Citrus Sinensis ID: 015676

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400---
Protein Sequence
MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEccccEEEEcccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHcHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEcccccccHcccccccccccccccc
Coil and Loop (DISEMBL)
miecsvchstleletvggktvsraydrhrhqvsskTRFLNVALVVGDCILVGLQPILVFttkvdggfkfspvSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVnqlrslpegtsalglpvatgaYLYTLIFVTVPSLASVFNeyalksqydtsiyhqnlfLYGYGAIFNFLGIVITAmfkgpssfdilqgHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMhqffsplskvkdepknislesvdspknkrskdtsfigmaaganedashravneekapllpi
Flexible Loop (DISEMBL)
miecsvchstleletvggkTVSRAYDRHrhqvssktrflNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIslesvdspknkrskdTSFIGMAAganedashravneekapllpi
Low Complexity Region (SEG)
MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI
Disordered region (IsUnstruct)
****SVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP*******************************************************
Disordered Region (DISOPRED)
*************************************FLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL************PVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF**********************************************************
Disordered Region (DISEMBL)
MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLES*********KDTSFIGMAAGA*******************
Disordered Region (DISPRO)
MIECSVCHSTLELETVGGKTVS*****HRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPE*****GLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS*****************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	403	2.2.26 [Sep-21-2011]
Q9C5H6	405	CMP-sialic acid transport	yes	no	0.987	0.982	0.765	1e-179
Q8GY97	406	CMP-sialic acid transport	no	no	0.990	0.982	0.764	1e-177
Q8LGE9	340	CMP-sialic acid transport	no	no	0.746	0.885	0.307	3e-36
F4JN00	352	CMP-sialic acid transport	no	no	0.707	0.809	0.315	6e-30
Q6DCG9	413	Probable UDP-sugar transp	N/A	no	0.803	0.784	0.252	2e-20
A4IHW3	321	Probable UDP-sugar transp	no	no	0.756	0.950	0.273	7e-20
A0JMG9	314	Probable UDP-sugar transp	no	no	0.672	0.863	0.282	7e-20
Q90X48	440	Probable UDP-sugar transp	yes	no	0.803	0.736	0.255	9e-20
Q93890	368	UDP-galactose/UDP-N-acety	yes	no	0.702	0.769	0.261	3e-15
P78382	337	CMP-sialic acid transport	yes	no	0.669	0.801	0.269	4e-15

>sp|Q9C5H6|CSTR3_ARATH CMP-sialic acid transporter 3 OS=Arabidopsis thaliana GN=UTR6 PE=2 SV=1

 Score =  627 bits (1618), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 306/400 (76%), Positives = 347/400 (86%), Gaps = 2/400 (0%)

Query: 3   ECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTK 62
           EC  CHS  +L + G KT+SRAYD H+ +VSSK R LNV LVVGDC+LVGLQP+LV+ +K
Sbjct: 7   ECPACHS--KLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLVYMSK 64

Query: 63  VDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAV 122
           VDG F FSP+SVNFLTE  KV FAIVMLL+QARH+KVGEK LLS ST  QAARNNVLLAV
Sbjct: 65  VDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNVLLAV 124

Query: 123 PAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLI 182
           PA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK++MKRRFSIIQWEALALLLI
Sbjct: 125 PALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSIIQWEALALLLI 184

Query: 183 GISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNL 242
           GISVNQLRSLPEG +A+G+P+ATGAY+ T+IFVTVPS+ASVFNEYALKSQYDTSIY QNL
Sbjct: 185 GISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKSQYDTSIYLQNL 244

Query: 243 FLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTI 302
           FLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQGILSSFFFKYADTI
Sbjct: 245 FLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKYADTI 304

Query: 303 LKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLE 362
           LKKYSSTVATIFTG+ASAALFGH +TMNF+LGISIVFISMHQFFSPL+K +DE +     
Sbjct: 305 LKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQFFSPLAKARDEQQQNGNL 364

Query: 363 SVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 402
            + + K+    + SFI MAAGANE+ASHR  ++++ PLLP
Sbjct: 365 ELGNTKDTHRANESFINMAAGANEEASHRGESDDRTPLLP 404

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY97|CSTR2_ARATH CMP-sialic acid transporter 2 OS=Arabidopsis thaliana GN=At2g43240 PE=2 SV=1

 Score =  622 bits (1603), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 309/404 (76%), Positives = 347/404 (85%), Gaps = 5/404 (1%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRH--QVSSKTRFLNVALVVGDCILVGLQPILV 58
           M ECSVC S   L +   K +SRAYD + +  +VSSK R LNV LVVGDC+LVGLQP+LV
Sbjct: 5   MAECSVCRS--RLVSPSSKAISRAYDNYNYKIRVSSKQRALNVFLVVGDCMLVGLQPVLV 62

Query: 59  FTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNV 118
           + +KVDG F FSP+SVNFLTE  KV FA+VMLL QARH+KVGEK LLS ST  QAARNN+
Sbjct: 63  YMSKVDGKFNFSPISVNFLTEIAKVIFAMVMLLFQARHQKVGEKPLLSLSTFVQAARNNM 122

Query: 119 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALA 178
           LLAVPA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK+IMKRRFSIIQWEALA
Sbjct: 123 LLAVPAGLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMIMKRRFSIIQWEALA 182

Query: 179 LLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIY 238
           LLLIGIS+NQLRSLPEG + + +P+ATGAY+ T IFVTVPSLASV+NEYALKSQYDTSIY
Sbjct: 183 LLLIGISINQLRSLPEGATTVAVPIATGAYICTFIFVTVPSLASVYNEYALKSQYDTSIY 242

Query: 239 HQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKY 298
            QNLFLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQGILSSFFFKY
Sbjct: 243 LQNLFLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKY 302

Query: 299 ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKN 358
           ADTILKKYSSTVATIFTG+ASAALFGH LTMNF+LGISIVFISMHQFFSPLSK KDE +N
Sbjct: 303 ADTILKKYSSTVATIFTGIASAALFGHILTMNFLLGISIVFISMHQFFSPLSKAKDEQQN 362

Query: 359 ISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 402
            ++E VD+    R+KD SFI MAAGA E+ASHR  ++++ PLLP
Sbjct: 363 GNIELVDAKDGHRAKD-SFINMAAGATEEASHRIESDDRVPLLP 405

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LGE9|CSTR1_ARATH CMP-sialic acid transporter 1 OS=Arabidopsis thaliana GN=At5g41760 PE=2 SV=1

 Score =  152 bits (385), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 165/312 (52%), Gaps = 11/312 (3%)

Query: 49  ILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFS 108
           IL   Q IL   ++ DGG+K+   +V FL E  K+   I+  L   R  +    +    +
Sbjct: 15  ILTSSQGILTTLSQSDGGYKYDYATVPFLAEVFKL---IISGLFLWREMRTSSSTTSRIT 71

Query: 109 TIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRR 168
           T  ++ R   L  +P+ +Y I+N ++F    Y + +T +++ NLK+    +L ++ +KR+
Sbjct: 72  TDWKSVR---LFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLKRK 128

Query: 169 FSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 228
            S +QW A+ LL +G + +Q++   E +           YL  ++   + +LA ++ E+ 
Sbjct: 129 LSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYTEFL 188

Query: 229 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVIT----AMFKGPSSFDILQGHSKATMLLICN 284
           +K   DT +Y QNL LY +G++FN   ++         KGP    I  G+S  T L++ N
Sbjct: 189 MKRNNDT-LYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVVLN 247

Query: 285 NAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ 344
             + G+L S+  KYAD I+K YS+++A + T +AS  LF    T+   LGI I  +S+H 
Sbjct: 248 LGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSLHM 307

Query: 345 FFSPLSKVKDEP 356
           +F+P   + D P
Sbjct: 308 YFAPPHTLVDLP 319

Essential protein. Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi.

Arabidopsis thaliana (taxid: 3702)

>sp|F4JN00|CSTR4_ARATH CMP-sialic acid transporter 4 OS=Arabidopsis thaliana GN=At4g35335 PE=2 SV=1

 Score =  132 bits (331), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 152/295 (51%), Gaps = 10/295 (3%)

Query: 49  ILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFS 108
           IL   Q IL+  +K  G +++S  + NFL   +K   +++ L    +++ V + + LS +
Sbjct: 60  ILTSSQAILIVWSKRAGKYEYSVTTANFLVGTLKCALSLLALTRIWKNEGVTDDNRLS-T 118

Query: 109 TIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRR 168
           T  +      +  +PA LY   N L++ +  Y +    ++L NL +    +L +II+KR+
Sbjct: 119 TFDEVK----VFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKRK 174

Query: 169 FSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 228
            S IQW    LL  G +  QL S  +      LP  T A +  L+       A V+ E  
Sbjct: 175 LSEIQWAGFILLCCGCTTAQLNSNSDRVLQTSLPGWTMAIVMALL----SGFAGVYTEAI 230

Query: 229 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQ 288
           +K +   +I  QN +LY +G  FN + IVI   F   ++     G+S  T+L+I N+A  
Sbjct: 231 IKKRPSRNINVQNFWLYVFGMAFNAVAIVIQD-FDAVANKGFFHGYSFITLLMILNHALS 289

Query: 289 GILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMH 343
           GI  S   KYAD I+K YS++VA + T + S  LF   L++ F LG ++V +S++
Sbjct: 290 GIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVY 344

Sugar transporter involved in the transport of CMP-sialic acid from the cytoplasm into the Golgi (By similarity). Essential protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DCG9|S35A5_XENLA Probable UDP-sugar transporter protein SLC35A5 OS=Xenopus laevis GN=slc35a5 PE=2 SV=1

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 163/376 (43%), Gaps = 52/376 (13%)

Query: 59  FTTKVDGGFKFSPVSVNFLTEAVKVFFAIVM---LLLQARHKKVGEKSLLSFSTIAQAAR 115
           F+   D  + + P +VN   EAVK+ F + M   +++  R       SL  F    +   
Sbjct: 39  FSANEDNKYDYVPATVNVCAEAVKLLFCMAMSVRIIMTERRSFRCHASLKHFCQYMK--- 95

Query: 116 NNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWE 175
                AVPAFLY ++N + F +  Y  PA   +LSN  +   A+  ++I+KR+ S +QW 
Sbjct: 96  ----WAVPAFLYFLDNLIIFYVLAYLQPAMAVLLSNFVIITTAVFFRLILKRQLSCVQWA 151

Query: 176 ALALLLIGI----SVNQ--------------LRSLPEGTSA-LGLP-----------VAT 205
           +L +L + I    S N                 S P  +   L  P           +A 
Sbjct: 152 SLVILFLSIMGLTSRNDTAHHEVSVDVHHHLFHSAPSNSCTYLNKPDTEAHTVSLKAIAN 211

Query: 206 GAYLY-------TLIFVTVPSLASVFNEYALK--SQYDTSIYHQNLFLYGYGAIFNFLGI 256
             +L+        L+   + +LA+++NE  LK   Q   SI+ QN  LY +G  FN L +
Sbjct: 212 FQFLHLGLGHFLILLQCVISALANIYNEKILKEGEQMSESIFIQNSKLYVFGVFFNGLTL 271

Query: 257 VI-TAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFT 315
           V+    F    S     GH+  ++ LI   A  G+  +F  K+ D +    ++ + T+  
Sbjct: 272 VLHDEYFSKIKSCGFFYGHNGFSVALIFTTAFVGLSVAFILKFRDNMFHVLTAQITTVII 331

Query: 316 GLASAALFGHTLTMNFILGISIVFISMHQF-FSPLSKVKDEPKNISLESVDSPKNKRSK- 373
            + S  +F    +++F L   +V +S+  +  S +++     K   L+ ++    +RS  
Sbjct: 332 TIVSYFVFSFKPSLDFFLEAPVVLLSIFIYNASRITESSGTTKREKLKIINGDVWERSNG 391

Query: 374 DTSFIGMAAGANEDAS 389
           D   +     ANED+ 
Sbjct: 392 DGQELEKLTAANEDSE 407

Xenopus laevis (taxid: 8355)

>sp|A4IHW3|S35A4_XENTR Probable UDP-sugar transporter protein SLC35A4 OS=Xenopus tropicalis GN=slc35a4 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 156/326 (47%), Gaps = 21/326 (6%)

Query: 26  DRHRHQVSSK--TRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKV 83
           D   H  S K   + L   ++V    + G    L++  KV+G   FS  +V  L E  K 
Sbjct: 9   DGSNHSPSRKRLKQILWGLMLVLSVTIYGSHAPLIYLCKVNGEIPFSSSAVVLLIELSKF 68

Query: 84  FFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNP 143
             ++V  L+Q        KSL +  +   AA      AVPA LY  NN L   +Q + +P
Sbjct: 69  VISLVFFLIQ------DWKSLKASVSWHLAAP----YAVPAVLYGANNNLVVYIQHFMDP 118

Query: 144 ATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLL---IGISVNQLRSLPEGTSALG 200
           ++ ++LSNLK+   A+L  + +++R S+ +W ++ LLL   +  S   ++ L + +S   
Sbjct: 119 SSFQVLSNLKIVSTAVLYSLFLRQRLSVRRWLSVFLLLAAGVFYSYGGIQDLEKVSSDTN 178

Query: 201 LPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITA 260
           L V     L  L +  +  L++V+ E  LK+Q    +  QNL+LY +G I N     +TA
Sbjct: 179 LYVTLPGLLLMLAYCLISGLSAVYTEMTLKTQ-KIPLNMQNLYLYSFGIIIN-----LTA 232

