   1211111


Q ss_pred             HHHHHHHHHhhcCCC--CCccCCCc----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHH----HHhhchHHHHHH
Q 015504          284 GLWWLIWPLNAAGIE--PPFRFPHS----QSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVAT----LGMSLTMPLAMV  353 (405)
Q Consensus       284 ~~~~~~~~~~~~~~e--~~~~~~~~----~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~s----v~~~l~~~~a~i  353 (405)
                      +.++.  .....+-+  ...+....    ......-+..|++ ..+++.++..+....+...+.    +.+.+...++.+
T Consensus       230 ~~~~~--~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl  306 (345)
T PRK13499        230 LGFCF--IRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL  306 (345)
T ss_pred             HHHHH--HHHhhCCCcccchhccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence            11111  00001101  00111111    1122222444544 777888888887776543332    333555667999


Q ss_pred             HHHHHcCCCcc------HHHHHHHHHHHHHHHHhhcCc
Q 015504          354 ADMVIHGRHYS------AIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       354 ~~~i~~ge~~~------~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      .+.+ +||.=+      ...++|.+++++|..+..+..
T Consensus       307 wGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        307 WGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             hhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            9994 888755      677999999999999887653

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.91  E-value=8.6e-09  Score=82.93  Aligned_cols=136  Identities=12%  Similarity=0.088  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeeheecchhhHHHHHHHHHHHHHHhhhhhhhcccccCCCcccCCCCCCCC
Q 015504            8 GLGLIGAFVLIWITSAEITQKIFTEYRQPFALTYLGVSLMVIYLPVALLRDCFCSLLDKNIFKNLFGNRSLTSTSTGLDI   87 (405)
Q Consensus         8 g~~~~l~~~i~w~~~~~l~q~i~~~~~~P~~~t~~~~~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (405)
                      -.+.-++++..|+.....+|.-.+ ...|-+-|.+|+....+++......       ..+.. .                
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~-------~g~~~-~----------------   58 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLV-------TGNWQ-A----------------   58 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHh-------cCcee-c----------------
Confidence            356778899999888888876555 4678888999988877776432221       11100 0                


Q ss_pred             cccccccccchhhhhhcccccCcCcCccccCCcccccCCCCCcchhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015504           88 PLKSNELNNSLETDLRSSLMMDKDLSEREEGWPLIAKSDKDEPHVLEQRSELSSWAIAKCSLYLTPIWFITEYFSNSALA  167 (405)
Q Consensus        88 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~  167 (405)
                                           ..                           ..+.|.+. ...+.|+.-.+++++||.|++
T Consensus        59 ---------------------~~---------------------------~~~~k~~l-flilSGla~glswl~Yf~ALk   89 (140)
T COG2510          59 ---------------------GG---------------------------EIGPKSWL-FLILSGLAGGLSWLLYFRALK   89 (140)
T ss_pred             ---------------------cc---------------------------ccCcceeh-hhhHHHHHHHHHHHHHHHHHh
Confidence                                 00                           01111122 223334455567889999999


Q ss_pred             ccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 015504          168 NTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTV  217 (405)
Q Consensus       168 ~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~  217 (405)
                      .-.++.+.-+..++|+++.++++++++||++..+++|+++..+|+++++.
T Consensus        90 ~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          90 KGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             cCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999874

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.90  E-value=3.1e-08  Score=89.64  Aligned_cols=241  Identities=13%  Similarity=0.164  Sum_probs=160.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 015504          139 LSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVG  218 (405)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~  218 (405)
                      .++|...+++++..    .+.-+-+-++.|.+-.+..+.-++-.+-+++-+.++-++|-.+....+..+..+|+++....
T Consensus       104 iP~rtY~~la~~t~----gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLA  179 (367)
T KOG1582|consen  104 IPWRTYVILAFLTV----GTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLA  179 (367)
T ss_pred             cchhHhhhhHhhhh----hccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhc
Confidence            34555555554432    22233357888888888888888888888899999999999999999999999999999987


Q ss_pred             CCCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 015504          219 KTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIE  298 (405)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  298 (405)
                      |...         .++-+..|+.+.-.+-++-|+-..+.+|..+.++.. ++-+.+ +.-.++++.+..   ++..+| |
T Consensus       180 Ds~~---------sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~s-s~Emvf-ySy~iG~vflf~---~mvlTg-e  244 (367)
T KOG1582|consen  180 DSQT---------SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPAS-SSEMVF-YSYGIGFVFLFA---PMVLTG-E  244 (367)
T ss_pred             cccc---------CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCC-cceEEE-eeecccHHHHHH---HHHhcc-c
Confidence            7632         234467899998888888998888888877644322 111111 111111111110   111121 1


Q ss_pred             C--C--ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 015504          299 P--P--FRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQV  374 (405)
Q Consensus       299 ~--~--~~~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI  374 (405)
                      -  .  +-..+....+...++.+. .+.++.......++.-++..++......--++++++++++..++|.+..-|..+|
T Consensus       245 ~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv  323 (367)
T KOG1582|consen  245 LFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLV  323 (367)
T ss_pred             chhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHH
Confidence            0  0  111222223444443333 2455555666677888888888888888999999999999999999999999999


Q ss_pred             HHHHHHhhcCchhhhhHHHHhhhhh
Q 015504          375 FAGFIIANLSDKFSAKIELLQMKLL  399 (405)
Q Consensus       375 ~~g~~l~~~~~~~~~~~~~~~~~~~  399 (405)
                      +.|+++-.++++.+........|..
T Consensus       324 ~lgI~Ln~ysk~nk~~~~~~~~r~~  348 (367)
T KOG1582|consen  324 VLGIYLNMYSKRNKIPLASLIRRIV  348 (367)
T ss_pred             HHHHHhhcccCCCCCchhhHHhhhh
Confidence            9999998887754444444444433

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.86  E-value=1.7e-09  Score=89.02  Aligned_cols=72  Identities=14%  Similarity=0.118  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 015504          145 AKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTT  216 (405)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~  216 (405)
                      ......+++...+++.+++.|+++++++.++.+.++.|+++.++++++++|++++.+++|+++++.|++++.
T Consensus        54 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   54 LWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            333444444456788899999999999999999999999999999999999999999999999999988753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.83  E-value=8.1e-09  Score=93.68  Aligned_cols=240  Identities=15%  Similarity=0.132  Sum_probs=148.6

Q ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 015504          137 SELSSWAIAKCSLYLTPIWFITEYFSNSALAN-TSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMT  215 (405)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll  215 (405)
                      ++.+.|+..+...    ++|..|.+-++++++ .+...-.++.+.+++-+++++++++|+|-+.+|..++++..+|+++.
T Consensus        60 ~kiplk~Y~i~V~----mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIc  135 (330)
T KOG1583|consen   60 PKIPLKDYAITVA----MFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIIC  135 (330)
T ss_pred             CCCchhhhheehh----eeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeE
Confidence            4666776555443    345566677888887 47777778889999999999999999999999999999999999998


Q ss_pred             EecCCCcccc---cc---ccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHH---HH
Q 015504          216 TVGKTWAADE---FL---SASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLG---LW  286 (405)
Q Consensus       216 ~~~~~~~~~~---~~---~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  286 (405)
                      .+.+..+..+   +.   +...+.....+|+.+...+.+.-|.-.+..+...+++..-.  .-.+.+.=++.+..   +.
T Consensus       136 Tl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~--~EalFytH~LsLP~Flf~~  213 (330)
T KOG1583|consen  136 TLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHW--KEALFYTHFLSLPLFLFMG  213 (330)
T ss_pred             EeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh--HHHHHHHHHhccchHHHhc
Confidence            8654322111   10   01112223567877776666666655544444333321111  11111111211111   00


Q ss_pred             -HHHHHHh-hcCCCCCccCCC----chhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcC
Q 015504          287 -WLIWPLN-AAGIEPPFRFPH----SQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHG  360 (405)
Q Consensus       287 -~~~~~~~-~~~~e~~~~~~~----~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~g  360 (405)
                       ++..-+. ....|+ ...|.    -+..|..++.+.+. ...|.-..+..-..+++.++++...+.--++.+++.+.+.
T Consensus       214 ~div~~~~~~~~se~-~~~p~~g~~vP~~~~yLl~n~L~-Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~  291 (330)
T KOG1583|consen  214 DDIVSHWRLAFKSES-YLIPLLGFKVPSMWVYLLFNVLT-QYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFE  291 (330)
T ss_pred             chHHHHHHHHhcCcc-eeccccCccccHHHHHHHHHHHH-HHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEec
Confidence             0000000 111221 22222    23456666555442 3333333444445677888888888888899999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHhhcC
Q 015504          361 RHYSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       361 e~~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                      .++++..++|+++++.|-++..-.
T Consensus       292 Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  292 NPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998887653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.77  E-value=1.3e-08  Score=83.03  Aligned_cols=64  Identities=17%  Similarity=0.217  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 015504          156 FITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKT  220 (405)
Q Consensus       156 ~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~  220 (405)
                      ..++.++++|+++.+ +.++.+.+++|+++.+++++++|||++++++++++++++|++++..++.
T Consensus        46 ~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   46 GVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            367889999999999 5888999999999999999999999999999999999999999998765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.68  E-value=7.5e-07  Score=84.57  Aligned_cols=134  Identities=15%  Similarity=0.002  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHHHH
Q 015504          240 DIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGFV  319 (405)
Q Consensus       240 ~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g~~  319 (405)
                      .++.++++++||...++.|+..++++ .  ....+.   ....+++.|.... ...  +  ..++.....++..+..+.+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~---~~~~~~l~~~~~~-~~~--~--~~~~~~~~~~~~~~~~~~~   71 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWAL---LAHSVLLTPYGLW-YLA--Q--VGWSRLPATFWLLLAISAV   71 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHH---HHHHHHHHHHHHH-hcc--c--CCCCCcchhhHHHHHHHHH
Confidence            46889999999999999998877422 1  222222   2222233332211 100  1  1122112223333444445


