Citrus Sinensis ID: 015529

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
Protein Sequence
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWISLIYS
Secondary Structure (PSIPRED)
cccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccEEEEEEEEEEEcccEEEEccccccccccccccccEEEEEEEEEccccccEEEEEEEEEEcccccEEEEEEEEEEEEcccEEEEEEEEEEcccEEEEEEEEEcccccEEEEEEEEEEccccEEEEcccccccccccccccccccccEEEEccccEEEEEEEEEEccccccccccccccEEcEEEEEEEEcccccccEEEEEEEEEcccccccEEEEEEccccEEEEcccEEEEEEEEEccccccccEEEEEEEccccccEEEEEccEEEEcccccccccEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEcccccEEEEEEEEEEEEccccEEEcccccccccccccccccccEEEEEEEHHcccEEEEEEEEEEcccccEEEEEEEEEEEEccccEEEEEEEcccccEEEEEEEEEcccccEEEEEEEEccccccEEEEcccccccccccccccccccccccEEccccEEEEEEEEEcccccccccccccccEEEEEEEEEEEccccccccEEcccccccccccccEEEEEEEcccEEEEEccEEEEEEEEEccccccccEEEEEEcccccccEEEEEcccEEEEcccccccccEEEEEEEEEc
Coil and Loop (DISEMBL)
msstpgthsLAFRVMRlcrpslhvepplrvdptdlfigedifddpiaasnlpplissdvttnkssdltyRSRFLLhdsadsiglsgllvlpqafgaiylgeTFCSYISinnsstlevRDVVIKAEIQTDKQRILLLdtskspvesiraggrydfIVEHDVKELGAHTLVCTAlysdgegerkyLPQFFKFIvsnplsvrtKVRVVKEITFLEACIENhtksnlymdqvefepsqnwsatmlkadgphsdynaqsreifkppvlirsgggiHNYLYQLKmlshgssspvkvqgsnvlgklqitwrtnlgepgrlqtQQILGTTITSKEIElnvvevpsvvgidkpfllklkltnqtdkeqgpfeiwlsqndsdeekVVMINGLRIMVTQFGWLIETIFMWISLIYS
Flexible Loop (DISEMBL)
msstpgthslAFRVMRLCrpslhvepplrvDPTDLFIGEDIFDDPIAasnlpplissdvttnksSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAeiqtdkqrillldtskspvesiRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFivsnplsvrtKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWrtnlgepgrlqtQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLtnqtdkeqgpfeiwlsqndsdEEKVVMINGLRIMVTQFGWLIETIFMWISLIYS
Low Complexity Region (SEG)
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRlqtqqilgttitSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWISLIYS
Disordered region (IsUnstruct)
*********LAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLIS*********DLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEF*************************EIFKPPVLIRSGGGIHNYLYQLKMLSHG****VKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN*********EIW****************************************
Disordered Region (DISOPRED)
******T**LAFRVMRLCRPSLHVEPPLRVDPTDLFIG******************************************SIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTD*********************RYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSAT**********************VLIRSGGGIHNYLYQL****************NVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWISLIYS
Disordered Region (DISEMBL)
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSH********QGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWISLIYS
Disordered Region (DISPRO)
*****GTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGE**************************************SADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKA***********REIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWISLIYS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWISLIYS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	405	2.2.26 [Sep-21-2011]
Q6PBY7	412	UPF0533 protein C5orf44 h	yes	no	0.775	0.762	0.352	3e-49
Q5RCG0	417	UPF0533 protein C5orf44 h	yes	no	0.772	0.750	0.341	1e-48
A5PLN9	417	UPF0533 protein C5orf44 O	yes	no	0.782	0.760	0.342	2e-48
Q3TIR1	417	UPF0533 protein C5orf44 h	yes	no	0.782	0.760	0.342	1e-47
Q6GPR5	414	UPF0533 protein C5orf44 h	N/A	no	0.775	0.758	0.351	1e-47
Q5M887	418	UPF0533 protein C5orf44 h	yes	no	0.772	0.748	0.346	2e-47
A7MB76	417	UPF0533 protein C5orf44 h	yes	no	0.782	0.760	0.339	2e-47
Q0VFT9	412	UPF0533 protein C5orf44 h	yes	no	0.775	0.762	0.350	7e-47
Q55EX6	511	UPF0533 protein OS=Dictyo	yes	no	0.879	0.696	0.301	4e-42
A8WX89	401	UPF0533 protein CBG04321	N/A	no	0.765	0.773	0.315	2e-41

>sp|Q6PBY7|CE044_DANRE UPF0533 protein C5orf44 homolog OS=Danio rerio GN=zgc:73187 PE=2 SV=2

 Score =  196 bits (498), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/357 (35%), Positives = 189/357 (52%), Gaps = 43/357 (12%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF+                L+  D +T K
Sbjct: 10  HLLALKVMRLTKPTLFTNMPVTCEDRDLPGDLFLR---------------LMKDDPSTVK 54

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                          A+++ L  +L LPQ FG I+LGETF SYIS++N S+  V+D+++K
Sbjct: 55  G--------------AETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S S V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKLY 159

Query: 184 LPQFFKFIVSNPLSVRTKV-RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLK 242
             +FFKF V  PL V+TK      +  FLEA I+N T S ++M++V  EPS  ++ T L 
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSMMYNVTELN 219

Query: 243 --ADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQ 300
             A G  S  +   +  +  P+  R       YLY LK     +     ++G  V+GKL 
Sbjct: 220 NVASGDESSESTFGKMSYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKLD 273

Query: 301 ITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
           I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN +++
Sbjct: 274 IVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEFIPDTVDLEEPFDITCKITNCSER 330

Danio rerio (taxid: 7955)

>sp|Q5RCG0|CE044_PONAB UPF0533 protein C5orf44 homolog OS=Pongo abelii PE=2 SV=1

 Score =  194 bits (492), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 185/363 (50%), Gaps = 50/363 (13%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVD----PTDLFIGEDIFDDPIAASNLPPLISSDVTTNK 63
           H LA +VMRL +P+L    P+  +    P DLF  + + DDP                  
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEERDLPGDLF-NQLMRDDPSTV--------------- 53

Query: 64  SSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
                        + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++K
Sbjct: 54  -------------NGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVK 100

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
           A++QT  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y
Sbjct: 101 ADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMY 159

Query: 184 LPQFFKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNW 236
             +FFKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  +
Sbjct: 160 FRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMY 219

Query: 237 SATMLKA--DGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSN 294
           + T L +      S     SR   +P            YLY LK     +     ++G  
Sbjct: 220 NVTELNSVSQAGESVSTFGSRAYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVT 272

Query: 295 VLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQ 354
           V+GKL I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN 
Sbjct: 273 VIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNC 332

Query: 355 TDK 357
           +++
Sbjct: 333 SER 335

Pongo abelii (taxid: 9601)

>sp|A5PLN9|CE044_HUMAN UPF0533 protein C5orf44 OS=Homo sapiens GN=C5orf44 PE=2 SV=2

 Score =  193 bits (491), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 42/359 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T      
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMRDDPST------ 52

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                    + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++Q
Sbjct: 53  --------VNGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           FKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  ++ T 
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMYNVTE 223

Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
           L +     +  +   SR   +P            YLY LK  +  +     ++G  V+GK
Sbjct: 224 LNSVSQAGECVSTFGSRAYLQP-------MDTRQYLYCLKPKNEFAEKAGIIKGVTVIGK 276

Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
           L I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN +++
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSER 335

Homo sapiens (taxid: 9606)

>sp|Q3TIR1|CE044_MOUSE UPF0533 protein C5orf44 homolog OS=Mus musculus PE=2 SV=1

 Score =  190 bits (483), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 188/359 (52%), Gaps = 42/359 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T      
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPST------ 52

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                    + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++Q
Sbjct: 53  --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           FKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  ++ T 
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTE 223

Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
           L +     +  +   SR   +P            YLY LK     +     ++G  V+GK
Sbjct: 224 LNSVTQAGECISTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276

Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
           L I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN +++
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSER 335

Mus musculus (taxid: 10090)

>sp|Q6GPR5|CE044_XENLA UPF0533 protein C5orf44 homolog OS=Xenopus laevis PE=2 SV=2

 Score =  190 bits (483), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 184/350 (52%), Gaps = 36/350 (10%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F           L+  D +T K +++
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFS---------TLMKDDPSTVKGAEI 58

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                         + L  +L LPQ FG I+LGETF SYIS++N S   V+DV +KA++Q
Sbjct: 59  --------------LMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDVQVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASSAVVADLKPDSCIDDVIHHEVKEIGTHILVCAVSYTIQSGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTKV-RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
           FKF V  PL V+TK      +  FLEA I+N T S ++M++V  EPS  ++ + L     
Sbjct: 164 FKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVSELNTVIT 223

Query: 247 HSDYNAQSR---EIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITW 303
           + D+   S    + +  P+  R       YLY LK     +     ++G  V+GKL I W
Sbjct: 224 NGDWKGSSTFGTKTYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKLDIVW 277

Query: 304 RTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN 353
           +TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN
Sbjct: 278 KTNLGERGRLQTSQLQRMAPGYGDVRLSIETIPDTVRLEEPFDITCKITN 327

Xenopus laevis (taxid: 8355)

>sp|Q5M887|CE044_RAT UPF0533 protein C5orf44 homolog OS=Rattus norvegicus PE=2 SV=2

 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 185/355 (52%), Gaps = 42/355 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T      
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMKDDPST------ 52

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                    + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++Q
Sbjct: 53  --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           FKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  ++ T 
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTE 223

Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
           L +     +  +   SR   +P            YLY LK     +     ++G  V+GK
Sbjct: 224 LNSVNQAGECVSTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276

Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN 353
           L I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITN 331

Rattus norvegicus (taxid: 10116)

>sp|A7MB76|CE044_BOVIN UPF0533 protein C5orf44 homolog OS=Bos taurus PE=2 SV=1

 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/359 (33%), Positives = 186/359 (51%), Gaps = 42/359 (11%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F+          L+  D +T      
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEEKDL--PGDLFNQ---------LMRDDPST------ 52

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                    + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++Q
Sbjct: 53  --------VNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQSGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           FKF V  PL V+TK       +  V +  FLEA I+N T S ++M++V  EPS  ++   
Sbjct: 164 FKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVAE 223

Query: 241 LKADGPHSDYNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
           L +     +      SR   +P            YLY LK     +     ++G  V+GK
Sbjct: 224 LNSVNQAGECVTTFGSRAYLQP-------MDTRQYLYCLKPKKEFAEKAGIIKGVTVIGK 276

Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
           L I W+TNLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN +++
Sbjct: 277 LDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSER 335

Bos taurus (taxid: 9913)

>sp|Q0VFT9|CE044_XENTR UPF0533 protein C5orf44 homolog OS=Xenopus tropicalis PE=2 SV=1

 Score =  188 bits (477), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/348 (35%), Positives = 183/348 (52%), Gaps = 34/348 (9%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           H LA +VMRL +P+L    P+  +  DL    D+F           L+  D +T K    
Sbjct: 10  HLLALKVMRLTKPTLFTNIPVTCEERDL--PGDLFS---------TLMKDDPSTVKG--- 55

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
                      A+++ L  +L LPQ FG I+LGETF SYIS++N S   V+D+ +KA++Q
Sbjct: 56  -----------AETLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDIQVKADLQ 104

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T  QR L L  S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +F
Sbjct: 105 TSSQR-LNLSASTAVVSELKPDSCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKMYFRKF 163

Query: 188 FKFIVSNPLSVRTKV-RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
           FKF V  PL V+TK      +  FLEA I+N T S ++M++V  EPS  ++ + L     
Sbjct: 164 FKFQVLKPLDVKTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVSELNTVIT 223

Query: 247 HSD-YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRT 305
           + D  +    + +  P+  R       YLY LK     +     ++G  V+GKL I W+T
Sbjct: 224 NGDGCSTFGTKTYLQPLDTR------QYLYCLKPKPEFAEKAGVIKGVTVIGKLDIVWKT 277

Query: 306 NLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTN 353
           NLGE GRLQT Q+        ++ L++  +P  V +++PF +  K+TN
Sbjct: 278 NLGERGRLQTSQLQRMAPGYGDVRLSIETIPDTVRLEEPFDITCKITN 325

Xenopus tropicalis (taxid: 8364)

>sp|Q55EX6|U533_DICDI UPF0533 protein OS=Dictyostelium discoideum GN=DDB_G0269062 PE=3 SV=2

 Score =  172 bits (436), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 208/408 (50%), Gaps = 52/408 (12%)

Query: 7   THSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSD 66
            H L  +VMRL +P++    P+  +  DL    +     I +++L       V ++ S+D
Sbjct: 4   NHLLNLKVMRLSKPNIPTINPILCEKQDL--PYETMSTSIDSTSLS---MGSVNSSGSND 58

Query: 67  LTYRSRFLLHDSADSIGLSGLLV---LPQAFGAIYLGETFCSYISINNSSTLEVRDVVIK 123
               +  L+ ++ + I + GL V   L    G IYLGE FC YIS+NN S  +VR+V +K
Sbjct: 59  ----NNQLIGNNGNPINMEGLGVTSMLQLQSGVIYLGEMFCCYISLNNHSPYQVRNVFLK 114

Query: 124 AEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKY 183
            E+QT   RI LLD+ +  V +   G   DF+V+ +VKE G + LVC   Y+  EGE+K 
Sbjct: 115 VELQTTSSRIPLLDSEQQSVPTFNPGFSSDFVVQREVKESGVNILVCAVNYTTPEGEQKK 174

Query: 184 LPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKA 243
             ++FKF V NPL ++T++  +  + FLEAC+EN T+ +L+++ + FEP +++++  +  
Sbjct: 175 FRKYFKFQVLNPLVLKTRIHNLPNVVFLEACLENATQGSLFIESILFEPIEHFNSKDISF 234

Query: 244 DGPHSDYNA----------------------------QSREIFKPPVLIRSG-------G 268
           +    D N                              + E+ +   L  S        G
Sbjct: 235 ENSLDDNNNLDNNNNNLENDNNLNNLEFKLNEKGLIENTDELLENIKLTTSDNIVFLKQG 294

Query: 269 GIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEI 328
               YL+Q   ++      V+ + S  LG+L ITWR+  GE GRL+T  I    +  ++I
Sbjct: 295 CSRQYLFQ---ITPKDIENVESKNSLPLGRLDITWRSYFGEIGRLKTAAI-QRKLNQEDI 350

Query: 329 ELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKV 376
           E +++ +P  + ++KPF +  KL+N++++   P +  L +N  D  K+
Sbjct: 351 ECSLINIPDKIKLEKPFSVIAKLSNKSNRILYP-QFMLVRNKMDGIKI 397

Dictyostelium discoideum (taxid: 44689)

>sp|A8WX89|U533_CAEBR UPF0533 protein CBG04321 OS=Caenorhabditis briggsae GN=CBG04321 PE=3 SV=2

 Score =  170 bits (430), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 187/368 (50%), Gaps = 58/368 (15%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           +S++     LA RVMRL RP        +  P D F       DP+  +    L++  V 
Sbjct: 5   ISNSSTQQLLALRVMRLARP--------KFAPLDGFS-----HDPVDPTGFGELLAGKV- 50

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
               ++++  SR   HD    + +   L+ PQ F  IYLGETF  Y+++ N S   V +V
Sbjct: 51  ----AEISKESR---HD----LPIGEYLIAPQMFENIYLGETFTFYVNVVNESESNVVNV 99

Query: 121 VIKAEIQTDKQRILL-LDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
            +K E+QT  QR++L        +ES +  G+   ++ H+VKE+G H L+C+  Y    G
Sbjct: 100 SLKCELQTSTQRVVLPCSVQDVTIESTKCDGQ---VISHEVKEIGQHILICSVNYKTLSG 156

