Citrus Sinensis ID: 015612

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400---
Protein Sequence
MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKFISFCEIMELVPEEELEAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHcHHcHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHccccccccccHccccccccccccccccccccHHHHccccccccccccccccccccEEcccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
mgevsreelplpslferGRKIHQIatesgcdpdavrkgCEVLEKCEDMVgklglfssnetkddistaNLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKFISFCEIMELVPEEELEAVAqakptaftDQRARKIARFKRQRAAESKLQEIKERKerrgrstraaapsapveageedvldddgeEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQlkggeeefSEVVLDERSKKAESWHRDAAIRaqytkpaqpitcATFAQDVLEGRAKVSqahehkhqpmifgpaslvgggltsERERMAAQVfqpmhrlptmsiEEAGLKEMEMMNKWQEMNVKLMEEANSAwykdnrklgtsendnedddddAVQKARAfddwkddnprgagnkkltpcg
Flexible Loop (DISEMBL)
mgevsreelplpslferGRKIHQiatesgcdpdaVRKGCEVLEKCEDMVGKlglfssnetkddistANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKFISFCEIMELVPEEELEAVAqakptaftdqRARKIARFKrqraaesklqeikerkerrgrstraaapsapveageedvlddDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKErqlkggeeefsevvlderskkaesWHRDAAIraqytkpaqpiTCATFAQDVLEGRAKVSQAHehkhqpmifgpaSLVGGGLTSERERMAAqvfqpmhrlptMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRklgtsendneddddDAVQKArafddwkddnprgagnkkltpcg
Low Complexity Region (SEG)
MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKFISFCEIMelvpeeeleavaQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPveageedvldddgeeereAWLTTISLAVCKAldllemlkkeedmlSAVKERQLKGGEEEFSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLGTSendnedddddAVQKARAFDDWKDDNPRGAGNKKLTPCG
Disordered region (IsUnstruct)
**********************QIAT**GCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKFISFCEIMELVPEEEL************************************************************************AWLTTISLAVCKALDLLEMLK***************************************AAIRAQYTKPAQPITCATFAQDVLEG****************F**************************************************************************************************************
Disordered Region (DISOPRED)
***********PSLFERGR***************VRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIE*************SQAKLKFISFCEIMELVPEE*********************************************************************EEEREAWLTTISLAVCKALDLLEMLKKE**********************************************************************************ASLV*GGLTSERERMAAQVFQPMHRLPTMSIEEAGLK*******************************************AVQKARAFDDWKDDNPRGAGN****P**
Disordered Region (DISEMBL)
********LPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKFISFCEIMELVPEEELEAVAQAKPTAFTDQRARKIA*************************************************EREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLK**********************RDAAIRAQYTKPAQPITCATFAQDVLEGR**********HQPMIFGPASLVGGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLGT************VQKARAFDDWKDDNPRGA*********
Disordered Region (DISPRO)
*******ELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKFISFCEIMELVPEEELEAVAQ*KPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRG******************VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVK****************************************QPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMN***********************************ARAFDDWKDDNPRGAGNKKL**C*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKFISFCEIMELVPEEELEAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	403	2.2.26 [Sep-21-2011]
Q8LDQ4	405	PP2A regulatory subunit T	yes	no	1.0	0.995	0.698	1e-164
Q9Y7T1	323	Uncharacterized protein C	yes	no	0.751	0.938	0.258	1e-17
P78318	339	Immunoglobulin-binding pr	yes	no	0.466	0.554	0.291	7e-12
Q61249	340	Immunoglobulin-binding pr	yes	no	0.451	0.535	0.276	3e-09
O08836	340	Immunoglobulin-binding pr	no	no	0.451	0.535	0.267	4e-09
Q9QZ29	343	Immunoglobulin-binding pr	no	no	0.406	0.478	0.280	9e-09
Q04372	366	Type 2A phosphatase-assoc	yes	no	0.158	0.174	0.338	9e-06

>sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46 OS=Arabidopsis thaliana GN=TAP46 PE=1 SV=2

 Score =  577 bits (1487), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 283/405 (69%), Positives = 340/405 (83%), Gaps = 2/405 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MG ++ EE+PL  LFE+ RKIH  A+ESG D D V+KGCE+ +KCEDM+GKL LFSSNET
Sbjct: 1   MGGLAMEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELE 119
           K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLK F SFCE MELVP+EELE
Sbjct: 61  KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120

Query: 120 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 179
           A ++    A  D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S PVE+GE+D
Sbjct: 121 ASSRGGSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDD 180

Query: 180 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 239
           + DDD EEEREAWL++I+LA+CKA+DLLEMLK+EE+MLSA+KERQLK GE  FS   LD+
Sbjct: 181 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRDALDD 240

Query: 240 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 299
           R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ HEHK+QP+IFGPAS+V
Sbjct: 241 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIV 300

Query: 300 GGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDN 359
           GG L++ERERM AQVFQP HR+PTM IE+AGL EM +MN WQE   K +EEA ++WY D 
Sbjct: 301 GGPLSTERERMIAQVFQPSHRMPTMCIEDAGLTEMNIMNDWQEQTKKAIEEATTSWYNDK 360

Query: 360 -RKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
             +    + +++D+D++AV KARAFDDWKDDNPRGAGNKKLTPCG
Sbjct: 361 PLRRKEEDEEDDDEDEEAVMKARAFDDWKDDNPRGAGNKKLTPCG 405

Seems to act as a regulator of PP2A catalytic activity.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9Y7T1|YCJ5_SCHPO Uncharacterized protein C63.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC63.05 PE=3 SV=1

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 168/394 (42%), Gaps = 91/394 (23%)

Query: 13  SLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYI 72
           SL E   +  ++   S  D     +  E  EKC  +V +L +FSSNE  D+I T+ L+Y+
Sbjct: 5   SLRELWEETEKLKDSSSTDEKTRSEIVEGYEKCLKLVLQLRIFSSNEEVDEIKTSELRYL 64

Query: 73  LVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELEAVAQAKPTAFTD 131
           ++ Y L + +E+  + DRL+ ++ ++   + F+S C+   L P      +   KP    D
Sbjct: 65  MIDYELAKCVEQWTKGDRLKAVQYAKTHYETFLSICDDYGLKP------MQDEKPKTEAD 118

Query: 132 QRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREA 191
            R  KIAR++ ++  E +L+                A S   E  EE        +ER+ 
Sbjct: 119 TRTLKIARYRMRQNLEKELK----------------ALSKDSETNEE--------QERKF 154

Query: 192 WLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGE--EEFSEVVLDERSKKAE--SW 247
           WLT + +AV   LD L  ++ E D+L   +   +K  +  E+  E +  E  K+ E  SW
Sbjct: 155 WLTKLQIAVEDTLDSLPHIEMEIDLLKRAQAELMKSEDSPEKDEETLRREERKQKEGSSW 214

Query: 248 HRDAAIRAQY----TKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGL 303
             D   R +      +P QP T                                     +
Sbjct: 215 RLDLNTRDKILDKNNRPLQPFT-------------------------------------I 237

Query: 304 TSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLG 363
            S+R      VF   + LPTM+++E   +EM+                N    KDN    
Sbjct: 238 VSDRNETRKNVFGFGYNLPTMTVDEYLDEEMK--------------RGNIISQKDNPPKS 283

Query: 364 TSENDNEDDDDDA-VQKARAFDDWKDDNPRGAGN 396
            S+++++ +  DA   K R +D++K+ NPRG+GN
Sbjct: 284 DSDDEDDYEKLDAKTMKDRYWDEFKEANPRGSGN 317

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P78318|IGBP1_HUMAN Immunoglobulin-binding protein 1 OS=Homo sapiens GN=IGBP1 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 45/233 (19%)

Query: 8   ELP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           +LP LP LFE GR++    ++ATE   S    + V KG ++LEK  +M+ +L LFS NE 
Sbjct: 8   QLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNED 67

Query: 61  KDDISTANLKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFCEIMELVPEEEL 118
            ++I++ +LKY+LVP F G L ++++    RL  L +A +  + +++ C     V E EL
Sbjct: 68  LEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYH-VAEFEL 126

Query: 119 --------------EAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRST 164
                          ++A     A   QR  KI R+K+++  E +L  +K          
Sbjct: 127 PKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMK---------- 176

Query: 165 RAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDML 217
                 + VE+G+      D E  RE +L  +   +  +L+ +E + +E  +L
Sbjct: 177 ------SAVESGQA-----DDERVREYYLLHLQRWIDISLEEIESIDQEIKIL 218

Associated to surface IgM-receptor; may be involved in signal transduction. May be involved in regulation of the catalytic activity of type 2A-related serine/threonine phosphatases.

Homo sapiens (taxid: 9606)

>sp|Q61249|IGBP1_MOUSE Immunoglobulin-binding protein 1 OS=Mus musculus GN=Igbp1 PE=1 SV=1

 Score = 63.5 bits (153), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 42/224 (18%)

Query: 15  FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
           FE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LFS NE  ++I++ +
Sbjct: 17  FETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTD 76

Query: 69  LKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFCEIMELV-----------PE 115
           LKY++VP   G L ++++    RL  L +A +  + F++ C    +             E
Sbjct: 77  LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAE 136

Query: 116 EELEAVAQAKP--TAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPV 173
               + + A P   A   QR  KI R+K+++  E +L  +K                + V
Sbjct: 137 NNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK----------------SAV 180

Query: 174 EAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDML 217
           E+G+      D E  RE  L  +   +  +L+ LE + +E  +L
Sbjct: 181 ESGQA-----DDERVREYHLLHLRRWIAVSLEELESIDQEIKIL 219

Associated to surface IgM-receptor; may be involved in signal transduction. May be involved in regulation of the catalytic activity of type 2A-related serine/threonine phosphatases.