Query: 261 MFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASA 320
                 + D   G S    ++I + A  G++ S   K ++ I + +  + + +  G  S 
Sbjct: 233 HLTSSKNSDFFDGFSVWVWVIILSQALNGLIMSLVMKLSNNITRLFIISFSMLANGFLSF 292

Query: 321 ALFGHTLTMNFILGISIVFISMHQFF 346
            LF   LT  F L + ++ ++++ ++
Sbjct: 293 ILFQLQLTALFFLAVVLIGLAVYMYY 318

Xenopus tropicalis (taxid: 8364)

>sp|A0JMG9|S35A4_DANRE Probable UDP-sugar transporter protein SLC35A4 OS=Danio rerio GN=slc35a4 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 131/287 (45%), Gaps = 16/287 (5%)

Query: 62  KVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLA 121
           K      FS  S   L E  K+F +   LL        G  S L  S     A      A
Sbjct: 43  KTQAQIPFSASSCVLLIETSKLFISFASLLAS------GSVSTLRISISMTTASP---YA 93

Query: 122 VPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLL 181
           VPA LYA NN+L   MQ Y +P++ ++LSNLK+   ALL    + +R    QW A+ LL+
Sbjct: 94  VPAVLYAFNNHLVVFMQAYMDPSSFQVLSNLKIASTALLYTSCLGKRLHRRQWFAMGLLV 153

Query: 182 -IGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
             G+S +      EG     + + +   L  L++  V  LA+V+ E  LKSQ    +  Q
Sbjct: 154 SAGVSHSCFSYDLEGKRETAVYITSWGLLLVLVYCFVSGLAAVYTERVLKSQ-RLPLSMQ 212

Query: 241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
           NLFLY +G + N     + +   G       +G+S    +++    A G+L S   K+  
Sbjct: 213 NLFLYTFGVVVN-----LASHLSGGEQKGFFEGYSAVVWVIVAGQVANGLLMSVVMKHGT 267

Query: 301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS 347
            I + +  + A +   + S  + G  LT  F+  + ++  +++ +++
Sbjct: 268 GITRLFVISSAMLVNAVLSWGILGVQLTGYFLFPVVLIGWAVYLYYT 314

Danio rerio (taxid: 7955)

>sp|Q90X48|S35A5_DANRE Probable UDP-sugar transporter protein SLC35A5 OS=Danio rerio GN=slc35a5 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 177/388 (45%), Gaps = 64/388 (16%)

Query: 31  QVSSKTRFLNVALVVGDCILVGLQPILV--FTTKVDGGFKFSPVSVNFLTEAVKVFFAIV 88
           ++ S++    +AL +G  + +G   IL+  F+   +  + + P SVN + EA+K+ F +V
Sbjct: 28  RICSRSSAYTLALGLG-FVTLGTSRILLLKFSGNEENKYDYLPASVNLMAEAIKLVFCLV 86

Query: 89  M----LLLQARH-KKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNP 143
           M    ++ + R  K +G  S  SF +  +        +VPAFLY ++N + F +  Y  P
Sbjct: 87  MSVRVIIREGRSFKDLGCSSGASFLSYLK-------WSVPAFLYFLDNLIIFYVIAYLQP 139

Query: 144 ATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGI-------------SVNQL- 189
           A   + SN+ +F  A L ++++KRR S +QW +L +L + I             +V+ L 
Sbjct: 140 AMAVLFSNIVIFTTAFLFRVVLKRRLSWVQWASLIILFLSIVSLTTGNGDQHAMAVHGLH 199

Query: 190 ------------------------------RSLPEGTSALGLPVATGAYLYTLIFVTVPS 219
                                         R L +      L      Y+  L+   + +
Sbjct: 200 PAHISTPSNSCLKYTHLHQVHQSHNESYWSRELWDSQLIHKLNSFGLGYVLLLLQCFISA 259

Query: 220 LASVFNEYALK--SQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS-SFDILQGHSK 276
           LA+++NE  LK   Q   SI+ QN  LY +G +FN L +++ A ++  +    IL GH+ 
Sbjct: 260 LANIYNEKILKEGEQLVESIFIQNSKLYLFGLVFNSLTLLLHADYRNLTLHCGILYGHNV 319

Query: 277 ATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGIS 336
            ++ L    AA G+  +F  K+ D +    +  + T+     S  LF    +M+F +   
Sbjct: 320 FSVALGFVTAALGLSVAFILKFRDNMFHVLTGQITTVVVTALSFFLFDFQPSMDFFMQAP 379

Query: 337 IVFISMHQFFSPLSKVKDEPKNISLESV 364
           +V +S+  + S  SK+KD    +  E +
Sbjct: 380 VVLLSIFIYHS--SKMKDPEYALQQERL 405

Danio rerio (taxid: 7955)

>sp|Q93890|SRF3_CAEEL UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 OS=Caenorhabditis elegans GN=srf-3 PE=1 SV=5

 Score = 83.2 bits (204), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 8/291 (2%)

Query: 62  KVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLA 121
           +VD  F  S V+V +LTE +K F   + L L A+ +          + I +   + + + 
Sbjct: 67  EVDAMF-VSTVAV-WLTEVIKCF---ICLFLVAQEETPRRFIHALRTQILEQPYDTLKVC 121

Query: 122 VPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLL 181
           +PA +Y + N L ++   + + AT  + S LK+F  A+   II++R  +  QW ALA+L 
Sbjct: 122 IPAMIYIVQNNLFYVAASHLDAATFMITSQLKIFTAAIFTVIILRRSLNRTQWFALAVLF 181

Query: 182 IGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQN 241
           +G+S+ QL+      S+   P      +       +   A ++ E  LK     S++ +N
Sbjct: 182 VGVSLVQLQGTKAKESSGESPFVGFVAVVVA--CCLSGFAGIYFEKILKGSAPVSLWMRN 239

Query: 242 LFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADT 301
           + +  +    +F  I +    K  + + +L G      L +      G+  +   KYAD 
Sbjct: 240 VQMAVFSIPASFSAIYMQDS-KTVNEYGLLYGFDSIVWLTVLWYGVGGLSVAVCIKYADN 298

Query: 302 ILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV 352
           I K ++++VA I + + S  LF    +  F+LG S+V  S+  + S  S V
Sbjct: 299 IAKNFATSVAIILSTIGSIFLFDFIPSFTFLLGASLVIFSIFLYSSHQSMV 349

Acts as a transporter of both UDP-galactose and UDP-N-acetylglucosamine into the Golgi lumen.

Caenorhabditis elegans (taxid: 6239)

>sp|P78382|S35A1_HUMAN CMP-sialic acid transporter OS=Homo sapiens GN=SLC35A1 PE=2 SV=1

 Score = 83.2 bits (204), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 143/308 (46%), Gaps = 38/308 (12%)

Query: 57  LVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARN 116
           L +T   D    FS  +V  +TE +K+  ++ +L      K+ G     S      + R 
Sbjct: 31  LRYTRTSDKELYFSTTAVC-ITEVIKLLLSVGIL-----AKETG-----SLGRFKASLRE 79

Query: 117 NVL--------LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRR 168
           NVL        L+VP+ +YA+ N + F+     + A  ++   LK+   AL   +++ R 
Sbjct: 80  NVLGSPKELLKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRT 139

Query: 169 FSIIQWEALALLLIGISVNQLRS------LPEGTSALGLPVATGAYLYTLIFVTVPSLAS 222
            S +QW ++ +L  G+++ Q +       + E    LG     GA     I V     A 
Sbjct: 140 LSKLQWVSVFMLCAGVTLVQWKPAQATKVVVEQNPLLGF----GA---IAIAVLCSGFAG 192

Query: 223 VFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVIT--AMFKGPSSFDILQGHSKATML 280
           V+ E  LKS  DTS++ +N+ +Y  G I    G+ ++  A  K    F    G++     
Sbjct: 193 VYFEKVLKSS-DTSLWVRNIQMYLSGIIVTLAGVYLSDGAEIKEKGFF---YGYTYYVWF 248

Query: 281 LICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFI 340
           +I   +  G+ +S   KY D I+K +S+  A + + +AS  LFG  +T+ F LG  +V +
Sbjct: 249 VIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTIASVMLFGLQITLTFALGTLLVCV 308

Query: 341 SMHQFFSP 348
           S++ +  P
Sbjct: 309 SIYLYGLP 316

Transports CMP-sialic acid from the cytosol into Golgi vesicles where glycosyltransferases function.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	403
224101251	408	predicted protein [Populus trichocarpa]	1.0	0.987	0.826	0.0
255547474	400	UDP-galactose/UDP-N-acetylglucosamine tr	0.992	1.0	0.833	0.0
224109188	403	predicted protein [Populus trichocarpa]	1.0	1.0	0.818	0.0
359478080	405	PREDICTED: probable UDP-sugar transporte	0.992	0.987	0.830	0.0
356536564	403	PREDICTED: probable UDP-sugar transporte	0.987	0.987	0.815	0.0
363808016	403	uncharacterized protein LOC100815055 [Gl	0.987	0.987	0.810	0.0
357445115	432	UDP-galactose transporter [Medicago trun	0.990	0.923	0.758	0.0
449446225	402	PREDICTED: CMP-sialic acid transporter 2	0.985	0.987	0.805	0.0
255577789	898	conserved hypothetical protein [Ricinus	0.957	0.429	0.822	0.0
297820766	405	UDP-galactose transporter 6 [Arabidopsis	0.985	0.980	0.783	1e-180

>gi|224101251|ref|XP_002312202.1| predicted protein [Populus trichocarpa] gi|222852022|gb|EEE89569.1| predicted protein [Populus trichocarpa]

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/403 (82%), Positives = 363/403 (90%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS +       K V+RAYDRHR  VSSKTRFLNV LVVGDCILVGLQPILV+ 
Sbjct: 6   MIECSVCHSKISANNNNSKAVARAYDRHRSDVSSKTRFLNVLLVVGDCILVGLQPILVYM 65

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL 120
           +K DG F+FSP+SVNFLTE  KVFFAI MLL+QAR KKVGEKSLLS ST  QAARNNVLL
Sbjct: 66  SKQDGKFEFSPISVNFLTETAKVFFAIFMLLIQARQKKVGEKSLLSLSTFVQAARNNVLL 125

Query: 121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
           AVPAFLYAI+NYLKFIMQLYFNPATVKML NLKV VIA+LLK+IMKRRFSIIQWEALALL
Sbjct: 126 AVPAFLYAISNYLKFIMQLYFNPATVKMLGNLKVLVIAVLLKMIMKRRFSIIQWEALALL 185

Query: 181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
           LIGISVNQLR+LPEG+SA+GLPVATGAYLYTLIFV+VPS ASV+NEYALKSQ++TSIY Q
Sbjct: 186 LIGISVNQLRTLPEGSSAMGLPVATGAYLYTLIFVSVPSFASVYNEYALKSQFETSIYLQ 245

Query: 241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
           NLFLYGYGAIFNFL I++TA+FKGPSS DIL GHS+ATMLLICNNAAQGILSSFFFKYAD
Sbjct: 246 NLFLYGYGAIFNFLAILVTAIFKGPSSLDILHGHSRATMLLICNNAAQGILSSFFFKYAD 305

Query: 301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIS 360
           TILKKYSSTVATIFTG+ASA LFGH LTMNFILGISIVFISMHQFFSPLSKVKDEP++ S
Sbjct: 306 TILKKYSSTVATIFTGIASAVLFGHALTMNFILGISIVFISMHQFFSPLSKVKDEPRDDS 365

Query: 361 LESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI 403
           LE VDS  ++RSKD+SFI M AGAN+DASH   ++EKAPLLPI
Sbjct: 366 LEMVDSQNSQRSKDSSFINMTAGANDDASHHVGHDEKAPLLPI 408

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547474|ref|XP_002514794.1| UDP-galactose/UDP-N-acetylglucosamine transporter, putative [Ricinus communis] gi|223545845|gb|EEF47348.1| UDP-galactose/UDP-N-acetylglucosamine transporter, putative [Ricinus communis]

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/403 (83%), Positives = 362/403 (89%), Gaps = 3/403 (0%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS +   +   KTVSRAYDRHR  VSSKTR LN+ LVVGDCILVGLQPILV+ 
Sbjct: 1   MIECSVCHSKISPTS---KTVSRAYDRHRSDVSSKTRALNILLVVGDCILVGLQPILVYM 57

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL 120
           +KVDG FKFSP+SVNFLTEA KV FAI+ML +QARHKK G+K  LS ST  QAARNNVLL
Sbjct: 58  SKVDGQFKFSPISVNFLTEAAKVLFAILMLCIQARHKKTGDKPPLSVSTFVQAARNNVLL 117

Query: 121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
           AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKV VIA+LLKIIMKRRFSIIQWEALALL
Sbjct: 118 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVLVIAVLLKIIMKRRFSIIQWEALALL 177

Query: 181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
           LIGISVNQLRSLP GT+A+GLPVATGAYLYTLIF TVPSLASV+NEYALKSQ+DTSIY Q
Sbjct: 178 LIGISVNQLRSLPGGTTAMGLPVATGAYLYTLIFATVPSLASVYNEYALKSQFDTSIYLQ 237