Query: 180 ERKYLPQFFKFIVSNPLSVRTKVRVVKEIT----FLEACIENHTKSNLYMDQVEFEPSQN 235
           E  Y  +FFKF VS P+ V+TK    ++      +LEA IEN + SN+++++VE +PSQ+
Sbjct: 157 ENMYFRKFFKFPVSKPIDVKTKFYSAEDNANQDVYLEAQIENTSNSNMFLERVELDPSQH 216

Query: 236 WSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGS-- 293
           +  T +     H D   +  ++ KP         I  +L+ L        SPV V  +  
Sbjct: 217 YKVTSIS----HEDEFPEVGKLLKP-------KDIRQFLFCL--------SPVDVNNTLG 257

Query: 294 ----NVLGKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKL 349
                 +GKL ++WRT++GE GRLQT  +        ++ L+V + P+ V + KPF +  
Sbjct: 258 YKDLTSIGKLDMSWRTSMGEKGRLQTSALQRIAPGYGDVRLSVEKTPACVDVQKPFEVAC 317

Query: 350 KLTNQTDK 357
           +L N +++
Sbjct: 318 RLYNCSER 325

Caenorhabditis briggsae (taxid: 6238)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
225470348	438	PREDICTED: UPF0533 protein C5orf44 [Viti	0.950	0.878	0.769	1e-175
255556003	434	expressed protein, putative [Ricinus com	0.935	0.873	0.766	1e-175
449457717	440	PREDICTED: UPF0533 protein C5orf44-like	0.953	0.877	0.733	1e-171
356548745	440	PREDICTED: UPF0533 protein C5orf44 homol	0.928	0.854	0.768	1e-170
224079249	450	predicted protein [Populus trichocarpa]	0.933	0.84	0.732	1e-164
358346667	446	hypothetical protein MTR_084s0010 [Medic	0.940	0.854	0.724	1e-164
356521339	435	PREDICTED: UPF0533 protein C5orf44-like	0.918	0.855	0.75	1e-163
388496064	437	unknown [Medicago truncatula]	0.916	0.848	0.738	1e-162
297824907	443	hypothetical protein ARALYDRAFT_483987 [	0.945	0.864	0.688	1e-151
18407493	442	uncharacterized protein [Arabidopsis tha	0.943	0.864	0.684	1e-150

>gi|225470348|ref|XP_002269604.1| PREDICTED: UPF0533 protein C5orf44 [Vitis vinifera] gi|296090651|emb|CBI41051.3| unnamed protein product [Vitis vinifera]

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 297/386 (76%), Positives = 341/386 (88%), Gaps = 1/386 (0%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MSS   +HSLAFRVMRLCRPS HV+ PLR+DP DL  GEDIFDDP+AAS+LP L+ +   
Sbjct: 1   MSSGQTSHSLAFRVMRLCRPSFHVDNPLRLDPADLLAGEDIFDDPLAASDLPRLLHNHTL 60

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
            +  SDLTYR+RFLL+D +D++GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVRDV
Sbjct: 61  KSNDSDLTYRTRFLLNDPSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVRDV 120

Query: 121 VIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGE 180
           VIKAEIQT+KQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC+ALY+DG+GE
Sbjct: 121 VIKAEIQTEKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCSALYNDGDGE 180

Query: 181 RKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           RKYLPQFFKF+V+NPLSV+TKVR+VK+ TFLEACIENHTKSNLYMDQVEFEPSQ+W+AT+
Sbjct: 181 RKYLPQFFKFVVANPLSVKTKVRIVKDNTFLEACIENHTKSNLYMDQVEFEPSQHWTATV 240

Query: 241 LKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQ 300
           LKA    SD ++ +REIFK P+LIRSGGGI NYLYQLK+ S GS+  +KV GSNVLGKLQ
Sbjct: 241 LKAGEGLSDNDSPTREIFKQPILIRSGGGIQNYLYQLKLSSQGSAQ-MKVDGSNVLGKLQ 299

Query: 301 ITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQG 360
           ITWRTNLGEPGRLQTQQILG+ IT KEIEL V+EVPSV  +++PFL+ L LTNQTD+  G
Sbjct: 300 ITWRTNLGEPGRLQTQQILGSPITRKEIELQVMEVPSVTILERPFLVHLNLTNQTDRTMG 359

Query: 361 PFEIWLSQNDSDEEKVVMINGLRIMV 386
           PFE+WLSQ+DS EE+VVM+NGLR M 
Sbjct: 360 PFEVWLSQSDSREEQVVMVNGLRAMA 385

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556003|ref|XP_002519036.1| expressed protein, putative [Ricinus communis] gi|223541699|gb|EEF43247.1| expressed protein, putative [Ricinus communis]

 Score =  619 bits (1596), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 296/386 (76%), Positives = 337/386 (87%), Gaps = 7/386 (1%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+TPGTHSLAFRVMRLCRPS HV+  L VDP+DL +GEDIFDDP+AAS LPPLI S +T
Sbjct: 1   MSTTPGTHSLAFRVMRLCRPSFHVDAQLLVDPSDLIVGEDIFDDPVAASRLPPLIDSHIT 60

Query: 61  T-NKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRD 119
               +SDL+YR+RFL    +DS GL+GLLVLPQAFGAIYLGETFCSYISINNSS  EVRD
Sbjct: 61  KLTDTSDLSYRTRFLHQHPSDSFGLTGLLVLPQAFGAIYLGETFCSYISINNSSNFEVRD 120

Query: 120 VVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
           V+IKAEIQT++QRILLLDTSK+PVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDG+G
Sbjct: 121 VIIKAEIQTERQRILLLDTSKNPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGDG 180

Query: 180 ERKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSAT 239
           ERKYLPQFFKFIV+NPLSVRTKVRVVKE T+LEACIENHTK+NLYMDQVEFEP+Q+WSA 
Sbjct: 181 ERKYLPQFFKFIVANPLSVRTKVRVVKETTYLEACIENHTKTNLYMDQVEFEPAQHWSAK 240

Query: 240 MLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 299
           ++K D   S+ ++ +REIFKPPVLIRSGGGIHNYLYQL++ +HG++       SNVLGKL
Sbjct: 241 IIKDDEKQSEKDSLTREIFKPPVLIRSGGGIHNYLYQLRLSAHGAAQ------SNVLGKL 294

Query: 300 QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQ 359
           QITWRTNLGEPGRLQTQQILGT IT KEIEL + +VP+V+ +DKPF + LKLTN TDKE 
Sbjct: 295 QITWRTNLGEPGRLQTQQILGTPITRKEIELCIAKVPAVINLDKPFSVHLKLTNHTDKEL 354

Query: 360 GPFEIWLSQNDSDEEKVVMINGLRIM 385
           GPFE+WLSQ+ S EEK V INGL+ M
Sbjct: 355 GPFEVWLSQDGSVEEKAVTINGLQTM 380

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457717|ref|XP_004146594.1| PREDICTED: UPF0533 protein C5orf44-like [Cucumis sativus]

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 283/386 (73%), Positives = 346/386 (89%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+  G+HSLAFRVMRLCRPS  V+PPLR+DP DL +GEDI DDP+AA+ LP L++  ++
Sbjct: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
            +  SDL+Y SRFLLHDS+D++GL+GLLVLPQAFGAIYLGETFCSYIS+NNSS  EVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 121 VIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGE 180
           +IKAEIQT++QRILLLD+SKSPVE+IRAGGRYDFIVEHDVKELGAHTLVCTALY+DG+GE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 181 RKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           RKYLPQFFKF+V+NPLSVRTKVRVVK+ TFLEACIENHTKSNL+MDQV+FEPS NW+A +
Sbjct: 181 RKYLPQFFKFMVANPLSVRTKVRVVKDSTFLEACIENHTKSNLFMDQVDFEPSPNWNAVI 240

Query: 241 LKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQ 300
           + AD  HS++ + +RE+FKPPVL+RSGGGIHN+LYQLK  ++G SSP+KV+GSN+LGKLQ
Sbjct: 241 INADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLYQLKCSTNGPSSPLKVEGSNILGKLQ 300

Query: 301 ITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQG 360
           ITWRTN+GEPGRLQTQQILG+ IT KE+ELNVVE+P V+ +++PF L ++LT Q ++E G
Sbjct: 301 ITWRTNMGEPGRLQTQQILGSPITRKELELNVVEMPDVIRLERPFTLHMRLTTQIERELG 360

Query: 361 PFEIWLSQNDSDEEKVVMINGLRIMV 386
           PFE+W+S N SDE+KVVM+NGL+ +V
Sbjct: 361 PFEVWMSLNSSDEDKVVMVNGLQKVV 386

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548745|ref|XP_003542760.1| PREDICTED: UPF0533 protein C5orf44 homolog [Glycine max]

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 292/380 (76%), Positives = 332/380 (87%), Gaps = 4/380 (1%)

Query: 7   THSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSD 66
           +HSLAFRVMRLCRPS +VEPPLR+DPTDLF+GED+FDDP A    P   SS    +  SD
Sbjct: 12  SHSLAFRVMRLCRPSFNVEPPLRLDPTDLFVGEDLFDDPAAK---PHSFSSAAAHDDDSD 68

Query: 67  LTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEI 126
             YR+RFLL   +D++GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVR+V+IKAEI
Sbjct: 69  PNYRNRFLLRHFSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVLIKAEI 128

Query: 127 QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQ 186
           QT++QRILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQ
Sbjct: 129 QTERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQ 188

Query: 187 FFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
           FFKFIV+NPLSVRTKVRV+KE TFLEACIENHTKSNL+MDQV+FEP+Q +SAT+LK DG 
Sbjct: 189 FFKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQYYSATILKGDGH 248

Query: 247 HSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTN 306
           HS+ ++ +REIFKPP+LIRSGGGI+NYLYQLK LS GS    KV+GSNVLGKLQITWRTN
Sbjct: 249 HSEKDSPTREIFKPPILIRSGGGIYNYLYQLKTLSDGSPQ-TKVEGSNVLGKLQITWRTN 307

Query: 307 LGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWL 366
           LGEPGRLQTQQILGT  T KEIEL VVEVPS++ + KPF+LKL LTNQTD+E GPFE+ L
Sbjct: 308 LGEPGRLQTQQILGTPATKKEIELQVVEVPSIINLQKPFMLKLNLTNQTDRELGPFEVGL 367

Query: 367 SQNDSDEEKVVMINGLRIMV 386
           SQN S  E+VVMINGL+ MV
Sbjct: 368 SQNVSYGERVVMINGLQSMV 387

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079249|ref|XP_002305809.1| predicted protein [Populus trichocarpa] gi|222848773|gb|EEE86320.1| predicted protein [Populus trichocarpa]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 285/389 (73%), Positives = 329/389 (84%), Gaps = 11/389 (2%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+ P T SLAFRVMRLCRPS HV+ PL +DP+DL +GEDIFDDP+AA++LPPLI + +T
Sbjct: 1   MSTPPATQSLAFRVMRLCRPSFHVDTPLLLDPSDLILGEDIFDDPLAATHLPPLIDTHLT 60

Query: 61  TN-KSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRD 119
               SSDL+YRSRFLL + +DS GLSGLLVLPQ+FGAIYLGETFCSY+SINNSS  EVRD
Sbjct: 61  NPIDSSDLSYRSRFLLQNPSDSFGLSGLLVLPQSFGAIYLGETFCSYVSINNSSNFEVRD 120

Query: 120 VVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEG 179
           +VIKAE+QT++QRILLLDTSK+PVESIRA GRYDFIVEHDVKELGAHTLVCTALY+DG+G
Sbjct: 121 IVIKAEMQTERQRILLLDTSKTPVESIRASGRYDFIVEHDVKELGAHTLVCTALYTDGDG 180

Query: 180 ERKYLPQFFKFIVSNPLSVRTKV---RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNW 236
           ERKYLPQFFKFIV+NPLSVRTKV    V +E T+LEACIENHTK+NLYMDQVEFEP+ NW
Sbjct: 181 ERKYLPQFFKFIVANPLSVRTKVLLLLVSQETTYLEACIENHTKTNLYMDQVEFEPAPNW 240

Query: 237 SATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVL 296
           SA +LKAD   S  N+ SR     P L++SGGGI NYLYQL + SHGS+       SNVL
Sbjct: 241 SAKILKADEHKSKDNSPSR-CGNIPFLVKSGGGIRNYLYQLSLSSHGSAE------SNVL 293

Query: 297 GKLQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD 356
           GKLQITWRTNLGEPGRLQTQQILGT IT KEIEL+V EVPS + +D+PFL+ L LTNQTD
Sbjct: 294 GKLQITWRTNLGEPGRLQTQQILGTPITPKEIELHVAEVPSAINLDRPFLVHLNLTNQTD 353

Query: 357 KEQGPFEIWLSQNDSDEEKVVMINGLRIM 385
           +E GPFE+WLSQ+D+ +EK VMINGL+ M
Sbjct: 354 RELGPFEVWLSQDDTLDEKTVMINGLQTM 382

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346667|ref|XP_003637387.1| hypothetical protein MTR_084s0010 [Medicago truncatula] gi|355503322|gb|AES84525.1| hypothetical protein MTR_084s0010 [Medicago truncatula]

 Score =  582 bits (1501), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 282/389 (72%), Positives = 329/389 (84%), Gaps = 8/389 (2%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           HS+AFRVMRLCRPS +V+PPLR+DP DLF+GED FDDP A S      SSD+     SD 
Sbjct: 14  HSVAFRVMRLCRPSFNVDPPLRIDPDDLFVGEDHFDDPSAPS------SSDLIA-PDSDP 66

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
            YR+RFLL   +DS+GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVR+V+IKAEIQ
Sbjct: 67  NYRNRFLLQHFSDSMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVIIKAEIQ 126

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T++QRILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQF
Sbjct: 127 TERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQF 186

Query: 188 FKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPH 247
           FKFIV+NPLSVRTKVRV+KE TFLEACIENHTKSNL+MDQV+FEP+Q++SAT+L+ DGPH
Sbjct: 187 FKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQHYSATILRGDGPH 246

Query: 248 SDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNL 307
           ++ +  +RE FKPP+LIRSGGGI+NYLYQLK  S   S+  KV+G+NVLGKLQITWRTNL
Sbjct: 247 TEKDNTARETFKPPILIRSGGGIYNYLYQLKS-SLDDSAQTKVEGNNVLGKLQITWRTNL 305

Query: 308 GEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLS 367
           GEPGRLQTQQILGT  T KEIEL VVEVPS++ + +PF LKL LTN T++E GPF++ +S
Sbjct: 306 GEPGRLQTQQILGTPTTKKEIELQVVEVPSIINLQRPFTLKLNLTNLTERELGPFKVSVS 365

Query: 368 QNDSDEEKVVMINGLRIMVTQFGWLIETI 396
           QN S  E  VMINGL+ MV    W+I  +
Sbjct: 366 QNGSSGETAVMINGLQSMVMHSLWIISVL 394

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521339|ref|XP_003529314.1| PREDICTED: UPF0533 protein C5orf44-like [Glycine max]

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 285/380 (75%), Positives = 326/380 (85%), Gaps = 8/380 (2%)

Query: 7   THSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSD 66
           +HSLAFRVMRLCRPS +VEPPLR+DP DLF GED+FDDP A    PP  SS   ++ +  
Sbjct: 11  SHSLAFRVMRLCRPSFNVEPPLRLDPADLFAGEDLFDDPAAN---PPSFSSSDDSDSN-- 65

Query: 67  LTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEI 126
             YR+RFLL   +D++GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVRDV+IKAEI
Sbjct: 66  --YRNRFLLRHFSDAMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVRDVIIKAEI 123

Query: 127 QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQ 186
           QT++ RILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQ
Sbjct: 124 QTERLRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQ 183