Mus musculus (taxid: 10090)

>sp|O08836|IGBP1_RAT Immunoglobulin-binding protein 1 OS=Rattus norvegicus GN=Igbp1 PE=2 SV=2

 Score = 62.8 bits (151), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 42/224 (18%)

Query: 15  FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
           FE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LFS NE  ++I++ +
Sbjct: 17  FETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASID 76

Query: 69  LKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFCEIMEL----VPEEE----- 117
           LKY++VP   G L ++++    RL  L +A +  + F++ C    +    +P+ +     
Sbjct: 77  LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYHVAEFQLPQTKNNSAE 136

Query: 118 ----LEAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPV 173
                 ++A     A   QR  KI R+K+++  E +L  +K                + V
Sbjct: 137 NNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK----------------SAV 180

Query: 174 EAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDML 217
           E+G+      D E  RE +L  +   +  +L+ +E + +E  +L
Sbjct: 181 ESGQA-----DDERVREYYLLHLRRWIGISLEEIESIDQEIKIL 219

Associated to surface IgM-receptor; may be involved in signal transduction. May be involved in regulation of the catalytic activity of type 2A-related serine/threonine phosphatases.

Rattus norvegicus (taxid: 10116)

>sp|Q9QZ29|IGB1B_MOUSE Immunoglobulin-binding protein 1b OS=Mus musculus GN=Igbp1b PE=2 SV=1

 Score = 61.6 bits (148), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 25/189 (13%)

Query: 28  SGCDP--DAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEK- 84
           +G  P  + VR+  ++LEK  DM+ +L LFS NE  ++I++A+LKY+++P   G L  K 
Sbjct: 34  TGSKPIQEKVREALKLLEKASDMLSQLDLFSRNEDWEEIASADLKYLMLPALKGALTLKL 93

Query: 85  IAQDDRLQILKASQAKLKFISFC------EIMELVPEEELEAVAQAKPTAFTDQRARKIA 138
           +    RL +L+   A+  F++F        + +        +  +  P A +D + + + 
Sbjct: 94  VGSSKRLGLLQ--DAREHFMNFLTQTHSYHVADFQLPWAQSSSMEGNPAATSDAQEQNLV 151

Query: 139 RFKRQRAAESKLQEIKERK--ERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTI 196
               QR  ++K+Q  K++K  E+R  S ++A     VE+G+      D E  RE +L  +
Sbjct: 152 AMASQR--QTKIQRYKQKKAVEQRLSSLKSA-----VESGQA-----DDERVREYYLLQL 199

Query: 197 SLAVCKALD 205
              +  +LD
Sbjct: 200 RRWISISLD 208

Associated to surface IgM-receptor; may be involved in signal transduction (By similarity). May be involved in regulation of the catalytic activity of type 2A-related serine/threonine phosphatases.

Mus musculus (taxid: 10090)

>sp|Q04372|TAP42_YEAST Type 2A phosphatase-associated protein 42 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAP42 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 7/71 (9%)

Query: 48  MVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEK-------IAQDDRLQILKASQAK 100
           +  +L LFS+NET DD+STA++K++ V Y+LG LI +       +AQ   ++++   ++ 
Sbjct: 49  IFDRLALFSTNETIDDVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSMKLIYLKKSV 108

Query: 101 LKFISFCEIME 111
             FI+F  +++
Sbjct: 109 ESFINFLTLLQ 119


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.129    0.367 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,670,485
Number of Sequences: 539616
Number of extensions: 6262480
Number of successful extensions: 26604
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 26015
Number of HSP's gapped (non-prelim): 698
length of query: 403
length of database: 191,569,459
effective HSP length: 120
effective length of query: 283
effective length of database: 126,815,539
effective search space: 35888797537
effective search space used: 35888797537
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)

Involved in negative regulation of the TOR signaling pathway in response to type of available nitrogen source. Inhibitor of PP2A phosphatase SIT4, which results in inhibition of nuclear export of MSN2, due to lack of dephosphorylation by SIT4. Also required for rapamycin induced activation of expression of many nitrogen discrimination pathway (NDP) genes. In complex with PPH21, required for organization of the actin cytoskeletom during the cell cycle via a Rho GTPase-dependent mechanism.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	403
225455360	403	PREDICTED: PP2A regulatory subunit TAP46	0.997	0.997	0.779	1e-179
224120846	405	predicted protein [Populus trichocarpa]	1.0	0.995	0.777	1e-179
356509245	398	PREDICTED: PP2A regulatory subunit TAP46	0.980	0.992	0.759	1e-174
270267863	403	Tap46 [Nicotiana benthamiana]	0.997	0.997	0.759	1e-174
449461893	398	PREDICTED: PP2A regulatory subunit TAP46	0.980	0.992	0.756	1e-172
224132750	401	predicted protein [Populus trichocarpa]	0.985	0.990	0.75	1e-171
356516069	397	PREDICTED: PP2A regulatory subunit TAP46	0.977	0.992	0.741	1e-167
357463963	404	PP2A regulatory subunit TAP46 [Medicago	0.997	0.995	0.728	1e-166
297826027	404	hypothetical protein ARALYDRAFT_901608 [	0.997	0.995	0.706	1e-163
297796125	410	predicted protein [Arabidopsis lyrata su	0.997	0.980	0.695	1e-162

>gi|225455360|ref|XP_002277330.1| PREDICTED: PP2A regulatory subunit TAP46 [Vitis vinifera] gi|302143911|emb|CBI23016.3| unnamed protein product [Vitis vinifera]

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 315/404 (77%), Positives = 354/404 (87%), Gaps = 2/404 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MGE   EE+ L +LFE+ RKIH  A+ESG D DAVRKGCE LEKCE+MV KLGLFSSNET
Sbjct: 1   MGEYKMEEMSLLALFEQARKIHLAASESGADQDAVRKGCEALEKCEEMVSKLGLFSSNET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELE 119
           KDDIST+NLKY+LVP++L EL EKIAQDDR+QILK SQAKLK FISFCE MELVPEEELE
Sbjct: 61  KDDISTSNLKYLLVPFYLAELTEKIAQDDRIQILKVSQAKLKEFISFCEAMELVPEEELE 120

Query: 120 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 179
              Q  P +F D+RA+KIARFKRQRAAESKL EIKERKERRGRST+A+A S PV+ G+ED
Sbjct: 121 TSTQGGPNSFADRRAKKIARFKRQRAAESKLLEIKERKERRGRSTKASALSTPVDTGDED 180

Query: 180 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 239
           VLDDDGEEEREAWLTTISLA+CKA DLLEMLKKEE+MLSA+KE+QL+ G++E S  +LDE
Sbjct: 181 VLDDDGEEEREAWLTTISLALCKAFDLLEMLKKEEEMLSAIKEKQLQEGDKEVSRAILDE 240

Query: 240 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 299
           R+K+ E WHRDAA RAQYTKPA PITCATFAQDVLEGRA VSQ HEHKHQPMIFGPASLV
Sbjct: 241 RAKRTEDWHRDAAARAQYTKPAPPITCATFAQDVLEGRATVSQVHEHKHQPMIFGPASLV 300

Query: 300 GGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDN 359
           GG LT+ERE MAAQVFQP HRLPTMSIEEAGL+EMEMMNKWQE N KL+EEANS+W+K++
Sbjct: 301 GGRLTNEREIMAAQVFQPSHRLPTMSIEEAGLREMEMMNKWQERNAKLIEEANSSWHKES 360

Query: 360 RKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
           RK G SE  +++DDD A +KARA+DDWKDDNPRGAGNKKLTPCG
Sbjct: 361 RKPGPSEE-DDEDDDAAQEKARAWDDWKDDNPRGAGNKKLTPCG 403

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120846|ref|XP_002318432.1| predicted protein [Populus trichocarpa] gi|222859105|gb|EEE96652.1| predicted protein [Populus trichocarpa]

 Score =  632 bits (1630), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 315/405 (77%), Positives = 357/405 (88%), Gaps = 2/405 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGC-DPDAVRKGCEVLEKCEDMVGKLGLFSSNE 59
           MGE+  E++PLPSLF+   KIH  ATESG  D + V+KG E LEKCE+M+ KLGLFSSNE
Sbjct: 1   MGEMKTEDMPLPSLFDEASKIHVKATESGSSDQELVKKGIESLEKCEEMISKLGLFSSNE 60

Query: 60  TKDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEEL 118
           TK+DIST NLKYILVP++L EL EKI QDDR+QILKASQAKLK F+SFCE MELVPEEEL
Sbjct: 61  TKEDISTTNLKYILVPFYLAELAEKITQDDRIQILKASQAKLKEFLSFCEAMELVPEEEL 120

Query: 119 EAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEE 178
           +A +Q  P  F D+RA KIAR+KRQRAAE+KL+EIKE KERRGRST+AAA S PVEAGEE
Sbjct: 121 QASSQGAPNTFVDRRALKIARYKRQRAAEAKLEEIKEWKERRGRSTKAAAVSTPVEAGEE 180

Query: 179 DVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLD 238
           DVLDDDGEEEREAW+TTISLA+CKA+DLLEMLKKEE+ML AVKERQLK G + FS+ +LD
Sbjct: 181 DVLDDDGEEEREAWITTISLAICKAIDLLEMLKKEEEMLLAVKERQLKEGGKAFSQTILD 240

Query: 239 ERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASL 298
           ER+KKAE+WHRDAA++A+YT+PAQPITCATFAQDVLEGRAKVSQAH+HKH P+ FGPASL
Sbjct: 241 ERAKKAENWHRDAAVKARYTQPAQPITCATFAQDVLEGRAKVSQAHDHKHVPITFGPASL 300

Query: 299 VGGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKD 358
           VGG LTSERERM AQVFQP HRLPTMSIEEAGLKEME+MNKWQE N +LMEEANSAWYKD
Sbjct: 301 VGGSLTSERERMRAQVFQPGHRLPTMSIEEAGLKEMEIMNKWQERNAELMEEANSAWYKD 360

Query: 359 NRKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
           N K   SE D+++DDD AVQKARA+DDWKDD+PRGAGNKKLTPCG
Sbjct: 361 NPKSKLSEEDDDEDDDAAVQKARAWDDWKDDHPRGAGNKKLTPCG 405

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509245|ref|XP_003523361.1| PREDICTED: PP2A regulatory subunit TAP46-like [Glycine max]

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 303/399 (75%), Positives = 350/399 (87%), Gaps = 4/399 (1%)