Query: 241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
           NLFLYGYGAIFNFL I++TA+FKGPSS DILQGHSKATMLLICNNAAQGILSSFFFKYAD
Sbjct: 238 NLFLYGYGAIFNFLAILVTAIFKGPSSLDILQGHSKATMLLICNNAAQGILSSFFFKYAD 297

Query: 301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIS 360
           TILKKYSSTVATIFTG+ASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEP N  
Sbjct: 298 TILKKYSSTVATIFTGIASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPPNGG 357

Query: 361 LESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI 403
           ++ +D   N+RSKD +FI M AGANEDA+H   ++EKAPLLPI
Sbjct: 358 VQMMDGKNNQRSKDAAFINMTAGANEDANHLVEHDEKAPLLPI 400

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109188|ref|XP_002315116.1| predicted protein [Populus trichocarpa] gi|222864156|gb|EEF01287.1| predicted protein [Populus trichocarpa]

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/403 (81%), Positives = 360/403 (89%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECS CHS +       K V+RAYDRHR  VSSK R LN+ LV GDCI VGLQPILV+ 
Sbjct: 1   MIECSECHSKISANNNNSKAVARAYDRHRSDVSSKARVLNLLLVGGDCIFVGLQPILVYI 60

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL 120
           +K +G F +SP+SVNFLTE  KVFFAI MLL+QARHKKVGEKSLLSFST  QAARNNVLL
Sbjct: 61  SKHNGNFDYSPISVNFLTETAKVFFAIFMLLIQARHKKVGEKSLLSFSTFVQAARNNVLL 120

Query: 121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
           AVPAFLYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK+IMKRRFSIIQWEALALL
Sbjct: 121 AVPAFLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKVIMKRRFSIIQWEALALL 180

Query: 181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
           LIGIS+NQL+SLP G++A+GL VATGAYLYTLIFVTVPS ASV+NEYALKSQ++TSIY Q
Sbjct: 181 LIGISLNQLQSLPAGSTAMGLSVATGAYLYTLIFVTVPSFASVYNEYALKSQFETSIYLQ 240

Query: 241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
           NLFLYGYGAIFNFL I++TA+FKGPSS DIL GHSKATMLLICNNAAQGILSSFFFKYAD
Sbjct: 241 NLFLYGYGAIFNFLAILVTALFKGPSSLDILHGHSKATMLLICNNAAQGILSSFFFKYAD 300

Query: 301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIS 360
           TILKKYSSTVATIFTG+ASA LFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEP+N S
Sbjct: 301 TILKKYSSTVATIFTGIASAVLFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPQNGS 360

Query: 361 LESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLPI 403
           LE+VD   N+RSKD+SFI MAAGAN+DASHR  ++EKAPLLPI
Sbjct: 361 LETVDGQNNQRSKDSSFINMAAGANDDASHRVEHDEKAPLLPI 403

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478080|ref|XP_003632066.1| PREDICTED: probable UDP-sugar transporter protein SLC35A5-like [Vitis vinifera] gi|297745192|emb|CBI39184.3| unnamed protein product [Vitis vinifera]

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/402 (83%), Positives = 359/402 (89%), Gaps = 2/402 (0%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS   L +   KTVSRAYDRHR ++SSK R LNV LVVGDCILVG QPILVF 
Sbjct: 5   MIECSVCHS--RLVSPSAKTVSRAYDRHRSKISSKHRALNVFLVVGDCILVGFQPILVFM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL 120
           +KVDG F+FSP+SVNFLTE  KV FAIVMLLLQAR +KVGEK LLS ST  QAARNNVLL
Sbjct: 63  SKVDGKFEFSPISVNFLTEIAKVLFAIVMLLLQARRQKVGEKPLLSVSTFVQAARNNVLL 122

Query: 121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
           AVPA LYAINNYLKFIMQLYFNPATVKMLSNLKV VIA+LLK+IM+RRFS IQWEALALL
Sbjct: 123 AVPALLYAINNYLKFIMQLYFNPATVKMLSNLKVLVIAVLLKMIMRRRFSTIQWEALALL 182

Query: 181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
           LIGISVNQ+RSLPEGT+ALGLPVATGAYLYTLIFVTVPSLASV+NEYALKSQYDTSIY Q
Sbjct: 183 LIGISVNQMRSLPEGTTALGLPVATGAYLYTLIFVTVPSLASVYNEYALKSQYDTSIYLQ 242

Query: 241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
           NLFLYGYGAIFNFLGIV TA+ KGPSSFDIL GHSKATMLLI NNAAQGILSSFFFKYAD
Sbjct: 243 NLFLYGYGAIFNFLGIVGTAVVKGPSSFDILHGHSKATMLLIFNNAAQGILSSFFFKYAD 302

Query: 301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIS 360
           TILKKYSSTVATIFTG+ASAA+FGHTLT+NFILGISIVFISMHQFFSPLSKVKDE +N  
Sbjct: 303 TILKKYSSTVATIFTGIASAAMFGHTLTINFILGISIVFISMHQFFSPLSKVKDEEQNGK 362

Query: 361 LESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 402
           LE +D   + R KD+SFI MAAGANE+ASHR  ++E+ PLLP
Sbjct: 363 LEVMDIQGDHRLKDSSFINMAAGANEEASHRVGSDERQPLLP 404

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536564|ref|XP_003536807.1| PREDICTED: probable UDP-sugar transporter protein SLC35A4-like [Glycine max]

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/402 (81%), Positives = 357/402 (88%), Gaps = 4/402 (0%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           ++ECSVCHS  +L +   KT+SRAYDRH+ ++SSK R LNV LVVGDC+LVG QPILV+ 
Sbjct: 5   VMECSVCHS--KLVSPSSKTISRAYDRHKSRISSKQRALNVFLVVGDCVLVGFQPILVYM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL 120
           +KVDG F FSP+SVNFLTE  KVFFAIVMLLLQARH+KVGEK LLS ST  QAARNNVLL
Sbjct: 63  SKVDGKFNFSPISVNFLTEITKVFFAIVMLLLQARHQKVGEKPLLSISTFMQAARNNVLL 122

Query: 121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
           AVPA LYAINNYLKFIMQLYFNPATVKMLSNLKV VIALLLK+IMKRRFSIIQWEALALL
Sbjct: 123 AVPALLYAINNYLKFIMQLYFNPATVKMLSNLKVLVIALLLKVIMKRRFSIIQWEALALL 182

Query: 181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
           LIGISVNQLRSLPEGT+ALGLPV  GAY YTLIFVTVPSLASV+NEYALKSQYDTSIY Q
Sbjct: 183 LIGISVNQLRSLPEGTTALGLPVTMGAYAYTLIFVTVPSLASVYNEYALKSQYDTSIYLQ 242

Query: 241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
           NLFLYGYGAIFNFLGI+ T + KGPSSFDILQGHSKATMLLI NNAAQGILSSFFFKYAD
Sbjct: 243 NLFLYGYGAIFNFLGILGTVVVKGPSSFDILQGHSKATMLLIANNAAQGILSSFFFKYAD 302

Query: 301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIS 360
           TILKKYSSTVATIFTG+ASA LFGHTLTMNF++GISIVFISMHQFFSPLSKVKDE +N  
Sbjct: 303 TILKKYSSTVATIFTGIASAVLFGHTLTMNFVIGISIVFISMHQFFSPLSKVKDE-QNGV 361

Query: 361 LESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 402
           LE  D    +RSK+ SFI MAAGANE+A+HR  ++E+ PLLP
Sbjct: 362 LELHDVHDKQRSKE-SFINMAAGANEEATHRVGHDERQPLLP 402

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808016|ref|NP_001242719.1| uncharacterized protein LOC100815055 [Glycine max] gi|255636089|gb|ACU18389.1| unknown [Glycine max]

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/402 (81%), Positives = 357/402 (88%), Gaps = 4/402 (0%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           ++ECSVCHS  +L +   KT+SRAYDRH+ ++SSK R LNV LVVGDC+LVG Q ILV+ 
Sbjct: 5   IMECSVCHS--KLVSPSAKTISRAYDRHKSRISSKQRALNVFLVVGDCVLVGFQSILVYM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL 120
           +KVDG F FSP+SVNFLTE  KVFFAIVMLLLQARH+KVGEK LLS ST  QAARNNVLL
Sbjct: 63  SKVDGKFNFSPISVNFLTEITKVFFAIVMLLLQARHQKVGEKPLLSISTFVQAARNNVLL 122

Query: 121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
           AVPA LYAINNYLKFIMQLYFNPATVKMLSNLKV VIALLLK+IMKRRFSIIQWEALALL
Sbjct: 123 AVPALLYAINNYLKFIMQLYFNPATVKMLSNLKVLVIALLLKVIMKRRFSIIQWEALALL 182

Query: 181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
           LIGISVNQLRSLPEGT+ALGLPV  GAY+YTLIFVTVPSLASV+NEYALKSQYDTSIY Q
Sbjct: 183 LIGISVNQLRSLPEGTTALGLPVTMGAYIYTLIFVTVPSLASVYNEYALKSQYDTSIYLQ 242

Query: 241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
           NLFLYGYGAIFNFLGI+ T + KGPSSFDILQGHSKATMLLI NNAAQGILSSFFFKYAD
Sbjct: 243 NLFLYGYGAIFNFLGILGTVVVKGPSSFDILQGHSKATMLLIANNAAQGILSSFFFKYAD 302

Query: 301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIS 360
           TILKKYSSTVATIFTG+ASA LFGHTLT+NF++GISIVFISMHQFFSPLSKVKDE +N  
Sbjct: 303 TILKKYSSTVATIFTGIASAVLFGHTLTLNFVIGISIVFISMHQFFSPLSKVKDE-QNGV 361

Query: 361 LESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 402
           LE  D    +RSK+ SFI MAAGANE+A+HR  ++E+ PLLP
Sbjct: 362 LELHDVHDKQRSKE-SFINMAAGANEEATHRVGHDERQPLLP 402

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445115|ref|XP_003592835.1| UDP-galactose transporter [Medicago truncatula] gi|355481883|gb|AES63086.1| UDP-galactose transporter [Medicago truncatula]

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/426 (75%), Positives = 361/426 (84%), Gaps = 27/426 (6%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS L +     KTVSRAYDRH+++++SK R LN+ LV GDC+LVG QPILV+ 
Sbjct: 9   MIECSVCHSKL-VSPAATKTVSRAYDRHKNRITSKQRVLNILLVGGDCMLVGFQPILVYM 67

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL 120
           +KVDG F FSP+SVNFLTE  KVFFAIVMLLLQAR++KVG+K LLS ST  QAARNNVLL
Sbjct: 68  SKVDGKFNFSPISVNFLTEITKVFFAIVMLLLQARNQKVGDKPLLSISTFMQAARNNVLL 127

Query: 121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
           AVPAFLYAINNYLKF+MQLYFNPATVKMLSNLKV VIALLLK++MKRRFSIIQWEALALL
Sbjct: 128 AVPAFLYAINNYLKFVMQLYFNPATVKMLSNLKVLVIALLLKVVMKRRFSIIQWEALALL 187

Query: 181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSI--- 237
           LIGISVNQLRSLPEGT+ALGLPV  GAY+YT IFVTVPS+ASV+NEYALKSQYDTSI   
Sbjct: 188 LIGISVNQLRSLPEGTTALGLPVTMGAYVYTFIFVTVPSMASVYNEYALKSQYDTSIYLQ 247

Query: 238 ---------------------YHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSK 276
                                Y QNLFLYGYGA+FNFLGIV+TA+FKGPSSFDIL+GHSK
Sbjct: 248 VKYDTFNCFNIYIIDANSLFFYLQNLFLYGYGAMFNFLGIVVTAIFKGPSSFDILEGHSK 307

Query: 277 ATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGIS 336
           ATMLLI NNAAQGILSSFFFKYADTILKKYSSTVATIFTG+ASA LFGH LTMNF++GIS
Sbjct: 308 ATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAVLFGHKLTMNFLIGIS 367

Query: 337 IVFISMHQFFSPLSKVKDEPKNISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEE 396
           IVFISMHQFFSPLSKV+DE +N +LE  D  + +RSKD SF+ MAAGANE+ASHR  ++E
Sbjct: 368 IVFISMHQFFSPLSKVRDE-QNGALELHDVQEKQRSKD-SFLNMAAGANEEASHRVGHDE 425

Query: 397 KAPLLP 402
           + PLLP
Sbjct: 426 RQPLLP 431

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446225|ref|XP_004140872.1| PREDICTED: CMP-sialic acid transporter 2-like [Cucumis sativus]

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/402 (80%), Positives = 351/402 (87%), Gaps = 5/402 (1%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS L   T  G  +SRAYDRH+ +VSSK R LN  LVVGDCILVGLQPILV+ 
Sbjct: 5   MIECSVCHSKLVSPTTKG--ISRAYDRHKIRVSSKQRALNTLLVVGDCILVGLQPILVYM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL 120
           +KVDG F FSP+SVNFLTE  KV FAIVML+LQARH+KVGEK LLS ST  QAARNNVLL
Sbjct: 63  SKVDGKFMFSPISVNFLTEIAKVIFAIVMLILQARHQKVGEKPLLSISTFMQAARNNVLL 122

Query: 121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
           AVPAFLYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK+IM+RRFSIIQWEALALL
Sbjct: 123 AVPAFLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKVIMRRRFSIIQWEALALL 182

Query: 181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
           LIGISVNQLRSLPEG   LGL V  GAY+YTLIFVTVPSLASV+NEYALKSQYDTSIY Q
Sbjct: 183 LIGISVNQLRSLPEGAPNLGLTVTMGAYVYTLIFVTVPSLASVYNEYALKSQYDTSIYLQ 242

Query: 241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
           NLFLYGYGAIFNF+GI+ T + KGPSSFDILQGHSKATMLLI NNAAQGILSSFFFKYAD
Sbjct: 243 NLFLYGYGAIFNFMGILGTVIMKGPSSFDILQGHSKATMLLIANNAAQGILSSFFFKYAD 302

Query: 301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIS 360
           TILKKYSSTVATIFTG+ASAALFGHTLTMNF+LGISIVFISMHQFFSPLSKVKDE   ++
Sbjct: 303 TILKKYSSTVATIFTGIASAALFGHTLTMNFVLGISIVFISMHQFFSPLSKVKDEQNGMT 362

Query: 361 LESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 402
            E VD   N+RSK  SFI +AAGAN++ASH   ++E+ PLLP
Sbjct: 363 -EMVDV-DNQRSKG-SFINIAAGANDEASHLVGSDERKPLLP 401

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577789|ref|XP_002529769.1| conserved hypothetical protein [Ricinus communis] gi|223530767|gb|EEF32635.1| conserved hypothetical protein [Ricinus communis]

 Score =  639 bits (1648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/389 (82%), Positives = 348/389 (89%), Gaps = 3/389 (0%)

Query: 1   MIECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFT 60
           MIECSVCHS  +L +   KTVSRAYDRH+ +VSSK R LNV LVVGDCILVGLQPILV+ 
Sbjct: 5   MIECSVCHS--KLVSPSAKTVSRAYDRHKSRVSSKLRALNVFLVVGDCILVGLQPILVYM 62

Query: 61  TKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL 120
           +KVDG F FSPVSVNFLTEA KV FAIVMLLLQAR +KVGEK LLS ST  QAARNNVLL
Sbjct: 63  SKVDGKFNFSPVSVNFLTEAAKVLFAIVMLLLQARSQKVGEKPLLSISTFVQAARNNVLL 122

Query: 121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
           AVPAFLYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLKIIM+RRFSI+QWEALALL
Sbjct: 123 AVPAFLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKIIMRRRFSILQWEALALL 182

Query: 181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
           LIGISVNQLRSLPEG +A G+P+AT AY+YTL+FVTVPSLASV+NEYALKSQY+TSIY Q
Sbjct: 183 LIGISVNQLRSLPEGATATGIPLATIAYVYTLVFVTVPSLASVYNEYALKSQYETSIYLQ 242

Query: 241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
           NLFLYGYGAIFNFLGI+ T + KGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD
Sbjct: 243 NLFLYGYGAIFNFLGILATVIVKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 302

Query: 301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNIS 360
           TILKKYSSTVATIFTG+ASAALFGHTLTMNF+LGISIVFISMHQFFS LSK KDE +N +
Sbjct: 303 TILKKYSSTVATIFTGIASAALFGHTLTMNFLLGISIVFISMHQFFSSLSKAKDEQQNGT 362

Query: 361 LESVDSPKNKRSKDTSFIGMAAGANEDAS 389
           +E +D   + RSKD SFI MAAGANE+ +
Sbjct: 363 VELMDVQDDHRSKD-SFINMAAGANEEQT 390

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820766|ref|XP_002878266.1| UDP-galactose transporter 6 [Arabidopsis lyrata subsp. lyrata] gi|297324104|gb|EFH54525.1| UDP-galactose transporter 6 [Arabidopsis lyrata subsp. lyrata]

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 314/401 (78%), Positives = 355/401 (88%), Gaps = 4/401 (0%)

Query: 3   ECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTK 62
           ECSVCHS  +L + G KT+SRAYD H+ +VSSK R LNV LVVGDC+LVGLQP+LV+ +K
Sbjct: 7   ECSVCHS--KLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLVYMSK 64

Query: 63  VDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAV 122
           VDG F FSP+SVNFLTE  KV FAIVMLL+QARH+KVGEK LLS ST  QAARNNVLLAV
Sbjct: 65  VDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNVLLAV 124

Query: 123 PAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLI 182
           PA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK++MKRRFSIIQWEALALLLI
Sbjct: 125 PALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSIIQWEALALLLI 184

Query: 183 GISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNL 242
           GISVNQLRSLPEG +A+G+P+ATGAY+ T+IFVTVPS+ASVFNEYALKSQYDTSIY QNL
Sbjct: 185 GISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKSQYDTSIYLQNL 244

Query: 243 FLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTI 302
           FLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQGILSSFFFKYADTI
Sbjct: 245 FLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKYADTI 304

Query: 303 LKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDE-PKNISL 361
           LKKYSSTVATIFTG+ASAALFGH +TMNF+LGISIVFISMHQFFSPL+KV+DE  +N +L
Sbjct: 305 LKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQFFSPLAKVRDEQQQNGNL 364

Query: 362 ESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 402
           E V++    R+ D SFI MAAGANE+ASHR  ++++ PLLP
Sbjct: 365 ELVNAKDTHRAND-SFINMAAGANEEASHRGESDDRTPLLP 404

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	403
TAIR|locus:2081292	405	UTR6 "UDP-galactose transporte	0.985	0.980	0.770	2.5e-159
TAIR|locus:2040976	406	AT2G43240 [Arabidopsis thalian	0.990	0.982	0.764	9.9e-158
TAIR|locus:2152955	340	AT5G41760 [Arabidopsis thalian	0.741	0.879	0.318	7.8e-39
TAIR|locus:504955503	352	AT4G35335 [Arabidopsis thalian	0.707	0.809	0.315	2.3e-32
UNIPROTKB|F1NDA7	299	SLC35A4 "Uncharacterized prote	0.712	0.959	0.290	2.4e-28
ZFIN|ZDB-GENE-061103-595	314	slc35a4 "solute carrier family	0.734	0.942	0.273	2e-24
UNIPROTKB|F1NTH1	432	SLC35A5 "Uncharacterized prote	0.374	0.349	0.3	4.2e-23
FB|FBgn0031676	388	CG14040 [Drosophila melanogast	0.434	0.451	0.302	7.9e-23
UNIPROTKB|G5EFD3	328	srf-3 "Protein SRF-3, isoform	0.699	0.859	0.263	2.4e-22
UNIPROTKB|Q8MIA3	324	SLC35A4 "Probable UDP-sugar tr	0.682	0.848	0.305	3.1e-22

TAIR|locus:2081292 UTR6 "UDP-galactose transporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1552 (551.4 bits), Expect = 2.5e-159, P = 2.5e-159
 Identities = 309/401 (77%), Positives = 351/401 (87%)

Query:     3 ECSVCHSTLELETVGGKTVSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTK 62
             EC  CHS  +L + G KT+SRAYD H+ +VSSK R LNV LVVGDC+LVGLQP+LV+ +K
Sbjct:     7 ECPACHS--KLVSPGSKTISRAYDDHKIRVSSKQRVLNVLLVVGDCMLVGLQPVLVYMSK 64

Query:    63 VDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAV 122
             VDG F FSP+SVNFLTE  KV FAIVMLL+QARH+KVGEK LLS ST  QAARNNVLLAV
Sbjct:    65 VDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNVLLAV 124

Query:   123 PAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLI 182
             PA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK++MKRRFSIIQWEALALLLI
Sbjct:   125 PALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSIIQWEALALLLI 184

Query:   183 GISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNL 242
             GISVNQLRSLPEG +A+G+P+ATGAY+ T+IFVTVPS+ASVFNEYALKSQYDTSIY QNL
Sbjct:   185 GISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYALKSQYDTSIYLQNL 244

Query:   243 FLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTI 302
             FLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQGILSSFFFKYADTI
Sbjct:   245 FLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKYADTI 304

Query:   303 LKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPK-NISL 361
             LKKYSSTVATIFTG+ASAALFGH +TMNF+LGISIVFISMHQFFSPL+K +DE + N +L
Sbjct:   305 LKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQFFSPLAKARDEQQQNGNL 364

Query:   362 ESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 402
             E + + K+    + SFI MAAGANE+ASHR  ++++ PLLP
Sbjct:   365 E-LGNTKDTHRANESFINMAAGANEEASHRGESDDRTPLLP 404

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2040976 AT2G43240 [Arabidopsis thaliana (taxid:3702)]

 Score = 1537 (546.1 bits), Expect = 9.9e-158, P = 9.9e-158
 Identities = 309/404 (76%), Positives = 347/404 (85%)

Query:     1 MIECSVCHSTLELETVGGKTVSRAYDRHRHQ--VSSKTRFLNVALVVGDCILVGLQPILV 58
             M ECSVC S   L +   K +SRAYD + ++  VSSK R LNV LVVGDC+LVGLQP+LV
Sbjct:     5 MAECSVCRS--RLVSPSSKAISRAYDNYNYKIRVSSKQRALNVFLVVGDCMLVGLQPVLV 62

Query:    59 FTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNV 118
             + +KVDG F FSP+SVNFLTE  KV FA+VMLL QARH+KVGEK LLS ST  QAARNN+
Sbjct:    63 YMSKVDGKFNFSPISVNFLTEIAKVIFAMVMLLFQARHQKVGEKPLLSLSTFVQAARNNM 122

Query:   119 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALA 178
             LLAVPA LYAINNYLKF MQLYFNPATVKMLSNLKV VIA+LLK+IMKRRFSIIQWEALA
Sbjct:   123 LLAVPAGLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMIMKRRFSIIQWEALA 182

Query:   179 LLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIY 238
             LLLIGIS+NQLRSLPEG + + +P+ATGAY+ T IFVTVPSLASV+NEYALKSQYDTSIY
Sbjct:   183 LLLIGISINQLRSLPEGATTVAVPIATGAYICTFIFVTVPSLASVYNEYALKSQYDTSIY 242

Query:   239 HQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKY 298
              QNLFLYGYGAIFNFLGI+ T ++KGP SFDILQGHS+ATM LI NNAAQGILSSFFFKY
Sbjct:   243 LQNLFLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKY 302

Query:   299 ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKN 358
             ADTILKKYSSTVATIFTG+ASAALFGH LTMNF+LGISIVFISMHQFFSPLSK KDE +N
Sbjct:   303 ADTILKKYSSTVATIFTGIASAALFGHILTMNFLLGISIVFISMHQFFSPLSKAKDEQQN 362

Query:   359 ISLESVDSPKNKRSKDTSFIGMAAGANEDASHRAVNEEKAPLLP 402
              ++E VD+    R+KD SFI MAAGA E+ASHR  ++++ PLLP
Sbjct:   363 GNIELVDAKDGHRAKD-SFINMAAGATEEASHRIESDDRVPLLP 405

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS

TAIR|locus:2152955 AT5G41760 [Arabidopsis thaliana (taxid:3702)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 100/314 (31%), Positives = 169/314 (53%)

Query:    49 ILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFS 108
             IL   Q IL   ++ DGG+K+   +V FL E   VF  I+  L   R  +    +    +
Sbjct:    15 ILTSSQGILTTLSQSDGGYKYDYATVPFLAE---VFKLIISGLFLWREMRTSSSTTSRIT 71

Query:   109 TIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRR 168
             T  ++ R   L  +P+ +Y I+N ++F    Y + +T +++ NLK+    +L ++ +KR+
Sbjct:    72 TDWKSVR---LFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLKRK 128

Query:   169 FSIIQWEALALLLIGISVNQLRSLPEGT--SALGLPVATGAYLYTLIFVTVPSLASVFNE 226
              S +QW A+ LL +G + +Q++   E +  S    P+    YL  ++   + +LA ++ E
Sbjct:   129 LSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQ--GYLLGILSAGLSALAGIYTE 186

Query:   227 YALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAM---F-KGPSSFDILQGHSKATMLLI 282
             + +K   DT +Y QNL LY +G++FN   ++       F KGP    I  G+S  T L++
Sbjct:   187 FLMKRNNDT-LYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVV 245

Query:   283 CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISM 342
              N  + G+L S+  KYAD I+K YS+++A + T +AS  LF    T+   LGI I  +S+
Sbjct:   246 LNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSL 305

Query:   343 HQFFSPLSKVKDEP 356
             H +F+P   + D P
Sbjct:   306 HMYFAPPHTLVDLP 319

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005456 "CMP-N-acetylneuraminate transmembrane transporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015780 "nucleotide-sugar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=ISS;IDA

GO:0015136 "sialic acid transmembrane transporter activity" evidence=IDA

GO:0015739 "sialic acid transport" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

TAIR|locus:504955503 AT4G35335 [Arabidopsis thaliana (taxid:3702)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 93/295 (31%), Positives = 152/295 (51%)

Query:    49 ILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFS 108
             IL   Q IL+  +K  G +++S  + NFL   +K   +++ L    +++ V + + LS +
Sbjct:    60 ILTSSQAILIVWSKRAGKYEYSVTTANFLVGTLKCALSLLALTRIWKNEGVTDDNRLS-T 118

Query:   109 TIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRR 168
             T  +      +  +PA LY   N L++ +  Y +    ++L NL +    +L +II+KR+
Sbjct:   119 TFDEVK----VFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKRK 174

Query:   169 FSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA 228
              S IQW    LL  G +  QL S  +      LP  T A +  L+       A V+ E  
Sbjct:   175 LSEIQWAGFILLCCGCTTAQLNSNSDRVLQTSLPGWTMAIVMALL----SGFAGVYTEAI 230