Q ss_pred             HHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcC
Q 015504          320 GSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       320 ~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                      +....+.+++.+.++.++..+++..+..|+++++++++++||+++..+++|.++++.|+++...+
T Consensus        72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            67888999999999999999999999998899999999999999999999999999999987754

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00803 nst UDP-galactose transporter

Probab=98.64  E-value=1.3e-06  Score=79.94  Aligned_cols=193  Identities=13%  Similarity=0.100  Sum_probs=110.4

Q ss_pred             hhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceE--------------------EEEecCCCcccccccccc
Q 015504          172 ASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVA--------------------MTTVGKTWAADEFLSASE  231 (405)
Q Consensus       172 ~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~--------------------ll~~~~~~~~~~~~~~~~  231 (405)
                      .......+..++++++.++.+.++|.+..|+++.++...|++                    ....++..+      ...
T Consensus         5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~------~~~   78 (222)
T TIGR00803         5 PIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA------KTL   78 (222)
T ss_pred             cchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc------ccc
Confidence            334444555555555555555555555555555555555554                    333222110      001


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--Ccc--CCCch
Q 015504          232 SRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEP--PFR--FPHSQ  307 (405)
Q Consensus       232 ~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~--~~~~~  307 (405)
                      ..++...|....+.+..+-++-.++.++..++.+..... ..+.. .+++.+....   .....+.+.  .+.  .....
T Consensus        79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~-~~~~l-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  153 (222)
T TIGR00803        79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWS-RNLQL-PLFGLFSTFS---VLLWSDGTLISNFGFFIGYPT  153 (222)
T ss_pred             ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHH-HHHHH-HHHHHHHHHH---HHhhcccchhhccCcccCCch
Confidence            123466787778888888788888888876643221111 11111 1111111100   111111110  001  11122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHH
Q 015504          308 SVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFII  380 (405)
Q Consensus       308 ~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l  380 (405)
                      ..|..+     +...++..+....+|+.++...++...+++.++.+++++++|++++..+++|+.+++.|+++
T Consensus       154 ~~~~~~-----~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       154 AVWIVG-----LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHH-----HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            223222     22455566788999999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.63  E-value=4.1e-07  Score=85.10  Aligned_cols=67  Identities=15%  Similarity=0.197  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceE
Q 015504          147 CSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVA  213 (405)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~  213 (405)
                      ....+.+...+++.+|+.++++++++.++.+.++.|++++++++++++|+++..+++|+++.+.|+.
T Consensus       194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            3334444456688899999999999999999999999999999999999999999999999999863

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.62  E-value=1.7e-06  Score=71.85  Aligned_cols=122  Identities=20%  Similarity=0.179  Sum_probs=89.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHH
Q 015504          238 TGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNG  317 (405)
Q Consensus       238 ~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g  317 (405)
                      .|.++.+++.++-+...++.|+-.++..+ .+....    .. ..+        ...  .        ++   ...++.|
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~----~~-~~~--------~~~--~--------~p---~~~i~lg   54 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD----FI-AAL--------LAF--G--------LA---LRAVLLG   54 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH----HH-HHH--------HHH--h--------cc---HHHHHHH
Confidence            47888999999999999999987764322 111110    00 000        000  0        01   1246677


Q ss_pred             HHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHH--HcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          318 FVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMV--IHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       318 ~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i--~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      +++.++++.+|..++++.+...+....++.+.+..+.++.  ++||++++.+++|.++|++|+++.+++++
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            8889999999999999999999998888876667777774  89999999999999999999999987654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.60  E-value=1.9e-06  Score=82.22  Aligned_cols=233  Identities=14%  Similarity=0.152  Sum_probs=130.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCc
Q 015504          143 AIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWA  222 (405)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~  222 (405)
                      ..++.++.   ++.+++.+.+.|+.+.|++..+-+.+...++.++++..++|||+++..+.|+++++.|..++...+..+
T Consensus        51 ~~W~~G~~---~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~  127 (300)
T PF05653_consen   51 PLWWIGLL---LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKE  127 (300)
T ss_pred             HHHHHHHH---HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence            44555544   345577778999999999999999999999999999999999999999999999999999887544322


Q ss_pred             cccc-cccc-c-ccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHH--HHHHHHHhhcCC
Q 015504          223 ADEF-LSAS-E-SRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGL--WWLIWPLNAAGI  297 (405)
Q Consensus       223 ~~~~-~~~~-~-~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  297 (405)
                      .+.. .+.- . ..+...+....... .+...+.....+|..+++ ..... ..-+..|.++.+..  .-...-....| 
T Consensus       128 ~~~~t~~~l~~~~~~~~fl~y~~~~~-~~~~~L~~~~~~r~g~~~-i~vyi-~i~sl~Gs~tvl~~K~i~~~i~~~~~g-  203 (300)
T PF05653_consen  128 EPIHTLDELIALLSQPGFLVYFILVL-VLILILIFFIKPRYGRRN-ILVYI-SICSLIGSFTVLSAKAISILIKLTFSG-  203 (300)
T ss_pred             CCcCCHHHHHHHhcCcceehhHHHHH-HHHHHHHHhhcchhcccc-eEEEE-EEeccccchhhhHHHHHHHHHHHHhcC-
Confidence            1110 0000 0 00001111111111 122222222222322211 11000 00001111111100  00000111112 


Q ss_pred             CCCccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHH-HHHHHHHHHcCCC--ccH----HHHHH
Q 015504          298 EPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMP-LAMVADMVIHGRH--YSA----IYIFG  370 (405)
Q Consensus       298 e~~~~~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~-~a~i~~~i~~ge~--~~~----~~iiG  370 (405)
                      +  ..+. .+..|..++.. +.+........++++++-+++.+....+..-- .+.+.+.++++|.  ++.    ....|
T Consensus       204 ~--~~f~-~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G  279 (300)
T PF05653_consen  204 D--NQFT-YPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCG  279 (300)
T ss_pred             c--hhhh-hhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHH
Confidence            1  1222 23345443333 44566777888899999998877655554433 4888888899874  444    55678


Q ss_pred             HHHHHHHHHHhhcCch
Q 015504          371 CLQVFAGFIIANLSDK  386 (405)
Q Consensus       371 ~~lI~~g~~l~~~~~~  386 (405)
                      +.+++.|+++....+.
T Consensus       280 ~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  280 FLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHhhheeeccCc
Confidence            8899999999876543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.55  E-value=3.3e-07  Score=80.84  Aligned_cols=230  Identities=15%  Similarity=0.131  Sum_probs=157.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 015504          140 SSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGK  219 (405)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~  219 (405)
                      ..++++..+++.....+-    -..+++|.++...++.-++..+.++....++++.|++-....+-++.+..-+.-.++|
T Consensus        67 ~aK~WfpiSfLLv~MIyt----~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D  142 (309)
T COG5070          67 KAKKWFPISFLLVVMIYT----SSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGD  142 (309)
T ss_pred             hhhhhcCHHHHHHHHHHh----cccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccch
Confidence            345566666655444332    2589999999999999999999999999999999999999999888887777766665


Q ss_pred             CCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 015504          220 TWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEP  299 (405)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~  299 (405)
                      .++...      .......|.+|+...++.-+.|....|+..+-. ..-+ .-.+.+--++++.++...-  +.+-+|.+
T Consensus       143 ~q~~~~------~~~~lN~GY~Wm~~NclssaafVL~mrkri~lt-Nf~d-~dtmfYnNllslPiL~~~s--~~~edws~  212 (309)
T COG5070         143 QQASAF------KAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLT-NFKD-FDTMFYNNLLSLPILLSFS--FLFEDWSP  212 (309)
T ss_pred             hhHHHH------HhcccCCceEEEehhhHhHHHHHHHHHHhhccc-ccch-hhHHHHhhhHHHHHHHHHH--HHhccCCc
Confidence            432111      112456799999999999999999998876521 1111 1123333444444332111  11222222