Query: 7   EELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDIST 66
           +++PLP+LFE+ RKIH  AT+SG D + V+KGCE L +CEDMV  LGLFS NETK+DIST
Sbjct: 2   DDMPLPALFEQARKIHAAATDSGADQEVVKKGCEALHRCEDMVNNLGLFSPNETKEDIST 61

Query: 67  ANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELEAVAQAK 125
            NLKYILVP++L EL EKIAQDDR+QILK+SQAKLK FISFCE MELVP+EELE+     
Sbjct: 62  TNLKYILVPFYLAELTEKIAQDDRIQILKSSQAKLKEFISFCEAMELVPKEELESYIDGA 121

Query: 126 PTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDG 185
           P    DQRARKIARFKRQRAAESKL EIKERKERRGRST+AAA S PVEAGEE+VLDDDG
Sbjct: 122 PKTVADQRARKIARFKRQRAAESKLLEIKERKERRGRSTKAAALSTPVEAGEEEVLDDDG 181

Query: 186 EEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKAE 245
           EEEREAW+TTISLA+CKALD+L+MLKKEE+MLSAVK+RQ K G++EFS+ VLDER+KKAE
Sbjct: 182 EEEREAWITTISLAICKALDMLDMLKKEEEMLSAVKDRQSKDGDKEFSKDVLDERAKKAE 241

Query: 246 SWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTS 305
           +WHRD+A+RAQYT+P+ PITCATFAQDVLEGRAK SQ H+HKHQP+IFGPASLV G +T+
Sbjct: 242 AWHRDSAVRAQYTRPSPPITCATFAQDVLEGRAKASQEHDHKHQPLIFGPASLVNGNITT 301

Query: 306 ERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNR-KLGT 364
           ERERMAAQVFQP HR+PTMSIEEAGLKEME+MNKWQE NVKLMEE NS+W+ D + KLG 
Sbjct: 302 ERERMAAQVFQPSHRMPTMSIEEAGLKEMEIMNKWQERNVKLMEEVNSSWHNDRKSKLGE 361

Query: 365 SENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
            ++D +  DD A +KARA+DDWKDDNPRGAGNKKLTPCG
Sbjct: 362 DDDDED--DDAAQEKARAWDDWKDDNPRGAGNKKLTPCG 398

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|270267863|gb|ACZ65511.1| Tap46 [Nicotiana benthamiana]

 Score =  616 bits (1588), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 307/404 (75%), Positives = 350/404 (86%), Gaps = 2/404 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MGE+S +E+PLP+LFE+G KIH  A ES  D D VRKGCE+L +CE+M+GKLGLFS NET
Sbjct: 1   MGELSMQEMPLPALFEQGSKIHASA-ESSVDQDTVRKGCEILRQCEEMIGKLGLFSVNET 59

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELE 119
           K+DISTANLKYILVPY+L EL EK+A +DR+++LKASQAKLK FISFCE MELVPEEE+E
Sbjct: 60  KEDISTANLKYILVPYYLAELTEKVADNDRIKVLKASQAKLKEFISFCETMELVPEEEIE 119

Query: 120 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 179
              Q    +  D+RA+KIARFKRQRAAESKL EIKERKERRGRST+AAA S+PVE  E+D
Sbjct: 120 TSTQGGANSSVDRRAKKIARFKRQRAAESKLLEIKERKERRGRSTKAAALSSPVETEEDD 179

Query: 180 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 239
           VLDDDGEEEREAWLTTISL +CKA DLLEMLKKEE++LSAVKE+QL+ GE+EFS+ +LDE
Sbjct: 180 VLDDDGEEEREAWLTTISLGLCKAFDLLEMLKKEEEILSAVKEKQLQNGEKEFSQAILDE 239

Query: 240 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 299
           R+KK E+WHRDAA RA YTKPA PITCATFAQDV+EGRAKVSQAHEHKHQP+IFGPASLV
Sbjct: 240 RTKKVETWHRDAAARAHYTKPAAPITCATFAQDVIEGRAKVSQAHEHKHQPLIFGPASLV 299

Query: 300 GGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDN 359
           G   T+ERE++AAQVFQP +RLPTMSIEEAGL EM MMN+WQE NVKLMEEANS+WYKD 
Sbjct: 300 GRNPTTEREKIAAQVFQPHYRLPTMSIEEAGLTEMNMMNEWQERNVKLMEEANSSWYKDA 359

Query: 360 RKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
            K    E+D EDDDD A  KARA+DDWKDDNPRGAGNKKLTPCG
Sbjct: 360 PKSRPGEDDEEDDDDAAQDKARAWDDWKDDNPRGAGNKKLTPCG 403

Source: Nicotiana benthamiana

Species: Nicotiana benthamiana

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461893|ref|XP_004148676.1| PREDICTED: PP2A regulatory subunit TAP46-like [Cucumis sativus] gi|449517531|ref|XP_004165799.1| PREDICTED: PP2A regulatory subunit TAP46-like [Cucumis sativus]

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 302/399 (75%), Positives = 346/399 (86%), Gaps = 4/399 (1%)

Query: 7   EELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDIST 66
           E+LPLPS+FE+GRKIH  ATES  D DAVRKGCE L KCEDM+GKLGLFS+NETK+DIST
Sbjct: 2   EDLPLPSIFEQGRKIHNAATESALDQDAVRKGCEALRKCEDMIGKLGLFSANETKEDIST 61

Query: 67  ANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELEAVAQAK 125
            NLKYILVP++L EL EKI QDDR+ +L+ASQAKLK FISFCE MELVP+EEL+   +  
Sbjct: 62  GNLKYILVPFYLAELTEKIVQDDRIPLLRASQAKLKEFISFCETMELVPQEELQTFTEG- 120

Query: 126 PTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDG 185
             +  D+RARKIARFKRQ+AAESKL EIKERKERRGRS++A+A SAP+EAGEEDVLDDDG
Sbjct: 121 -NSLADRRARKIARFKRQKAAESKLHEIKERKERRGRSSKASALSAPIEAGEEDVLDDDG 179

Query: 186 EEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKAE 245
           EEEREAWLTTI+LA+CKA DLLEMLKKEE+MLS++KE++ K G + FS  +LD+R K+AE
Sbjct: 180 EEEREAWLTTINLAICKAFDLLEMLKKEEEMLSSIKEKEEKDGNKNFSREILDDRMKRAE 239

Query: 246 SWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTS 305
           +WHRD  +RA+YTKP+ PITCATFAQDVLEGRA VSQAHEHKHQPMIFGPASLV G LTS
Sbjct: 240 AWHRDGVVRARYTKPSPPITCATFAQDVLEGRANVSQAHEHKHQPMIFGPASLVNGPLTS 299

Query: 306 ERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDN-RKLGT 364
           ERER+AAQVFQP  RLPTMSIEEAGL+EMEMMNKWQE   K +EEANSAW+KDN RK G 
Sbjct: 300 ERERLAAQVFQPGFRLPTMSIEEAGLREMEMMNKWQERTAKYIEEANSAWHKDNTRKPGP 359

Query: 365 SENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
           S  D ++DDD A +KARA+DDWKDDNPRGAGNKKLTPCG
Sbjct: 360 SVEDEDEDDDAAQEKARAWDDWKDDNPRGAGNKKLTPCG 398

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132750|ref|XP_002321400.1| predicted protein [Populus trichocarpa] gi|222868396|gb|EEF05527.1| predicted protein [Populus trichocarpa]

 Score =  605 bits (1561), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 300/400 (75%), Positives = 351/400 (87%), Gaps = 3/400 (0%)

Query: 7   EELPLPSLFERGRKIHQIATESGC-DPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDIS 65
           E+LPLPSLF++  KIH  ATESG  D + V+KG E LE CE+M+ KLGLFSSNETK+DIS
Sbjct: 2   EDLPLPSLFDQASKIHLKATESGSNDKELVKKGIEALENCEEMISKLGLFSSNETKEDIS 61

Query: 66  TANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELEAVAQA 124
           T NLKYILVP++L EL E IAQDDR+QILKASQAKLK F+SFCE MELVPEEEL+  +Q 
Sbjct: 62  TTNLKYILVPFYLAELTENIAQDDRIQILKASQAKLKEFLSFCEAMELVPEEELQTFSQG 121

Query: 125 KPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDD 184
            P  F D+RA KIAR++RQ AAE+KL+++KE+KERR  ST+AAA S  VEAGEED+LDDD
Sbjct: 122 TPNTFADRRALKIARYRRQIAAEAKLEKMKEQKERRFHSTKAAAVSTLVEAGEEDLLDDD 181

Query: 185 GEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKA 244
           GEEEREAW+ TISLA+CKA+DLLEMLKKEE+MLS VKERQLKGG++ FS+++LDER+KKA
Sbjct: 182 GEEEREAWIITISLAICKAIDLLEMLKKEEEMLSDVKERQLKGGDKAFSQMILDERAKKA 241

Query: 245 ESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLT 304
           E WHRDAA++A+YT+PA PITCATFAQDVLEGRAKVS+AH+HKH P+ FGPAS+VGG L+
Sbjct: 242 EDWHRDAAVKARYTQPAPPITCATFAQDVLEGRAKVSEAHDHKHLPVTFGPASIVGGSLS 301

Query: 305 SERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLGT 364
           +ERERM AQVFQP HRLPTMSIEEAGLKEME+MNKWQE NVK MEEANSAWYKDN+KL  
Sbjct: 302 NERERMTAQVFQPGHRLPTMSIEEAGLKEMEIMNKWQERNVKFMEEANSAWYKDNQKLKP 361

Query: 365 SENDNEDDDDD-AVQKARAFDDWKDDNPRGAGNKKLTPCG 403
           SE + ++DDDD AV+KARAFDDWKDD+PRGAGNKKLTPCG
Sbjct: 362 SEEEEDEDDDDAAVEKARAFDDWKDDHPRGAGNKKLTPCG 401

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516069|ref|XP_003526719.1| PREDICTED: PP2A regulatory subunit TAP46-like [Glycine max]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 296/399 (74%), Positives = 346/399 (86%), Gaps = 5/399 (1%)