Query:   229 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQ 288
             +K +   +I  QN +LY +G  FN + IVI   F   ++     G+S  T+L+I N+A  
Sbjct:   231 IKKRPSRNINVQNFWLYVFGMAFNAVAIVIQD-FDAVANKGFFHGYSFITLLMILNHALS 289

Query:   289 GILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMH 343
             GI  S   KYAD I+K YS++VA + T + S  LF   L++ F LG ++V +S++
Sbjct:   290 GIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSVY 344

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|F1NDA7 SLC35A4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 90/310 (29%), Positives = 162/310 (52%)

Query:    43 LVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEK 102
             +++    + G    L+   KVDG   FS  SV  L E  K+  +++ LL   R + +G  
Sbjct:     4 MLLSSVAIYGSHAPLLTLCKVDGTIPFSSSSVVVLIELTKLVLSLLFLLTWDR-QLLG-- 60

Query:   103 SLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLK 162
             + +S+  +A         A+ A LYA NN L   MQL+ +P+T ++LSNLK+   ALL  
Sbjct:    61 AAVSWHHVAP-------FALSALLYAANNNLVVHMQLFMDPSTYQILSNLKIVSTALLYS 113

Query:   163 IIMKRRFSIIQWEALALLLI-GISVN--QLRSLPEGT---SALGLPVATGAYLYTLIFVT 216
             + +++R  + QW AL LL+  G+S +   LR  P G+   SA+ L +     L   ++  
Sbjct:   114 LFLRQRLRVRQWLALCLLMAAGVSYSCGGLRD-PRGSGSPSAMQLHITLVGLLLISVYCL 172

Query:   217 VPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSK 276
             +  L++V+ E  LK+Q    +  QN+FLY +G + N +G   ++  +G      L+G S 
Sbjct:   173 ISGLSAVYTEAILKTQA-LPLNLQNIFLYFFGVLVNLVGHFWSSTERG-----FLEGFSF 226

Query:   277 ATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGIS 336
               ++++ + A  G++ S   K++  I + +  + + +   L S ALF   LT+ F + +S
Sbjct:   227 WVLVIVVSQALNGLIMSVVMKHSSNITRLFVISCSILVNALLSVALFNLQLTLLFFIAVS 286

Query:   337 IVFISMHQFF 346
              + +++H ++
Sbjct:   287 CIGLAVHLYY 296

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-061103-595 slc35a4 "solute carrier family 35, member A4" [Danio rerio (taxid:7955)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 86/314 (27%), Positives = 144/314 (45%)

Query:    35 KTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQA 94
             + R+L + L++   ++ G    L+   K      FS  S   L E  K+F +   LL   
Sbjct:    18 RLRWLFLLLLL--VLIYGSHAPLLSLCKTQAQIPFSASSCVLLIETSKLFISFASLLAS- 74

Query:    95 RHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKV 154
                  G  S L  S     A      AVPA LYA NN+L   MQ Y +P++ ++LSNLK+
Sbjct:    75 -----GSVSTLRISISMTTASP---YAVPAVLYAFNNHLVVFMQAYMDPSSFQVLSNLKI 126

Query:   155 FVIALLLKIIMKRRFSIIQWEALALLL-IGISVNQLRSLPEGTSALGLPVATGAYLYTLI 213
                ALL    + +R    QW A+ LL+  G+S +      EG     + + +   L  L+
Sbjct:   127 ASTALLYTSCLGKRLHRRQWFAMGLLVSAGVSHSCFSYDLEGKQETAVYITSWGLLLVLV 186

Query:   214 FVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQG 273
             +  V  LA+V+ E  LKSQ    +  QNLFLY +G + N     + +   G       +G
Sbjct:   187 YCFVSGLAAVYTERVLKSQR-LPLSMQNLFLYAFGVVVN-----LASHLSGGEQKGFFEG 240

Query:   274 HSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFIL 333
             +S    +++    A G+L S   K+   I + +  + A +   + S  + G  LT  F+ 
Sbjct:   241 YSAVVWVIVAGQVANGLLMSVVMKHGTGITRLFVISSAMLVNAVLSWGILGVQLTGYFLF 300

Query:   334 GISIVFISMHQFFS 347
              + ++  +++ +++
Sbjct:   301 PVVLIGWAVYLYYT 314

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|F1NTH1 SLC35A5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 193 (73.0 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
 Identities = 48/160 (30%), Positives = 83/160 (51%)

Query:    29 RHQVSSKTRFLNVALVVGDCILVGLQPILV--FTTKVDGGFKFSPVSVNFLTEAVKVFFA 86
             R  V SKT      L+ G  I +G   IL+  ++   D  + + P +VN  +E VK+F  
Sbjct:     9 RSAVCSKTTIYTF-LLGGVFITLGSSRILLMKYSANEDNKYDYLPTTVNICSEVVKLFLC 67

Query:    87 IVMLLLQARHKKVGEK--SLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPA 144
             +V+ L   + +   ++    LS+        N++  ++PAFLY ++N + F +  Y  PA
Sbjct:    68 VVLALWVKKKEGCLDRPSGCLSWKNFC----NSMKWSIPAFLYFLDNLIVFYVLSYLQPA 123

Query:   145 TVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGI 184
                + SN  +   ALL +I++KR+ S +QW +L +L + I
Sbjct:   124 MAVLFSNFVIITTALLFRIVLKRKLSWVQWASLVILFLSI 163

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0031676 CG14040 [Drosophila melanogaster (taxid:7227)]

 Score = 180 (68.4 bits), Expect = 7.9e-23, Sum P(2) = 7.9e-23
 Identities = 56/185 (30%), Positives = 101/185 (54%)

Query:   196 TSALGLPVATGAYLYTLIFV---TVPS-LASVFNEYALKSQ-YDTSIYHQNLFLYGYGAI 250
             T A G  ++   +  + +F+   T+ S LA V+NEY LK +  D +I+ QN+F+Y    +
Sbjct:   190 THAHGKNMSGFDFSLSAVFILAQTICSCLAGVYNEYLLKDKGADVNIFVQNVFMYLDSIV 249

Query:   251 FNFLGIVITAMFKGPSSFDILQGHSK-ATMLLICNNAAQGILSSFFFKYADTILKKYSST 309
              N + +++        S   L    + + +++I NNAA GI++SFF KY ++ILK ++S 
Sbjct:   250 CNAVILLLRGELLDAFSPQNLGSIMRFSVLIIIVNNAAIGIVTSFFLKYMNSILKTFASA 309

Query:   310 VATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF-SPLSKV-KDEP-KNISLESVDS 366
             +  +FT +    LF   + MN  L I++V  +++ +  SP+  + K  P  N+S ++   
Sbjct:   310 LELLFTAVLCYFLFSIPIYMNTALAIAVVSYAIYLYTQSPVVNLGKVRPLSNLS-DATTK 368

Query:   367 PKNKR 371
               +KR
Sbjct:   369 STDKR 373

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=NAS

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005797 "Golgi medial cisterna" evidence=IDA

UNIPROTKB|G5EFD3 srf-3 "Protein SRF-3, isoform b" [Caenorhabditis elegans (taxid:6239)]

 Score = 261 (96.9 bits), Expect = 2.4e-22, P = 2.4e-22
 Identities = 77/292 (26%), Positives = 143/292 (48%)

Query:    62 KVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFST-IAQAARNNVLL 120
             +VD  F  S V+V +LTE +K F   + L L A+ ++   + + +  T I +   + + +
Sbjct:    27 EVDAMF-VSTVAV-WLTEVIKCF---ICLFLVAQ-EETPRRFIHALRTQILEQPYDTLKV 80

Query:   121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL 180
              +PA +Y + N L ++   + + AT  + S LK+F  A+   II++R  +  QW ALA+L
Sbjct:    81 CIPAMIYIVQNNLFYVAASHLDAATFMITSQLKIFTAAIFTVIILRRSLNRTQWFALAVL 140

Query:   181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQ 240
              +G+S+ QL+      S+   P     ++  ++   +   A ++ E  LK     S++ +
Sbjct:   141 FVGVSLVQLQGTKAKESSGESPFV--GFVAVVVACCLSGFAGIYFEKILKGSAPVSLWMR 198

Query:   241 NLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYAD 300
             N+ +  +    +F  I +    K  + + +L G      L +      G+  +   KYAD
Sbjct:   199 NVQMAVFSIPASFSAIYMQDS-KTVNEYGLLYGFDSIVWLTVLWYGVGGLSVAVCIKYAD 257

Query:   301 TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV 352
              I K ++++VA I + + S  LF    +  F+LG S+V  S+  + S  S V
Sbjct:   258 NIAKNFATSVAIILSTIGSIFLFDFIPSFTFLLGASLVIFSIFLYSSHQSMV 309

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

UNIPROTKB|Q8MIA3 SLC35A4 "Probable UDP-sugar transporter protein SLC35A4" [Sus scrofa (taxid:9823)]

 Score = 260 (96.6 bits), Expect = 3.1e-22, P = 3.1e-22
 Identities = 93/304 (30%), Positives = 142/304 (46%)

Query:    55 PILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAA 114
             P+L     VDG   F P S   LTE  K+    + LL       VG ++   +       
Sbjct:    35 PLLALC-HVDGRVPFRPSSAVLLTELTKLLLCALSLL-------VGWQA---WPPRTPPW 83

Query:   115 RNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQW 174
             R     A+ A LY  NN L   +Q Y +P+T ++LSNLK+   AL   + ++RR S  Q 
Sbjct:    84 RQAAPFALSALLYGANNNLVIHLQHYMDPSTYQVLSNLKIGSTALFYCLCLRRRLSARQG 143

Query:   175 EALALLLIG---ISVNQLRS----LPEG--TSALG---LPVATGAYLYTLIFVTVPSLAS 222
              AL LL+      +   LR     LPE   T+A G   L V     L  L++  +  L+S
Sbjct:   144 LALLLLMAAGACYAAGGLRDPGSPLPESPSTAASGPVPLHVTAPGLLLLLLYCLISGLSS 203

Query:   223 VFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLI 282
             V+ E  LK Q    +  QNLFLY +G + N LG+       GP    +L+G S    L++
Sbjct:   204 VYTELLLKRQR-LPLALQNLFLYTFGVLLN-LGLHAGG---GPGP-GLLEGFSGWAALVV 257

Query:   283 CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISM 342
              + A  G+L S   K+  +I + +  + + +   + SAAL    LT  F L   ++ +++
Sbjct:   258 LSQALNGLLMSAVMKHGSSITRLFVVSCSLVVNAVLSAALLRLQLTAAFFLAALLIGLAV 317

Query:   343 HQFF 346
             H ++
Sbjct:   318 HLYY 321

GO:0016021 "integral to membrane" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8GY97	CSTR2_ARATH	No assigned EC number	0.7648	0.9900	0.9827	no	no
Q9C5H6	CSTR3_ARATH	No assigned EC number	0.765	0.9875	0.9827	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VIII000669 hypothetical protein (408 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	403
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	3e-31
TIGR00803	222	TIGR00803, nst, UDP-galactose transporter	8e-14

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score =  118 bits (299), Expect = 3e-31
 Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 12/225 (5%)

Query: 120 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALAL 179
           +AVPAF+Y + N L ++     + AT ++   LK+   AL   +++ R+ S  QW +L L
Sbjct: 20  VAVPAFIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVLMLGRKLSWYQWASLLL 79

Query: 180 LLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTV----PSLASVFNEYALKSQYDT 235
           L +G+++ QL      T++     A       L  V         A V+ E  LK   +T
Sbjct: 80  LFLGVAIVQLDQKSSETNSKR--GAEQNPGLGLSAVLAACFTSGFAGVYFEKILKGS-NT 136

Query: 236 SIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFD--ILQGHSKATMLLICNNAAQGILSS 293
           SI+ +N+ LY +G  F  L   +     G +  +     G++     ++   A  G++ +
Sbjct: 137 SIWIRNIQLYFFGIFFALLTCWLY---DGSAISEKGFFFGYTAFVWAVVLLQAVGGLVVA 193

Query: 294 FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIV 338
              KYAD ILK +++++A I + +AS  LF    T+ F+LG  +V
Sbjct: 194 VVVKYADNILKGFATSLAIILSTVASVLLFDFRPTLTFLLGAILV 238

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

>gnl|CDD|129885 TIGR00803, nst, UDP-galactose transporter

 Score = 70.1 bits (172), Expect = 8e-14
 Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 5/222 (2%)

Query: 120 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALAL 179
           L+VP  +    N L  I  L    A  K ++ LK+   AL+    +       QW +L L
Sbjct: 2   LSVPIHIIFKQNNLVLIA-LGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKL 60

Query: 180 LLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYH 239
           L +G+++ Q+      T   G PV   + + + +  +    A V+ E  LK   DT  + 
Sbjct: 61  LKLGVAIVQMVQSSAKTLMFGNPVVGLSAVLSALLSSG--FAGVYFEKILKD-GDTMFWS 117

Query: 240 QNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYA 299
           +NL L  +G    F  ++ +      S+F    G+  A  ++   N   G+      +YA
Sbjct: 118 RNLQLPLFGLFSTFSVLLWSDGTL-ISNFGFFIGYPTAVWIVGLLNVGGGLCIGGVVRYA 176

Query: 300 DTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFIS 341
           D   K + + ++ I + LAS  LF   ++  F LG  +VF++
Sbjct: 177 DNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLA 218