Query: 187 FFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGP 246
           FFKFIV+NPLSVRTKVRV+KE TFLEACIENHTKSNL+MDQV+FEP+Q +SA++LK DG 
Sbjct: 184 FFKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQYYSASILKGDGH 243

Query: 247 HSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTN 306
           HS+ ++ +RE FKPP+LIRSGGGI+NYLYQLK  S G     KV+GSNVLGKLQITWRTN
Sbjct: 244 HSEKDSPTRETFKPPILIRSGGGIYNYLYQLKTSSDGLPQ-TKVEGSNVLGKLQITWRTN 302

Query: 307 LGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWL 366
           LGEPGRLQTQQILGTT T KEIEL VVEVPS++ +  PF+LKL LTNQTD+E GPFE+ L
Sbjct: 303 LGEPGRLQTQQILGTTATKKEIELQVVEVPSIINLQNPFMLKLNLTNQTDRELGPFEVSL 362

Query: 367 SQNDSDEEKVVMINGLRIMV 386
           SQN S  E+ VMINGL+ MV
Sbjct: 363 SQNVSYGERAVMINGLQSMV 382

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496064|gb|AFK36098.1| unknown [Medicago truncatula]

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 280/379 (73%), Positives = 325/379 (85%), Gaps = 8/379 (2%)

Query: 8   HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
           HS+AFRVMRLCRPS +V+PPLR+DP DLF+GED FDDP A S      SSD+     SD 
Sbjct: 14  HSVAFRVMRLCRPSFNVDPPLRIDPDDLFVGEDHFDDPSAPS------SSDLIA-PDSDP 66

Query: 68  TYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQ 127
            YR+RFLL   +DS+GLSGLLVLPQ+FGAIYLGETFCSYISINNSS  EVR+V+IKAEIQ
Sbjct: 67  NYRNRFLLQHFSDSMGLSGLLVLPQSFGAIYLGETFCSYISINNSSNFEVREVIIKAEIQ 126

Query: 128 TDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQF 187
           T++QRILLLDTSKSPVE+IRAGGRYDFIVEHDVKELG HTLVCTALY+DG+GERKYLPQF
Sbjct: 127 TERQRILLLDTSKSPVETIRAGGRYDFIVEHDVKELGPHTLVCTALYNDGDGERKYLPQF 186

Query: 188 FKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPH 247
           FKFIV+NPLSVRTKVRV+KE TFLEACIENHTKSNL+MDQV+FEP+Q++SAT+L+ DGPH
Sbjct: 187 FKFIVANPLSVRTKVRVIKETTFLEACIENHTKSNLFMDQVDFEPAQHYSATILRGDGPH 246

Query: 248 SDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNL 307
           ++ +  +RE FKPP+LIRSGGGI+NYLYQLK  S   S+  KV+G+NVLGKLQITWRTNL
Sbjct: 247 TEKDNTARETFKPPILIRSGGGIYNYLYQLKS-SLDDSAQTKVEGNNVLGKLQITWRTNL 305

Query: 308 GEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLS 367
           GEPGRLQTQQILGT  T KEIEL VVEVPS++ + +PF LKL LTN T++E GPF++ +S
Sbjct: 306 GEPGRLQTQQILGTPTTKKEIELQVVEVPSIINLQRPFTLKLNLTNLTERELGPFKVSVS 365

Query: 368 QNDSDEEKVVMINGLRIMV 386
           QN S  E  VMINGL+ MV
Sbjct: 366 QNGSSGETAVMINGLQSMV 384

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824907|ref|XP_002880336.1| hypothetical protein ARALYDRAFT_483987 [Arabidopsis lyrata subsp. lyrata] gi|297326175|gb|EFH56595.1| hypothetical protein ARALYDRAFT_483987 [Arabidopsis lyrata subsp. lyrata]

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 267/388 (68%), Positives = 314/388 (80%), Gaps = 5/388 (1%)

Query: 1   MSSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVT 60
           MS+T G HSLAFRVMRLC+PS HV+PPLR+DP DL  GED  DDP +AS     +SS   
Sbjct: 1   MSATHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADA 60

Query: 61  TNKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDV 120
            +  SDL+YR+RFLL+   D IGLSGLL+LPQ+FGAIYLGETFCSYIS+NNSST EVRDV
Sbjct: 61  VD--SDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDV 118

Query: 121 VIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGE 180
            IKAEIQT++QRILLLDTSKSPVESIR GGRYDFIVEHDVKELGAHTLVC+ALY+D +GE
Sbjct: 119 TIKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGE 178

Query: 181 RKYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM 240
           RKYLPQFFKF+V+NPLSVRTKVRVVKE TFLEACIENHTK+NL+MDQV+FEP++ WSA  
Sbjct: 179 RKYLPQFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSAVR 238

Query: 241 LKADGPHSD--YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGK 298
           L+ +    D   +  S  I KPPV+IRSGGGIHNYLY+L   S   S   K QGSN+LGK
Sbjct: 239 LQNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNP-SADVSGQTKFQGSNILGK 297

Query: 299 LQITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKE 358
            QITWRTNLGEPGRLQTQQILG  ++ KEI + V EVP+V+ +++PF   L LTNQTD++
Sbjct: 298 FQITWRTNLGEPGRLQTQQILGAPVSRKEINMRVAEVPAVIHLNRPFPAYLNLTNQTDRQ 357

Query: 359 QGPFEIWLSQNDSDEEKVVMINGLRIMV 386
            GPFE+ LSQ++S  EK V INGL+ ++
Sbjct: 358 LGPFEVSLSQDESQMEKPVGINGLQTLM 385

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18407493|ref|NP_566117.1| uncharacterized protein [Arabidopsis thaliana] gi|16226796|gb|AAL16264.1|AF428334_1 At2g47960/T9J23.10 [Arabidopsis thaliana] gi|18377797|gb|AAL67048.1| unknown protein [Arabidopsis thaliana] gi|20197311|gb|AAC63650.2| expressed protein [Arabidopsis thaliana] gi|20197565|gb|AAM15133.1| expressed protein [Arabidopsis thaliana] gi|21281259|gb|AAM45021.1| unknown protein [Arabidopsis thaliana] gi|330255823|gb|AEC10917.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 265/387 (68%), Positives = 313/387 (80%), Gaps = 5/387 (1%)

Query: 2   SSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTT 61
           + T G HSLAFRVMRLC+PS HV+PPLR+DP DL  GED  DDP +AS     +SS    
Sbjct: 6   TQTHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADAV 65

Query: 62  NKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVV 121
           +  SDL+YR+RFLL+   D IGLSGLL+LPQ+FGAIYLGETFCSYIS+NNSST EVRDV 
Sbjct: 66  D--SDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVT 123

Query: 122 IKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGER 181
           IKAEIQT++QRILLLDTSKSPVESIR GGRYDFIVEHDVKELGAHTLVC+ALY+D +GER
Sbjct: 124 IKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGER 183

Query: 182 KYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATML 241
           KYLPQFFKF+V+NPLSVRTKVRVVKE TFLEACIENHTK+NL+MDQV+FEP++ WSA  L
Sbjct: 184 KYLPQFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSAVRL 243

Query: 242 KADGPHSD--YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 299
           + +    D   +  S  I KPPV+IRSGGGIHNYLY+L   S   S   K QGSN+LGK 
Sbjct: 244 QNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNP-SADVSGQTKFQGSNILGKF 302

Query: 300 QITWRTNLGEPGRLQTQQILGTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQ 359
           QITWRTNLGEPGRLQTQQILG  ++ KEI + VVEVP+V+ +++PF   L LTNQTD++ 
Sbjct: 303 QITWRTNLGEPGRLQTQQILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLTNQTDRQL 362

Query: 360 GPFEIWLSQNDSDEEKVVMINGLRIMV 386
           GPFE+ LSQ+++  EK V INGL+ ++
Sbjct: 363 GPFEVSLSQDETQLEKPVGINGLQTLM 389

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
TAIR|locus:2043433	442	AT2G47960 "AT2G47960" [Arabido	0.943	0.864	0.664	7.1e-132
ZFIN|ZDB-GENE-030131-9775	412	trappc13 "trafficking protein	0.671	0.660	0.368	2.6e-49
MGI|MGI:1914225	417	Trappc13 "trafficking protein	0.674	0.654	0.351	7.6e-46
DICTYBASE|DDB_G0269062	511	DDB_G0269062 "DUF974 family pr	0.580	0.459	0.348	2e-45
FB|FBgn0032204	438	CG4953 [Drosophila melanogaste	0.661	0.611	0.343	5.2e-41
UNIPROTKB|G4NC96	339	MGG_01105 "Uncharacterized pro	0.234	0.280	0.324	0.00039

TAIR|locus:2043433 AT2G47960 "AT2G47960" [Arabidopsis thaliana (taxid:3702)]

 Score = 1293 (460.2 bits), Expect = 7.1e-132, P = 7.1e-132
 Identities = 257/387 (66%), Positives = 303/387 (78%)

Query:     2 SSTPGTHSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTT 61
             + T G HSLAFRVMRLC+PS HV+PPLR+DP DL  GED  DDP +AS     +SS    
Sbjct:     6 TQTHGPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSSADAV 65

Query:    62 NKSSDLTYRSRFLLHDSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVV 121
             +  SDL+YR+RFLL+   D IGLSGLL+LPQ+FGAIYLGETFCSYIS+NNSST EVRDV 
Sbjct:    66 D--SDLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVT 123

Query:   122 IKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGER 181
             IKAEIQT++QRILLLDTSKSPVESIR GGRYDFIVEHDVKELGAHTLVC+ALY+D +GER
Sbjct:   124 IKAEIQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGER 183

Query:   182 KYLPQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATML 241
             KYLPQFFKF+V+NPLSVRTKVRVVKE TFLEACIENHTK+NL+MDQV+FEP++ WSA  L
Sbjct:   184 KYLPQFFKFVVANPLSVRTKVRVVKETTFLEACIENHTKANLFMDQVDFEPAKQWSAVRL 243

Query:   242 KADGPHSD--YNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKL 299
             + +    D   +  S  I KPPV+IRSGGGIHNYLY+L   S   S   K QGSN+LGK 
Sbjct:   244 QNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLNP-SADVSGQTKFQGSNILGKF 302

Query:   300 QITWRTNLGEPGRXXXXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQ 359
             QITWRTNLGEPGR             KEI + VVEVP+V+ +++PF   L LTNQTD++ 
Sbjct:   303 QITWRTNLGEPGRLQTQQILGAPVSRKEINMRVVEVPAVIHLNRPFRAYLNLTNQTDRQL 362

Query:   360 GPFEIWLSQNDSDEEKVVMINGLRIMV 386
             GPFE+ LSQ+++  EK V INGL+ ++
Sbjct:   363 GPFEVSLSQDETQLEKPVGINGLQTLM 389

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

ZFIN|ZDB-GENE-030131-9775 trappc13 "trafficking protein particle complex 13" [Danio rerio (taxid:7955)]

 Score = 459 (166.6 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
 Identities = 104/282 (36%), Positives = 158/282 (56%)

Query:    79 ADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDT 138
             A+++ L  +L LPQ FG I+LGETF SYIS++N S+  V+D+++KA++QT  QR L L  
Sbjct:    56 AETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDILVKADLQTSSQR-LNLSA 114

Query:   139 SKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSV 198
             S S V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL V
Sbjct:   115 SNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGEKLYFRKFFKFQVLKPLDV 174

Query:   199 RTKV-RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLK--ADGPHSDYNAQSR 255
             +TK      +  FLEA I+N T S ++M++V  EPS  ++ T L   A G  S  +   +
Sbjct:   175 KTKFYNAETDEVFLEAQIQNITTSPMFMEKVSLEPSMMYNVTELNNVASGDESSESTFGK 234

Query:   256 EIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRXXX 315
               +  P+  R       YLY LK     +     ++G  V+GKL I W+TNLGE GR   
Sbjct:   235 MSYLQPLDTRQ------YLYCLKPKPEFAEKAGVIKGVTVIGKLDIVWKTNLGERGRLQT 288

Query:   316 XXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
                        ++ L++  +P  V +++PF +  K+TN +++
Sbjct:   289 SQLQRMAPGYGDVRLSLEFIPDTVDLEEPFDITCKITNCSER 330

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:1914225 Trappc13 "trafficking protein particle complex 13" [Mus musculus (taxid:10090)]

 Score = 431 (156.8 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
 Identities = 102/290 (35%), Positives = 157/290 (54%)

Query:    77 DSADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLL 136
             + A+ + L  +L LPQ FG I+LGETF SYIS++N S   V+D+++KA++QT  QR L L
Sbjct:    54 NGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQR-LNL 112

Query:   137 DTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPL 196
               S + V  ++     D ++ H+VKE+G H LVC   Y+   GE+ Y  +FFKF V  PL
Sbjct:   113 SASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGEKMYFRKFFKFQVLKPL 172

Query:   197 SVRTK-------VRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSD 249
              V+TK       +  V +  FLEA I+N T S ++M++V  EPS  ++ T L +     +
Sbjct:   173 DVKTKFYNAESDLSSVTDEVFLEAQIQNITTSPMFMEKVSLEPSIMYNVTELNSVTQAGE 232

Query:   250 YNAQ--SREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNL 307
               +   SR   +P            YLY LK     +     ++G  V+GKL I W+TNL
Sbjct:   233 CISTFGSRGYLQPM-------DTRQYLYCLKPKKEFAEKAGIIKGVTVIGKLDIVWKTNL 285

Query:   308 GEPGRXXXXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDK 357
             GE GR              ++ L++  +P  V +++PF +  K+TN +++
Sbjct:   286 GERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSER 335

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE|DDB_G0269062 DDB_G0269062 "DUF974 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 376 (137.4 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
 Identities = 86/247 (34%), Positives = 141/247 (57%)

Query:     8 HSLAFRVMRLCRPSLHVEPPLRVDPTDLFIGEDIFDDPIAASNLPPLISSDVTTNKSSDL 67
             H L  +VMRL +P++    P+  +  DL    +     I +++L       V ++ S+D 
Sbjct:     5 HLLNLKVMRLSKPNIPTINPILCEKQDL--PYETMSTSIDSTSLS---MGSVNSSGSND- 58

Query:    68 TYRSRFLLHDSADSIGLSGLLV---LPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKA 124
                +  L+ ++ + I + GL V   L    G IYLGE FC YIS+NN S  +VR+V +K 
Sbjct:    59 ---NNQLIGNNGNPINMEGLGVTSMLQLQSGVIYLGEMFCCYISLNNHSPYQVRNVFLKV 115

Query:   125 EIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYL 184
             E+QT   RI LLD+ +  V +   G   DF+V+ +VKE G + LVC   Y+  EGE+K  
Sbjct:   116 ELQTTSSRIPLLDSEQQSVPTFNPGFSSDFVVQREVKESGVNILVCAVNYTTPEGEQKKF 175

Query:   185 PQFFKFIVSNPLSVRTKVRVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKAD 244
              ++FKF V NPL ++T++  +  + FLEAC+EN T+ +L+++ + FEP +++++  +  +
Sbjct:   176 RKYFKFQVLNPLVLKTRIHNLPNVVFLEACLENATQGSLFIESILFEPIEHFNSKDISFE 235

Query:   245 GPHSDYN 251
                 D N
Sbjct:   236 NSLDDNN 242

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0032204 CG4953 [Drosophila melanogaster (taxid:7227)]

 Score = 383 (139.9 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
 Identities = 97/282 (34%), Positives = 156/282 (55%)

Query:    79 ADSIGLSGLLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLL-- 136
             A+++    +L+LPQ+FG+IYLGETF SYI ++N++   V  V +KA++Q++  RI L   
Sbjct:    55 AETLAAGQVLLLPQSFGSIYLGETFASYICVHNTTPNPVECVTVKADLQSNTSRINLSMH 114