Query: 7   EELPLPSLFERGRKIHQIATESGCDPD-AVRKGCEVLEKCEDMVGKLGLFSSNETKDDIS 65
           E++PLP+LFE+ RKIH  AT +    D  V+KGCE L +CEDMV  LGLFS NETK+DIS
Sbjct: 2   EDVPLPALFEQARKIHNSATATASAADQVVKKGCEALHRCEDMVNNLGLFSPNETKEDIS 61

Query: 66  TANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELEAVAQA 124
           T NLKYILVP++L EL EK+AQDDR+ ILKASQAKLK FISFCE MELVP+EELE+  + 
Sbjct: 62  TTNLKYILVPFYLAELTEKLAQDDRIHILKASQAKLKEFISFCEAMELVPKEELESYIEG 121

Query: 125 KPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDD 184
                 DQRARKIARFKRQRAAESKL EIKE+KERRGRST+AAA S PVEAGEE+VLDDD
Sbjct: 122 ASKTVADQRARKIARFKRQRAAESKLLEIKEQKERRGRSTKAAALSTPVEAGEEEVLDDD 181

Query: 185 GEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDERSKKA 244
           GEEEREAW+TTISLA+CKALDLL+MLKKEE+MLSAVK+RQ K G++EFS+ VLDER+KKA
Sbjct: 182 GEEEREAWITTISLAICKALDLLDMLKKEEEMLSAVKDRQSKDGDKEFSKDVLDERAKKA 241

Query: 245 ESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLT 304
           E+WH D+A+RA+YTKP+ PITCATFAQDVLEGRAK SQAH+HKHQP+IFGPASLV G +T
Sbjct: 242 EAWHHDSAVRARYTKPSSPITCATFAQDVLEGRAKASQAHDHKHQPLIFGPASLVNGNIT 301

Query: 305 SERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLGT 364
           +ERERMAAQVFQP HR+PTMSIEEAGLKEME+MNKWQE NV+LMEEANS+W+ D +   +
Sbjct: 302 TERERMAAQVFQPSHRMPTMSIEEAGLKEMEIMNKWQERNVRLMEEANSSWHNDRK---S 358

Query: 365 SENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
              +++D+DD A +KARA+DDWKDDNPRGAGNK+LTPCG
Sbjct: 359 KPGEDDDEDDAAQEKARAWDDWKDDNPRGAGNKRLTPCG 397

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463963|ref|XP_003602263.1| PP2A regulatory subunit TAP46 [Medicago truncatula] gi|355491311|gb|AES72514.1| PP2A regulatory subunit TAP46 [Medicago truncatula] gi|388516705|gb|AFK46414.1| unknown [Medicago truncatula]

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 295/405 (72%), Positives = 342/405 (84%), Gaps = 3/405 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MGE+  E++PLP+LFE+ RKIH  ATESG D + V+KGCE L KCE+MV +LGLFS+NET
Sbjct: 1   MGEMKMEDMPLPALFEQARKIHATATESGADQELVKKGCEALNKCENMVNRLGLFSANET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELE 119
           K+DIST +LKYILVPY+L EL EKIA DDR+ ILKASQAKLK FISFCE MELVP+EELE
Sbjct: 61  KEDISTTDLKYILVPYYLAELTEKIAHDDRIPILKASQAKLKEFISFCEAMELVPKEELE 120

Query: 120 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 179
           +  Q  P A  DQRA+KIARFKRQ+AAESKL EI ERKERRGRST+AAA S PVEAGEE+
Sbjct: 121 SYMQGVPKAVADQRAKKIARFKRQKAAESKLLEINERKERRGRSTKAAALSTPVEAGEEE 180

Query: 180 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLK-GGEEEFSEVVLD 238
            LDDDGEEEREAW T+ISLA+CKA DLLEM+KKEE+MLSAVK+RQ K  G +EFS+ ++D
Sbjct: 181 QLDDDGEEEREAWNTSISLAICKAFDLLEMIKKEEEMLSAVKDRQSKEDGNQEFSKDIMD 240

Query: 239 ERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASL 298
           ER+KKAE+WHR+AA+RAQYTKP+ PITCATFAQDVLEGRA+ SQAHEHKHQP+IFGP SL
Sbjct: 241 ERAKKAEAWHRNAAVRAQYTKPSPPITCATFAQDVLEGRAQASQAHEHKHQPLIFGPQSL 300

Query: 299 VGGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKD 358
           V G  T+ER RMAAQVFQP HR+PTMSIEEAGLKEME+MN WQE   + +EEANS+W+ D
Sbjct: 301 VNGSFTNERARMAAQVFQPSHRMPTMSIEEAGLKEMEIMNTWQENTARFIEEANSSWHND 360

Query: 359 NRKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
            RK    E + ++DDD A  +ARA DDWKDDNPRGAGN KLTPCG
Sbjct: 361 -RKFKPGEEEEDEDDDAAQDRARALDDWKDDNPRGAGNSKLTPCG 404

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826027|ref|XP_002880896.1| hypothetical protein ARALYDRAFT_901608 [Arabidopsis lyrata subsp. lyrata] gi|297326735|gb|EFH57155.1| hypothetical protein ARALYDRAFT_901608 [Arabidopsis lyrata subsp. lyrata]

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 286/405 (70%), Positives = 344/405 (84%), Gaps = 3/405 (0%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MG +S EELPL +LFE+ RKIH  A+ESG D D V+KGCE+ +KCEDM+GKLGLFSSNET
Sbjct: 1   MGGLSMEELPLSALFEQARKIHLAASESGTDQDVVKKGCEMFQKCEDMIGKLGLFSSNET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEELE 119
           K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLK F SFCE MELVP+EELE
Sbjct: 61  KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120

Query: 120 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 179
           A +++   A  D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S PVE+GEED
Sbjct: 121 ASSRSS-GAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEED 179

Query: 180 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 239
           + DDD EEEREAWL++I+LA+CKA+DLLEMLK+EE+MLSA+KERQLK GE+ FS   LD+
Sbjct: 180 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEDGFSRDALDD 239

Query: 240 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 299
           R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ H+HK+QP+IFGPAS+V
Sbjct: 240 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHDHKNQPLIFGPASIV 299

Query: 300 GGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDN 359
           GG L++ERERM AQVFQP HR+PTM IE+AGL EM +MN WQE   K +EEA ++WY D 
Sbjct: 300 GGPLSTERERMIAQVFQPSHRMPTMCIEDAGLTEMNIMNDWQEQTKKAIEEATTSWYNDK 359

Query: 360 -RKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
             +    + +++D+D++AV KARAFDDWKDDNPRGAGNKKLTPCG
Sbjct: 360 PLRRKEEDEEDDDEDEEAVMKARAFDDWKDDNPRGAGNKKLTPCG 404

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796125|ref|XP_002865947.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297311782|gb|EFH42206.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/411 (69%), Positives = 343/411 (83%), Gaps = 9/411 (2%)

Query: 1   MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
           MG +S EELPL +LFE+ RKIH  A+ESG D D V+KGCE+ +KCEDM+GKLGLFSSNET
Sbjct: 1   MGGLSMEELPLSALFEQARKIHLAASESGTDQDVVKKGCEMFQKCEDMIGKLGLFSSNET 60

Query: 61  KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-------FISFCEIMELV 113
           K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLK       F SFCE MELV
Sbjct: 61  KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKLSFLLSEFFSFCEAMELV 120

Query: 114 PEEELEAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPV 173
           P+EELEA +++   A  D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+AAA S PV
Sbjct: 121 PDEELEASSRSS-GAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKAAALSTPV 179

Query: 174 EAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFS 233
           E+GE+D+ DDD EEEREAWL++I+LA+CKA+DLLEMLK+EE+MLSA+KERQLK GE+ FS
Sbjct: 180 ESGEDDIPDDDSEEEREAWLSSINLAICKAVDLLEMLKREEEMLSAIKERQLKDGEDGFS 239

Query: 234 EVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIF 293
              LD+R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ H+HK+QP+IF
Sbjct: 240 RDALDDRTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHDHKNQPLIF 299

Query: 294 GPASLVGGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANS 353
           GPAS+VGG L++ERERM AQVFQP HR+PTM IE+AGL EM +MN WQE   K +EEA +
Sbjct: 300 GPASIVGGPLSTERERMIAQVFQPSHRMPTMCIEDAGLTEMNIMNDWQEQTKKAIEEATT 359

Query: 354 AWYKDN-RKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
           +WY D   +    + + +D+D++AV KARAFDDWKDDNPRGAGNKKLTPCG
Sbjct: 360 SWYNDKPLRRKEEDEEEDDEDEEAVMKARAFDDWKDDNPRGAGNKKLTPCG 410

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	403
TAIR|locus:2168392	405	TAP46 "2A phosphatase associat	1.0	0.995	0.612	1.8e-126
UNIPROTKB|P78318	339	IGBP1 "Immunoglobulin-binding	0.374	0.445	0.323	6.2e-16
RGD|62011	340	Igbp1 "immunoglobulin (CD79A)	0.382	0.452	0.320	4.1e-14
UNIPROTKB|O08836	340	Igbp1 "Immunoglobulin-binding	0.382	0.452	0.320	4.1e-14
MGI|MGI:1346500	340	Igbp1 "immunoglobulin (CD79A)	0.372	0.441	0.313	5.4e-14
UNIPROTKB|E2QS55	345	IGBP1 "Uncharacterized protein	0.372	0.434	0.302	8.2e-14
UNIPROTKB|A7YY24	338	IGBP1 "Uncharacterized protein	0.372	0.443	0.296	1.3e-13
UNIPROTKB|F6UMY5	390	IGBP1 "Uncharacterized protein	0.372	0.384	0.302	1.5e-13
ZFIN|ZDB-GENE-040426-2928	355	igbp1 "immunoglobulin (CD79A)	0.248	0.281	0.354	1.6e-13
UNIPROTKB|K7GQ35	339	IGBP1 "Uncharacterized protein	0.372	0.442	0.290	2.5e-13

TAIR|locus:2168392 TAP46 "2A phosphatase associated protein of 46 kD" [Arabidopsis thaliana (taxid:3702)]

 Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
 Identities = 248/405 (61%), Positives = 290/405 (71%)