Q ss_pred             C---ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHH
Q 015504          300 P---FRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFA  376 (405)
Q Consensus       300 ~---~~~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~  376 (405)
                      .   ..++.  ....++...|+. ++.-.++-.|.++-++++.-|+...+.-.-.++.|.+++||+.+...+....+=.+
T Consensus       213 ~n~annl~~--d~l~am~ISgl~-svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfl  289 (309)
T COG5070         213 GNLANNLSV--DSLMAMFISGLC-SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFL  289 (309)
T ss_pred             chhhcCCCh--HHHHHHHHHHHH-HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHH
Confidence            0   01222  233445556664 44444667788999999999999998877778899999999999999998888777


Q ss_pred             HHHHhhcCch
Q 015504          377 GFIIANLSDK  386 (405)
Q Consensus       377 g~~l~~~~~~  386 (405)
                      +-+++.....
T Consensus       290 sg~iYavaks  299 (309)
T COG5070         290 SGAIYAVAKS  299 (309)
T ss_pred             HHHHHHHHHH
Confidence            7777766543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.50  E-value=2.5e-08  Score=89.17  Aligned_cols=223  Identities=13%  Similarity=0.128  Sum_probs=158.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhh-hhHHHHHHHHHHhccccchHHH----HHHHHHhhhceE
Q 015504          139 LSSWAIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTS-TSGLFTLFFGALLGQDSITIAK----LVAVFISMAGVA  213 (405)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~-~~pv~~~ils~l~~~er~~~~~----~~~i~l~~~Gv~  213 (405)
                      ....+.+..+++.+.+|.++|..++.|.++.+++.+.-+++ .+-+-+-+++++.++|..+..+    .+++++.++|++
T Consensus        53 ~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~  132 (288)
T COG4975          53 ELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIY  132 (288)
T ss_pred             ccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhhe
Confidence            34567788899999999999999999999999999999965 5777889999999999887654    458889999999


Q ss_pred             EEEecCCCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q 015504          214 MTTVGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLN  293 (405)
Q Consensus       214 ll~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (405)
                      +-++.|..+.+++     +.++...|....+.+.+.|-.|.++.+...-+   ..+.........+++.+       .+.
T Consensus       133 lTs~~~~~nk~~~-----~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~---g~saiLPqAiGMv~~al-------i~~  197 (288)
T COG4975         133 LTSKQDRNNKEEE-----NPSNLKKGIVILLISTLGYVGYVVLFQLFDVD---GLSAILPQAIGMVIGAL-------ILG  197 (288)
T ss_pred             Eeeeecccccccc-----ChHhhhhheeeeeeeccceeeeEeeecccccc---chhhhhHHHHHHHHHHH-------HHh
Confidence            9998775433322     34556789999999999999999998876531   22222222221122222       123


Q ss_pred             hcCCCCCccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHH----HH
Q 015504          294 AAGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIY----IF  369 (405)
Q Consensus       294 ~~~~e~~~~~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~----ii  369 (405)
                      ..+.|    .+.+...|. -+.-|++ +.+++..+..+.++.+-.+.=..+-+..+++.+.+.++++|+=|..+    ++
T Consensus       198 ~~~~~----~~~~K~t~~-nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~i  271 (288)
T COG4975         198 FFKME----KRFNKYTWL-NIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVII  271 (288)
T ss_pred             hcccc----cchHHHHHH-HHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhh
Confidence            33333    233344443 4555665 78888888888887775444334455577899999999999877754    56


Q ss_pred             HHHHHHHHHHHhh
Q 015504          370 GCLQVFAGFIIAN  382 (405)
Q Consensus       370 G~~lI~~g~~l~~  382 (405)
                      |.++++.|..+..
T Consensus       272 Giilivvgai~lg  284 (288)
T COG4975         272 GIILIVVGAILLG  284 (288)
T ss_pred             hHHHHHHHhhhhh
Confidence            8888888876654

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.46  E-value=1.6e-06  Score=84.97  Aligned_cols=65  Identities=15%  Similarity=0.186  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 015504          156 FITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKT  220 (405)
Q Consensus       156 ~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~  220 (405)
                      .++.++|++++++.+++.+++..++.|+++.++++++++|+++..+++|.++.+.|++++..+..
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            35777899999999999999999999999999999999999999999999999999999876543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.43  E-value=6.8e-06  Score=78.63  Aligned_cols=140  Identities=12%  Similarity=0.106  Sum_probs=94.4

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc-CCCchhHHHHH
Q 015504          235 HNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFR-FPHSQSVGEVL  313 (405)
Q Consensus       235 ~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~~~~i  313 (405)
                      +...|++++++++++|+...+..|.. .+ -+...   ...+-.+++.+++.+....  ..+... .. ...+...+. .
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~---~~~~R~~~a~~~l~~~~~~--~~~~~~-~~~~~~~~~~~~-~   75 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADE---ILTHRVIWSFFFMVVLMSI--CRQWSY-LKTLIQTPQKIF-M   75 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHH---HHHHHHHHHHHHHHHHHHH--HccHHH-HHHHHcCHHHHH-H
Confidence            35689999999999999999999764 32 22222   2222222222222221111  000000 00 001122222 2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhc
Q 015504          314 LLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL  383 (405)
Q Consensus       314 l~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~  383 (405)
                      ...+.++..+.+.+++++++++++..+++..++.|++.+++++++++|+++..+++|.++.+.|+++...
T Consensus        76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            3345556778899999999999999999999999889999999999999999999999999999988753

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.37  E-value=1.2e-06  Score=70.98  Aligned_cols=69  Identities=10%  Similarity=0.027  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 015504          148 SLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTT  216 (405)
Q Consensus       148 ~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~  216 (405)
                      ...+..++.++.+++..+++..|.+.+-.+.++.++++.+++++++|||++..+++|+.+.++|++++.
T Consensus        40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            333345677788899999999999999999999999999999999999999999999999999998875

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.34  E-value=6.6e-06  Score=78.61  Aligned_cols=65  Identities=14%  Similarity=0.078  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 015504          154 IWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVG  218 (405)
Q Consensus       154 ~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~  218 (405)
                      .-.++..+|+.++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|++.....
T Consensus       218 ~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        218 STALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            34557778999999999999999999999999999999999999999999999999999887543

>TIGR00688 rarD rarD protein

Probab=98.28  E-value=3.9e-05  Score=71.71  Aligned_cols=138  Identities=14%  Similarity=0.125  Sum_probs=92.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCC---CCccCCCchhHHHHHH
Q 015504          238 TGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIE---PPFRFPHSQSVGEVLL  314 (405)
Q Consensus       238 ~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e---~~~~~~~~~~~~~~il  314 (405)
                      .|..++++++++|+...+..|.. .+ -+..+....-   .+++.+++.+....  .....   +....+.....+..+.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R---~~~a~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   74 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHR---MIWSFPFMLLSVTL--FRQWAALIERLKRIQKRPLILSLL   74 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHH---HHHHHHHHHHHHHH--HcchHHHHHHHhCcccchHHHHHH
Confidence            48899999999999999999973 32 2222222222   22222222211111  11000   0011111112233344


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhc
Q 015504          315 LNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL  383 (405)
Q Consensus       315 ~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~  383 (405)
                      ..|++ ..++..+++.+++++++..+++..++.|.+++++++++++|+++..+++|.++.++|+.+...
T Consensus        75 ~~g~~-~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        75 LCGLL-IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHH-HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            55554 678899999999999999999999998889999999999999999999999999999887654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.26  E-value=1.1e-05  Score=77.05  Aligned_cols=66  Identities=11%  Similarity=0.034  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 015504          153 PIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVG  218 (405)
Q Consensus       153 ~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~  218 (405)
                      +.-.+++++|+.++++.+++.++.+.+..|++..++++++++|+++..+++|.++.+.|+++....
T Consensus       223 ~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        223 AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            345668999999999999999999999999999999999999999999999999999999887543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.22  E-value=1.9e-05  Score=75.67  Aligned_cols=77  Identities=16%  Similarity=0.089  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 015504          143 AIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGK  219 (405)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~  219 (405)
                      .+......+.+.-.++.++|+.++++.++++++.+..+.|++..++++++++|+++..+++|.++.++|+++...+.
T Consensus       213 ~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        213 TILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            33333344444455678889999999999999999999999999999999999999999999999999998876543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.18  E-value=9.4e-06  Score=77.50  Aligned_cols=71  Identities=17%  Similarity=0.143  Sum_probs=61.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 015504          148 SLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVG  218 (405)
Q Consensus       148 ~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~  218 (405)
                      ...+.+.-.++..+|+.++++.+++.++.+..+.|++++++++++++|+++..+++|.++.+.|++++...
T Consensus       216 ~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        216 GYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            33333334567889999999999999999999999999999999999999999999999999999887543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.15  E-value=2e-05  Score=64.04  Aligned_cols=76  Identities=16%  Similarity=0.218  Sum_probs=65.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          310 GEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       310 ~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      +...+..|+++...++.++..+.++.++ .+++...+.|++++++++++++|+++..+++|.+++++|+++..+++.
T Consensus        34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   34 WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            3345555666666899999999999995 777888898999999999999999999999999999999999988754