Query:   137 DTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPL 196
             + +KSPV  +  GG  D ++ ++VKE+G H LVC   YS   G  + L +FFKF V  PL
Sbjct:   115 ENAKSPVV-LPPGGTIDDVIRYEVKEIGTHILVCEVNYSTPAGYAQSLRKFFKFQVLKPL 173

Query:   197 SVRTKV--RVVKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQS 254
              V+TK     + EI +LEA I+N T S   +++VE + S+++S T L    P    N +S
Sbjct:   174 DVKTKFYNAEIDEI-YLEAQIQNVTTSPFCLEKVELDGSEDYSVTPLNTL-P----NGES 227

Query:   255 REIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRXX 314
               +F    +++       +LY +K     + +   ++  N +GKL I WR+NLGE GR  
Sbjct:   228 --VFTVKHMLQPNNSCQ-FLYCIKPKGDIAKNVDTLRQFNNVGKLDIVWRSNLGEKGRLQ 284

Query:   315 XXXXXXXXXXSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTD 356
                        K + L V++  + + I   F    ++TN ++
Sbjct:   285 TSQLQRLPFECKTLRLEVLDAKNTIKIGTIFTFNCRVTNTSE 326

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G4NC96 MGG_01105 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 101 (40.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
 Identities = 36/111 (32%), Positives = 52/111 (46%)

Query:    80 DSIGLSGLLVLPQAFGAIYLGETFCSYISINN-----SSTLEVRDVVIKAEIQTDKQR-- 132
             D   LS +L LP +FG+ Y+GETF   +  N+     ++  +VRDV I+AE++T      
Sbjct:    65 DPFILSPILNLPPSFGSAYVGETFSCTLCANHDVPDGAAARQVRDVRIEAEMKTPGSAAG 124

Query:   133 -ILLLDTSKSPVES--------IRAGGRYDFIVEHDVKELGAHTLVCTALY 174
              +  LD   +            +R G     IV  D+KE G H L  T  Y
Sbjct:   125 VVTKLDLGPNGGGGGEGDGGVDLREGETLQRIVRFDLKEEGNHVLAVTVSY 175

GO:0005575 "cellular_component" evidence=ND

GO:0043581 "mycelium development" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	405
pfam06159	235	pfam06159, DUF974, Protein of unknown function (DU	1e-102

>gnl|CDD|218917 pfam06159, DUF974, Protein of unknown function (DUF974)

 Score =  303 bits (777), Expect = e-102
 Identities = 115/236 (48%), Positives = 151/236 (63%), Gaps = 7/236 (2%)

Query: 88  LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIR 147
           L LPQ+FG+IYLGETF SY+ +NN S+ EVRDV IKAE+QT  QR+ L D+  +PVE++R
Sbjct: 1   LTLPQSFGSIYLGETFSSYLCVNNESSKEVRDVSIKAELQTPSQRLNLSDSVDAPVETLR 60

Query: 148 AGGRYDFIVEHDVKELGAHTLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVVKE 207
            G   DF+V  DVKE G H LVCT  Y++  GE +Y  +FFKFIV NPLSVRTK   +++
Sbjct: 61  PGESLDFVVSFDVKEEGTHILVCTVSYTEASGETRYFRKFFKFIVKNPLSVRTKFYQLED 120

Query: 208 I----TFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVL 263
           +     +LEA IEN T+ NL++++V  EPS  + AT L  +    D +     + K PVL
Sbjct: 121 LSRRRVYLEAQIENITEDNLFLEKVTLEPSPGYKATSLNWEPSLGDVDGLDGGMDKRPVL 180

Query: 264 IRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQIL 319
               G I  YL+ LK    G+   +K+ G   LGKL I WRT +GE GRLQT Q+ 
Sbjct: 181 --KPGDIRQYLFCLKP-KEGALEELKLDGRTNLGKLDIVWRTAMGEKGRLQTSQLQ 233

Family of uncharacterized eukaryotic proteins. Length = 235

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	405
KOG2625	348	consensus Uncharacterized conserved protein [Funct	100.0
PF06159	249	DUF974: Protein of unknown function (DUF974); Inte	100.0
PF07919	554	Gryzun: Gryzun, putative trafficking through Golgi	99.46
PF08626	1185	TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC	97.76
PF12735	306	Trs65: TRAPP trafficking subunit Trs65; InterPro:	96.12
PF07705	101	CARDB: CARDB; InterPro: IPR011635 The APHP (acidic	94.21
PF10633	78	NPCBM_assoc: NPCBM-associated, NEW3 domain of alph	94.11
KOG4386	809	consensus Uncharacterized conserved protein [Funct	93.28
PF14874	102	PapD-like: Flagellar-associated PapD-like	93.09
PF07919	554	Gryzun: Gryzun, putative trafficking through Golgi	92.98
PF00927	107	Transglut_C: Transglutaminase family, C-terminal i	92.54
PF07705	101	CARDB: CARDB; InterPro: IPR011635 The APHP (acidic	92.15
PF00207	92	A2M: Alpha-2-macroglobulin family; InterPro: IPR00	86.41
PF10633	78	NPCBM_assoc: NPCBM-associated, NEW3 domain of alph	84.35
PF05753	181	TRAP_beta: Translocon-associated protein beta (TRA	84.11
PF11797	140	DUF3324: Protein of unknown function C-terminal (D	82.49

>KOG2625 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.3e-91  Score=649.20  Aligned_cols=302  Identities=30%  Similarity=0.523  Sum_probs=278.1

Q ss_pred             cccccccccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEeccccCce
Q 015529           87 LLVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAH  166 (405)
Q Consensus        87 ~L~LP~sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~H  166 (405)
                      +|.+||.||+|||||||++||++||+|++.|++|.+|+|+||.+||+.|... .....+|+|.++.|.||+|||||+|+|
T Consensus         1 ~l~~pq~f~niflgetfs~yinv~nds~k~v~~i~lk~dlqtssqrl~l~~s-~~~~aei~~~~c~~~vi~hevkeig~h   79 (348)
T KOG2625|consen    1 MLIAPQMFENIFLGETFSFYINVHNDSEKTVKDILLKADLQTSSQRLNLPAS-NAAAAEIEPDCCEDDVIHHEVKEIGQH   79 (348)
T ss_pred             CccchhhhcceeeccceEEEEEEecchhhhhhhheeeecccccceeeccccc-hhhhhhcCccccchhhhhHHHHhhccE
Confidence            4789999999999999999999999999999999999999999999999653 345678999999999999999999999


Q ss_pred             EEEEEEEEEcCCCcccccceeeeEEeeCCeEEeEEEEEe-------CCeeEEEEEEEecCCccEEEEeEEeeecCCceee
Q 015529          167 TLVCTALYSDGEGERKYLPQFFKFIVSNPLSVRTKVRVV-------KEITFLEACIENHTKSNLYMDQVEFEPSQNWSAT  239 (405)
Q Consensus       167 iLvc~V~Y~~~~Ge~~~frK~fkF~v~~PL~VkTK~~~~-------~~~~~LEaqlqN~s~~~l~Le~v~lep~~~~~~~  239 (405)
                      +|+|+|+|++.+||++||||||||+|.+|++||||||++       .|++||||||||+|..+|+||+|+|+|+.+|.++
T Consensus        80 ilicavny~tq~ge~myfrkffkf~v~kpidvktkfynaesdlssv~~dvfleaqien~s~a~mflekv~ldps~~ynvt  159 (348)
T KOG2625|consen   80 ILICAVNYKTQAGEKMYFRKFFKFPVLKPIDVKTKFYNAESDLSSVNDDVFLEAQIENMSNANMFLEKVELDPSIHYNVT  159 (348)
T ss_pred             EEEEEEeeeccCccchhHHhhccccccccccccceeecccccccccchhhhhhhhhhcccccchhhhhhccCchheecce
Confidence            999999999999999999999999999999999999976       5789999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCCCcccccCCceEEcCCCCeeeEEEEEeecCCCCCCCccccCCeeeeEEEEEEecCCCCceeeeeeccc
Q 015529          240 MLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGRLQTQQIL  319 (405)
Q Consensus       240 ~ln~~~~~~~~~~~~~~~~~~~~l~~~~~d~rqyLf~l~p~~~~~~~~~~~~g~~~lGkLdI~WRs~~Ge~G~LqTs~L~  319 (405)
                      +++.+.+.++.-++++    ..- +++|.|+|||||||+||.+..++..-.++.+.+|||||.||++|||+|||||++||
T Consensus       160 ~i~~~~e~gdcvstfg----~~~-~lkp~d~rq~l~cl~pk~d~~~~~gi~k~lt~igkldi~wktnlgekgrlqts~lq  234 (348)
T KOG2625|consen  160 EIAHEDEAGDCVSTFG----SGA-LLKPKDIRQFLFCLKPKADFAEKAGIIKDLTSIGKLDISWKTNLGEKGRLQTSALQ  234 (348)
T ss_pred             eecchhhccccccccc----ccc-ccCccchhhheeecCchHHHHHhhccccccceeeeeEEEeeccccccccchHHHHH
Confidence            9998877776554433    222 35688999999999999888755544788999999999999999999999999999


Q ss_pred             cccCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeee
Q 015529          320 GTTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIET  395 (405)
Q Consensus       320 ~~~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~  395 (405)
                      |.+|+|+|+||+++.+|+.|.+++||.++|+++|||+|.|+ |.+++++....-+.||||||++||+|+|.+.++-
T Consensus       235 riapgygdvrlsle~~p~~vdleepf~iscki~ncserald-l~l~l~~~nnrhi~~c~~sg~qlgkl~ps~~l~~  309 (348)
T KOG2625|consen  235 RIAPGYGDVRLSLEAIPACVDLEEPFEISCKITNCSERALD-LQLELCNPNNRHIHFCGISGRQLGKLHPSQHLCF  309 (348)
T ss_pred             hhcCCCCceEEEeeccccccccCCCeEEEEEEcccchhhhh-hhhhhcCCCCceeEEeccccccccCCCCcceeee
Confidence            99999999999999999999999999999999999999997 9999999844449999999999999999998764

>PF06159 DUF974: Protein of unknown function (DUF974); InterPro: IPR010378 This is a family of uncharacterised eukaryotic proteins

Probab=100.00  E-value=9.7e-75  Score=558.17  Aligned_cols=234  Identities=44%  Similarity=0.706  Sum_probs=208.4

Q ss_pred             ccccccccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCc--eeeccCCCCC--CccccCCCCeeeEEEEEecccc
Q 015529           88 LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQ--RILLLDTSKS--PVESIRAGGRYDFIVEHDVKEL  163 (405)
Q Consensus        88 L~LP~sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~--r~~L~~~~~~--~~~~L~pg~~ld~iv~helKE~  163 (405)
                      |+||+|||+|||||||+||||+||+++++|++|.|||||||+++  |+.|.++...  +..+|+||+++|+||+|||||+
T Consensus         1 L~LP~sfG~iylGEtF~~~l~~~N~s~~~v~~v~ikvemqT~s~~~r~~L~~~~~~~~~~~~L~p~~~l~~iv~~~lkE~   80 (249)
T PF06159_consen    1 LTLPQSFGSIYLGETFSCYLSVNNDSNKPVRNVRIKVEMQTPSQSLRLPLSDNENSDSPVASLAPGESLDFIVSHELKEL   80 (249)
T ss_pred             CCCCcccCCEeecCCEEEEEEeecCCCCceEEeEEEEEEeCCCCCccccCCCCccccccccccCCCCeEeEEEEEEeeec
Confidence            78999999999999999999999999999999999999999999  9999876544  5678999999999999999999


Q ss_pred             CceEEEEEEEEEcC---CCcccccceeeeEEeeCCeEEeEEEEEeCC--------eeEEEEEEEecCCccEEEEeEEeee
Q 015529          164 GAHTLVCTALYSDG---EGERKYLPQFFKFIVSNPLSVRTKVRVVKE--------ITFLEACIENHTKSNLYMDQVEFEP  232 (405)
Q Consensus       164 G~HiLvc~V~Y~~~---~Ge~~~frK~fkF~v~~PL~VkTK~~~~~~--------~~~LEaqlqN~s~~~l~Le~v~lep  232 (405)
                      |+|+|+|+|+|+++   +||+|+|||||||+|.+||+||||++++.+        ++||||||||+|+.||+||+|+|||
T Consensus        81 G~h~L~c~VsY~~~~~~~g~~~tfRK~ykF~v~~PL~VktK~~~~~~~~~~~~~~~~~LEaqlqN~s~~pl~Le~v~lep  160 (249)
T PF06159_consen   81 GNHTLVCTVSYTDPTETSGERRTFRKFYKFQVLNPLSVKTKVYNLEDDSSLSPRERVFLEAQLQNISSGPLFLEKVKLEP  160 (249)
T ss_pred             CceEEEEEEEEecCcccCCccceEeeeeEEeCCCCcEEEEEEEecCCccccccceeEEEEEEEEecCCCceEEEEEEeec
Confidence            99999999999999   999999999999999999999999999976        8999999999999999999999999


Q ss_pred             cCCceeeeecCCCCCCCCCCCcccccCCceEEcCCCCeeeEEEEEeecCCCCCCCccccCCeeeeEEEEEEecCCCCcee
Q 015529          233 SQNWSATMLKADGPHSDYNAQSREIFKPPVLIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRTNLGEPGR  312 (405)
Q Consensus       233 ~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~l~~~~~d~rqyLf~l~p~~~~~~~~~~~~g~~~lGkLdI~WRs~~Ge~G~  312 (405)
                      .++|++.++||+....+.+....+.......+++|+|+|||||+|+++.+........+|+++||||||.||++|||+||
T Consensus       161 ~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~~~L~P~d~~qylF~l~~~~~~~~~~~~~~~~~~lGkL~I~WRs~~Ge~Gr  240 (249)
T PF06159_consen  161 SPGFKVTDLNWEPSGESSDGEFGGISSGSRPYLQPGDVRQYLFCLTPKPEGAQNDSGADGRTNLGKLDIVWRSNMGERGR  240 (249)
T ss_pred             CCCceeEecccccccccccccccccccCCcceeCCCCEEEEEEEEEECCccccccccccCcceeeEEEEEEECCCCCCce
Confidence            99999999998765433222111111122345789999999999999988443556688999999999999999999999


Q ss_pred             eeeeccccc
Q 015529          313 LQTQQILGT  321 (405)
Q Consensus       313 LqTs~L~~~  321 (405)
                      |||++|+|+
T Consensus       241 LqT~~L~rr  249 (249)
T PF06159_consen  241 LQTSQLQRR  249 (249)
T ss_pred             eehhhcccC
Confidence            999999874

>PF07919 Gryzun: Gryzun, putative trafficking through Golgi; InterPro: IPR012880 The proteins featured in this family are all hypothetical eukaryotic proteins of unknown function

Probab=99.46  E-value=8.6e-11  Score=124.54  Aligned_cols=297  Identities=15%  Similarity=0.172  Sum_probs=195.2

Q ss_pred             ccccccccceeeccceEEEEEEecCCCcceeeEEEEEEEeC--------C-Cceee-c--cC-------CCCCCccccCC
Q 015529           88 LVLPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQT--------D-KQRIL-L--LD-------TSKSPVESIRA  148 (405)
Q Consensus        88 L~LP~sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT--------~-s~r~~-L--~~-------~~~~~~~~L~p  148 (405)
                      +.+|..-+-+|+||.+.--|.+.|........ .+.+.++-        . ..... .  .+       ....++..|++
T Consensus       177 I~~~~~~~~~l~gE~~~i~i~I~n~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~l~~  255 (554)
T PF07919_consen  177 IKLPNHKPPALTGEFYPIPITISNNEDEEASG-VLEVRLLHPSQLGVSSEETEDLSQVNWDSDKDDEPLFLGIPLGELAP  255 (554)
T ss_pred             EEeCCCCCCeEcCCEEEEEEEEEcCCCcccee-EEEEEEecccccccccccCccceecccccccccchhccCcccccCCC
Confidence            45567888999999999999999998665444 33444440        0 11110 0  00       01123567899