Query:     1 MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
             MG ++ EE+PL  LFE+ RKIH  A+ESG D D V+KGCE+ +KCEDM+GKL LFSSNET
Sbjct:     1 MGGLAMEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNET 60

Query:    61 KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLK-FISFCEIMXXXXXXXXX 119
             K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLK F SFCE M         
Sbjct:    61 KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120

Query:   120 XXXQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPXXXXXXX 179
                +    A  D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S P       
Sbjct:   121 ASSRGGSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDD 180

Query:   180 XXXXXXXXXXXAWLTTISLAVCKAXXXXXXXXXXXXXXSAVKERQLKGGEEEFSEVVLDE 239
                        AWL++I+LA+CKA              SA+KERQLK GE  FS   LD+
Sbjct:   181 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRDALDD 240

Query:   240 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 299
             R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ HEHK+QP+IFGPAS+V
Sbjct:   241 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIV 300

Query:   300 GGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDN 359
             GG L++ERERM AQVFQP HR+PTM IE+AGL EM +MN WQE   K +EEA ++WY D 
Sbjct:   301 GGPLSTERERMIAQVFQPSHRMPTMCIEDAGLTEMNIMNDWQEQTKKAIEEATTSWYNDK 360

Query:   360 R-KLGTSXXXXXXXXXXAVQKARAFDDWKDDNPRGAGNKKLTPCG 403
               +              AV KARAFDDWKDDNPRGAGNKKLTPCG
Sbjct:   361 PLRRKEEDEEDDDEDEEAVMKARAFDDWKDDNPRGAGNKKLTPCG 405

GO:0005737 "cytoplasm" evidence=ISM

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=ISS

GO:0009408 "response to heat" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

UNIPROTKB|P78318 IGBP1 "Immunoglobulin-binding protein 1" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 6.2e-16, Sum P(3) = 6.2e-16
 Identities = 56/173 (32%), Positives = 91/173 (52%)

Query:     8 ELP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
             +LP LP LFE GR++    ++ATE   S    + V KG ++LEK  +M+ +L LFS NE 
Sbjct:     8 QLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNED 67

Query:    61 KDDISTANLKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFC--------EI- 109
              ++I++ +LKY+LVP F G L ++++    RL  L +A +  + +++ C        E+ 
Sbjct:    68 LEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYHVAEFELP 127

Query:   110 --MXXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 158
               M             A P+  A   QR  KI R+K+++  E +L  +K   E
Sbjct:   128 KTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVE 180

GO:0042113 "B cell activation" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0035306 "positive regulation of dephosphorylation" evidence=IEA

GO:0035308 "negative regulation of protein dephosphorylation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005737 "cytoplasm" evidence=NAS

GO:0007165 "signal transduction" evidence=NAS

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IDA

GO:0060632 "regulation of microtubule-based movement" evidence=IMP

GO:0070555 "response to interleukin-1" evidence=IMP

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IMP

GO:0034612 "response to tumor necrosis factor" evidence=IMP

GO:0032873 "negative regulation of stress-activated MAPK cascade" evidence=IMP

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

RGD|62011 Igbp1 "immunoglobulin (CD79A) binding protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 168 (64.2 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
 Identities = 57/178 (32%), Positives = 87/178 (48%)

Query:     5 SREEL--P-LPSLFERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLF 55
             S EEL  P LP LFE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LF
Sbjct:     4 SEEELLLPRLPELFETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLF 63

Query:    56 SSNETKDDISTANLKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFC------ 107
             S NE  ++I++ +LKY++VP   G L ++++    RL  L +A +  + F++ C      
Sbjct:    64 SRNEDLEEIASIDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYHVA 123

Query:   108 -----EIMXXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 158
                  +               A P   A   QR  KI R+K+++  E +L  +K   E
Sbjct:   124 EFQLPQTKNNSAENNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA;ISO

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA;ISO

GO:0032873 "negative regulation of stress-activated MAPK cascade" evidence=IEA;ISO

GO:0034612 "response to tumor necrosis factor" evidence=IEA;ISO

GO:0035306 "positive regulation of dephosphorylation" evidence=IEA;ISO

GO:0035308 "negative regulation of protein dephosphorylation" evidence=IEA;ISO

GO:0042113 "B cell activation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA;ISO

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA;ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0060632 "regulation of microtubule-based movement" evidence=IEA;ISO

GO:0070555 "response to interleukin-1" evidence=IEA;ISO

UNIPROTKB|O08836 Igbp1 "Immunoglobulin-binding protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 168 (64.2 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
 Identities = 57/178 (32%), Positives = 87/178 (48%)

Query:     5 SREEL--P-LPSLFERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLF 55
             S EEL  P LP LFE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LF
Sbjct:     4 SEEELLLPRLPELFETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLF 63

Query:    56 SSNETKDDISTANLKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFC------ 107
             S NE  ++I++ +LKY++VP   G L ++++    RL  L +A +  + F++ C      
Sbjct:    64 SRNEDLEEIASIDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYHVA 123

Query:   108 -----EIMXXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 158
                  +               A P   A   QR  KI R+K+++  E +L  +K   E
Sbjct:   124 EFQLPQTKNNSAENNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IEA

GO:0032873 "negative regulation of stress-activated MAPK cascade" evidence=IEA

GO:0034612 "response to tumor necrosis factor" evidence=IEA

GO:0035306 "positive regulation of dephosphorylation" evidence=IEA

GO:0035308 "negative regulation of protein dephosphorylation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0060632 "regulation of microtubule-based movement" evidence=IEA

GO:0070555 "response to interleukin-1" evidence=IEA

MGI|MGI:1346500 Igbp1 "immunoglobulin (CD79A) binding protein 1" [Mus musculus (taxid:10090)]

 Score = 167 (63.8 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
 Identities = 54/172 (31%), Positives = 84/172 (48%)

Query:     9 LP-LPSLFERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LFS NE  
Sbjct:    10 LPRLPELFETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDL 69

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFC-----------E 108
             ++I++ +LKY++VP   G L ++++    RL  L +A +  + F++ C           +
Sbjct:    70 EEIASTDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQ 129

Query:   109 IMXXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 158
                            A P   A   QR  KI R+K+++  E +L  +K   E
Sbjct:   130 TKTNSAENNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0008601 "protein phosphatase type 2A regulator activity" evidence=ISO

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0031434 "mitogen-activated protein kinase kinase binding" evidence=IPI

GO:0032873 "negative regulation of stress-activated MAPK cascade" evidence=ISO

GO:0034612 "response to tumor necrosis factor" evidence=ISO

GO:0035306 "positive regulation of dephosphorylation" evidence=IMP

GO:0035308 "negative regulation of protein dephosphorylation" evidence=IDA

GO:0042113 "B cell activation" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0043154 "negative regulation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0060632 "regulation of microtubule-based movement" evidence=ISO

GO:0070555 "response to interleukin-1" evidence=ISO

UNIPROTKB|E2QS55 IGBP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 165 (63.1 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
 Identities = 52/172 (30%), Positives = 87/172 (50%)

Query:     9 LP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +++    ++ATE   S    D V KG ++L+K  +M+ +L LFS NE  
Sbjct:    10 LPRLPELFETSKQLLDEVEVATEPTGSRIIQDKVSKGLDLLKKAAEMLSQLDLFSRNEDL 69

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQILK-ASQAKLKFISFCEIMXXX------ 113
             ++I++ +LKY++VP F G L ++++    RL  L+ A +  L +++ C+           
Sbjct:    70 EEIASTDLKYLMVPAFQGALTMKQVNPSKRLDHLEWAREHFLNYLTQCQYYHVAEFELPK 129

Query:   114 -----XXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 158
                            A P+  A   QR  KI R+K+++  E +L  +K   E
Sbjct:   130 TKNNSTDNNTASSSMAYPSLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0009966 "regulation of signal transduction" evidence=IEA

UNIPROTKB|A7YY24 IGBP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 156 (60.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
 Identities = 51/172 (29%), Positives = 85/172 (49%)

Query:     9 LP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +++    +IATE   S    D V KG ++L+K  +M+ +L LFS NE  
Sbjct:    10 LPRLPELFETSKQLLDEVEIATEPTGSRIIQDKVFKGLDLLKKAAEMLSQLELFSQNEDL 69

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQILK-ASQAKLKFISFCEIM--------- 110
             ++I++ +LKY++VP F G   ++++    RL  L+ A +  L +++ C+           
Sbjct:    70 EEIASTDLKYLMVPAFQGAFALKQVNPSKRLDHLQWAREHFLNYLTQCQYYHVAEFELPK 129

Query:   111 --XXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 158
                            A P+  A    R  KI R+K+++  E +L  +K   E
Sbjct:   130 TKTNSAENNTANSSMAYPSIVAMASHRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0009966 "regulation of signal transduction" evidence=IEA

UNIPROTKB|F6UMY5 IGBP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 165 (63.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 52/172 (30%), Positives = 87/172 (50%)

Query:     9 LP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +++    ++ATE   S    D V KG ++L+K  +M+ +L LFS NE  
Sbjct:    10 LPRLPELFETSKQLLDEVEVATEPTGSRIIQDKVSKGLDLLKKAAEMLSQLDLFSRNEDL 69

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQILK-ASQAKLKFISFCEIMXXX------ 113
             ++I++ +LKY++VP F G L ++++    RL  L+ A +  L +++ C+           
Sbjct:    70 EEIASTDLKYLMVPAFQGALTMKQVNPSKRLDHLEWAREHFLNYLTQCQYYHVAEFELPK 129

Query:   114 -----XXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 158
                            A P+  A   QR  KI R+K+++  E +L  +K   E
Sbjct:   130 TKNNSTDNNTASSSMAYPSLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0009966 "regulation of signal transduction" evidence=IEA

ZFIN|ZDB-GENE-040426-2928 igbp1 "immunoglobulin (CD79A) binding protein 1" [Danio rerio (taxid:7955)]

 Score = 131 (51.2 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
 Identities = 39/110 (35%), Positives = 64/110 (58%)