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.08  E-value=4.3e-05  Score=61.85  Aligned_cols=68  Identities=16%  Similarity=0.124  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhc
Q 015504          316 NGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL  383 (405)
Q Consensus       316 ~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~  383 (405)
                      .++++.++++.++..++++.+...+....++.+..+++.+++++||+++..+++|.+++++|+++...
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            34466788999999999999999998888888888999999999999999999999999999988653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.97  E-value=0.00018  Score=61.40  Aligned_cols=73  Identities=14%  Similarity=0.202  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 015504          143 AIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMT  215 (405)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll  215 (405)
                      +.....+..+++.++.|+..+..++++++.+.+++...-.+.+.++++++++|+++..++.|++++++|+++-
T Consensus        79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            4555566667788889999999999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.91  E-value=8.7e-05  Score=69.50  Aligned_cols=228  Identities=9%  Similarity=0.100  Sum_probs=127.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCc
Q 015504          143 AIAKCSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGKTWA  222 (405)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~~~~  222 (405)
                      .+++.+++   .+.++...-|.|..+.|++..+-+.+++.++.++++..+++||++..-.+|.+++++|-.++..+...+
T Consensus        65 ~~Ww~G~l---tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   65 PLWWAGML---TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HHHHHHHH---HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            45555554   345566777899999999999999999999999999999999999999999999999999998765432


Q ss_pred             cccccccc--cc-cccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHH---HHH--HHHHHHHHhh
Q 015504          223 ADEFLSAS--ES-RRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFT---FLG--LWWLIWPLNA  294 (405)
Q Consensus       223 ~~~~~~~~--~~-~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~  294 (405)
                      .+-....+  .. .+...+.....++..+  .+-...+|   +++. ...+......+++++   .+-  ..-..+-..+
T Consensus       142 ~~i~t~~el~~~~~~~~Fliy~~~iil~~--~il~~~~~---p~~g-~tnilvyi~i~s~iGS~tV~svKalg~aiklt~  215 (335)
T KOG2922|consen  142 QEIESVEEVWELATEPGFLVYVIIIILIV--LILIFFYA---PRYG-QTNILVYIGICSLIGSLTVMSVKALGIAIKLTF  215 (335)
T ss_pred             cccccHHHHHHHhcCccHHHHHHHHHHHH--HHHheeec---cccc-ccceeehhhHhhhhcceeeeeHHHHHHHHHHHh
Confidence            21100000  00 0001111111111111  11111112   1111 111111112222211   100  0001111222


Q ss_pred             cCCCCCccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhch-HHHHHHHHHHHcCCC--ccH----HH
Q 015504          295 AGIEPPFRFPHSQSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLT-MPLAMVADMVIHGRH--YSA----IY  367 (405)
Q Consensus       295 ~~~e~~~~~~~~~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~-~~~a~i~~~i~~ge~--~~~----~~  367 (405)
                      .|.   .++.. +..|..++.. +.+...-..-.++|.+.-++..++...+.. .-++++.+.+++.|-  .+.    ..
T Consensus       216 ~g~---~ql~~-~~ty~~~l~~-~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~  290 (335)
T KOG2922|consen  216 SGN---NQLFY-PLTWIFLLVV-ATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGE  290 (335)
T ss_pred             cCC---ccccc-HHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence            221   22221 2334433333 234455566678899988877776655543 345778888888763  333    56


Q ss_pred             HHHHHHHHHHHHHhhcC
Q 015504          368 IFGCLQVFAGFIIANLS  384 (405)
Q Consensus       368 iiG~~lI~~g~~l~~~~  384 (405)
                      +.|+..++.|+.++...
T Consensus       291 ~~Gf~ti~~G~flL~~~  307 (335)
T KOG2922|consen  291 LCGFVTIFLGIFLLHRT  307 (335)
T ss_pred             HHhHHHhhheeeEeeee
Confidence            78899999999998553

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.83  E-value=6.3e-05  Score=62.49  Aligned_cols=72  Identities=17%  Similarity=0.086  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHH--hccccchHHHHHHHHHhhhceEEEEecC
Q 015504          148 SLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGAL--LGQDSITIAKLVAVFISMAGVAMTTVGK  219 (405)
Q Consensus       148 ~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l--~~~er~~~~~~~~i~l~~~Gv~ll~~~~  219 (405)
                      ...+..++.++.+++..+++..+++.+..+.+..++++.+.++.  +++|+++..+++|+++.++|++++..++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            34445577889999999999999999999999999999888885  7999999999999999999999987543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.79  E-value=0.00013  Score=59.52  Aligned_cols=71  Identities=18%  Similarity=0.194  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHhhchHHH-HHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchhh
Q 015504          318 FVGSVLSDYFWALSVVWTTPLVA-TLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFS  388 (405)
Q Consensus       318 ~~~t~l~~~l~~~~~~~~~~~~~-sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~~  388 (405)
                      +++.+++++++..++|..+-..+ ++...+.....++.+++++||++++.+++|..+|++|++..+..++.+
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~  108 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA  108 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence            44567899999999999886665 555567777889999999999999999999999999999998766433

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.79  E-value=0.00098  Score=63.88  Aligned_cols=76  Identities=12%  Similarity=0.135  Sum_probs=68.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhc
Q 015504          307 QSVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL  383 (405)
Q Consensus       307 ~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~  383 (405)
                      ...|..++..|++ ..+.+.+.+.+++++++..+++..+++|++.+++++++++|+++..+++|.+++++|+.+...
T Consensus        62 ~~~~~~~~~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~  137 (302)
T TIGR00817        62 SALLKLLLPVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASD  137 (302)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcC
Confidence            4467777778877 477789999999999999999999999999999999999999999999999999999987654

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.72  E-value=0.0016  Score=63.84  Aligned_cols=76  Identities=7%  Similarity=0.060  Sum_probs=66.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcC
Q 015504          308 SVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       308 ~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                      ..|..++..|++... .+...+.+++++++..+.+..+++|++.+++++++++|+++..+++|.+++++|+.+....
T Consensus       112 ~~~~~llp~gl~~~~-~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~  187 (350)
T PTZ00343        112 LFLKNFLPQGLCHLF-VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK  187 (350)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc
Confidence            356667777876543 4666779999999999999999999999999999999999999999999999999998754

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.71  E-value=0.00085  Score=64.80  Aligned_cols=145  Identities=18%  Similarity=0.222  Sum_probs=93.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHH
Q 015504          236 NITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLL  315 (405)
Q Consensus       236 ~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~  315 (405)
                      .+.+.+++-+.+++-+.-.+....+.++....-..+.++.+.. +.++. .|..  ..-.+.++....  ....|+.-+.
T Consensus        11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~-l~~vy-~~~~--~~r~~~~~~~~~--~~~~~w~y~l   84 (334)
T PF06027_consen   11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVL-LALVY-TPIL--LYRRGFKKWLKV--LKRPWWKYFL   84 (334)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHH-HHHHH-hhhh--hhccccccchhh--cchhHHHHHH
Confidence            4555566666666666665555555543211112233444422 22221 1111  111121211111  1223444455


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchh
Q 015504          316 NGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKF  387 (405)
Q Consensus       316 ~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~  387 (405)
                      .+++ -+.++++.+.|.++|+-+.+.+.....+|++++++++++++++++.+++|+++.++|+.++...+..
T Consensus        85 la~~-Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   85 LALL-DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHH-HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            5665 6899999999999999999999999999999999999999999999999999999999998887643

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.67  E-value=0.001  Score=63.48  Aligned_cols=132  Identities=17%  Similarity=0.178  Sum_probs=89.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHHH
Q 015504          239 GDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGF  318 (405)
Q Consensus       239 G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g~  318 (405)
                      |.+++++++++|+...+..|+..+     .+..+..+.  .++..+...   ...... .+..   .....+..-+..|+
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~g-----~~~~~~~~~--~~g~l~~~~---~~~~~~-~~~~---~~~~~~~~g~l~G~   67 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIGG-----GPYSQTLGT--TFGALILSI---AIAIFV-LPEF---WALSIFLVGLLSGA   67 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccCC-----CHHHHHHHH--HHHHHHHHH---HHHHHh-CCcc---cccHHHHHHHHHHH
Confidence            678999999999999999998752     222333321  111111100   011111 1111   11333443444444


Q ss_pred             HHHHHHHHHHHHHHHhhchHHHHHHhh-chHHHHHHHHHHHcCCCccHHH----HHHHHHHHHHHHHhhcCc
Q 015504          319 VGSVLSDYFWALSVVWTTPLVATLGMS-LTMPLAMVADMVIHGRHYSAIY----IFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       319 ~~t~l~~~l~~~~~~~~~~~~~sv~~~-l~~~~a~i~~~i~~ge~~~~~~----iiG~~lI~~g~~l~~~~~  385 (405)
                      + ..+++.+++.++++++...+....+ +.+.++.+++.+++||+.+..+    ++|.++++.|+++....+
T Consensus        68 ~-w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        68 F-WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             H-HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            3 7889999999999999988877666 6555799999999999999999    999999999999986653