The 10-12 TMS Nucleotide Sugar Transporters (TC 2.A.7.10)Nucleotide-sugar transporters (NSTs) are found in the Golgi apparatus and the endoplasmic reticulum of eukaryotic cells. Members of the family have been sequenced from yeast, protozoans and animals. Animals such as C. elegans possess many of these transporters. Humans have at least two closely related isoforms of the UDP-galactose:UMP exchange transporter.NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	403
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	100.0
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	100.0
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.94
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.93
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.91
KOG1581	327	consensus UDP-galactose transporter related protei	99.89
PLN00411	358	nodulin MtN21 family protein; Provisional	99.88
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.86
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.85
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.85
PRK15430	296	putative chloramphenical resistance permease RarD;	99.84
PRK11272	292	putative DMT superfamily transporter inner membran	99.83
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.83
KOG1580	337	consensus UDP-galactose transporter related protei	99.82
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.79
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.75
PRK11689	295	aromatic amino acid exporter; Provisional	99.75
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.72
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.67
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.58
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.52
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.46
KOG1582	367	consensus UDP-galactose transporter related protei	99.43
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.43
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.38
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.34
COG2962	293	RarD Predicted permeases [General function predict	99.31
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.27
KOG2765	416	consensus Predicted membrane protein [Function unk	99.25
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.13
KOG2766	336	consensus Predicted membrane protein [Function unk	99.02
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.94
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.81
COG2510	140	Predicted membrane protein [Function unknown]	98.79
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.67
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.67
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.47
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.46
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.41
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.28
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.13
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.13
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.11
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.06
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.05
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.04
PLN00411	358	nodulin MtN21 family protein; Provisional	97.92
COG2510	140	Predicted membrane protein [Function unknown]	97.9
PRK11689	295	aromatic amino acid exporter; Provisional	97.79
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.75
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.74
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.69
PRK11272	292	putative DMT superfamily transporter inner membran	97.62
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.56
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.53
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.52
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.49
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.46
PRK11431	105	multidrug efflux system protein; Provisional	97.45
COG2076	106	EmrE Membrane transporters of cations and cationic	97.41
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.41
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.34
PRK15430	296	putative chloramphenical resistance permease RarD;	97.11
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	97.06
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.96
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.95
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.94
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.81
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.62
PF13536	113	EmrE: Multidrug resistance efflux transporter	96.61
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.59
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.58
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.52
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.47
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.46
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.23
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.04
COG2076	106	EmrE Membrane transporters of cations and cationic	95.93
PRK11431	105	multidrug efflux system protein; Provisional	95.92
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.81
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.54
PRK13499	345	rhamnose-proton symporter; Provisional	95.44
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.15
KOG1581	327	consensus UDP-galactose transporter related protei	95.03
COG2962	293	RarD Predicted permeases [General function predict	94.85
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	94.7
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.38
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	93.97
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	93.78
PRK13499	345	rhamnose-proton symporter; Provisional	93.73
KOG1580	337	consensus UDP-galactose transporter related protei	93.0
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	92.28
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	86.66
KOG2922	335	consensus Uncharacterized conserved protein [Funct	84.46
KOG4510	346	consensus Permease of the drug/metabolite transpor	82.55
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	80.14

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.5e-59  Score=449.74  Aligned_cols=317  Identities=31%  Similarity=0.486  Sum_probs=262.4

Q ss_pred             ccccCCcccc---hhHHHHHHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 015676           24 AYDRHRHQVS---SKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVG  100 (403)
Q Consensus        24 ~~~~~~~~~~---~k~~~l~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~  100 (403)
                      ++|+|.....   .|+.++.++-++.+.     ++.++++++.+++++|.|+++||++|++|+++|..+++++.+..  .
T Consensus         2 ~~~~~~~~~~~~~~k~~~l~~~t~~~~~-----l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~--~   74 (345)
T KOG2234|consen    2 AVKSMPIISSLSQMKYLSLIVLTAQNTA-----LTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKY--A   74 (345)
T ss_pred             CcccccccccHHHHHHHHHHHHHHHHhh-----HHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHH--h
Confidence            4444443344   444444444333333     55567777766688999999999999999999999999886441  1


Q ss_pred             cccchhH-HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q 015676          101 EKSLLSF-STIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALAL  179 (403)
Q Consensus       101 ~~~~~~~-~~~~~~~r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~l  179 (403)
                      +++..+. ++++..+|+++++++||++|++|||++|++++|+||+|||+++|+|+++||+|++++|+||++++||.|+++
T Consensus        75 ~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~l  154 (345)
T KOG2234|consen   75 KKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVL  154 (345)
T ss_pred             hhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence            1222222 345556779999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCC-CCC-CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHH
Q 015676          180 LLIGISVNQLRSLPE-GTS-ALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIV  257 (403)
Q Consensus       180 l~~Gv~lv~~~~~~~-~~~-~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l  257 (403)
                      +++|++++|.+.... ++. .........|+.+++.+|++||+||||+||++|+. +.+.|+||+|||++|+++++..+.
T Consensus       155 L~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s-~~s~wi~NiqL~~~g~~f~~l~~~  233 (345)
T KOG2234|consen  155 LFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS-NVSLWIRNIQLYFFGILFNLLTIL  233 (345)
T ss_pred             HHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999543221 111 11112346799999999999999999999999987 789999999999999999998876


Q ss_pred             HHHhhcCCC--ccccccCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHH
Q 015676          258 ITAMFKGPS--SFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGI  335 (403)
Q Consensus       258 ~~~~~~g~~--~~~~~~g~~~~~~~~il~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~  335 (403)
                      ..   +++.  ..|+|+||++.+|++++++|+||+++++++||+|||.|+|++++++++++++|+++||.+||..+++|+
T Consensus       234 ~~---d~~~i~~~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~  310 (345)
T KOG2234|consen  234 LQ---DGEAINEYGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGA  310 (345)
T ss_pred             hc---cccccccCCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence            53   3332  468999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCCCc
Q 015676          336 SIVFISMHQFFSPLSK  351 (403)
Q Consensus       336 ~lVi~gv~ly~~~~~k  351 (403)
                      .+|+.++++|+..+.+
T Consensus       311 ~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  311 LLVILSIFLYSLYPAR  326 (345)
T ss_pred             HHHHHHHHHhhcCCcc
Confidence            9999999999954443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=100.00  E-value=2.1e-44  Score=341.94  Aligned_cols=228  Identities=32%  Similarity=0.529  Sum_probs=201.0

Q ss_pred             HHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015676          109 TIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  188 (403)
Q Consensus       109 ~~~~~~r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~  188 (403)
                      +.+...|+.+++++||++|++||++.|++++++||++||+++|+|+++||++++++||||++++||+|++++++|+++++
T Consensus         9 ~~~~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~   88 (244)
T PF04142_consen    9 EVWKSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQ   88 (244)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheee
Confidence            45566788899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCC--CCC------CChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 015676          189 LRSLPEGTS--ALG------LPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITA  260 (403)
Q Consensus       189 ~~~~~~~~~--~~~------~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~  260 (403)
                      .++....+.  ...      ......|++++++++++||+++||+||++|++ +.|+|.||+|||++|++++++......
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~-~~s~~~~N~qL~~~gi~~~~~~~~~~~  167 (244)
T PF04142_consen   89 LSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS-NVSLWIQNMQLYLFGILFNLLALLLSD  167 (244)
T ss_pred             cCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            876533111  011      12345799999999999999999999999997 689999999999999999987754311


Q ss_pred             hhcCCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 015676          261 MFKGPSSFDILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIV  338 (403)
Q Consensus       261 ~~~g~~~~~~~~g~~~~~~~~il~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lV  338 (403)
                       .+.....|+|+||++++|.+++.+|+||+++++++||+|||.|+|++++++++++++|+++||.++|..+++|+.+|
T Consensus       168 -~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  168 -GSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             -ccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence             11113458999999999999999999999999999999999999999999999999999999999999999998875

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>TIGR00803 nst UDP-galactose transporter

Probab=99.94  E-value=4.7e-26  Score=213.40  Aligned_cols=219  Identities=25%  Similarity=0.335  Sum_probs=189.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 015676          120 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSAL  199 (403)
Q Consensus       120 ~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~  199 (403)
                      +.+|+..|+.+|++.++++.+.++..++.. |.|++.++++....++++++..||.++.++..|+..++.++........
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~   80 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF   80 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence            578999999999999999999999999999 9999999999999999999999999999999999988765432111111


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCC--CccccccCChhH
Q 015676          200 GLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGP--SSFDILQGHSKA  277 (403)
Q Consensus       200 ~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~--~~~~~~~g~~~~  277 (403)
                      |  ....|..+.+.++++++++++|.|+.+|++ +...|.+|+++++++.+.+......   .+++  ...+++++++..
T Consensus        81 g--~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~-~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  154 (222)
T TIGR00803        81 G--NPVVGLSAVLSALLSSGFAGVYFEKILKDG-DTMFWSRNLQLPLFGLFSTFSVLLW---SDGTLISNFGFFIGYPTA  154 (222)
T ss_pred             c--cHHHHHHHHHHHHHHHhhhHHHHHHcccCC-CCchHHHHHHHHHHHHHHHHHHHhh---cccchhhccCcccCCchH
Confidence            2  345677888899999999999999998876 6779999999999998866544332   1111  123567899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 015676          278 TMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  345 (403)
Q Consensus       278 ~~~~il~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly  345 (403)
                      +|.+++.++++|+++++++||.|+++|+++++++++++.++|+++||++++..+++|+.+|+.|+++|
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999887

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.93  E-value=2.1e-23  Score=204.55  Aligned_cols=291  Identities=18%  Similarity=0.226  Sum_probs=214.0

Q ss_pred             HHHHHHHhhhhhhhh-ccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHHHHH
Q 015676           45 VGDCILVGLQPILVF-TTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVP  123 (403)
Q Consensus        45 ~~~~~~~~~~~il~~-~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~vp  123 (403)
                      .+....+.+.+++++ ..+.+...+ .+..+.+++.+.-.+++.......+++. ....|             ...++++
T Consensus         6 ~~i~~~~~~~g~~qE~i~~~~~~~~-~~~~lt~~q~~~~~~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~   70 (303)
T PF08449_consen    6 AGIFGGCCSYGILQEKIMTTPYGSP-FPLFLTFVQFAFNALFSFILLSLFKFPK-SRKIP-------------LKKYAIL   70 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCc-ccHHHHHHHHHHHHHHHHHHHHhccccC-CCcCh-------------HHHHHHH
Confidence            333444444555664 233322212 3567889999888888877665444111 11111             2367899


Q ss_pred             HHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC-C
Q 015676          124 AFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGL-P  202 (403)
Q Consensus       124 Ally~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~~~-~  202 (403)
                      ++++.+.+.+.+.+++|+|.+++++++++|++++++++++++|||++++||+++++.++|+++....+..++...... .
T Consensus        71 ~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~  150 (303)
T PF08449_consen   71 SFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSF  150 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999877654222111111 1


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCC--CccccccCChhHHH-
Q 015676          203 VATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGP--SSFDILQGHSKATM-  279 (403)
Q Consensus       203 ~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~--~~~~~~~g~~~~~~-  279 (403)
                      ....|+++++++.+++|+.++|+||+++++ +.+.+....+..+++.++.++....-  ..++  +...+...++...+ 
T Consensus       151 ~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~-~~~~~~~mfy~n~~~~~~~~~~~~~l--~~~~~~~~~~f~~~~p~~~~~  227 (303)
T PF08449_consen  151 SSALGIILLLLSLLLDAFTGVYQEKLFKKY-GKSPWELMFYTNLFSLPFLLILLFLL--PTGEFRSAIRFISAHPSVLLY  227 (303)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHH--HhhHhhHHHHHHHHhHHHHHH
Confidence            122399999999999999999999999987 56667777777788877766554430  0221  11122233332222 


Q ss_pred             --HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCCCcCC
Q 015676          280 --LLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVK  353 (403)
Q Consensus       280 --~~il~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~~k~~  353 (403)
                        +..+.++++...+...+|..++...+..++++.+++.++|+++||+++++.+++|+++|+.|+.+|+.+++|++
T Consensus       228 l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  228 LLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence              22345677777888889999999999999999999999999999999999999999999999999998776653

; GO: 0055085 transmembrane transport

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.91  E-value=4.8e-22  Score=195.82  Aligned_cols=232  Identities=15%  Similarity=0.177  Sum_probs=182.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Q 015676          115 RNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPE  194 (403)
Q Consensus       115 r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~  194 (403)
                      +..++|.+.|+++...|.+...|++|++.+.+|++.++.+++++++++++||+|+++.||+|+++.++|+.++...+...
T Consensus        77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~  156 (334)
T PF06027_consen   77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLS  156 (334)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccc
Confidence            45678999999999999999999999999999999999999999999999999999999999999999999887765433


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCC
Q 015676          195 GTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGH  274 (403)
Q Consensus       195 ~~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~  274 (403)
                      +++..+.+....|++++++++++.|++.|+.|+..|+.   +......+++++|.+++.+.+.+   .|..+-.. + .|
T Consensus       157 ~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~---~~~~~lg~~Glfg~ii~~iq~~i---le~~~i~~-~-~w  228 (334)
T PF06027_consen  157 GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA---PRVEFLGMLGLFGFIISGIQLAI---LERSGIES-I-HW  228 (334)
T ss_pred             cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC---CHHHHHHHHHHHHHHHHHHHHHh---eehhhhhc-c-CC
Confidence            22222233456799999999999999999999999874   45555677888888887765442   33322111 1 23