Query:     5 SREELP-LPSLFERGRKI-HQIATE---SGCDPDAVR--KGCEVLEKCEDMVGKLGLFSS 57
             S  + P L  L +RG K+  ++ T    S  +P  V+  +    LE+   MV +L LFS 
Sbjct:    16 SGSDAPKLSDLLDRGWKLFEEVDTTNEPSSSNPVQVKIKRAIMQLEEATRMVNQLNLFSR 75

Query:    58 NETKDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKFISF 106
             NE  ++IST +LKY+L+P  LG L ++++  + RL+ ++A  A++ FI F
Sbjct:    76 NEALEEISTTDLKYLLLPALLGALTMKQVNPNKRLEYVQA--ARVYFIDF 123

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|K7GQ35 IGBP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 153 (58.9 bits), Expect = 2.5e-13, Sum P(3) = 2.5e-13
 Identities = 50/172 (29%), Positives = 86/172 (50%)

Query:     9 LP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETK 61
             LP LP LFE  +++    ++ATE   S    D V KG ++L+K  +M+ +L LFS NE  
Sbjct:    10 LPRLPELFETSKQLLDEVEVATEPTGSRIIQDKVVKGLDLLKKAAEMLSQLDLFSRNEDL 69

Query:    62 DDISTANLKYILVPYFLGEL-IEKIAQDDRLQILK-ASQAKLKFISFCEIM--------- 110
             ++I++ +LKY++VP F G   ++++    RL+ L+ A +    +++ C+           
Sbjct:    70 EEIASTDLKYLMVPAFQGAFALKQVNLSKRLEHLQWAREHFSNYLTQCQYYHVAEFELPK 129

Query:   111 --XXXXXXXXXXXXQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKE 158
                            A P+  A   QR  KI R+K+++  E +L  +K   E
Sbjct:   130 TKTNSAENNTANSSVAYPSLVAMASQRQAKIERYKQKKEVEHRLSALKSAVE 181

GO:0009966 "regulation of signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LDQ4	TAP46_ARATH	No assigned EC number	0.6987	1.0	0.9950	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037249001 SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (403 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	403
pfam04177	335	pfam04177, TAP42, TAP42-like family	7e-81

>gnl|CDD|217940 pfam04177, TAP42, TAP42-like family

 Score =  251 bits (643), Expect = 7e-81
 Identities = 120/398 (30%), Positives = 191/398 (47%), Gaps = 79/398 (19%)

Query: 10  PLPSLFERGRKIH----QIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDIS 65
            L  LF+   K+     + A++S    D V+K  E+LEK   +V +L LFSSNET +DIS
Sbjct: 1   SLSELFDEALKLFDELEESASDSEEYQDKVKKTIELLEKATRLVSQLSLFSSNETLEDIS 60

Query: 66  TANLKYILVPYFLGELIEK-IAQDDRLQILKASQAKLK-FISFCEIMELVPEEELEAVAQ 123
           T++LKY+L+PY+LGEL ++ I   DRL+IL+A++  LK F+S  +  EL+ +E  + + +
Sbjct: 61  TSSLKYLLLPYYLGELTQRLINNSDRLKILEAAKQYLKDFLSRLDDYELLDKELKKLLER 120

Query: 124 AK---------PTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVE 174
            +          +    +R  KIARFKR++  E KL+E+K+R ER               
Sbjct: 121 YESASESSSLELSDPALRRQEKIARFKREKELEEKLKELKKRVERAQD------------ 168

Query: 175 AGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSE 234
                   DD E  RE +L  ++LA+ K+ + LE + +E ++L     R+          
Sbjct: 169 -------SDDEELVRELYLAQLNLAILKSFEELESISQELELLKNRPARKESPESPPAE- 220

Query: 235 VVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFG 294
                                        I   T   D LEG           ++P++  
Sbjct: 221 ------------------------PERLSIDDPTGYTDRLEG---------PLNKPLLSK 247

Query: 295 PASLVGG-GLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANS 353
           P   +    + S R+ +  +VF P + LPTM+++E   +EM+     Q       E A S
Sbjct: 248 PGKPLQPFTILSTRQELQKKVFGPGYPLPTMTVDEYLEQEMKRGGVPQGG----GEAAAS 303

Query: 354 AWYKDNRKLGTSENDNEDDDDDAVQKARAFDDWKDDNP 391
           A  ++       + D+E+DDD+   KARA+D++KDDNP
Sbjct: 304 AEEEE------DDEDDEEDDDEETLKARAWDEFKDDNP 335

The TOR signalling pathway activates a cell-growth program in response to nutrients. TIP41 (pfam04176) interacts with TAP42 and negatively regulates the TOR signaling pathway. Length = 335

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	403
PF04177	340	TAP42: TAP42-like family; InterPro: IPR007304 The	100.0
KOG2830	324	consensus Protein phosphatase 2A-associated protei	100.0

>PF04177 TAP42: TAP42-like family; InterPro: IPR007304 The TOR signalling pathway activates a cell-growth program in response to nutrients []

Probab=100.00  E-value=1e-75  Score=586.34  Aligned_cols=322  Identities=35%  Similarity=0.521  Sum_probs=171.3

Q ss_pred             CHHHHHHHHHHHhh------hhccCCCchHHHHHHHHHHHHHHHHhhhhcCCCCCCCCccccccchhhhhHHHHhhhhhc
Q 015612           10 PLPSLFERGRKIHQ------IATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIE   83 (403)
Q Consensus        10 sL~~lf~~~~~~~~------~~~~s~~~q~~v~~~i~~l~~~~~~v~~l~lFS~NE~leDIsT~~L~yLllpy~lg~L~~   83 (403)
                      ||++||..|+++|.      .+.+|+.||+.|.++|..|++|+.+|+++||||+||+||||+|++|+|||||||||.|+.
T Consensus         1 ~L~~lf~~~~~~~~~le~~~~~~~s~~~q~~v~~~i~~l~~~~~~v~~l~lFS~NE~ledIsT~~LkyLllpy~Lg~L~~   80 (340)
T PF04177_consen    1 SLSELFDEALKLYDELENSSLPSSSPEYQEKVKSAIADLEKAQKMVSQLSLFSSNEELEDISTSDLKYLLLPYYLGELTL   80 (340)
T ss_dssp             -HHHHHHHHHHHHHHCCC-SS-TTSHHHHHHHHHHHHHHHHHHHHHCCCTCCHCSSSCCCS-CCCHGGGGHHHHHHHHHC
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCcccccccchhHHHHHHHHHHHHH
Confidence            69999999999996      366788899999999999999999999999999999999999999999999999999999


Q ss_pred             c-ccchhHHHHHHHHHHHHH-HHHHHHhccCCChhHHHHHhhc----------CCcchHHHHHHHHHHHHHHHHHHHHHH
Q 015612           84 K-IAQDDRLQILKASQAKLK-FISFCEIMELVPEEELEAVAQA----------KPTAFTDQRARKIARFKRQRAAESKLQ  151 (403)
Q Consensus        84 k-~~~~~R~~~L~~a~~~~~-FL~~l~~Y~ll~~~~~~~~~~~----------~~~~~a~~R~~KI~rfK~eKel~~kL~  151 (403)
                      + ....+|+.+|+.|+.||. ||++|++|||+++++...+...          .+.+|+.+|+.||+|||++|+|+++|.
T Consensus        81 k~~~~~~R~~~L~~A~~~~~~FL~~~~~y~ll~~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~KI~r~K~eKel~~~L~  160 (340)
T PF04177_consen   81 KLSNPEDRLEILKRAKEYYIEFLKRCEDYGLLDKDDPKLLESYQDNPSSSSSSSLSDPAARRNEKIARFKREKELEQKLK  160 (340)
T ss_dssp             T-HHHHHHHHHHHHHHHHHHHHHCCHHHTT-S-HHHHHHHHT-HHS---SSCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             hhcCchhHHHHHHHHHHHHHHHHHHHHHCCCCChhHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9 577899999999999999 9999999999999887765433          356899999999999999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhCCCcc
Q 015612          152 EIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEE  231 (403)
Q Consensus       152 ~L~~~~~~~~r~~~~~~~~~~~e~~~~~~~~~DEE~~Re~~l~~L~l~~~~a~~~L~si~~El~iL~~~~~~~~~~~~~~  231 (403)
                      .|++....                   +.+++|||++|++||++|++|+++|+++|+||.+|++||++++++........
T Consensus       161 ~l~~~~~~-------------------~~~~~DEE~~Re~~l~~L~~~~~~s~~~l~si~~El~mL~~~~~~~~~~~~~~  221 (340)
T PF04177_consen  161 ELEKRRES-------------------DDDDDDEEIEREYYLLLLKLWVLKSLEELESIEQELEMLEMRPKMKEAPESEP  221 (340)
T ss_dssp             HHHHHHHT-------------------TTT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHTT----------
T ss_pred             HHHHhhcc-------------------cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcc
Confidence            99986431                   12356999999999999999999999999999999999999988765332210


Q ss_pred             hhhHHhHhhhhhhhhhhhhhHhhhhcCCCCCCccccchhhhhhhhcccccccccccCCCccccCccccCCCCchHHHHHH
Q 015612          232 FSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMA  311 (403)
Q Consensus       232 ~~~~~~d~r~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~~~p~~~~~~~it~~R~~lq  311 (403)
                      ......+.....+.+|+.+.+    .+.|.                      ....++|  ++||||     ++.|+++|
T Consensus       222 ~~~~~~~~~~~~~~~~~l~~~----~~~pl----------------------~~~~~~~--l~pfti-----~~~R~~~~  268 (340)
T PF04177_consen  222 SQDERDDEPDADGYSDRLESP----KPGPL----------------------LSKPGKP--LKPFTI-----TSTREQLQ  268 (340)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccccccccccccc----CCCCC----------------------CCCCCCC--CCCccc-----HHHHHHHH
Confidence            000000000011223332220    00010                      1112345  489975     45699999


Q ss_pred             hhcCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCCCCCcHHHHHHHHhhhccccCCC
Q 015612          312 AQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLGTSENDNEDDDDDAVQKARAFDDWKDDNP  391 (403)
Q Consensus       312 ~~VFgpGh~LPTMTvdE~~~~E~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~e~dee~~~k~R~WDd~KD~np  391 (403)
                      ++||||||+||||||||||++||+        +|.++.++..........+....+++++++|++++|+|+||||||+||
T Consensus       269 ~~VFgpg~~LPTMTveE~~e~E~~--------~g~~~~~~~~~~~~~~~~~~~~~e~~~e~~d~e~~k~R~WDdwKD~np  340 (340)
T PF04177_consen  269 KKVFGPGHPLPTMTVEEFLEQEMR--------EGNIPQGGGAKAEAKEEEEEEDDEDDDEEDDEETLKAREWDDWKDDNP  340 (340)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHhcCCCCCCCcCcHHHHHHHHHH--------hccCccccccccccccccccchhhhhhhhhcHHHHHHHhhhcccccCC
Confidence            999999999999999999999994        355666543220000011112233455667888999999999999998

TIP41 interacts with TAP42 and negatively regulates the TOR signalling pathway [].; GO: 0009966 regulation of signal transduction; PDB: 3QC1_A 2V0P_A.