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.65  E-value=0.0029  Score=59.52  Aligned_cols=143  Identities=23%  Similarity=0.176  Sum_probs=96.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHH
Q 015504          236 NITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLL  315 (405)
Q Consensus       236 ~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~  315 (405)
                      ...+....++.++.|+......|..... .  .........-........    .+....+..  ...+... .+.....
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~-~~~~~~~   74 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES-L--DPFLFAAALRFLIAALLL----LPLLLLEPR--GLRPALR-PWLLLLL   74 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc-c--CChHHHHHHHHHHHHHHH----HHHHHhhcc--ccccccc-chHHHHH
Confidence            4578888889999999999999988763 1  111111111111111111    011111110  0111111 1333455


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHH-HHcCCCccHHHHHHHHHHHHHHHHhhcCchhh
Q 015504          316 NGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADM-VIHGRHYSAIYIFGCLQVFAGFIIANLSDKFS  388 (405)
Q Consensus       316 ~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~-i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~~  388 (405)
                      .+.+.....+.+++.+++++++..+++..+..|.+..++++ ++++|+++..++.|..+.+.|+++...++...
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~  148 (292)
T COG0697          75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG  148 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence            55666888999999999999999999999999999999996 77799999999999999999999999876643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.63  E-value=0.00098  Score=61.89  Aligned_cols=141  Identities=15%  Similarity=0.163  Sum_probs=97.3

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHH
Q 015504          236 NITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLL  315 (405)
Q Consensus       236 ~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~  315 (405)
                      ...|+++++.+-+.|+.--.+.|-..+-  +..++   +..=-++++.++.....+.  .++....+.-.+++.+.....
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~~--~~~eI---lahRviwS~~~~l~ll~~~--r~~~~~~~~~~~p~~~~~~~l   77 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLEPL--PATEI---LAHRVIWSFPFMLALLFLL--RQWRELKQLLKQPKTLLMLAL   77 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHccC--CHHHH---HHHHHHHHHHHHHHHHHHH--hhhHHHHHHHhCcHHHHHHHH
Confidence            4579999999999999988888876552  22221   1111122222211111111  111111223334555666666


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcC
Q 015504          316 NGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       316 ~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                      .++. -......+.++...-....+|++-++.|.+.+++|.++++|+++..|+++.++..+|+....+.
T Consensus        78 ~a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          78 TALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            6654 4677889999999999999999999999999999999999999999999999999999886654

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.60  E-value=0.00048  Score=55.49  Aligned_cols=68  Identities=16%  Similarity=0.238  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHHHhhchHHH-HHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCc
Q 015504          318 FVGSVLSDYFWALSVVWTTPLVA-TLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       318 ~~~t~l~~~l~~~~~~~~~~~~~-sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      +++.+++++++..++++.+-..+ ++..-+.....++.+++++||++++.+++|..+|+.|++..+..+
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44567889999999999886655 555667788889999999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.56  E-value=0.00072  Score=53.48  Aligned_cols=66  Identities=23%  Similarity=0.273  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHhhchHHH-HHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCc
Q 015504          320 GSVLSDYFWALSVVWTTPLVA-TLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       320 ~t~l~~~l~~~~~~~~~~~~~-sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      +..++|.+...++|..+-..+ ++..-......++.+++++||+++..+++|..++++|++..+..+
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            457789999999999886555 777778788899999999999999999999999999999988754

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.49  E-value=0.00091  Score=53.34  Aligned_cols=68  Identities=18%  Similarity=0.129  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHHhhchHHH-HHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCc
Q 015504          318 FVGSVLSDYFWALSVVWTTPLVA-TLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       318 ~~~t~l~~~l~~~~~~~~~~~~~-sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      +++..+++++...++|..+...+ ++..-+......+.+++++||++++.+++|..+++.|++..+..+
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~~  104 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLST  104 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhccC
Confidence            34567899999999999886555 777778888899999999999999999999999999999987643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.38  E-value=0.0016  Score=52.25  Aligned_cols=65  Identities=15%  Similarity=0.172  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHhhchHHH-HHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhc
Q 015504          319 VGSVLSDYFWALSVVWTTPLVA-TLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANL  383 (405)
Q Consensus       319 ~~t~l~~~l~~~~~~~~~~~~~-sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~  383 (405)
                      ++..+++++...++|+.+...+ ++..-+......+.+++++||++++.+++|..+|+.|++..+.
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lkl  108 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIKL  108 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            3467899999999999886665 6777777888999999999999999999999999999998753

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.29  E-value=0.0032  Score=60.91  Aligned_cols=148  Identities=16%  Similarity=0.200  Sum_probs=93.5

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCCCccCCCchhHHHHH
Q 015504          235 HNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIW-PLNAAGIEPPFRFPHSQSVGEVL  313 (405)
Q Consensus       235 ~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~i  313 (405)
                      +...|+++.+++++||+.+.+-.||... -  ..+..+.  ..+++..++ .|... .+...++..... ..+...+...
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~k~-w--~wE~~W~--v~gi~~wl~-~~~~~g~~~~~~f~~~~~-~~~~~~~~~~   76 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKVKK-W--SWETMWS--VGGIFSWLI-LPWLIAALLLPDFWAYYS-SFSGSTLLPV   76 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccccCC-C--chhHHHH--HHHHHHHHH-HHHHHHHHHhhhHHHHHH-hcCHHHHHHH
Confidence            3678999999999999999999998432 1  2222222  223333222 12110 110000000011 1224456566


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchHHH-HHHhhchHHHHHHHHHHHcCCCc-------cHHHHHHHHHHHHHHHHhhcCc
Q 015504          314 LLNGFVGSVLSDYFWALSVVWTTPLVA-TLGMSLTMPLAMVADMVIHGRHY-------SAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       314 l~~g~~~t~l~~~l~~~~~~~~~~~~~-sv~~~l~~~~a~i~~~i~~ge~~-------~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      +..|++ ..++...+..++|+.+-+.+ .+..-++.+++.+++.+++||-.       ....++|.+++++|+++..+..
T Consensus        77 ~l~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag  155 (345)
T PRK13499         77 FLFGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG  155 (345)
T ss_pred             HHHHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            666765 88999999999999996665 44445667778899999998643       3468899999999999999954


Q ss_pred             hhhhh
Q 015504          386 KFSAK  390 (405)
Q Consensus       386 ~~~~~  390 (405)
                      +.++|
T Consensus       156 ~~k~~  160 (345)
T PRK13499        156 QLKER  160 (345)
T ss_pred             hhccc
Confidence            44443

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.15  E-value=0.0013  Score=53.79  Aligned_cols=69  Identities=19%  Similarity=0.300  Sum_probs=60.1

Q ss_pred             HHHHHHHHHHHHHHHhhccchhhHHHHh-hhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 015504          151 LTPIWFITEYFSNSALANTSVASTTVLT-STSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGK  219 (405)
Q Consensus       151 ~~~~~~~~~~~~~~al~~~s~~~~~~l~-~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~  219 (405)
                      ...++.++.+++..++++.+.+.+=.+. ....+.+.++++++++|+++..+++|+.+.++|++++-..+
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            3446667888889999999999887774 68999999999999999999999999999999999886543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.07  E-value=0.0018  Score=52.19  Aligned_cols=67  Identities=7%  Similarity=0.114  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHH-hhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 015504          152 TPIWFITEYFSNSALANTSVASTTVL-TSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVG  218 (405)
Q Consensus       152 ~~~~~~~~~~~~~al~~~s~~~~~~l-~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~  218 (405)
                      ..++.++.+++..+++..|.+.+=.+ .....+.+.++++++++|++++.+++|+.+.++|++++-..
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            44566677778899999999988777 55788999999999999999999999999999999998543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.06  E-value=0.015  Score=55.81  Aligned_cols=70  Identities=20%  Similarity=0.162  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchhhh
Q 015504          320 GSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSA  389 (405)
Q Consensus       320 ~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~~~  389 (405)
                      ...++..+.+.++++++...-.+.-+..++..++++++++|++.+..++++.+++.+|+++....+..++
T Consensus        73 ~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen   73 LFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             HHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            3677788899999999988888889999999999999999999999999999999999999988765333

; GO: 0055085 transmembrane transport

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.02  E-value=0.031  Score=47.01  Aligned_cols=132  Identities=16%  Similarity=0.116  Sum_probs=84.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHHH
Q 015504          239 GDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGF  318 (405)
Q Consensus       239 G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g~  318 (405)
                      ..++++++.++-+++..+..++.++..+...........|.....+.      ....+.++...++..  .|+.. ..|+
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~------~~~~~~~~~~~~~~~--p~w~~-lGG~   72 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLII------LLITGRPSLASLSSV--PWWAY-LGGL   72 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH------HHHhcccccchhccC--ChHHh-ccHH
Confidence            45788899999999999988887754434444444444444443322      111111111112222  23332 2555