Q ss_pred             CCeeeEEEEEeccccCceEEEEEEEEEc--C--CCcccccceeeeEEeeCCe----EEeEEEEE----------------
Q 015529          149 GGRYDFIVEHDVKELGAHTLVCTALYSD--G--EGERKYLPQFFKFIVSNPL----SVRTKVRV----------------  204 (405)
Q Consensus       149 g~~ld~iv~helKE~G~HiLvc~V~Y~~--~--~Ge~~~frK~fkF~v~~PL----~VkTK~~~----------------  204 (405)
                      |++....+.......|.+.|.+++.|..  .  .+-.-+-.+-+++.+.+||    ++.++++.                
T Consensus       256 ~~s~~~~l~i~~~~~~~~~L~i~~~Y~l~~~~~~~~~i~~~~~~~l~~~~PF~~~y~~~~~~~~~~~~~p~~f~~~~~~~  335 (554)
T PF07919_consen  256 GSSITVTLYIRTSRPGEYELSISVSYHLDVESDPETPISKTKTVQLPVINPFEANYDFSPRFHPDPWDMPSPFDVDGSSD  335 (554)
T ss_pred             CCcEEEEEEEEeCCceeEEEEEEEEEEEecCCCCceeEEEeEEEeeeEEcCEEeeeeEEeeeccCCccCCcccccccccc
Confidence            9998888888899999999999999964  2  2223345566999999999    66667752                


Q ss_pred             ------------------eCCeeEEEEEEEecCCccEEEEeEEeeecCCceeeeecCCCCCCCCCCCcccccCCceEEcC
Q 015529          205 ------------------VKEITFLEACIENHTKSNLYMDQVEFEPSQNWSATMLKADGPHSDYNAQSREIFKPPVLIRS  266 (405)
Q Consensus       205 ------------------~~~~~~LEaqlqN~s~~~l~Le~v~lep~~~~~~~~ln~~~~~~~~~~~~~~~~~~~~l~~~  266 (405)
                                        .+.+++|.+.+++.+..+|.++++.|+-.................  .+ .    .. ..++
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~s~a~~~L~I~~~~l~~~~~~~~~~~~~~~~~~~--~~-~----~~-~~l~  407 (554)
T PF07919_consen  336 FQTLNPEPLTRDGILSVGLNQPWCLNSDIESFAPEPLEIEDISLEVLSSNGGASCDVSSEDSS--SP-E----SG-TVLQ  407 (554)
T ss_pred             cccccccccccccccccccCCCeEEEccceecCCCceEEEEEEEEEecCCCceeeeecccccc--CC-C----cc-ceeC
Confidence                              134589999999999999999999998765433322111100000  00 0    01 1234


Q ss_pred             CCCeeeEEEEEeecCCCCCCCccccCCeeeeEEEEEEec-CCCCceeeeeeccccc--cCcCCCeEEEEEecCceeEeCC
Q 015529          267 GGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRT-NLGEPGRLQTQQILGT--TITSKEIELNVVEVPSVVGIDK  343 (405)
Q Consensus       267 ~~d~rqyLf~l~p~~~~~~~~~~~~g~~~lGkLdI~WRs-~~Ge~G~LqTs~L~~~--~~~~~dl~l~v~~~P~~v~v~~  343 (405)
                      +++.+.--|++....... ..........+|.+.|.||+ .-+..+...+..+.-.  ......+++.+ +.|....++.
T Consensus       408 ~~~~~~~~f~~~~~~~~~-~~~~~~~~~~~g~~~I~WrR~~~~s~~~~~~t~l~lP~~~v~~~~~~v~~-~~p~~~~~~~  485 (554)
T PF07919_consen  408 PGECREDQFCLRLDVQKL-SLDDRRNVTLLGSLVIKWRRNSSNSSDPVVTTPLPLPRVNVPSSPLRVLA-SVPPSAIVGE  485 (554)
T ss_pred             cccccccccccccccccc-ccccCccceeEEEEEEEEEECCCCCCCceEEEEeecCceEccCCCcEEEE-ecCCccccCc
Confidence            567776666633111110 11112345789999999999 4555566666666432  23455666654 5799999999


Q ss_pred             cEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeEE
Q 015529          344 PFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMW  399 (405)
Q Consensus       344 PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~~  399 (405)
                      ||++.+.|.|+|.+... +.+.|..+  +.|.|.|.--..+- |-|.+.-..-+.-
T Consensus       486 ~~~l~~~I~N~T~~~~~-~~~~me~s--~~F~fsG~k~~~~~-llP~s~~~~~y~l  537 (554)
T PF07919_consen  486 PFTLSYTIENPTNHFQT-FELSMEPS--DDFMFSGPKQTTFS-LLPFSRHTVRYNL  537 (554)
T ss_pred             EEEEEEEEECCCCccEE-EEEEEccC--CCEEEECCCcCceE-ECCCCcEEEEEEE
Confidence            99999999999999998 99999777  45999997654444 6666666554443

The region in question is approximately 150 residues long.

>PF08626 TRAPPC9-Trs120: Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit; InterPro: IPR013935 The trafficking protein particle complex TRAPP is a multi-protein complex needed in the early stages of the secretory pathway

Probab=97.76  E-value=0.0062  Score=71.19  Aligned_cols=295  Identities=16%  Similarity=0.180  Sum_probs=166.5

Q ss_pred             ccccccceeeccceEEEEEEecCCCcceeeEEEEEEEeCC-Cceeecc----------CCC-----CC-----CccccCC
Q 015529           90 LPQAFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTD-KQRILLL----------DTS-----KS-----PVESIRA  148 (405)
Q Consensus        90 LP~sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~-s~r~~L~----------~~~-----~~-----~~~~L~p  148 (405)
                      ++++-=.+|=||+..+.|.+.|.|+.+|..+.+...=-|. .-...+.          +.+     ..     ....|.|
T Consensus       788 l~~~~~mlleGE~~~~~ItL~N~S~~pvd~l~~sf~DS~~~~~~~~l~~k~l~~~e~yelE~~l~~~~~~~i~~~~~I~P  867 (1185)
T PF08626_consen  788 LTQGALMLLEGEKQTFTITLRNTSSVPVDFLSFSFQDSTIEPLQKALSNKDLSPDELYELEWQLFKLPAFRILNKPPIPP  867 (1185)
T ss_pred             CCCcceEEECCcEEEEEEEEEECCccccceEEEEEEeccHHHHhhhhhcccCChhhhhhhhhhhhcCcceeecccCccCC
Confidence            5555556799999999999999999999999888741110 0000110          000     00     0117899


Q ss_pred             CCeeeEEEEEecccc--CceEEEEEEEEEc--CCCccccccee---eeEEeeCCeEEe-EEEEEe---------------
Q 015529          149 GGRYDFIVEHDVKEL--GAHTLVCTALYSD--GEGERKYLPQF---FKFIVSNPLSVR-TKVRVV---------------  205 (405)
Q Consensus       149 g~~ld~iv~helKE~--G~HiLvc~V~Y~~--~~Ge~~~frK~---fkF~v~~PL~Vk-TK~~~~---------------  205 (405)
                      |++..+-++.+-|..  ..+-....+.|..  .+++..+.|++   +...|.+-++|. -.+..+               
T Consensus       868 g~~~~~~~~~~~~~~~~~~~~~~i~l~y~~~~~~~~~~y~Rql~ipl~vtV~~slev~~~dilp~~~~~~~~~~~~~~~~  947 (1185)
T PF08626_consen  868 GESATFTVEVDGKPGPIQLTYADIQLEYGYSGEDSSTFYTRQLSIPLTVTVNPSLEVTRCDILPLNSDSVSSNSDSWISY  947 (1185)
T ss_pred             CCEEEEEEEecCcccccceeeeeEEEEecccCCCCCCCeeEEEEEEEEEEEeceEEEeeeeEEecccccccccCcchhhh
Confidence            999988888766643  2444444567753  33445555555   444444544332 222222               


Q ss_pred             ------------CCeeEEEEEEEecCCccEEEEeEEeeecCCceeee--ecCCCCCCCCCC---Ccccc------cC-Cc
Q 015529          206 ------------KEITFLEACIENHTKSNLYMDQVEFEPSQNWSATM--LKADGPHSDYNA---QSREI------FK-PP  261 (405)
Q Consensus       206 ------------~~~~~LEaqlqN~s~~~l~Le~v~lep~~~~~~~~--ln~~~~~~~~~~---~~~~~------~~-~~  261 (405)
                                  .+-.+|..-|.|....+|.++ +.+  ...+...+  +..    +....   |...+      +. .|
T Consensus       948 ~~~~~~~~~~~~~~~clL~lDlrNsw~~~~~v~-l~~--~~~~~~~~~~I~p----g~t~Ri~vPi~Ri~l~~~~~~~~p 1020 (1185)
T PF08626_consen  948 ITSLKSDVNDDSSDYCLLLLDLRNSWPNPLSVN-LHY--DEDFSSSEITIEP----GHTSRIIVPIKRIYLEDPDFSFKP 1020 (1185)
T ss_pred             hhhhcccccCCCCCeEEEEEEEEecCCCceEEE-EEe--ccCccccceEECC----CCeEEEEEEecccccCCcccccCc
Confidence                        233788999999999988732 111  11222111  111    00000   01111      01 11


Q ss_pred             eEEcCCCCeeeEEEEEeecCCCCCCCccccC----CeeeeEEEEEEecCCCCceeeeeeccc----cc--cCcCCCeEEE
Q 015529          262 VLIRSGGGIHNYLYQLKMLSHGSSSPVKVQG----SNVLGKLQITWRTNLGEPGRLQTQQIL----GT--TITSKEIELN  331 (405)
Q Consensus       262 ~l~~~~~d~rqyLf~l~p~~~~~~~~~~~~g----~~~lGkLdI~WRs~~Ge~G~LqTs~L~----~~--~~~~~dl~l~  331 (405)
                      .  .+....|||+=.   +....+.....+.    ...+-+|...|+...|..|.+.--.+.    ++  ....+++++.
T Consensus      1021 i--p~l~~~rqfv~s---k~s~eee~~~re~FW~RE~ll~~l~~~W~~~~~~~G~i~lR~~irLt~~mv~~L~~~~i~i~ 1095 (1185)
T PF08626_consen 1021 I--PSLSRNRQFVVS---KLSEEEERAMRELFWYREELLSRLKGTWKESSNSSGEIDLRGIIRLTPRMVDILRLDPIQID 1095 (1185)
T ss_pred             C--CCcccCceeEEC---CCCHHHHHHHHHHHHHHHHHHhhcceEEEcCCCCcEEEEcccccccCHHHHHhhccCccceE
Confidence            1  122345676422   2111101011111    256889999999877779977765551    22  2345555544


Q ss_pred             EE--ec-Cc---------eeEeCCcEEEEEEEEeCCCCceecEEEEE--ec------CCCCC-eeEEEEcceeeeeccCC
Q 015529          332 VV--EV-PS---------VVGIDKPFLLKLKLTNQTDKEQGPFEIWL--SQ------NDSDE-EKVVMINGLRIMVTQFG  390 (405)
Q Consensus       332 v~--~~-P~---------~v~v~~PF~~~~~v~N~s~r~m~~l~l~v--~~------~~~~~-~~~~~~~~~~lg~l~p~  390 (405)
                      +.  .. ++         .|.+++.++++++|+|+|++++. +.+..  +.      -++.. ++|.|.+-..+..|+|+
T Consensus      1096 ~~l~~~~~~~~~~~~~~~~v~~~~f~~l~v~i~N~s~~~i~-l~~~~~~~~~~~~~~~~~~~ril~~G~Lq~~l~~l~p~ 1174 (1185)
T PF08626_consen 1096 FSLSDDSDSVKVGESSKFSVQVDEFYTLRVTITNRSSRPIS-LRLQPSLDHQNGNVALDLDRRILWNGSLQQPLPELEPG 1174 (1185)
T ss_pred             EEEcccccccccCcceeEEEecCCcEEEEEEeecCCCCcee-eEeeeeccCCCcccccCcCCeEEEEccCcccccccCCC
Confidence            43  22 22         36799999999999999999987 43222  11      12233 99999999999999999


Q ss_pred             ceeeeee
Q 015529          391 WLIETIF  397 (405)
Q Consensus       391 ~~~~~~~  397 (405)
                      .+.+.=|
T Consensus      1175 ~~~~~~~ 1181 (1185)
T PF08626_consen 1175 ESTEHEL 1181 (1185)
T ss_pred             ceEEEEE
Confidence            9887644

To date, two kinds of TRAPP complexes have been studied, TRAPPI and TRAPP II. These complexes differ in subunit composition []. TRAPP I binds vesicles derived from the endoplasmic reticulum bringing them closer to the acceptor membrane. Trs120 is a subunit specific to the TRAPP II complex [] along with Trs65p and Trs130p(TRAPPC10). It is suggested that Trs120p is required for the stability of the Trs130p subunit, suggesting that these two proteins might interact in some way []. It is likely that there is a complex function for TRAPP II in multiple pathways [].

>PF12735 Trs65: TRAPP trafficking subunit Trs65; InterPro: IPR024662 This family is one of the subunits of the TRAPP Golgi trafficking complex []

Probab=96.12  E-value=0.49  Score=47.48  Aligned_cols=74  Identities=19%  Similarity=0.320  Sum_probs=59.2

Q ss_pred             CeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCC------------------------------------
Q 015529          327 EIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQND------------------------------------  370 (405)
Q Consensus       327 dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~------------------------------------  370 (405)
                      .+.++.. -|..|++|++|+.++.|.|.|+..++ |+|.+.+..                                    
T Consensus       157 gv~~sF~-gp~~V~~Ge~F~w~v~ivN~S~~~r~-L~l~~~~~r~~~~~~~~~~~~~~~~s~~~~~~~~~~~v~~en~~~  234 (306)
T PF12735_consen  157 GVTFSFS-GPSSVKVGEPFSWKVFIVNRSSSPRK-LALYVPPRRRRNDERSNSPPPNPSSSSNLNNKQIADAVTDENIVQ  234 (306)
T ss_pred             CeEEEEe-CCceEecCCeEEEEEEEEECCCCCee-EEEEecCccccccccccCCCCCcccccccccccccccceehhHHH
Confidence            4555543 45899999999999999999999997 999998810                                    


Q ss_pred             -----C----CCeeEEEEcceeeeeccCCceeeeeeEEEEe
Q 015529          371 -----S----DEEKVVMINGLRIMVTQFGWLIETIFMWISL  402 (405)
Q Consensus       371 -----~----~~~~~~~~~~~~lg~l~p~~~~~~~~~~~~~  402 (405)
                           .    .....|.=+-+.+|.|.||...++=.-+|.+
T Consensus       235 ~~~~~~~~~~~~gli~LsnDiriGpL~P~~c~~~eL~fi~l  275 (306)
T PF12735_consen  235 AMQKYSSVEESTGLICLSNDIRIGPLAPGACYSVELRFIAL  275 (306)
T ss_pred             HhhhhcccccCCceEEecccccccccCCCceEEEEEEEEEe
Confidence                 0    2357788889999999999999987766654

TRAPP subunits are found in two different sized complexes, TRAPP I and TRAPP II. While both complexes contain the same seven subunits, Bet3p, Bet5p, Trs20p, Trs23p, Trs31p, Trs33p and Trs85p, with TRAPPC human equivalents, TRAPP II has the additional three subunits ,Trs65p, Trs120p and Trs130p []. While it has been implicated in cell wall biogenesis and stress response, the role of Trs65 in TRAPP II is supported by the findings that the protein co-localises with Trs130p, and deletion of TRS65 in yeast leads to a conditional lethal phenotype if either one of the other TRAPP II-specific subunits is modified []. Furthermore, the trs65 mutant has reduced Ypt31/32p guanine nucleotide exchange, GEF, activity []. Trs65 is also known as killer toxin-resistance protein 11.