Q ss_pred             hhHHHHHHH----HHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCCC
Q 015676          275 SKATMLLIC----NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS  350 (403)
Q Consensus       275 ~~~~~~~il----~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~~  350 (403)
                      ++..+...+    .....-.++..++++.++..-+.....+.+++.++++++||+++++..++|.++|++|..+|+..++
T Consensus       229 ~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  229 TSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            443332221    1122334566788899988878887788999999999999999999999999999999999987555


Q ss_pred             cCCC
Q 015676          351 KVKD  354 (403)
Q Consensus       351 k~~~  354 (403)
                      +.++
T Consensus       309 ~~~~  312 (334)
T PF06027_consen  309 PEEE  312 (334)
T ss_pred             cccc
Confidence            4444

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.89  E-value=4.5e-21  Score=181.68  Aligned_cols=305  Identities=15%  Similarity=0.158  Sum_probs=239.3

Q ss_pred             CCcccchhHHHHHHHHHHHHHHHHhhhhhhhh-cc-c---cCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 015676           28 HRHQVSSKTRFLNVALVVGDCILVGLQPILVF-TT-K---VDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEK  102 (403)
Q Consensus        28 ~~~~~~~k~~~l~~l~~~~~~~~~~~~~il~~-~s-~---~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~  102 (403)
                      |..+...+.....++|+.+....|..++++++ .. +   +|+++.=++.-.+|.+.++.++++..++...+.. ..+..
T Consensus         3 ~~~~~~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~-~~~~a   81 (327)
T KOG1581|consen    3 VNSGGMANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE-LSGVA   81 (327)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccccc-CCCCC
Confidence            44444556677788899999999999998884 22 2   1333222344668999999999997776544332 21222


Q ss_pred             cchhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 015676          103 SLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLI  182 (403)
Q Consensus       103 ~~~~~~~~~~~~r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~  182 (403)
                      |             .+.+...|+...+...++|.|++|++.+|..+.+++|.+.++++..++.|+|++.+++++.++...
T Consensus        82 p-------------l~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~  148 (327)
T KOG1581|consen   82 P-------------LYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISL  148 (327)
T ss_pred             c-------------hhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHh
Confidence            2             346788899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 015676          183 GISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMF  262 (403)
Q Consensus       183 Gv~lv~~~~~~~~~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~  262 (403)
                      |+.++.+.+..++....+.+...+|+.++...-++.|+.+..++++.|+. +.+.+.+...+.+|+.+.+...++    .
T Consensus       149 GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-k~s~~~mM~~vNLf~~i~~~~~li----~  223 (327)
T KOG1581|consen  149 GVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY-KVSSLHMMFGVNLFSAILNGTYLI----L  223 (327)
T ss_pred             heeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC-CccHhHHHHHHHHHHHHHHHHhhh----c
Confidence            99998776543333344556678899999999999999999999999975 788898899999999999887744    2


Q ss_pred             cCC--CccccccCChhHHHHH---HHHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHH
Q 015676          263 KGP--SSFDILQGHSKATMLL---ICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISI  337 (403)
Q Consensus       263 ~g~--~~~~~~~g~~~~~~~~---il~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~l  337 (403)
                      +|.  +...|...++...|-+   -...++|+.++.+.+...++++-...++.+-++++++|.++||++++..+++|..+
T Consensus       224 qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~i  303 (327)
T KOG1581|consen  224 QGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLI  303 (327)
T ss_pred             CCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeee
Confidence            332  1223444444433332   34578899999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCc
Q 015676          338 VFISMHQFFSPLSK  351 (403)
Q Consensus       338 Vi~gv~ly~~~~~k  351 (403)
                      |+.|+++=...+.|
T Consensus       304 VFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  304 VFGGIFLEILLKKK  317 (327)
T ss_pred             ehHHHHHHHHHHHh
Confidence            99998865544344

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.88  E-value=1.8e-19  Score=180.33  Aligned_cols=277  Identities=13%  Similarity=0.098  Sum_probs=180.1

Q ss_pred             HhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHHHHHHHHHHHH
Q 015676           51 VGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAIN  130 (403)
Q Consensus        51 ~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~vpAlly~l~  130 (403)
                      |+.+-++.|.+-++|   .++...++.+-.+-.++.+.+.+..+++..   .+..+       +|+...+++.+++.+++
T Consensus        25 ~~~~~~~~k~a~~~G---~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~---~~~~~-------~~~~~~l~l~g~~g~~~   91 (358)
T PLN00411         25 VVGISTLFKVATSKG---LNIYPFLGYSYLLASLLLLPSLFFTNRSRS---LPPLS-------VSILSKIGLLGFLGSMY   91 (358)
T ss_pred             HHHHHHHHHHHHHCC---CCccHHHHHHHHHHHHHHHHHHHHHHHhcc---cCcch-------HHHHHHHHHHHHHHHHH
Confidence            444445556554444   445556677766654444443333222111   11101       22333566677766677


Q ss_pred             HHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHH------hcCCCCHHHHHHHHHHHHHHHHhhcCCCCCC---------
Q 015676          131 NYLKFIMQLYFNPATVKMLSNLKVFVIALLLKII------MKRRFSIIQWEALALLLIGISVNQLRSLPEG---------  195 (403)
Q Consensus       131 n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~------L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~---------  195 (403)
                      +.+.|+++++++++...++.++.|++|+++++++      +|||++++||+++++.++|++++...+.+..         
T Consensus        92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~  171 (358)
T PLN00411         92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYL  171 (358)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccc
Confidence            8899999999999999999999999999999999      6999999999999999999998754321100         


Q ss_pred             -----C--CCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHH-HHHHHHHHHHHHHHhhcCCCc
Q 015676          196 -----T--SALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYG-YGAIFNFLGIVITAMFKGPSS  267 (403)
Q Consensus       196 -----~--~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~-~g~i~~~~~~l~~~~~~g~~~  267 (403)
                           .  ...+......|.++.++++++++++.+..++..+++  ++....+.+... .+..+..+.+    ..++...
T Consensus       172 ~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~--~~~~~~t~~~~~~~~~~~~~~~l----~~~~~~~  245 (358)
T PLN00411        172 NFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY--PAAFTVSFLYTVCVSIVTSMIGL----VVEKNNP  245 (358)
T ss_pred             cccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CcHhHHHHHHHHHHHHHHHHHHH----HHccCCc
Confidence                 0  000111124588999999999999999999988775  233222322222 2222222222    2332211


Q ss_pred             cccccCChhHHHHHHHHHHHHHH----HHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHH
Q 015676          268 FDILQGHSKATMLLICNNAAQGI----LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMH  343 (403)
Q Consensus       268 ~~~~~g~~~~~~~~il~~a~gg~----~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~  343 (403)
                      ......++...+ .+++.++...    +-.+.+|+.++...+....+.|+++.+++++++||++++.+++|+++|+.|++
T Consensus       246 ~~~~~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~  324 (358)
T PLN00411        246 SVWIIHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFY  324 (358)
T ss_pred             ccceeccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            111223333332 3444444322    22235677888888899999999999999999999999999999999999999


Q ss_pred             HhcC
Q 015676          344 QFFS  347 (403)
Q Consensus       344 ly~~  347 (403)
                      +...
T Consensus       325 l~~~  328 (358)
T PLN00411        325 AVMW  328 (358)
T ss_pred             HHHh
Confidence            9875

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.86  E-value=8.4e-19  Score=175.38  Aligned_cols=299  Identities=12%  Similarity=0.121  Sum_probs=198.7

Q ss_pred             cccccccCCcccchhHHHHHHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 015676           21 VSRAYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVG  100 (403)
Q Consensus        21 ~~~~~~~~~~~~~~k~~~l~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~  100 (403)
                      ..+.+++.-..++.|-..++..+...+...    -+..|+.-++  ++| |.++..++-++..+++.++.. .+.+.. +
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~wy~~s~~~----~~~nK~vl~~--~~~-P~~l~~~~~~~~~l~~~~~~~-~~~~~~-~  105 (350)
T PTZ00343         35 IYHSLFESFPNFKWKLALLFLTWYALNVLY----VVDNKLALNM--LPL-PWTISSLQLFVGWLFALLYWA-TGFRKI-P  105 (350)
T ss_pred             cccchhhccCcccHHHHHHHHHHHHHHHHH----HHHHHHHHHh--CCh-hHHHHHHHHHHHHHHHHHHHH-hCCCCC-C
Confidence            333444444445666666666655555422    1223322222  223 778888888888666554422 111110 0


Q ss_pred             cccchhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 015676          101 EKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL  180 (403)
Q Consensus       101 ~~~~~~~~~~~~~~r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll  180 (403)
                      ..+  +.+.      ........++++...+...++++++.+++.+++++.+.|++|++++++++|||+++++|+++++.
T Consensus       106 ~~~--~~~~------~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~  177 (350)
T PTZ00343        106 RIK--SLKL------FLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPI  177 (350)
T ss_pred             CCC--CHHH------HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence            000  0111      12356778888887788888999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCC--CchhHHHHHH--HHHHHHHHHHHH
Q 015676          181 LIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYD--TSIYHQNLFL--YGYGAIFNFLGI  256 (403)
Q Consensus       181 ~~Gv~lv~~~~~~~~~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~--~s~~~~n~~l--~~~g~i~~~~~~  256 (403)
                      ++|+.+....+         ...+..|+++++++++++++.+++.|+.+++...  .+....+.+.  ..+|.++.+|..
T Consensus       178 v~Gv~l~~~~~---------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~  248 (350)
T PTZ00343        178 VGGVALASVKE---------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLV  248 (350)
T ss_pred             HHHHHheeccc---------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999975421         1234569999999999999999999999876411  1222233333  446666666654


Q ss_pred             HHHHhhcCCCccc-------cccCChh-HHHHHHHHHHHHHHHHH----HHHHHhhhhHHHHHhhHHHHHHHHHHHHHhC
Q 015676          257 VITAMFKGPSSFD-------ILQGHSK-ATMLLICNNAAQGILSS----FFFKYADTILKKYSSTVATIFTGLASAALFG  324 (403)
Q Consensus       257 l~~~~~~g~~~~~-------~~~g~~~-~~~~~il~~a~gg~~vs----~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfg  324 (403)
                      +.   .++.....       .+..+.+ ..+..++..++...+..    +.+++.++++.+.+..+.+++++++|+++||
T Consensus       249 ~~---~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~g  325 (350)
T PTZ00343        249 LF---FEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQ  325 (350)
T ss_pred             HH---HhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhC
Confidence            32   22211000       0111211 11222223333333322    4678899999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHhcCC
Q 015676          325 HTLTMNFILGISIVFISMHQFFSP  348 (403)
Q Consensus       325 e~lt~~~~lG~~lVi~gv~ly~~~  348 (403)
                      |++|..+++|.++++.|+++|+..
T Consensus       326 e~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        326 TQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             CCCchHhHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999864

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.85  E-value=3.8e-19  Score=166.47  Aligned_cols=289  Identities=17%  Similarity=0.165  Sum_probs=198.1

Q ss_pred             hhhhccc---cCC----cccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccc-cchhHHHHHHhhhhhhHHHHHHHHH
Q 015676           56 ILVFTTK---VDG----GFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEK-SLLSFSTIAQAARNNVLLAVPAFLY  127 (403)
Q Consensus        56 il~~~s~---~~g----~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~vpAlly  127 (403)
                      ++.||+.   .+|    ..++-.+...|+.|+..+.+-..+-.+.+++....+. ...+..   ...-+.+.+..||+|.
T Consensus        20 l~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~---~~pf~p~lfl~Pal~D   96 (372)
T KOG3912|consen   20 LVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQD---SSPFNPVLFLPPALCD   96 (372)
T ss_pred             HHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccc---cCCCCcceecChHHHH
Confidence            4567765   232    2456667778999998887655444333322111100 000000   0011234567799999


Q ss_pred             HHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCCChhhH
Q 015676          128 AINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSA-LGLPVATG  206 (403)
Q Consensus       128 ~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~-~~~~~~~~  206 (403)
                      .....++|+++.+.+++.||+++...++||++|+..+|||+++.+||+++....+|++++...+....+.. ......+.
T Consensus        97 i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iit  176 (372)
T KOG3912|consen   97 IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIIT  176 (372)
T ss_pred             HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchh
Confidence            99999999999999999999999999999999999999999999999999999999999876543211111 11223456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHH-HHHHHHHHHHHHhhcCCC----ccccccCChhHHHH-
Q 015676          207 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYG-AIFNFLGIVITAMFKGPS----SFDILQGHSKATML-  280 (403)
Q Consensus       207 G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g-~i~~~~~~l~~~~~~g~~----~~~~~~g~~~~~~~-  280 (403)
                      |+++++.+.++-|..-|+.||.+|++ +.++..-.-+-..|| ++++++.+....+..|.+    ..+.++.|... |. 
T Consensus       177 GdllIiiaqiivaiQ~v~Eek~l~~~-nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~-~~~  254 (372)
T KOG3912|consen  177 GDLLIIIAQIIVAIQMVCEEKQLKKS-NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDA-FAA  254 (372)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhhc-cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHH-HHH
Confidence            99999999999999999999999987 344433333446777 444444443333333311    11222222210 10 