>KOG2830 consensus Protein phosphatase 2A-associated protein [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-60  Score=455.91  Aligned_cols=308  Identities=35%  Similarity=0.501  Sum_probs=243.9

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhhccCCCchHHHHHHHHHHHHHHHHhhhhcCCCCCCCCccccccchhhhhHHHHhhh
Q 015612            1 MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGE   80 (403)
Q Consensus         1 ~~~~~~~~~sL~~lf~~~~~~~~~~~~s~~~q~~v~~~i~~l~~~~~~v~~l~lFS~NE~leDIsT~~L~yLllpy~lg~   80 (403)
                      |+.+.+...+|..||+...+.+.....+..++..+...|..+..|+.+|++|+|||+||+||||+|++||||+||||||.
T Consensus         1 Ma~~~e~~~~~~~L~d~~~~~~~~~~E~~~~~~~~~~~i~q~~~~t~m~~ql~lFSsNE~iedIsT~sLkyLlVpyflg~   80 (324)
T KOG2830|consen    1 MASLDELELPLQKLYDLSLKGKQLRDESEVATEPVLKRIKQLKVATEMVNQLALFSSNETIEDISTNSLKYLLVPYFLGK   80 (324)
T ss_pred             CcchhhhccchhhhHHHHHHhHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhccccccchhhhHHHHHH
Confidence            78888888888888888887766667888899999999999999999999999999999999999999999999999999


Q ss_pred             hhccccchhHHHHHHHHHHHHH-HHHHHHhccCCChhHH---------HHH----hhcCCcchHHHHHHHHHHHHHHHHH
Q 015612           81 LIEKIAQDDRLQILKASQAKLK-FISFCEIMELVPEEEL---------EAV----AQAKPTAFTDQRARKIARFKRQRAA  146 (403)
Q Consensus        81 L~~k~~~~~R~~~L~~a~~~~~-FL~~l~~Y~ll~~~~~---------~~~----~~~~~~~~a~~R~~KI~rfK~eKel  146 (403)
                      |+.++.+..|+++|+.|..||. ||.+|..|+|++....         ...    .......++..|..||+||+++||+
T Consensus        81 Lt~k~~~~~~~~~lk~a~~~f~~~ls~c~~y~L~~~~~~k~~~~~~~~~~~~s~~~~~~l~~~~~~r~~Kier~~r~kEl  160 (324)
T KOG2830|consen   81 LTEKQINEDRLDHLKLAEEHFINFLSRCQDYHLAPFELPKTKNNAADRALKISRMAEKSLVEAALKRQKKIERYKRKKEL  160 (324)
T ss_pred             HHHHhhcCchHHHHHHHHHHHHHHHHHHhccCccchhhccccCchhHHHHHHhhhccchhHHHHHHHHhHHHHHHHHHHH
Confidence            9999877778999999999999 9999999999654321         111    2235668999999999999999999


Q ss_pred             HHHHHHHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHhhh
Q 015612          147 ESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISL-AVCKALDLLEMLKKEEDMLSAVKERQL  225 (403)
Q Consensus       147 ~~kL~~L~~~~~~~~r~~~~~~~~~~~e~~~~~~~~~DEE~~Re~~l~~L~l-~~~~a~~~L~si~~El~iL~~~~~~~~  225 (403)
                      +.+|..++..                ++++     .+||+.+|++|+.+|+. |+..+++++++|.+|+.+|+....   
T Consensus       161 ~~~l~~~~~a----------------ve~~-----~~Dde~lrelyl~~l~~~~~d~~lee~E~i~~e~r~lkE~~s---  216 (324)
T KOG2830|consen  161 KHRLTRMQSA----------------VEDG-----QDDDEHLRELYLLQLQRGWIDISLEEEESIDQEERLLKEGES---  216 (324)
T ss_pred             HHHHHHHHHh----------------hhcC-----CCchHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHhcccc---
Confidence            9999999862                5554     34777799999999999 999999999999999999982110   


Q ss_pred             hCCCcchhhHHhHhhhhhhhhhhhhhHhhhhcCCCCCCccccchhhhhhhhcccccccccccCCCccccCccccCCCCch
Q 015612          226 KGGEEEFSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTS  305 (403)
Q Consensus       226 ~~~~~~~~~~~~d~r~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~~~p~~~~~~~it~  305 (403)
                                           |+ +..       +.++.            ++        ..+| ...||++       
T Consensus       217 ---------------------~r-~~s-------t~~t~------------~~--------e~~p-~~~~fi~-------  239 (324)
T KOG2830|consen  217 ---------------------SR-DPS-------TSNTS------------RG--------ETRP-PLFPFII-------  239 (324)
T ss_pred             ---------------------cc-ccc-------cCccc------------cc--------cCCC-CcchHHH-------
Confidence                                 00 000       00000            00        0144 4477753       


Q ss_pred             HHHHHHhhcCCCCCC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCCCCCcHHHHHHHHhhh
Q 015612          306 ERERMAAQVFQPMHR-LPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLGTSENDNEDDDDDAVQKARAFD  384 (403)
Q Consensus       306 ~R~~lq~~VFgpGh~-LPTMTvdE~~~~E~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~e~dee~~~k~R~WD  384 (403)
                      .|++.|++|||.||+ |||||||||++++|++        |.++.++..+....    .+++++++++|+++++|+|+||
T Consensus       240 ~r~~~q~kVfG~Gyp~lPtMsvdE~~~~~~~~--------g~a~~~~~~~~~a~----~ed~E~~e~ddd~~~~kar~wD  307 (324)
T KOG2830|consen  240 TRNETQKKVFGLGYPGLPTMTVDEFLDQEFEE--------GIAKAEAEESRPAA----KEDQEEEEEDDDEATMKARRWD  307 (324)
T ss_pred             HHHHHhhhhhhcCCCCCccccHHHHHHHHHHh--------hhcccCcccccccc----cchhhhhcccChHHHHHHhhhc
Confidence            399999999999995 8999999999988842        43333322221111    1122225778899999999999


Q ss_pred             ccccCCCCCCCCCCCCC
Q 015612          385 DWKDDNPRGAGNKKLTP  401 (403)
Q Consensus       385 d~KD~npRG~GN~~~~~  401 (403)
                      +|||+|||||||||+++
T Consensus       308 e~Kd~~prG~GN~~n~~  324 (324)
T KOG2830|consen  308 EFKDDHPRGSGNTMNTG  324 (324)
T ss_pred             cccccCcccccccccCC
Confidence            99999999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	403
3qc1_A	243	Protein Phosphatase Subunit: Alpha4 Length = 243		4e-09
2v0p_A	234	The Structure Of Tap42 Alpha4 Subunit Length = 234		7e-06

>pdb|3QC1|A Chain A, Protein Phosphatase Subunit: Alpha4 Length = 243

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 21/161 (13%)
Query: 15  FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
           FE  +K+ +   +ATE   S    D V KG E+LEK   M+ +L LFS NE  ++I++ +
Sbjct: 37  FETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTD 96
Query: 69  LKYILVPYFLGEL-IEKIAQDDRLQIL-KASQAKLKFISFC-----------EIMXXXXX 115
           LKY++VP   G L ++++    RL  L +A +  + F++ C           +       
Sbjct: 97  LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAE 156
Query: 116 XXXXXXXQAKP--TAFTDQRARKIARFKRQRAAESKLQEIK 154
                   A P   A   QR  KI R+K+++  E +L  +K
Sbjct: 157 NNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK 197

>pdb|2V0P|A Chain A, The Structure Of Tap42 Alpha4 Subunit Length = 234

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
Query: 48  MVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEK-------IAQDDRLQILKASQAK 100
           +  +L LFS+NET DD+STA++K++ V Y+LG LI +       +AQ    +++   ++ 
Sbjct: 49  IFDRLALFSTNETIDDVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSXKLIYLKKSV 108
Query: 101 LKFISFCEIM 110
             FI+F  ++
Sbjct: 109 ESFINFLTLL 118

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	403
3qc1_A	243	Immunoglobulin-binding protein 1; PP2A, signaling	4e-39
2v0p_A	234	TAP42, type 2A phosphatase-associated protein 42;	6e-31

>3qc1_A Immunoglobulin-binding protein 1; PP2A, signaling protein; 2.35A {Mus musculus} Length = 243

 Score =  139 bits (351), Expect = 4e-39
 Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 18/228 (7%)

Query: 1   MGEVSREELP--LPSLFERGRKIHQ------IATESGCDPDAVRKGCEVLEKCEDMVGKL 52
           M     E L   LP LFE  +K+ +        T S    D V KG E+LEK   M+ +L
Sbjct: 21  MAASEDELLLPRLPELFETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQL 80

Query: 53  GLFSSNETKDDISTANLKYILVPYFLGELIEKI-AQDDRLQILKASQAKLK-FISFCEIM 110
            LFS NE  ++I++ +LKY++VP   G L  K      RL  L+ ++     F++ C   
Sbjct: 81  DLFSRNEDLEEIASTDLKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCY 140

Query: 111 ELVPEEELEAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPS 170
            +   +  +    +      +  +  +A       A  +  +I+  K+++    R +A  
Sbjct: 141 HVAEFQLPQTKTNSAE---NNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK 197