>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins

Probab=94.21  E-value=0.35  Score=38.93  Aligned_cols=70  Identities=14%  Similarity=0.233  Sum_probs=50.0

Q ss_pred             CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeEEEE
Q 015529          326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWIS  401 (405)
Q Consensus       326 ~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~~~~  401 (405)
                      .||.+.+...|..+..++++++++.|+|.-+.....+.+.+.-+  ....    ....++.|+||.+...-|.|..
T Consensus         2 pDL~v~~~~~~~~~~~g~~~~i~~~V~N~G~~~~~~~~v~~~~~--~~~~----~~~~i~~L~~g~~~~v~~~~~~   71 (101)
T PF07705_consen    2 PDLTVSITVSPSNVVPGEPVTITVTVKNNGTADAENVTVRLYLD--GNSV----STVTIPSLAPGESETVTFTWTP   71 (101)
T ss_dssp             --EEE-EEEC-SEEETTSEEEEEEEEEE-SSS-BEEEEEEEEET--TEEE----EEEEESEB-TTEEEEEEEEEE-
T ss_pred             CCEEEEEeeCCCcccCCCEEEEEEEEEECCCCCCCCEEEEEEEC--Ccee----ccEEECCcCCCcEEEEEEEEEe
Confidence            57888778899999999999999999999666676788877665  2222    5556689999999988888864

; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.

>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known

Probab=94.11  E-value=0.14  Score=40.46  Aligned_cols=72  Identities=22%  Similarity=0.321  Sum_probs=44.5

Q ss_pred             ccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEeccc---cCceEEEEEEEEE
Q 015529          100 GETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKE---LGAHTLVCTALYS  175 (405)
Q Consensus       100 GETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE---~G~HiLvc~V~Y~  175 (405)
                      ||++...+.+.|.....+.++.+.+++  |..-. . ......+..|.||++...-+.-.+-+   .|.|.+...+.|+
T Consensus         4 G~~~~~~~tv~N~g~~~~~~v~~~l~~--P~GW~-~-~~~~~~~~~l~pG~s~~~~~~V~vp~~a~~G~y~v~~~a~y~   78 (78)
T PF10633_consen    4 GETVTVTLTVTNTGTAPLTNVSLSLSL--PEGWT-V-SASPASVPSLPPGESVTVTFTVTVPADAAPGTYTVTVTARYT   78 (78)
T ss_dssp             TEEEEEEEEEE--SSS-BSS-EEEEE----TTSE-----EEEEE--B-TTSEEEEEEEEEE-TT--SEEEEEEEEEE--
T ss_pred             CCEEEEEEEEEECCCCceeeEEEEEeC--CCCcc-c-cCCccccccCCCCCEEEEEEEEECCCCCCCceEEEEEEEEeC
Confidence            999999999999999999998888776  54332 1 10112245899999887666666643   5999999999995

It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.

>KOG4386 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.28  E-value=0.36  Score=51.52  Aligned_cols=126  Identities=21%  Similarity=0.272  Sum_probs=86.6

Q ss_pred             EEcCCCCeeeEEEEEeecCCCCCCCccccCCeeeeEEEEEEec--CCCCceeeeeeccccccCcCCCeEEEEEe-cCcee
Q 015529          263 LIRSGGGIHNYLYQLKMLSHGSSSPVKVQGSNVLGKLQITWRT--NLGEPGRLQTQQILGTTITSKEIELNVVE-VPSVV  339 (405)
Q Consensus       263 l~~~~~d~rqyLf~l~p~~~~~~~~~~~~g~~~lGkLdI~WRs--~~Ge~G~LqTs~L~~~~~~~~dl~l~v~~-~P~~v  339 (405)
                      ++++-|+...-.||+.--.     ....+|.+..|+.-|.||+  +|-..-...| -+.-.-..-..+-|+|.. +|+.-
T Consensus       631 vilqtgEsasecfclqcps-----lgniEggvatGhyiisWkRtsameNipiitt-VitLphviVe~iPlhvnadlpsfg  704 (809)
T KOG4386|consen  631 VILQTGESASECFCLQCPS-----LGNIEGGVATGHYIISWKRTSAMENIPIITT-VITLPHVIVEAIPLHVNADLPSFG  704 (809)
T ss_pred             hhhhcccceeeeeeEeccc-----cccccCCCccceEEEEEeecccccCCCceee-ecccccceeeeccceeecCCCCcc
Confidence            3455677777788887532     2346789999999999998  4444443332 221111223344455543 78888


Q ss_pred             EeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeE
Q 015529          340 GIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFM  398 (405)
Q Consensus       340 ~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~  398 (405)
                      .|.+|..+...+.|+||-..+ +++.++++  +-|.|.|--.+.+..| ||..-+-...
T Consensus       705 rVReslpvkyhLqnktdlvqd-veisveps--DaFMFSGlkqirlriL-PGteqemlyn  759 (809)
T KOG4386|consen  705 RVRESLPVKYHLQNKTDLVQD-VEISVEPS--DAFMFSGLKQIRLRIL-PGTEQEMLYN  759 (809)
T ss_pred             eecccccEEEEeccccceeee-EEeecccc--hhheecccceEEEEEc-CCCceEEEEE
Confidence            999999999999999999997 99999888  4499988766665544 6666665433

>PF14874 PapD-like: Flagellar-associated PapD-like

Probab=93.09  E-value=1.1  Score=36.86  Aligned_cols=73  Identities=16%  Similarity=0.299  Sum_probs=53.1

Q ss_pred             cccceeeccceEEEEEEecCCCcceeeEEEEEEEeC-CCceeeccCCCCCCccccCCCCeeeEEEEEe-ccccCceEEEE
Q 015529           93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQT-DKQRILLLDTSKSPVESIRAGGRYDFIVEHD-VKELGAHTLVC  170 (405)
Q Consensus        93 sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT-~s~r~~L~~~~~~~~~~L~pg~~ld~iv~he-lKE~G~HiLvc  170 (405)
                      .||++.+|++-+..|.+.|.+..++   ++++.... .+.-+....    ....|+||.+.+.-|.+. -++.|.+.-..
T Consensus        12 dFG~v~~g~~~~~~v~l~N~s~~p~---~f~v~~~~~~~~~~~v~~----~~g~l~PG~~~~~~V~~~~~~~~g~~~~~l   84 (102)
T PF14874_consen   12 DFGNVFVGQTYSRTVTLTNTSSIPA---RFRVRQPESLSSFFSVEP----PSGFLAPGESVELEVTFSPTKPLGDYEGSL   84 (102)
T ss_pred             EeeEEccCCEEEEEEEEEECCCCCE---EEEEEeCCcCCCCEEEEC----CCCEECCCCEEEEEEEEEeCCCCceEEEEE
Confidence            6999999999999999999998874   45555444 223333321    134699999999999999 88889765433


Q ss_pred             EE
Q 015529          171 TA  172 (405)
Q Consensus       171 ~V  172 (405)
                      .|
T Consensus        85 ~i   86 (102)
T PF14874_consen   85 VI   86 (102)
T ss_pred             EE
Confidence            33

>PF07919 Gryzun: Gryzun, putative trafficking through Golgi; InterPro: IPR012880 The proteins featured in this family are all hypothetical eukaryotic proteins of unknown function

Probab=92.98  E-value=11  Score=40.15  Aligned_cols=203  Identities=12%  Similarity=0.165  Sum_probs=110.8

Q ss_pred             CeEEeEEEEE----eCCeeEEEEEEEecCCccEEEEeEEeeecCC-ceeeeecCCC-CCCC--CCCCcccccCCceEEcC
Q 015529          195 PLSVRTKVRV----VKEITFLEACIENHTKSNLYMDQVEFEPSQN-WSATMLKADG-PHSD--YNAQSREIFKPPVLIRS  266 (405)
Q Consensus       195 PL~VkTK~~~----~~~~~~LEaqlqN~s~~~l~Le~v~lep~~~-~~~~~ln~~~-~~~~--~~~~~~~~~~~~~l~~~  266 (405)
                      +|+.+-.|..    ..+.+.+++.|.+....||.+.++++.=+.. +.......+. ....  ........-....|.+.
T Consensus        11 ~l~~~~~F~~~~~~~~~~~~~ql~i~S~~~~pi~~s~l~V~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~l~   90 (554)
T PF07919_consen   11 FLEASVAFSQSEGKVGEPVQFQLSIRSNAPSPIRFSSLKVNFSGSLYPIVISHSDADASSADSSTSSGSPLSGSADLTLS   90 (554)
T ss_pred             cEEEEEEEccCCccCCCeEEEEEEEEcCCCCCEEeeEEEEEeeCCCCCceEeccccccccccCcccccccccCccceEEe
Confidence            3445544543    2566888899999999999999998875543 2222111110 0000  00000001123345566


Q ss_pred             CCCeeeEEEEEeecCCCCCCCccccC-Ceeee----EEEEEEecCCCCce---eeeeecc---------------ccccC
Q 015529          267 GGGIHNYLYQLKMLSHGSSSPVKVQG-SNVLG----KLQITWRTNLGEPG---RLQTQQI---------------LGTTI  323 (405)
Q Consensus       267 ~~d~rqyLf~l~p~~~~~~~~~~~~g-~~~lG----kLdI~WRs~~Ge~G---~LqTs~L---------------~~~~~  323 (405)
                      ||.++.|-|.+.++............ ...+|    .+.+.|+..-+..+   ...++..               .+-.+
T Consensus        91 p~~~kv~~~~~~~~~~~~~g~~~i~sv~L~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~I~p  170 (554)
T PF07919_consen   91 PGQTKVFSFKFVPREQDVSGELEITSVTLQLGSDKFDLTLSWSFESSSSSSSFWWWQSSDGPKSRPIRKPRDQSSIRILP  170 (554)
T ss_pred             ecceEEEEEEEeccccccCCcEEEEEEEEEEecCeEEEEEEeccccccccccccccccCCcceeeeccCCCCCCEEEEEC
Confidence            88898888888877521101111111 23444    45566766522222   1111111               01124


Q ss_pred             cCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceec-EEEEEe--------cCCCCCe---eEEE-------Ecceee
Q 015529          324 TSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGP-FEIWLS--------QNDSDEE---KVVM-------INGLRI  384 (405)
Q Consensus       324 ~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~-l~l~v~--------~~~~~~~---~~~~-------~~~~~l  384 (405)
                      ....+++.+.+.-....+||.+.+.++|.|..++.... +.+.+-        .......   -|.+       ..++++
T Consensus       171 ~pp~v~I~~~~~~~~~l~gE~~~i~i~I~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  250 (554)
T PF07919_consen  171 RPPKVSIKLPNHKPPALTGEFYPIPITISNNEDEEASGVLEVRLLHPSQLGVSSEETEDLSQVNWDSDKDDEPLFLGIPL  250 (554)
T ss_pred             CCCCeEEEeCCCCCCeEcCCEEEEEEEEEcCCCccceeEEEEEEecccccccccccCccceecccccccccchhccCccc
Confidence            45677777755556778999999999999998776652 333333        0111111   2333       568899


Q ss_pred             eeccCCceeeeee
Q 015529          385 MVTQFGWLIETIF  397 (405)
Q Consensus       385 g~l~p~~~~~~~~  397 (405)
                      |.|+++++..-..
T Consensus       251 g~l~~~~s~~~~l  263 (554)
T PF07919_consen  251 GELAPGSSITVTL  263 (554)
T ss_pred             ccCCCCCcEEEEE
Confidence            9999999887653

The region in question is approximately 150 residues long.

>PF00927 Transglut_C: Transglutaminase family, C-terminal ig like domain; InterPro: IPR008958 Synonym(s): Protein-glutamine gamma-glutamyltransferase, Fibrinoligase, TGase Transglutaminases catalyse the post-translational modification of proteins at glutamine residues, with formation of isopeptide bonds

Probab=92.54  E-value=1  Score=37.58  Aligned_cols=63  Identities=10%  Similarity=0.044  Sum_probs=44.1

Q ss_pred             ecCceeEeCCcEEEEEEEEeCCCCceecEEEEE-----ecCCCCCeeEEEEcceeeeeccCCceeeeeeE
Q 015529          334 EVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWL-----SQNDSDEEKVVMINGLRIMVTQFGWLIETIFM  398 (405)
Q Consensus       334 ~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v-----~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~  398 (405)
                      ++++.+.+|++|++.++++|.++..+..+.+.+     ..+.+  ..-+...-...+.|+|+.+...-+.
T Consensus         6 ~~~~~~~vG~d~~v~v~~~N~~~~~l~~v~~~l~~~~v~ytG~--~~~~~~~~~~~~~l~p~~~~~~~~~   73 (107)
T PF00927_consen    6 KLPGDPVVGQDFTVSVSFTNPSSEPLRNVSLNLCAFTVEYTGL--TRDQFKKEKFEVTLKPGETKSVEVT   73 (107)
T ss_dssp             EEESEEBTTSEEEEEEEEEE-SSS-EECEEEEEEEEEEECTTT--EEEEEEEEEEEEEE-TTEEEEEEEE
T ss_pred             EECCCccCCCCEEEEEEEEeCCcCccccceeEEEEEEEEECCc--ccccEeEEEcceeeCCCCEEEEEEE
Confidence            567788899999999999999999977766665     44422  3445556677788999988776543

Members of the transglutaminase family usually have three domains: N-terminal (IPR001102 from INTERPRO), middle (IPR013808 from INTERPRO) and C-terminal. The middle domain is usually well conserved, but family members can display major differences in their N- and C-terminal domains, although their overall structure is conserved []. This entry represents the C-terminal domain found in transglutaminases, which consists of an immunoglobulin-like beta-sandwich consisting of seven strands in two sheets with a Greek key topology. The best known transglutaminase is blood coagulation factor XIII, a plasma tetrameric protein composed of two catalytic A subunits and two non-catalytic B subunits. Factor XIII is responsible for cross-linking fibrin chains, thus stabilising the fibrin clot. Protein-glutamine gamma-glutamyltransferases (2.3.2.13 from EC) are calcium-dependent enzymes that catalyse the cross-linking of proteins by promoting the formation of isopeptide bonds between the gamma-carboxyl group of a glutamine in one polypeptide chain and the epsilon-amino group of a lysine in a second polypeptide chain. TGases also catalyse the conjugation of polyamines to proteins [, ].; GO: 0003810 protein-glutamine gamma-glutamyltransferase activity, 0018149 peptide cross-linking; PDB: 2XZZ_A 1GGY_B 1FIE_B 1GGU_B 1GGT_B 1F13_A 1QRK_B 1EVU_A 1EX0_B 1L9N_B ....

>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins

Probab=92.15  E-value=1  Score=36.17  Aligned_cols=77  Identities=13%  Similarity=0.204  Sum_probs=54.2

Q ss_pred             cccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEEE
Q 015529           93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA  172 (405)
Q Consensus        93 sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~V  172 (405)
                      +-+.++.|+.+...+.|.|.......++.++..+  ...-+   .  ...+..|+||++....+.+...+.|.|.+.+.|
T Consensus        11 ~~~~~~~g~~~~i~~~V~N~G~~~~~~~~v~~~~--~~~~~---~--~~~i~~L~~g~~~~v~~~~~~~~~G~~~i~~~i   83 (101)
T PF07705_consen   11 SPSNVVPGEPVTITVTVKNNGTADAENVTVRLYL--DGNSV---S--TVTIPSLAPGESETVTFTWTPPSPGSYTIRVVI   83 (101)
T ss_dssp             C-SEEETTSEEEEEEEEEE-SSS-BEEEEEEEEE--TTEEE---E--EEEESEB-TTEEEEEEEEEE-SS-CEEEEEEEE
T ss_pred             CCCcccCCCEEEEEEEEEECCCCCCCCEEEEEEE--CCcee---c--cEEECCcCCCcEEEEEEEEEeCCCCeEEEEEEE
Confidence            3456899999999999999988888888777533  22222   1  122568999999999999999999999999988


Q ss_pred             EEEc
Q 015529          173 LYSD  176 (405)
Q Consensus       173 ~Y~~  176 (405)
                      .+..
T Consensus        84 D~~n   87 (101)
T PF07705_consen   84 DPDN   87 (101)
T ss_dssp             STTT
T ss_pred             eeCC
Confidence            6643

; PDB: 2KUT_A 2L0D_A 3IDU_A 2KL6_A.