Q ss_pred             HHHHHHHHHHHHHHHhhchHHHHHHhhchHHH-HHHHHHH----HcCCCccHHHHHHHHHHHHHHHH
Q 015504          319 VGSVLSDYFWALSVVWTTPLVATLGMSLTMPL-AMVADMV----IHGRHYSAIYIFGCLQVFAGFII  380 (405)
Q Consensus       319 ~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~-a~i~~~i----~~ge~~~~~~iiG~~lI~~g~~l  380 (405)
                      + .++...+....+.+.++..+.......-.+ +.++|.+    .-..+++..+++|.+++++|+++
T Consensus        73 l-G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   73 L-GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             H-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            5 455667777888999988887776666554 8999986    23578999999999999999864

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.95  E-value=0.0045  Score=59.17  Aligned_cols=120  Identities=15%  Similarity=0.127  Sum_probs=82.6

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHH
Q 015504          235 HNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLL  314 (405)
Q Consensus       235 ~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il  314 (405)
                      +..+|..++++++++.+....+.|+-..|.+. .....-   ...                     .+.-.++ .|+.  
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~---~~~---------------------~~~l~~~-~W~~--   55 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAG---SGG---------------------RSYLRRP-LWWI--   55 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccccc---chh---------------------hHHHhhH-HHHH--
Confidence            47899999999999999999999987553221 100000   000                     0000011 2322  


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcC
Q 015504          315 LNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       315 ~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                        |++..+++..+...+....+.+.++....+..+++++++..++||+++..+++|++++++|..+....
T Consensus        56 --G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   56 --GLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             --HHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence              12223444555666777778888888888989999999999999999999999999999998776543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.92  E-value=0.14  Score=49.01  Aligned_cols=236  Identities=12%  Similarity=0.142  Sum_probs=135.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhhHHHH-hhhhHHHHHHHHHHhcc-------ccchHHHHHHHHHhhhceEEEE
Q 015504          145 AKCSLYLTPIWFITEYFSNSALANTSVASTTVL-TSTSGLFTLFFGALLGQ-------DSITIAKLVAVFISMAGVAMTT  216 (405)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l-~~~~pv~~~ils~l~~~-------er~~~~~~~~i~l~~~Gv~ll~  216 (405)
                      +....+.+++|.++...|-.+++|+..+....+ ..+..++-.++--++.+       ++-....++|++++++|++++.
T Consensus        73 l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g  152 (344)
T PF06379_consen   73 LFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICG  152 (344)
T ss_pred             HHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHh
Confidence            344566688999999999999999998877665 45666666666444432       2334578899999999999998


Q ss_pred             ecCCCccccccccccccccchhhHHHHHHHHHHHHHHHHHHHhhcC-------CCCCcch---HHHHH-HHHHHHHHHHH
Q 015504          217 VGKTWAADEFLSASESRRHNITGDIFGLLSAITYGLFTVLLKKSAG-------SEGDKVD---VQKFF-GYIGLFTFLGL  285 (405)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~-------~~~~~~~---~~~~~-~~~~~~~~~~~  285 (405)
                      ..+...+.+ .+.+..+.+...|.+++++|.+..|.+..-...-.+       ...++..   +...+ ...|+.+- ..
T Consensus       153 ~AG~~Ke~~-~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN-~~  230 (344)
T PF06379_consen  153 KAGSMKEKE-LGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITN-LI  230 (344)
T ss_pred             HHHHhhhhh-hccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHH-HH
Confidence            765432211 111123345679999999999999988775532211       0011110   11111 12222221 12


Q ss_pred             HHHHHHHhhcCCC--CCccCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHhhchH--HH--HHHhhchHHHHHHHHHH
Q 015504          286 WWLIWPLNAAGIE--PPFRFPHS--QSVGEVLLLNGFVGSVLSDYFWALSVVWTTPL--VA--TLGMSLTMPLAMVADMV  357 (405)
Q Consensus       286 ~~~~~~~~~~~~e--~~~~~~~~--~~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~--~~--sv~~~l~~~~a~i~~~i  357 (405)
                      ++......--.+.  ..+.....  ...+......|++ ....+++|..+-.+.++.  ..  .+.+.+...++-+.+.+
T Consensus       231 yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~  309 (344)
T PF06379_consen  231 YCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI  309 (344)
T ss_pred             HHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH
Confidence            2221111000110  00111111  1233334444554 677777777777776643  33  34445555567788876


Q ss_pred             HcCC------CccHHHHHHHHHHHHHHHHhhcC
Q 015504          358 IHGR------HYSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       358 ~~ge------~~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                      . +|      +.-...++|+++++.++.++-+.
T Consensus       310 l-kEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  310 L-KEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             H-HHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            4 44      34456788999999998887664

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.90  E-value=0.0039  Score=50.03  Aligned_cols=64  Identities=14%  Similarity=0.080  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHH-hhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 015504          152 TPIWFITEYFSNSALANTSVASTTVL-TSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMT  215 (405)
Q Consensus       152 ~~~~~~~~~~~~~al~~~s~~~~~~l-~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll  215 (405)
                      ..++.++.++...++++.|.+.+=.+ ...-.+.+.+.++++++|++++.|++|+.+.+.|++++
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            44556677788899999999887666 45788999999999999999999999999999999875

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.84  E-value=0.0039  Score=49.33  Aligned_cols=64  Identities=22%  Similarity=0.261  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHhhccchhhHHHH-hhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 015504          154 IWFITEYFSNSALANTSVASTTVL-TSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTV  217 (405)
Q Consensus       154 ~~~~~~~~~~~al~~~s~~~~~~l-~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~  217 (405)
                      .+..+.++...++++.|.+.+=.+ ...-.+.+.+.++++++|+++..|++++.+.++|++.+-.
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            344556666789999998887655 5678899999999999999999999999999999987643

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.84  E-value=0.0055  Score=48.88  Aligned_cols=65  Identities=14%  Similarity=0.149  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHHh-hhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 015504          152 TPIWFITEYFSNSALANTSVASTTVLT-STSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTT  216 (405)
Q Consensus       152 ~~~~~~~~~~~~~al~~~s~~~~~~l~-~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~  216 (405)
                      ..++..+.++...+++..|.+.+=.+. ..-.+.+.+++++++||++++.+++|+.+.++|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            345566777788999999988876664 57889999999999999999999999999999999874

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=96.83  E-value=0.02  Score=54.73  Aligned_cols=155  Identities=19%  Similarity=0.247  Sum_probs=94.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-cCCCchhHHHHH
Q 015504          235 HNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPF-RFPHSQSVGEVL  313 (405)
Q Consensus       235 ~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~i  313 (405)
                      ....|+++..+++++.+.+.+=.||..+     .+...+-...++++.++..+....+...+..... +.|.  ..+...
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~-----WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~--~~l~~~   76 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVKG-----WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPA--STLFWT   76 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcCC-----ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCCh--hHHHHH
Confidence            3679999999999999999999998754     2232222223555554332221111111111001 1232  234445


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhchHH-HHHHhhchHHHHHHHHHHHcCC-------CccHHHHHHHHHHHHHHHHhhcCc
Q 015504          314 LLNGFVGSVLSDYFWALSVVWTTPLV-ATLGMSLTMPLAMVADMVIHGR-------HYSAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       314 l~~g~~~t~l~~~l~~~~~~~~~~~~-~sv~~~l~~~~a~i~~~i~~ge-------~~~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      ...|++ ..++-..|-.++|+.+-.. -++..-+...++.++--++.|+       +-....++|.++.++|+.+..+..
T Consensus        77 ~l~G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG  155 (344)
T PF06379_consen   77 FLFGVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG  155 (344)
T ss_pred             HHHHHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence            556665 8889999999999998443 3444445555555554444432       234578999999999999999987


Q ss_pred             hhhhhHHHHhhh
Q 015504          386 KFSAKIELLQMK  397 (405)
Q Consensus       386 ~~~~~~~~~~~~  397 (405)
                      ..|+|+...+.+
T Consensus       156 ~~Ke~~~~~~~~  167 (344)
T PF06379_consen  156 SMKEKELGEEAK  167 (344)
T ss_pred             Hhhhhhhccchh
Confidence            766655444433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.47  E-value=0.045  Score=51.08  Aligned_cols=68  Identities=15%  Similarity=0.252  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHH----HHHHhhhceEE
Q 015504          147 CSLYLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLV----AVFISMAGVAM  214 (405)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~----~i~l~~~Gv~l  214 (405)
                      ..++.|++|..+|++|+.+.+...++.+=.+.++.++...+-+.+++||+=+++++.    |+++.++|.++
T Consensus       197 ~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  197 KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            356778899999999999999999999999999999999999999999998877554    55555555543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.37  E-value=0.012  Score=45.95  Aligned_cols=54  Identities=15%  Similarity=0.188  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHhhccchhhHHH-HhhhhHHHHHHHHHHhccccchHHHHHHHHH
Q 015504          154 IWFITEYFSNSALANTSVASTTV-LTSTSGLFTLFFGALLGQDSITIAKLVAVFI  207 (405)
Q Consensus       154 ~~~~~~~~~~~al~~~s~~~~~~-l~~~~pv~~~ils~l~~~er~~~~~~~~i~l  207 (405)
                      ++..+.+++..++++.+.+.+=. ......+.+.+++.++++|+++..|++|+.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            56667788899999999999844 4568999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.28  E-value=0.037  Score=50.49  Aligned_cols=74  Identities=15%  Similarity=0.129  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 015504          143 AIAKCSLYLTPI-WFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTT  216 (405)
Q Consensus       143 ~~~~~~~~~~~~-~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~  216 (405)
                      .++..++..+++ -.+-+.+-+.++...+..+.+.+.++-|.+.++.++++++|++|..||+++...+++..=.+
T Consensus       207 ~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         207 SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence            445555444433 23344566799999999999999999999999999999999999999999988877766444