Query: 171 APVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLS 218
           + VE+G+      D E  RE  L  +   +  +L+ LE + +E  +L 
Sbjct: 198 SAVESGQA-----DDERVREYHLLHLRRWIAVSLEELESIDQEIKILK 240

>2v0p_A TAP42, type 2A phosphatase-associated protein 42; phosphorylation, signal transduction inhibitor, hydrolase in; 1.80A {Saccharomyces cerevisiae} Length = 234

 Score =  117 bits (293), Expect = 6e-31
 Identities = 49/245 (20%), Positives = 88/245 (35%), Gaps = 55/245 (22%)

Query: 11  LPSLFERGRKIHQIATESGCDP-------DAVRKGCEVLEKC-EDMVGKLGLFSSNETKD 62
           +   F     ++    E              +    + L      +  +L LFS+NET D
Sbjct: 4   VTEQFNDIISLYSTKLEHTSLRQDSPEYQGLLLSTIKKLLNLKTAIFDRLALFSTNETID 63

Query: 63  DISTANLKYILVPYFLGELIEKIAQDD---------RLQILKASQAKLK-FISFCEIMEL 112
           D+STA++K++ V Y+LG LI +   +D         +L  LK S      F++  +  +L
Sbjct: 64  DVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSMKLIYLKKSVESFINFLTLLQDYKL 123

Query: 113 VPEEELEAV-------------------AQAKPTAFTDQRARKIARFKRQRAAESKLQEI 153
           +     E +                        +    +R  KI  F+R +   +KL  +
Sbjct: 124 LDPLVGEKLGNFKDRYNPQLSELYAQPKNNKDLSGAQLKRKEKIELFQRNKEISTKLHCL 183

Query: 154 KERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKE 213
           +                  ++  +ED   D  E  RE +L  +       ++ +E    E
Sbjct: 184 ELE----------------LKNNDEDHDHD--ELLRELYLMRLHHFSLDTINNIEQNLFE 225

Query: 214 EDMLS 218
            +MLS
Sbjct: 226 CEMLS 230

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	403
2v0p_A	234	TAP42, type 2A phosphatase-associated protein 42;	100.0
3qc1_A	243	Immunoglobulin-binding protein 1; PP2A, signaling	100.0

>2v0p_A TAP42, type 2A phosphatase-associated protein 42; phosphorylation, signal transduction inhibitor, hydrolase in; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.7e-49  Score=372.40  Aligned_cols=195  Identities=24%  Similarity=0.296  Sum_probs=165.6

Q ss_pred             CCHHHHHHHHHHHhh-h------hccCCCchHHHHHHHH-HHHHHHHHhhhhcCCCCCCCCccccccchhhhhHHHHhhh
Q 015612            9 LPLPSLFERGRKIHQ-I------ATESGCDPDAVRKGCE-VLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGE   80 (403)
Q Consensus         9 ~sL~~lf~~~~~~~~-~------~~~s~~~q~~v~~~i~-~l~~~~~~v~~l~lFS~NE~leDIsT~~L~yLllpy~lg~   80 (403)
                      .||+++|..|+++|. .      +.+|+.||++|+++|. .|+.|+.+|+++||||+||++|||+|++|+||+||||||.
T Consensus         2 ~~L~~lF~~a~~~~~~~le~~~~~~~s~~~Q~~v~~~i~~~le~~~~~v~~l~LFS~NE~leDIsT~~L~yLlvpy~Lg~   81 (234)
T 2v0p_A            2 ASVTEQFNDIISLYSTKLEHTSLRQDSPEYQGLLLSTIKKLLNLKTAIFDRLALFSTNETIDDVSTASIKFLAVDYYLGL   81 (234)
T ss_dssp             CCHHHHHHHHHHHHHHHTSSCSSCTTCHHHHHHHHHHHHHHHHHHHHHHTTSCC-----CGGGSCGGGGGGGGHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCcccccccchHHHhHHHHHHH
Confidence            589999999999887 3      4577889999999999 9999999999999999999999999999999999999999


Q ss_pred             hhccccc---------hhHHHHHHHHHHHHH-HHHHHHhccCCChhHHHHHhhc-------------------CCcchHH
Q 015612           81 LIEKIAQ---------DDRLQILKASQAKLK-FISFCEIMELVPEEELEAVAQA-------------------KPTAFTD  131 (403)
Q Consensus        81 L~~k~~~---------~~R~~~L~~a~~~~~-FL~~l~~Y~ll~~~~~~~~~~~-------------------~~~~~a~  131 (403)
                      |++++..         .+|+.+|+.|+.||. ||++|++|||+++++...+...                   .+.+|+.
T Consensus        82 L~~k~~~~~~~~~~~~~~R~~~L~~A~~~~~~FL~~l~~y~ll~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~a~  161 (234)
T 2v0p_A           82 LISRRQSNDSDVAQRQSMKLIYLKKSVESFINFLTLLQDYKLLDPLVGEKLGNFKDRYNPQLSELYAQPKNNKDLSGAQL  161 (234)
T ss_dssp             HHTTCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHTCSSTTSCCHHHHSCCCSSTTCHHHHHH
T ss_pred             HHHHhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHhhhccccchhhhhccccccccccccHHH
Confidence            9999865         789999999999999 9999999999999887665431                   1358999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015612          132 QRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLK  211 (403)
Q Consensus       132 ~R~~KI~rfK~eKel~~kL~~L~~~~~~~~r~~~~~~~~~~~e~~~~~~~~~DEE~~Re~~l~~L~l~~~~a~~~L~si~  211 (403)
                      +|+.||+|||++|+|+++|+.|+.+                ++++.+  +++|||.+|++||++|++|+++|+++|+||.
T Consensus       162 ~R~~KI~rfK~eKel~~kL~~L~~~----------------~~~~~~--D~~deE~~Re~~l~~L~~~~~~s~~~Lesi~  223 (234)
T 2v0p_A          162 KRKEKIELFQRNKEISTKLHCLELE----------------LKNNDE--DHDHDELLRELYLMRLHHFSLDTINNIEQNL  223 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH----------------C------------CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH----------------Hhcccc--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999874                233322  2457899999999999999999999999999


Q ss_pred             HHHHHHHHhH
Q 015612          212 KEEDMLSAVK  221 (403)
Q Consensus       212 ~El~iL~~~~  221 (403)
                      +|++||++++
T Consensus       224 ~ElemL~~~~  233 (234)
T 2v0p_A          224 FECEMLSNFL  233 (234)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHhcc
Confidence            9999999874

>3qc1_A Immunoglobulin-binding protein 1; PP2A, signaling protein; 2.35A {Mus musculus}

Probab=100.00  E-value=5.4e-49  Score=373.77  Aligned_cols=193  Identities=30%  Similarity=0.457  Sum_probs=165.0

Q ss_pred             CCCCHHHHHHHHHHHhhh------hccCCCchHHHHHHHHHHHHHHHHhhhhcCCCCCCCCccccccchhhhhHHHHhhh
Q 015612            7 EELPLPSLFERGRKIHQI------ATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGE   80 (403)
Q Consensus         7 ~~~sL~~lf~~~~~~~~~------~~~s~~~q~~v~~~i~~l~~~~~~v~~l~lFS~NE~leDIsT~~L~yLllpy~lg~   80 (403)
                      .+.+|+++|..|+++|..      |++|+.||++|+++|..|+.|+.+|++++|||+||+||||+|++|+||+||||||.
T Consensus        29 ~~~~L~~lF~~a~~~~~~le~~~~~~~S~~~Q~~v~~~i~~le~~~~~v~~l~LFS~NE~leDIsT~~LkyLlvpy~Lg~  108 (243)
T 3qc1_A           29 LLPRLPELFETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTDLKYLMVPALQGA  108 (243)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHCCSCTTSHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSSCSTTSCTTTGGGGGHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccccccccchHhhHHHHHHH
Confidence            456999999999998863      56888899999999999999999999999999999999999999999999999999


Q ss_pred             hhccccch-hHHHHHHHHHHHHH-HHHHHHhccCCChh----HHHHHhh----c-----CCcchHHHHHHHHHHHHHHHH
Q 015612           81 LIEKIAQD-DRLQILKASQAKLK-FISFCEIMELVPEE----ELEAVAQ----A-----KPTAFTDQRARKIARFKRQRA  145 (403)
Q Consensus        81 L~~k~~~~-~R~~~L~~a~~~~~-FL~~l~~Y~ll~~~----~~~~~~~----~-----~~~~~a~~R~~KI~rfK~eKe  145 (403)
                      |++|+... .|+.+|+.|+.||. ||++|++|||++++    .......    .     .+.+|+.+|+.||+|||++||
T Consensus       109 L~~k~~~~~~Rl~~L~~A~~~~~~FL~~l~~Y~ll~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~rR~~KI~rfK~eKe  188 (243)
T 3qc1_A          109 LTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAENNTASSSMAYPNLVAMASQRQAKIERYKQKKE  188 (243)
T ss_dssp             HHTTCCCGGGHHHHHHHHHHHHHHHHTTCCCCC-----------------------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcccchhhhcccccccccccccccccchHHHHHHHHHHHHHHHHH
Confidence            99998655 59999999999999 99999999999652    1111111    0     134899999999999999999


Q ss_pred             HHHHHHHHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015612          146 AESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAV  220 (403)
Q Consensus       146 l~~kL~~L~~~~~~~~r~~~~~~~~~~~e~~~~~~~~~DEE~~Re~~l~~L~l~~~~a~~~L~si~~El~iL~~~  220 (403)
                      |+++|+.|++..+                +     +++|||.+|++||++|++|+++|+++|+||.+|++||+++
T Consensus       189 Le~kL~~L~~~~e----------------~-----~~~DeE~~Re~yL~~L~l~~~~s~~~Lesi~~EleiL~~r  242 (243)
T 3qc1_A          189 VEHRLSALKSAVE----------------S-----GQADDERVREYHLLHLRRWIAVSLEELESIDQEIKILKEK  242 (243)
T ss_dssp             HHHHHHHHHHHHH----------------H-----TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHh----------------c-----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999987532                2     2359999999999999999999999999999999999865

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00