>PF00207 A2M: Alpha-2-macroglobulin family; InterPro: IPR001599 This entry contains serum complement C3 and C4 precursors and alpha-macrogrobulins

Probab=86.41  E-value=3.5  Score=33.54  Aligned_cols=44  Identities=18%  Similarity=0.249  Sum_probs=32.9

Q ss_pred             ccCcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEE
Q 015529          321 TTITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWL  366 (405)
Q Consensus       321 ~~~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v  366 (405)
                      .....+++.+.+ ++|..++.|+.+.+.+.|.|++++.+. +.|.|
T Consensus        49 ~~~v~~p~~i~~-~lP~~l~~GD~~~i~v~v~N~~~~~~~-v~V~l   92 (92)
T PF00207_consen   49 EITVFKPFFIQL-NLPRSLRRGDQIQIPVTVFNYTDKDQE-VTVTL   92 (92)
T ss_dssp             EEEEB-SEEEEE-E--SEEETTSEEEEEEEEEE-SSS-EE-EEEEE
T ss_pred             EEEEEeeEEEEc-CCCcEEecCCEEEEEEEEEeCCCCCEE-EEEEC
Confidence            345677888885 899999999999999999999999986 77654

The alpha-macroglobulin (aM) family of proteins includes protease inhibitors [], typified by the human tetrameric a2-macroglobulin (a2M); they belong to the MEROPS proteinase inhibitor family I39, clan IL. These protease inhibitors share several defining properties, which include (i) the ability to inhibit proteases from all catalytic classes, (ii) the presence of a 'bait region' and a thiol ester, (iii) a similar protease inhibitory mechanism and (iv) the inactivation of the inhibitory capacity by reaction of the thiol ester with small primary amines. aM protease inhibitors inhibit by steric hindrance []. The mechanism involves protease cleavage of the bait region, a segment of the aM that is particularly susceptible to proteolytic cleavage, which initiates a conformational change such that the aM collapses about the protease. In the resulting aM-protease complex, the active site of the protease is sterically shielded, thus substantially decreasing access to protein substrates. Two additional events occur as a consequence of bait region cleavage, namely (i) the h-cysteinyl-g-glutamyl thiol ester becomes highly reactive and (ii) a major conformational change exposes a conserved COOH-terminal receptor binding domain [] (RBD). RBD exposure allows the aM protease complex to bind to clearance receptors and be removed from circulation []. Tetrameric, dimeric, and, more recently, monomeric aM protease inhibitors have been identified [, ].; GO: 0004866 endopeptidase inhibitor activity; PDB: 3KLS_B 3PRX_C 3KM9_B 3PVM_C 3CU7_A 4E0S_A 4A5W_A 2PN5_A 3FRP_G 3HRZ_B ....

>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known

Probab=84.35  E-value=2.6  Score=33.15  Aligned_cols=56  Identities=14%  Similarity=0.054  Sum_probs=32.6

Q ss_pred             EeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeE
Q 015529          340 GIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFM  398 (405)
Q Consensus       340 ~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~  398 (405)
                      .-|+++++++.|+|..+..+..+.+.+.--  +.|. .......+..|+||.+...-|.
T Consensus         2 ~~G~~~~~~~tv~N~g~~~~~~v~~~l~~P--~GW~-~~~~~~~~~~l~pG~s~~~~~~   57 (78)
T PF10633_consen    2 TPGETVTVTLTVTNTGTAPLTNVSLSLSLP--EGWT-VSASPASVPSLPPGESVTVTFT   57 (78)
T ss_dssp             -TTEEEEEEEEEE--SSS-BSS-EEEEE----TTSE----EEEEE--B-TTSEEEEEEE
T ss_pred             CCCCEEEEEEEEEECCCCceeeEEEEEeCC--CCcc-ccCCccccccCCCCCEEEEEEE
Confidence            458899999999999777665677777543  3466 4556667779999998876554

It is found on proteins which are bacterial galactosidases [].; PDB: 1EUT_A 2BZD_A 1WCQ_C 2BER_A 1W8O_A 1EUU_A 1W8N_A.

>PF05753 TRAP_beta: Translocon-associated protein beta (TRAPB); InterPro: IPR008856 This family consists of several eukaryotic translocon-associated protein beta (TRAPB) or signal sequence receptor beta subunit (SSR-beta) proteins

Probab=84.11  E-value=7  Score=36.42  Aligned_cols=82  Identities=21%  Similarity=0.215  Sum_probs=62.1

Q ss_pred             eeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCC-CCCccccCCCCeeeEEEEEeccccCceEE-EEEEEEE
Q 015529           98 YLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTS-KSPVESIRAGGRYDFIVEHDVKELGAHTL-VCTALYS  175 (405)
Q Consensus        98 ylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~-~~~~~~L~pg~~ld~iv~helKE~G~HiL-vc~V~Y~  175 (405)
                      -.|+.....+.+-|.-+.++.||.|.-+= -++..+.|.... ......|.||+++..++.=.=+..|.|.+ ...|+|+
T Consensus        35 v~g~~v~V~~~iyN~G~~~A~dV~l~D~~-fp~~~F~lvsG~~s~~~~~i~pg~~vsh~~vv~p~~~G~f~~~~a~VtY~  113 (181)
T PF05753_consen   35 VEGEDVTVTYTIYNVGSSAAYDVKLTDDS-FPPEDFELVSGSLSASWERIPPGENVSHSYVVRPKKSGYFNFTPAVVTYR  113 (181)
T ss_pred             cCCcEEEEEEEEEECCCCeEEEEEEECCC-CCccccEeccCceEEEEEEECCCCeEEEEEEEeeeeeEEEEccCEEEEEE
Confidence            45999999999999999999999997721 144555553321 12356899999888777777789999988 5679999


Q ss_pred             cCCCc
Q 015529          176 DGEGE  180 (405)
Q Consensus       176 ~~~Ge  180 (405)
                      +..|.
T Consensus       114 ~~~~~  118 (181)
T PF05753_consen  114 DSEGA  118 (181)
T ss_pred             CCCCC
Confidence            87663

The normal translocation of nascent polypeptides into the lumen of the endoplasmic reticulum (ER) is thought to be aided in part by a translocon-associated protein (TRAP) complex consisting of 4 protein subunits. The association of mature proteins with the ER and Golgi, or other intracellular locales, such as lysosomes, depends on the initial targeting of the nascent polypeptide to the ER membrane. A similar scenario must also exist for proteins destined for secretion [].; GO: 0005783 endoplasmic reticulum, 0016021 integral to membrane

>PF11797 DUF3324: Protein of unknown function C-terminal (DUF3324); InterPro: IPR021759 This family consists of several hypothetical bacterial proteins of unknown function

Probab=82.49  E-value=7.4  Score=34.47  Aligned_cols=92  Identities=13%  Similarity=0.185  Sum_probs=67.2

Q ss_pred             cceeecc---ceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEe--ccccCceEEE
Q 015529           95 GAIYLGE---TFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHD--VKELGAHTLV  169 (405)
Q Consensus        95 G~iylGE---TFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~he--lKE~G~HiLv  169 (405)
                      +++-+|+   ...-.+.+.|....-+.++.+++++.-..+.-.++... .....++|+..+++-|..+  -=..|.|.|.
T Consensus        33 ~~v~~~~~n~~~~i~~~l~N~~~~~l~~~~v~a~V~~~~~~k~~~~~~-~~~~~mAPNS~f~~~i~~~~~~lk~G~Y~l~  111 (140)
T PF11797_consen   33 GKVKPGQINGRNVIQANLQNPQPAILKKLTVDAKVTKKGSKKVLYTFK-KENMQMAPNSNFNFPIPLGGKKLKPGKYTLK  111 (140)
T ss_pred             eeeeeeEECCeeEEEEEEECCCchhhcCcEEEEEEEECCCCeEEEEee-ccCCEECCCCeEEeEecCCCcCccCCEEEEE
Confidence            4454554   55566778999999999999999999998755554322 2346789999999988875  4456999999


Q ss_pred             EEEEEEcCCCcccccceeeeE
Q 015529          170 CTALYSDGEGERKYLPQFFKF  190 (405)
Q Consensus       170 c~V~Y~~~~Ge~~~frK~fkF  190 (405)
                      .++.+.+   +...|.|-|+-
T Consensus       112 ~~~~~~~---~~W~f~k~F~I  129 (140)
T PF11797_consen  112 ITAKSGK---KTWTFTKDFTI  129 (140)
T ss_pred             EEEEcCC---cEEEEEEEEEE
Confidence            9987643   35667665553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	405
2qsv_A	220	Uncharacterized protein; MCSG, structural genomics	90.58
2ys4_A	122	Hydrocephalus-inducing protein homolog; hydin, PAP	88.71
2xzz_A	102	Protein-glutamine gamma-glutamyltransferase K; 2.3	83.85
3idu_A	127	Uncharacterized protein; all beta-protein, structu	81.67

>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}

Probab=90.58  E-value=8.4  Score=35.01  Aligned_cols=127  Identities=13%  Similarity=0.088  Sum_probs=82.6

Q ss_pred             cccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEEEEecccc---CceEEE
Q 015529           93 AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKEL---GAHTLV  169 (405)
Q Consensus        93 sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~---G~HiLv  169 (405)
                      .||.+-.|++=...+.+.|.++++++-..++    .++- ... .   .....|+||+.-+..+.|+-+..   |.+.=.
T Consensus        11 dFg~v~~g~~~~~~~~i~N~g~~pl~i~~~~----~p~~-~~~-~---~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~   81 (220)
T 2qsv_A           11 LFPISMPEDEGVVRLVVNNTDESDLQVAVVS----LPSF-VSL-D---DRAFRLQAREPRELNLSLAVPRNMPPGMKDEP   81 (220)
T ss_dssp             ECCSBCTTCCCEEEEEEEECSSSCEEEEEEE----CCTT-EEC-S---CCEEEECSSSCEEEEEEECCCTTCCSEEEEEE
T ss_pred             EcccccCCCcceEEEEEEeCCCCceEEEecc----CCCc-eEe-e---eCcceeCCCCceEEEEEEcchhcccCCceeeE
Confidence            6999999999999999999999988765443    2332 111 1   12367999999999999999886   655555


Q ss_pred             EEEEEEcC-CCcccccceeeeEEeeC-----------CeEEeEEEE---Ee-CCeeEEEEEEEecCCccEEEEeEE
Q 015529          170 CTALYSDG-EGERKYLPQFFKFIVSN-----------PLSVRTKVR---VV-KEITFLEACIENHTKSNLYMDQVE  229 (405)
Q Consensus       170 c~V~Y~~~-~Ge~~~frK~fkF~v~~-----------PL~VkTK~~---~~-~~~~~LEaqlqN~s~~~l~Le~v~  229 (405)
                      ++|...++ +++...-+=..+..+..           -+.+. ..+   .+ .+..--+..+.|+++.||.|.+|.
T Consensus        82 i~v~~~~~~~~~~~~~~i~v~g~v~p~~~~~~~~~~~~i~~~-~~~dfG~i~g~~~~~~f~i~N~G~~pL~I~~v~  156 (220)
T 2qsv_A           82 LVLEVTSPETGKKAVDSVMVSLPLVDNFPALTAAQTGVMELS-TYLDMGQLDGETTKAAIEIRNVGAGPLRLHSVT  156 (220)
T ss_dssp             EEEEEECTTTCCEEEEEEEEEEEECCCGGGCCGGGCCCEECC-CEEEEEECTTSCEEEEEEEEECSSSCEEEEEEE
T ss_pred             EEEEEEcCCCCcccccEEEEEEEEcccchhhhhccCCEEEEE-eEEeeeccCCCeEEEEEEEEECCCCCEEEEEEE
Confidence            66665542 22211111112222211           13444 333   23 345667899999999999999996

>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.71  E-value=2.8  Score=34.56  Aligned_cols=86  Identities=15%  Similarity=0.244  Sum_probs=64.5

Q ss_pred             CCccCCCccccccc--cccceeeccceEEEEEEecCCCcceeeEEEEEEEeCCCceeeccCCCCCCccccCCCCeeeEEE
Q 015529           79 ADSIGLSGLLVLPQ--AFGAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDKQRILLLDTSKSPVESIRAGGRYDFIV  156 (405)
Q Consensus        79 ~~~~~ls~~L~LP~--sFG~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv  156 (405)
                      ..+.+.-+.|.+|+  .||..-+|++=...|.+.|.+..+++   ++  +..++ .+....    ....|.||+..+..|
T Consensus        17 l~a~~~~~~l~~p~~l~fg~~~v~~~~~~~~~l~N~g~~~~~---f~--~~~~~-~F~i~P----~~g~L~pg~~~~i~V   86 (122)
T 2ys4_A           17 IKARGARAILDFPDKLNFSTCPVKYSTQKILLVRNIGNKNAV---FH--IKTCR-PFSIEP----AIGTLNVGESMQLEV   86 (122)
T ss_dssp             SCCCSCCCCCCCCSEECCCSEESSSCEEEEEEEECCSSSCEE---EE--EECCT-TEEEES----SEEEECTTCEEEEEE
T ss_pred             EEEEcCCcEECCCCeeecCCeecCCeEEEEEEEEECCCCCEE---EE--EecCC-CeEEEC----CcCEECCCCEEEEEE
Confidence            45556667888886  89999999999999999999887554   22  33322 233322    136899999999999


Q ss_pred             EEeccccCceEEEEEEEE
Q 015529          157 EHDVKELGAHTLVCTALY  174 (405)
Q Consensus       157 ~helKE~G~HiLvc~V~Y  174 (405)
                      .|.=++.|.|.-.-.+.|
T Consensus        87 ~F~P~~~g~~~~~l~v~~  104 (122)
T 2ys4_A           87 EFEPQSVGDHSGRLIVCY  104 (122)
T ss_dssp             EECCSSSBCCCCBCEEEE
T ss_pred             EEEcCCCccEEEEEEEEE
Confidence            999999999966555556

>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}

Probab=83.85  E-value=3.2  Score=33.83  Aligned_cols=71  Identities=17%  Similarity=0.158  Sum_probs=58.0

Q ss_pred             cceeeccceEEEEEEecCCCcceeeEEEEEEEeCCC--ceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEEE
Q 015529           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQTDK--QRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA  172 (405)
Q Consensus        95 G~iylGETFs~yisv~N~s~~~v~~V~ikaelQT~s--~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~V  172 (405)
                      |..-+|+.+.+.+++.|-.+.++++..+.+|=--=.  .++.        ...+.||+.+...+.+-=+..|.+.|.+..
T Consensus        14 g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~~~--------~~~v~pg~~~~~~~~~~P~~~G~~~L~a~f   85 (102)
T 2xzz_A           14 GAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILN--------VGDIGGNETVTLRQSFVPVRPGPRQLIASL   85 (102)
T ss_dssp             SCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEEEEEE--------ECCBCTTCEEEEEEEECCCSCSSCCCEEEE
T ss_pred             CCcccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcceEEE--------cCcCCCCCEEEEEEEEecCcccceEEEEEE
Confidence            567889999999999999999999999998843222  2222        245899999999999999999999998875