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.24  E-value=0.019  Score=46.24  Aligned_cols=64  Identities=20%  Similarity=0.224  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHHh-hhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 015504          152 TPIWFITEYFSNSALANTSVASTTVLT-STSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMT  215 (405)
Q Consensus       152 ~~~~~~~~~~~~~al~~~s~~~~~~l~-~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll  215 (405)
                      ..+...+...|++.+...+.+.+.-+. ++.=+||++.++++.+|..++++++|+++.+.|+.++
T Consensus        48 f~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   48 FLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            446677888999999999999999997 7789999999998888888999999999999999886

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.22  E-value=0.017  Score=45.04  Aligned_cols=56  Identities=23%  Similarity=0.191  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHHHHHHhhchHHH-HHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 015504          319 VGSVLSDYFWALSVVWTTPLVA-TLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQV  374 (405)
Q Consensus       319 ~~t~l~~~l~~~~~~~~~~~~~-sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI  374 (405)
                      .+..++++++..++|+.+...+ ++..-+......+.+++++||+++..+++|..+|
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3567889999999999887777 5556677888999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.70  E-value=0.045  Score=50.73  Aligned_cols=68  Identities=12%  Similarity=0.172  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchhh
Q 015504          321 SVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFS  388 (405)
Q Consensus       321 t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~~  388 (405)
                      ..+.+.+.+.++++.+|..-.+.....+++++++.+++++.+++..+|++..+++.|+.+.+.++...
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            56778889999999999999999999999999999999999999999999999999999999876544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.20  E-value=0.53  Score=39.89  Aligned_cols=140  Identities=16%  Similarity=0.085  Sum_probs=76.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHH
Q 015504          236 NITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLL  315 (405)
Q Consensus       236 ~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~  315 (405)
                      ..+..+.++++.++-.++.-+.-++.+...++......-..+|...+.....    . ..+.. .+.... ...|+.. .
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l----~-~~~~~-~~a~~~-~~pwW~~-~   74 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLL----I-KQGHP-GLAAVA-SAPWWAW-I   74 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHH----H-hcCCC-chhhcc-CCchHHH-H
Confidence            4567888899999999998888777764333333333333444444433211    1 11111 122111 1224332 2


Q ss_pred             HHHHHHHHHHHHHHHHHHhhchH-HHHHHhhchHHHHHHHHHHHcC----CCccHHHHHHHHHHHHHHHHhhcC
Q 015504          316 NGFVGSVLSDYFWALSVVWTTPL-VATLGMSLTMPLAMVADMVIHG----RHYSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       316 ~g~~~t~l~~~l~~~~~~~~~~~-~~sv~~~l~~~~a~i~~~i~~g----e~~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                      -|+++ ++.-+.-.....+.+++ +..+...=+...++++|.+=..    .+++...++|.+++++|+++....
T Consensus        75 GG~lG-a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          75 GGLLG-AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             ccchh-hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            33433 22222233344444543 3444444455668888876543    579999999999999996665543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=94.88  E-value=0.016  Score=53.27  Aligned_cols=138  Identities=11%  Similarity=0.099  Sum_probs=87.3

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHH
Q 015504          235 HNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLL  314 (405)
Q Consensus       235 ~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il  314 (405)
                      ...+|..+..++ ..+....++.++....++...+...... ..+.+..+      .....  .+ +.-|...+.|+  +
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l~-~mlit~pc------liy~~--~~-v~gp~g~R~~L--i  101 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLLV-RMLITYPC------LIYYM--QP-VIGPEGKRKWL--I  101 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhhh-ehhhhheE------EEEEe--ee-eecCCCcEEEE--E
Confidence            345677777777 6666667777777764433322222110 01111111      01111  10 21233344443  2


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          315 LNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       315 ~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      .=|+. ...+..+.+++.++.+-.-|+++...+|.+..+++|++++|++|....+|..+-+.|+++..+++-
T Consensus       102 LRg~m-G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  102 LRGFM-GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             eehhh-hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence            22333 233456667788888888899988998999999999999999999999999999999999988753

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=94.65  E-value=0.28  Score=41.21  Aligned_cols=54  Identities=15%  Similarity=0.252  Sum_probs=42.3

Q ss_pred             HHHHHhhccchhhHHHHhhh-hHHHHHHHHHH----hccccchHHHHHHHHHhhhceEE
Q 015504          161 FSNSALANTSVASTTVLTST-SGLFTLFFGAL----LGQDSITIAKLVAVFISMAGVAM  214 (405)
Q Consensus       161 ~~~~al~~~s~~~~~~l~~~-~pv~~~ils~l----~~~er~~~~~~~~i~l~~~Gv~l  214 (405)
                      +.....+..+++..+.+.-+ +.+...++..+    .-|+++++.|++|+++.++|+++
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            33678899999888888655 55666666664    35889999999999999999864

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.42  E-value=0.016  Score=52.55  Aligned_cols=133  Identities=10%  Similarity=0.004  Sum_probs=84.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHHH
Q 015504          239 GDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGF  318 (405)
Q Consensus       239 G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g~  318 (405)
                      +.+.+++=++.|+..-....|.-.+  +..+ ..-+...++...+.      .+.+...|      .+...+..-+..|.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG~--p~qQ-~lGtT~GALifaii------v~~~~~p~------~T~~~~iv~~isG~   67 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGGK--PYQQ-TLGTTLGALIFAII------VFLFVSPE------LTLTIFIVGFISGA   67 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCCC--hhHh-hhhccHHHHHHHHH------HheeecCc------cchhhHHHHHHhhh
Confidence            5688999999999987777766542  2111 11112211111111      11121111      12334444455565


Q ss_pred             HHHHHHHHHHHHHHHhhchHHHHHHhhc-hHHHHHHHHHHHcCCCccHHH----HHHHHHHHHHHHHhhcCchh
Q 015504          319 VGSVLSDYFWALSVVWTTPLVATLGMSL-TMPLAMVADMVIHGRHYSAIY----IFGCLQVFAGFIIANLSDKF  387 (405)
Q Consensus       319 ~~t~l~~~l~~~~~~~~~~~~~sv~~~l-~~~~a~i~~~i~~ge~~~~~~----iiG~~lI~~g~~l~~~~~~~  387 (405)
                      + +.++...++++++..+.+++....+= +.+-+.+++++.+||-.+..+    .++.++++.|+++..+.++.
T Consensus        68 ~-Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~  140 (288)
T COG4975          68 F-WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN  140 (288)
T ss_pred             H-hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence            4 78899999999999998888776554 344489999999999887744    34577888999998887653

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.12  E-value=0.08  Score=51.03  Aligned_cols=75  Identities=13%  Similarity=0.143  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchhh
Q 015504          313 LLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFS  388 (405)
Q Consensus       313 il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~~  388 (405)
                      .++.+.+ +.++.+.++.++.+++....++..+..-.+...++.++.+|++|..+.++..+-++|++++...+.++
T Consensus       162 sl~fc~l-WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  162 SLFFCPL-WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHH-HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            3444544 78899999999999999999999999999999999999999999999999999999999999875544

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=93.55  E-value=0.065  Score=47.01  Aligned_cols=65  Identities=11%  Similarity=0.307  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          322 VLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       322 ~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      ..+.++|..++++++|+.++....+.-.+..+++++.+|+++....++..++.+.|+++..+.+.
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            44688899999999999999999999999999999999999999999999999999999887654

>TIGR00803 nst UDP-galactose transporter

Probab=93.30  E-value=0.15  Score=46.43  Aligned_cols=57  Identities=7%  Similarity=0.065  Sum_probs=52.0

Q ss_pred             HHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEE
Q 015504          158 TEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAM  214 (405)
Q Consensus       158 ~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~l  214 (405)
                      .+.+....++|.++...++...+.++++.++++++++++++..++.|+.+.+.|+++
T Consensus       165 ~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       165 GGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             cCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            444557889999999999999999999999999999999999999999999999875