Q ss_pred             E
Q 015529          173 L  173 (405)
Q Consensus       173 ~  173 (405)
                      +
T Consensus        86 ~   86 (102)
T 2xzz_A           86 D   86 (102)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A

Probab=81.67  E-value=11  Score=31.84  Aligned_cols=70  Identities=13%  Similarity=0.102  Sum_probs=53.3

Q ss_pred             CcCCCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeeeccCCceeeeeeEEE
Q 015529          323 ITSKEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMVTQFGWLIETIFMWI  400 (405)
Q Consensus       323 ~~~~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~l~p~~~~~~~~~~~  400 (405)
                      ...+||.+.+ ..|+.+..+++-+|+++|+|.-......+.|.+.-+  ...  ++-.  .. .|++|.+..--|.|.
T Consensus        14 ~~~pDL~V~i-s~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvn--g~~--v~t~--~v-~La~G~s~tv~f~~~   83 (127)
T 3idu_A           14 FEFPDLTVEI-KGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYIN--GTL--YKNW--TV-SLGPKEEKVLTFNWT   83 (127)
T ss_dssp             CSSCCEEEEE-ESCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEET--TEE--EEEE--EE-EECTTCEEEEEEEEC
T ss_pred             ccCCCeEEEe-cCCCcccCCCEEEEEEEEEECCCCccCCcEEEEEEC--CEE--EeeE--Ee-ccCCCCeEEEEEEEE
Confidence            6688998866 589999999999999999999766666677777655  222  2222  22 499999999999885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	405
d1ex0a2	112	Transglutaminase, two C-terminal domains {Human (H	94.3
d2q3za3	98	Transglutaminase, two C-terminal domains {Human (H	93.91
d1vjja2	115	Transglutaminase, two C-terminal domains {Human (H	93.8
d1vjja3	99	Transglutaminase, two C-terminal domains {Human (H	93.77
d1g0da3	101	Transglutaminase, two C-terminal domains {Red sea	91.81
d1g0da2	112	Transglutaminase, two C-terminal domains {Red sea	91.27
d1ex0a3	100	Transglutaminase, two C-terminal domains {Human (H	89.36
d2q3za2	114	Transglutaminase, two C-terminal domains {Human (H	88.29

>d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Probab=94.30  E-value=0.02  Score=45.78  Aligned_cols=62  Identities=13%  Similarity=0.122  Sum_probs=46.2

Q ss_pred             CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeee------ccCCcee
Q 015529          326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMV------TQFGWLI  393 (405)
Q Consensus       326 ~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~------l~p~~~~  393 (405)
                      .|+++.+. + +.+.+|++|.+.+.++|.|++.-. +.+.++-.   ...|+|..+..+++      |+|+...
T Consensus         1 ~dV~~~~~-~-~~~~iG~df~v~i~~~N~s~~~~~-v~l~l~a~---~v~YtG~~~~~~~~~~~~v~L~p~~~~   68 (112)
T d1ex0a2           1 SNVDMDFE-V-ENAVLGKDFKLSITFRNNSHNRYT-ITAYLSAN---ITFYTGVPKAEFKKETFDVTLEPLSFK   68 (112)
T ss_dssp             CCEEEEEE-E-CCCBTTCCEEEEEEEEECSSSCEE-EEEEEEEE---EECTTSCEEEEEEEEEEEEEECTTEEE
T ss_pred             CceEEEEE-e-cCcccCCCEEEEEEEEECCCCCEE-EEEEEEEE---EEEeCCcCchheEEeeEEEEECCCCEE
Confidence            47888874 5 447799999999999999887764 66666443   37889988888776      5666543

>d2q3za3 b.1.5.1 (A:586-683) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]

Probab=93.91  E-value=0.14  Score=39.88  Aligned_cols=73  Identities=14%  Similarity=0.259  Sum_probs=60.4

Q ss_pred             ccceeeccceEEEEEEecCCCcceeeEEEEEE---EeCCCceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEE
Q 015529           94 FGAIYLGETFCSYISINNSSTLEVRDVVIKAE---IQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC  170 (405)
Q Consensus        94 FG~iylGETFs~yisv~N~s~~~v~~V~ikae---lQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc  170 (405)
                      .|.+.+|+.+.+.+++.|--..++++..+.+|   |+-+..++.+.       ..+.||+.+...+++-=+..|.+.|++
T Consensus         9 ~g~~~vg~~~~v~vsF~NPL~~~L~~c~~~vEG~GL~~~~~~~~~~-------~~v~pg~~~~~~~~~~P~~~G~~~L~a   81 (98)
T d2q3za3           9 LGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIP-------DPVEAGEEVKVRMDLVPLHMGLHKLVV   81 (98)
T ss_dssp             ESCCSSSSCEEEEEEEECCSSSCBCSEEEEEECTTTCSSCEEEEEC-------SCBCTTCEEEEEEEECCCSSSCEEEEE
T ss_pred             CCCcCcCCeEEEEEEEECCCCCchhCEEEEEEcCCcCcCcEEEeCC-------CccCCCCEEEEEEEEEcCCcccEEEEE
Confidence            46788999999999999999999999999998   44444444442       247899999999999999999999998


Q ss_pred             EEE
Q 015529          171 TAL  173 (405)
Q Consensus       171 ~V~  173 (405)
                      ..+
T Consensus        82 ~f~   84 (98)
T d2q3za3          82 NFE   84 (98)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            753

>d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), TGase E3 [TaxId: 9606]

Probab=93.80  E-value=0.035  Score=44.48  Aligned_cols=64  Identities=13%  Similarity=-0.024  Sum_probs=48.9

Q ss_pred             CCeEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeee------ccCCceee
Q 015529          326 KEIELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMV------TQFGWLIE  394 (405)
Q Consensus       326 ~dl~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~------l~p~~~~~  394 (405)
                      +|+.+++ ++.+.+.+|++|.+.+.++|.|++.-. +.+.+.-.   -+.|+|..+.++++      |+|+....
T Consensus         2 ~~v~~~l-kl~~~~~iG~Df~v~l~~~N~s~~~~~-v~l~l~a~---av~YtG~~~~~~~~~~~~v~L~p~~~~~   71 (115)
T d1vjja2           2 PSIIGKL-KVAGMLAVGKEVNLVLLLKNLSRDTKT-VTVNMTAW---TIIYNGTLVHEVWKDSATMSLDPEEEAE   71 (115)
T ss_dssp             CSEEEEE-EECSCCBTTSCEEEEEEEEECSSSCEE-EEEEEEEE---EECTTCCEEEEEEEEEEEEEECTTCEEE
T ss_pred             CCeEEEE-EcCCCCCCCCCEEEEEEEEECCCCCEE-EEEEEEEE---EEEeCCcCchheEEeeEEEEECCCCeEE
Confidence            5677775 566789999999999999999888765 66666443   37899988888765      67776543

>d1vjja3 b.1.5.1 (A:594-692) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), TGase E3 [TaxId: 9606]

Probab=93.77  E-value=0.11  Score=40.43  Aligned_cols=71  Identities=14%  Similarity=0.124  Sum_probs=59.2

Q ss_pred             cceeeccceEEEEEEecCCCcceeeEEEEEE---EeCCCceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEE
Q 015529           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAE---IQTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCT  171 (405)
Q Consensus        95 G~iylGETFs~yisv~N~s~~~v~~V~ikae---lQT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~  171 (405)
                      |...+|+.+.+.+++.|--+.++++..+.+|   |.-+..++.+        ..+.||+.....+.+-=+..|.+.|.+.
T Consensus         9 ~~~~v~~~~~v~vsf~NPL~~~L~~c~f~vEG~GL~~~~~~~~~--------~~v~p~~~~~~~~~~~P~~~G~~~l~a~   80 (99)
T d1vjja3           9 NEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDV--------PTLGPKERSRVRFDILPSRSGTKQLLAD   80 (99)
T ss_dssp             SCCBTTSCEEEEEEEECCSSSCBCSEEEEEECTTTSSSCEEEEE--------CCBCTTCEEEEEEEECCCSCEEEEEEEE
T ss_pred             CCcCcCCeEEEEEEEECCCCCchhCEEEEEEeCCCCCccEEEec--------CccCCCCEEEEEEEEEcCCcccEEEEEE
Confidence            6678999999999999999999999999998   3333333444        3588999999999999999999999887


Q ss_pred             EE
Q 015529          172 AL  173 (405)
Q Consensus       172 V~  173 (405)
                      .+
T Consensus        81 f~   82 (99)
T d1vjja3          81 FS   82 (99)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d1g0da3 b.1.5.1 (A:584-684) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Red sea bream (Chrysophrys major) [TaxId: 143350]

Probab=91.81  E-value=0.21  Score=39.05  Aligned_cols=72  Identities=15%  Similarity=0.208  Sum_probs=58.9

Q ss_pred             ccceeeccceEEEEEEecCCCcceeeEEEEEEE---eCCCceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEE
Q 015529           94 FGAIYLGETFCSYISINNSSTLEVRDVVIKAEI---QTDKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVC  170 (405)
Q Consensus        94 FG~iylGETFs~yisv~N~s~~~v~~V~ikael---QT~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc  170 (405)
                      -|.+.+|+.+.+.+++.|--+.++++..+.+|=   +- .+++..       ...+.||+.+...+.+-=+..|.|.|++
T Consensus         9 ~g~~~v~~~~~v~vsf~NPL~~~L~~c~~~vEG~GL~~-~~~~~~-------~~~v~p~~~~~~~~~~~P~~~G~~~L~a   80 (101)
T d1g0da3           9 PGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLS-ATQIHV-------NGAVAPSGKVSVKLSFSPMRTGVRKLLV   80 (101)
T ss_dssp             CSCEETTCCEEEEEEEECCSSSCEESCEEEEEETTTEE-EEEEEC-------SSEECTTCEEEEEEEECCSSCEEEEEEE
T ss_pred             CCCcCcCCeEEEEEEEECCCCCeecCEEEEEEcCCCCc-ccEEEe-------cCCcCCCCEEEEEEEEEcCCcccEEEEE
Confidence            367889999999999999999999999999983   22 222322       2368999999999999999999999998


Q ss_pred             EEE
Q 015529          171 TAL  173 (405)
Q Consensus       171 ~V~  173 (405)
                      ..+
T Consensus        81 ~f~   83 (101)
T d1g0da3          81 DFD   83 (101)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            753

>d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Red sea bream (Chrysophrys major) [TaxId: 143350]

Probab=91.27  E-value=0.11  Score=41.38  Aligned_cols=60  Identities=7%  Similarity=0.018  Sum_probs=43.7

Q ss_pred             eEEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeeee------ccCCcee
Q 015529          328 IELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIMV------TQFGWLI  393 (405)
Q Consensus       328 l~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg~------l~p~~~~  393 (405)
                      |++++..-| .+ +|++|.+.+.++|+|++... +.+.++-.   .+.|+|..+.++++      |+|+...
T Consensus         2 l~~~ik~~~-~~-~G~Df~v~i~~~N~s~~~~~-v~l~l~a~---~v~YtG~~~~~~~~~~~~v~L~p~~~~   67 (112)
T d1g0da2           2 LQLSIKHAQ-PV-FGTDFDVIVEVKNEGGRDAH-AQLTMLAM---AVTYNSLRRGECQRKTISVTVPAHKAH   67 (112)
T ss_dssp             EEEEEEECC-CB-TTCCEEEEEEEEECSSSCEE-EEEEEEEE---EECTTCBCCCCCCEEEEEEEECTTEEE
T ss_pred             eEEEEeCCC-Cc-cCCCEEEEEEEEECCCCCEE-EEEEEEEE---EEEeCCcCccceeEeeEEEEECCCCeE
Confidence            566665444 33 79999999999999888775 77766543   37899988887776      5666543

>d1ex0a3 b.1.5.1 (A:628-727) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Probab=89.36  E-value=0.65  Score=35.95  Aligned_cols=71  Identities=13%  Similarity=0.164  Sum_probs=58.7

Q ss_pred             cceeeccceEEEEEEecCCCcceeeEEEEEEEeC--CCceeeccCCCCCCccccCCCCeeeEEEEEeccccCceEEEEEE
Q 015529           95 GAIYLGETFCSYISINNSSTLEVRDVVIKAEIQT--DKQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTA  172 (405)
Q Consensus        95 G~iylGETFs~yisv~N~s~~~v~~V~ikaelQT--~s~r~~L~~~~~~~~~~L~pg~~ld~iv~helKE~G~HiLvc~V  172 (405)
                      |...+|+.+.+.+++.|--+.+++|..+.+|=--  ..+++.        ...+.||+.+...+++-=+..|.|.|++..
T Consensus        11 g~~~v~~~~~v~v~F~NPL~~~L~nc~~~vEG~GL~~~~~~~--------~~~v~p~~~~~~~~~~~P~~~G~~~l~a~f   82 (100)
T d1ex0a3          11 GTQVVGSDMTVTVQFTNPLKETLRNVWVHLDGPGVTRPMKKM--------FREIRPNSTVQWEEVCRPWVSGHRKLIASM   82 (100)
T ss_dssp             ECCBTTSCEEEEEEEECCSSSCEEEEEEEEEETTTEEEEEEE--------EEEECTTCEEEEEEEECCSSCEEEEEEEEE
T ss_pred             CCcccCCeEEEEEEEECCCCCchhCEEEEEEcCCCceeeEEe--------cCccCCCCEEEEEEEEecCCcccEEEEEEE
Confidence            6788999999999999999999999999998511  112222        346899999999999999999999999875


Q ss_pred             E
Q 015529          173 L  173 (405)
Q Consensus       173 ~  173 (405)
                      +
T Consensus        83 ~   83 (100)
T d1ex0a3          83 S   83 (100)
T ss_dssp             E
T ss_pred             E
Confidence            3

>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Transglutaminase, two C-terminal domains
family: Transglutaminase, two C-terminal domains
domain: Transglutaminase, two C-terminal domains
species: Human (Homo sapiens), tissue isozyme [TaxId: 9606]

Probab=88.29  E-value=0.2  Score=39.75  Aligned_cols=60  Identities=15%  Similarity=0.035  Sum_probs=43.2

Q ss_pred             EEEEEecCceeEeCCcEEEEEEEEeCCCCceecEEEEEecCCCCCeeEEEEcceeee-------eccCCcee
Q 015529          329 ELNVVEVPSVVGIDKPFLLKLKLTNQTDKEQGPFEIWLSQNDSDEEKVVMINGLRIM-------VTQFGWLI  393 (405)
Q Consensus       329 ~l~v~~~P~~v~v~~PF~~~~~v~N~s~r~m~~l~l~v~~~~~~~~~~~~~~~~~lg-------~l~p~~~~  393 (405)
                      ++.+ ...+.+.+|+.|.+.+.++|+|++.-. +.+.+.-.   .+.|+|..+.+++       .|+|+...
T Consensus         3 ~~~i-k~~~~~~iG~Df~v~~~~~N~s~~~~~-v~l~l~a~---~v~YtG~~~~~~~~k~~~~v~L~p~~~~   69 (114)
T d2q3za2           3 AMRI-RVGQSMNMGSDFDVFAHITNNTAEEYV-CRLLLCAR---TVSYNGILGPECGTKYLLNLTLEPFSEK   69 (114)
T ss_dssp             EEEE-ECCSCCBTTCCEEEEEEEEECSSSCEE-EEEEEEEE---EECTTCCEEEEEEEEEEEEEEECTTEEE
T ss_pred             EEEE-EeCCCCcCCCCEEEEEEEEeCCCCCEE-EEEEEEEE---EEEeCCcCcceeEEecceEEEECCCCEE
Confidence            4443 567888999999999999999887654 66655433   3788887775553       37777654