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=93.07  E-value=0.25  Score=39.85  Aligned_cols=61  Identities=13%  Similarity=0.090  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHHhhchHHHHHH-hhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHh
Q 015504          321 SVLSDYFWALSVVWTTPLVATLG-MSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIA  381 (405)
Q Consensus       321 t~l~~~l~~~~~~~~~~~~~sv~-~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~  381 (405)
                      +..+...|+..+.+.+-+.+... ++++-.++++.++++.+|..+...++|+++|+.|+.+.
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            45566777788888875555444 57888889999998888888999999999999998653

Many members are annotated as potential transmembrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=91.32  E-value=0.067  Score=50.58  Aligned_cols=129  Identities=16%  Similarity=0.197  Sum_probs=84.7

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHH
Q 015504          233 RRHNITGDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEV  312 (405)
Q Consensus       233 ~~~~~~G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  312 (405)
                      ..++..|.++++.+++..+...++.||-..|..             . .         ....  .|..+..-.. ..||.
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-------------~-~---------~~ra--~~gg~~yl~~-~~Ww~   69 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-------------A-S---------GLRA--GEGGYGYLKE-PLWWA   69 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-------------h-h---------cccc--cCCCcchhhh-HHHHH
Confidence            456789999999999999998888887665310             0 0         0011  0111221111 23433


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCchhhhhH
Q 015504          313 LLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDKFSAKI  391 (405)
Q Consensus       313 il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~~~~~~  391 (405)
                          |++...++-.+-+.+-...+++.++....+..+.+++++..+++|+++....+||.+.++|-.+...+..++++.
T Consensus        70 ----G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   70 ----GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             ----HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence                233334444444445555567778878888899999999999999999999999999999977776654434433

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=89.78  E-value=0.54  Score=43.69  Aligned_cols=128  Identities=14%  Similarity=0.025  Sum_probs=71.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccCCCchhHHHHHHHHHH
Q 015504          239 GDIFGLLSAITYGLFTVLLKKSAGSEGDKVDVQKFFGYIGLFTFLGLWWLIWPLNAAGIEPPFRFPHSQSVGEVLLLNGF  318 (405)
Q Consensus       239 G~~l~l~sa~~~a~y~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~il~~g~  318 (405)
                      |.+.+++|+++++...+=.||+...|  ..-.++++.....+...+      .....+.      |   ..+...+..|.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~gD--g~~fQw~~~~~i~~~g~~------v~~~~~~------p---~f~p~amlgG~   63 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDTGD--GFFFQWVMCSGIFLVGLV------VNLILGF------P---PFYPWAMLGGA   63 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccCCC--cHHHHHHHHHHHHHHHHH------HHHhcCC------C---cceeHHHhhhh
Confidence            66788999999999999999887643  344455555433322221      1112221      1   11222233333


Q ss_pred             HHHHHHHHHHHHHHHhhchHHH-HHHhhchHHHHHHHHHH-HcCCC-----ccHHHHHHHHHHHHHHHHhhcC
Q 015504          319 VGSVLSDYFWALSVVWTTPLVA-TLGMSLTMPLAMVADMV-IHGRH-----YSAIYIFGCLQVFAGFIIANLS  384 (405)
Q Consensus       319 ~~t~l~~~l~~~~~~~~~~~~~-sv~~~l~~~~a~i~~~i-~~ge~-----~~~~~iiG~~lI~~g~~l~~~~  384 (405)
                      + .+.+..+-.-.+|.++-... .+..+.....+...+-+ ++|++     -.+..++|.+++++|..+...-
T Consensus        64 l-W~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi  135 (254)
T PF07857_consen   64 L-WATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI  135 (254)
T ss_pred             h-hhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence            3 55566666666666663322 33334444445554432 44442     3568899999999998877653

The region concerned is approximately 280 residues long.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=89.55  E-value=17  Score=35.28  Aligned_cols=65  Identities=14%  Similarity=0.197  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCc
Q 015504          321 SVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       321 t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      ..+-+.+++.+..+.+|++-.+..-+.+.-++++.+++++++++..||...++..+|+.+++.+.
T Consensus       102 YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen  102 YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            44555688889999999999999999888899999999999999999999999999999999543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=85.17  E-value=1.5  Score=39.88  Aligned_cols=66  Identities=12%  Similarity=0.256  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 015504          152 TPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTV  217 (405)
Q Consensus       152 ~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~  217 (405)
                      ++.-.++|++.|.-+.+-++-+-+++..+--.|+.+.++++++..++.++|+|.++.+.|..+=..
T Consensus       248 ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  248 AIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            334456788888999999999999999999999999999999999999999999999999877443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=83.81  E-value=21  Score=34.03  Aligned_cols=66  Identities=17%  Similarity=0.276  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHHHHHHhhccchhhHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 015504          150 YLTPIWFITEYFSNSALANTSVASTTVLTSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMT  215 (405)
Q Consensus       150 ~~~~~~~~~~~~~~~al~~~s~~~~~~l~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll  215 (405)
                      .++.+-|+...+-+.=+..|++-+.++..----+.+.+++.++++++++...|.|..++..|+..=
T Consensus       248 l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  248 LGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            344444444445556667777776666666677889999999999999999999999999999875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=82.93  E-value=0.61  Score=44.75  Aligned_cols=73  Identities=21%  Similarity=0.271  Sum_probs=55.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHhhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHh
Q 015504          308 SVGEVLLLNGFVGSVLSDYFWALSVVWTTPLVATLGMSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIA  381 (405)
Q Consensus       308 ~~~~~il~~g~~~t~l~~~l~~~~~~~~~~~~~sv~~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~  381 (405)
                      ..|..++-.|++ ..++..+-+.+.++.+-...-..-.++||+..++++++.+|+.+...+.-.+.++.|+.+.
T Consensus        81 ~~~~~llpl~~~-~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ia  153 (316)
T KOG1441|consen   81 LPLRTLLPLGLV-FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIA  153 (316)
T ss_pred             cchHHHHHHHHH-HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEe
Confidence            456667777775 6778888899999999999999999999999999999999987664443333333333333

>PRK02237 hypothetical protein; Provisional

Probab=81.62  E-value=11  Score=29.88  Aligned_cols=39  Identities=10%  Similarity=0.129  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          348 MPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       348 ~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      +..+.++.+.+-|.+|+...++|..+.++|+.+..+.+|
T Consensus        70 I~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         70 VAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            667889999999999999999999999999988876554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	405
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.82
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.34
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.24
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.19

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.82  E-value=5.2e-09  Score=86.60  Aligned_cols=71  Identities=17%  Similarity=0.209  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHH-hhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCch
Q 015504          316 NGFVGSVLSDYFWALSVVWTTPLVATLG-MSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSDK  386 (405)
Q Consensus       316 ~g~~~t~l~~~l~~~~~~~~~~~~~sv~-~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~~  386 (405)
                      .+++++++++++|..++++.++..+... ..+.|+++++++++++||++++.+++|+++|++|+++.+..++
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~  106 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            4566789999999999999999999877 7898999999999999999999999999999999999987654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.34  E-value=2.4e-06  Score=68.00  Aligned_cols=70  Identities=17%  Similarity=0.199  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhchHHHHHH-hhchHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHhhcCc
Q 015504          316 NGFVGSVLSDYFWALSVVWTTPLVATLG-MSLTMPLAMVADMVIHGRHYSAIYIFGCLQVFAGFIIANLSD  385 (405)
Q Consensus       316 ~g~~~t~l~~~l~~~~~~~~~~~~~sv~-~~l~~~~a~i~~~i~~ge~~~~~~iiG~~lI~~g~~l~~~~~  385 (405)
                      .++++.+++++++..++|+.+...+... ..+.+.++++.+++++||+++..+++|..+|++|+++.+..+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4456688999999999999999999766 788888999999999999999999999999999999998754

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.24  E-value=1.7e-06  Score=68.85  Aligned_cols=71  Identities=7%  Similarity=0.096  Sum_probs=63.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHH-hhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 015504          149 LYLTPIWFITEYFSNSALANTSVASTTVL-TSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGK  219 (405)
Q Consensus       149 ~~~~~~~~~~~~~~~~al~~~s~~~~~~l-~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~  219 (405)
                      +.+..++.++.+++..++++.+.+.+-.+ .++.|+++.++++++++|+++..+++|+.+.++|++++...+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34455677788899999999999999888 799999999999999999999999999999999999987643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.19  E-value=8.2e-07  Score=73.35  Aligned_cols=71  Identities=7%  Similarity=0.096  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhhHHHH-hhhhHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 015504          149 LYLTPIWFITEYFSNSALANTSVASTTVL-TSTSGLFTLFFGALLGQDSITIAKLVAVFISMAGVAMTTVGK  219 (405)
Q Consensus       149 ~~~~~~~~~~~~~~~~al~~~s~~~~~~l-~~~~pv~~~ils~l~~~er~~~~~~~~i~l~~~Gv~ll~~~~  219 (405)
                      +.+.+.+.++.++++.++++.+++.+..+ .++.|+++.++++++++|++++.+++|+++.++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44455677788999999999999999888 899999999999999999999999999999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00