Q ss_pred             ----HHHHHHHHHHHHH---------HHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcC
Q 015676          281 ----LICNNAAQGILSS---------FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       281 ----~il~~a~gg~~vs---------~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                          ..+..+.+|..++         .+.|+.++.++....++++.+.+++++.+++|.+...++.|.++.+.|+.+|+.
T Consensus       255 ~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  255 LQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             hcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                0122233333333         567999999999999999999999999999999999999999999999999986


Q ss_pred             CC
Q 015676          348 PL  349 (403)
Q Consensus       348 ~~  349 (403)
                      -.
T Consensus       335 il  336 (372)
T KOG3912|consen  335 IL  336 (372)
T ss_pred             HH
Confidence            43

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.85  E-value=1.5e-18  Score=169.74  Aligned_cols=219  Identities=12%  Similarity=0.149  Sum_probs=161.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 015676          118 VLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS  197 (403)
Q Consensus       118 ~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~  197 (403)
                      ....+.++++++++.+.+++++++++++++++.++.|+++++++++++|||+++++|.++++.++|+++....+      
T Consensus        66 ~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~------  139 (302)
T TIGR00817        66 KLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE------  139 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc------
Confidence            35677788888999999999999999999999999999999999999999999999999999999998753211      


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--ccccc---
Q 015676          198 ALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS--FDILQ---  272 (403)
Q Consensus       198 ~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~--~~~~~---  272 (403)
                         .+.+..|+++++++++++++..++.|+..+++ +.+.+..+.+....+.++.+|....   .++...  .+...   
T Consensus       140 ---~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~-~~~~~~~~~~~~~~~~~~l~p~~~~---~~~~~~~~~~~~~~~~  212 (302)
T TIGR00817       140 ---LSFNWAGFLSAMISNITFVSRNIFSKKAMTIK-SLDKTNLYAYISIMSLFLLSPPAFI---TEGPPFLPHGFMQAIS  212 (302)
T ss_pred             ---ccccHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCcccHHHHHHHHHHHHHHHHHHH---HcchHHHHHHHHHhhc
Confidence               11234699999999999999999999988732 2333444445455565555554332   232110  00000   


Q ss_pred             CChh-HHHHHHHHHHHHH-----HHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhc
Q 015676          273 GHSK-ATMLLICNNAAQG-----ILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  346 (403)
Q Consensus       273 g~~~-~~~~~il~~a~gg-----~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~  346 (403)
                      ..+. ..+..++..+.+.     ......+|+.++.+.+....+.+++++++|++++||++|..+++|+++++.|+++|+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~  292 (302)
T TIGR00817       213 GVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS  292 (302)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence            0111 1222122222111     122246788999999999999999999999999999999999999999999999998


Q ss_pred             CCC
Q 015676          347 SPL  349 (403)
Q Consensus       347 ~~~  349 (403)
                      ..+
T Consensus       293 ~~k  295 (302)
T TIGR00817       293 RVK  295 (302)
T ss_pred             HHh
Confidence            743

specificities overlap.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.84  E-value=3.5e-18  Score=166.98  Aligned_cols=277  Identities=14%  Similarity=0.176  Sum_probs=185.0

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHh
Q 015676           34 SKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQA  113 (403)
Q Consensus        34 ~k~~~l~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~  113 (403)
                      +|......+++...++.++..++..|.. .    +++|..+++.+-++..++...++..+++..     .   .+...+.
T Consensus         3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~----~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~-----~---~~~~~~~   69 (296)
T PRK15430          3 AKQTRQGVLLALAAYFIWGIAPAYFKLI-Y----YVPADEILTHRVIWSFFFMVVLMSICRQWS-----Y---LKTLIQT   69 (296)
T ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHh-c----CCCHHHHHHHHHHHHHHHHHHHHHHHccHH-----H---HHHHHcC
Confidence            3444556677778888899998888854 2    277888999998887654444333222110     0   0000011


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCC
Q 015676          114 ARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLP  193 (403)
Q Consensus       114 ~r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~  193 (403)
                      .|+.......++++++++.+.|+|++++++++..++.++.|+++++++++++|||++++||.++++.++|+.++..+.  
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~--  147 (296)
T PRK15430         70 PQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTF--  147 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHc--
Confidence            222223345567788999999999999999999999999999999999999999999999999999999999875321  


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccC
Q 015676          194 EGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQG  273 (403)
Q Consensus       194 ~~~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g  273 (403)
                       ++    .      .+++++++++++++.++.|+..++. .......+.+...++.+.    .+.  ..+...  .....
T Consensus       148 -~~----~------~~~~l~aa~~~a~~~i~~r~~~~~~-~~~~~~~~~~~~~~~~~~----~~~--~~~~~~--~~~~~  207 (296)
T PRK15430        148 -GS----L------PIIALGLAFSFAFYGLVRKKIAVEA-QTGMLIETMWLLPVAAIY----LFA--IADSST--SHMGQ  207 (296)
T ss_pred             -CC----c------cHHHHHHHHHHHHHHHHHHhcCCCC-chhHHHHHHHHHHHHHHH----HHH--HccCCc--ccccC
Confidence             11    1      1346778899999998888864321 112223333332222221    110  011110  00111


Q ss_pred             ChhHHHHHHH----HHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 015676          274 HSKATMLLIC----NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  345 (403)
Q Consensus       274 ~~~~~~~~il----~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly  345 (403)
                      .++..|..++    ..+++..+....+|+.++...+...++.++++.+++++++||+++..+++|+++|+.|+.+.
T Consensus       208 ~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~  283 (296)
T PRK15430        208 NPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF  283 (296)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            1111122222    33355566667789999999999999999999999999999999999999999997765433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.83  E-value=2e-17  Score=161.36  Aligned_cols=276  Identities=12%  Similarity=0.123  Sum_probs=192.7

Q ss_pred             hhHHHHHHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHh
Q 015676           34 SKTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQA  113 (403)
Q Consensus        34 ~k~~~l~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~  113 (403)
                      .||..-.++.+....+.+++..+..|...++    .+|..+++++-+.-.++-+.+...++++ .    +  +++.+   
T Consensus         3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~----~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~----~--~~~~~---   68 (292)
T PRK11272          3 FRQLLPLFGALFALYIIWGSTYLVIRIGVES----WPPLMMAGVRFLIAGILLLAFLLLRGHP-L----P--TLRQW---   68 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHHHHHHhCCC-C----C--cHHHH---
Confidence            4677777778888888999998888865443    6788888888887765544444332211 0    1  11111   


Q ss_pred             hhhhhHHHHHHHH-HHHHHHHHHHHH-hccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015676          114 ARNNVLLAVPAFL-YAINNYLKFIMQ-LYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  191 (403)
Q Consensus       114 ~r~~~~~~vpAll-y~l~n~L~f~al-~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~  191 (403)
                          ....+.+.+ .+.++.+.+++. ++.+++...++.++.|+++++++++ +|||++++||.++++.++|+.++..++
T Consensus        69 ----~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~  143 (292)
T PRK11272         69 ----LNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGG  143 (292)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCc
Confidence                123444544 457788889998 9999999999999999999999985 799999999999999999999875432


Q ss_pred             CCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 015676          192 LPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDIL  271 (403)
Q Consensus       192 ~~~~~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~  271 (403)
                      ..        +....|.++.+++++++|+++++.|+..+.   .+......++.+ +.+...+...    ..+..   ..
T Consensus       144 ~~--------~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~----~~~~~---~~  204 (292)
T PRK11272        144 NL--------SGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAEMLA-AGVVLLIASL----LSGER---LT  204 (292)
T ss_pred             cc--------ccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHHHHH-HHHHHHHHHH----HcCCc---cc
Confidence            11        122358899999999999999999886433   233333334333 3222222211    22211   11


Q ss_pred             cCChhHHHHHHHHHHHHHHHHH-----HHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhc
Q 015676          272 QGHSKATMLLICNNAAQGILSS-----FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  346 (403)
Q Consensus       272 ~g~~~~~~~~il~~a~gg~~vs-----~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~  346 (403)
                      ...+...|..+++.++.+..++     +.+|+.++...+....++|+++.+++++++||++|..+++|.++++.|+++.+
T Consensus       205 ~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~  284 (292)
T PRK11272        205 ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT  284 (292)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence            1123445555555555554433     44577787788888889999999999999999999999999999999998876


Q ss_pred             C
Q 015676          347 S  347 (403)
Q Consensus       347 ~  347 (403)
                      .
T Consensus       285 ~  285 (292)
T PRK11272        285 L  285 (292)
T ss_pred             H
Confidence            5

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.83  E-value=1.9e-17  Score=161.96  Aligned_cols=274  Identities=17%  Similarity=0.147  Sum_probs=182.3

Q ss_pred             HHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHHHH
Q 015676           43 LVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAV  122 (403)
Q Consensus        43 ~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~v  122 (403)
                      +....++.+++..+.+|..-++    .+|...++++-.+-.++.+.+ . .++ +    .+   ++          ....
T Consensus         8 ~~l~~~~~Wg~~~~~~k~~~~~----~~p~~~~~~R~~~a~~~l~~~-~-~~~-~----~~---~~----------~~~~   63 (299)
T PRK11453          8 LALLVVVVWGLNFVVIKVGLHN----MPPLMLAGLRFMLVAFPAIFF-V-ARP-K----VP---LN----------LLLG   63 (299)
T ss_pred             HHHHHHHHHhhhHHHHHHHHhc----CCHHHHHHHHHHHHHHHHHHH-h-cCC-C----Cc---hH----------HHHH
Confidence            3555677888888888754332    678888888866543222211 1 111 1    11   11          1111


Q ss_pred             HHH-HHHHHHHHHHHHHhc-cChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 015676          123 PAF-LYAINNYLKFIMQLY-FNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALG  200 (403)
Q Consensus       123 pAl-ly~l~n~L~f~al~~-l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~~  200 (403)
                      -++ .+..+..+.|.++++ .+++...++.++.|+++++++++++|||++++||+++++.++|+.++..++..      +
T Consensus        64 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~------~  137 (299)
T PRK11453         64 YGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLN------G  137 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCC------C
Confidence            133 234555677889887 78899999999999999999999999999999999999999999987543211      1


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHH-HHHHHHHHhhcCCCcc-ccccCChhHH
Q 015676          201 LPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFN-FLGIVITAMFKGPSSF-DILQGHSKAT  278 (403)
Q Consensus       201 ~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~-~~~~l~~~~~~g~~~~-~~~~g~~~~~  278 (403)
                      .+.+..|+++.++++++++.+.++.++..++.  .++......  .+...+. .+........+++... ..+..++...
T Consensus       138 ~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (299)
T PRK11453        138 QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHS--TRPAVMSLV--VWSALIPIIPFFVASLILDGSATMIHSLVTIDMTT  213 (299)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhccc--CccchhHHH--HHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHH
Confidence            11234599999999999999999999976553  222111111  1111111 1222122223332110 1123445566


Q ss_pred             HHHHHHHHHHHHHHHHHH-----HHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCCC
Q 015676          279 MLLICNNAAQGILSSFFF-----KYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS  350 (403)
Q Consensus       279 ~~~il~~a~gg~~vs~v~-----Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~~  350 (403)
                      |..+++.++.+..+++..     |+.++...+....+.|+++.+++++++||+++..+++|+++|+.|+++-..+..
T Consensus       214 ~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        214 ILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            777777777776666554     556777777888899999999999999999999999999999999988765443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.82  E-value=2e-19  Score=164.63  Aligned_cols=284  Identities=14%  Similarity=0.147  Sum_probs=209.8

Q ss_pred             HHHHHHHHHHhhhhhhhh-cccc----CC----cccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHH
Q 015676           42 ALVVGDCILVGLQPILVF-TTKV----DG----GFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQ  112 (403)
Q Consensus        42 l~~~~~~~~~~~~~il~~-~s~~----~g----~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~  112 (403)
                      +|.++..++|-..+|.++ ..+.    +|    ++.|. .+.||+++...-+++-+++..+.+.+.  ++.         
T Consensus        16 ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfa-laLVf~qC~~N~vfAkvl~~ir~~~~~--D~t---------   83 (337)
T KOG1580|consen   16 ICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFA-LALVFFQCTANTVFAKVLFLIRKKTEI--DNT---------   83 (337)
T ss_pred             EEecchhheehhhhhHHHHhhccccCCCCcchheehHH-HHHHHHHHHHHHHHHHhheeecccccc--cCC---------
Confidence            466667777777777763 3331    12    23443 377999999999888665433222111  111         


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCC
Q 015676          113 AARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSL  192 (403)
Q Consensus       113 ~~r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~  192 (403)
                         ..+.|+-.++-|.+...-...|++++|.+|..+-+++||+.++++.+++.+++++++++.+++++.+||+++.+.+.
T Consensus        84 ---~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~  160 (337)
T KOG1580|consen   84 ---PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN  160 (337)
T ss_pred             ---cchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc
Confidence               13468888999999999999999999999999999999999999999999999999999999999999999988754


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--ccc
Q 015676          193 PEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS--FDI  270 (403)
Q Consensus       193 ~~~~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~--~~~  270 (403)
                      ..+...  ......|-++.+++-.+.|+.++.+|++.+.+ .++-..++..+.+|+.+....+++    +.|+..  ..|
T Consensus       161 Kv~g~e--~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-q~~g~~MM~~~NlwStL~Lg~g~l----fTGElweF~yF  233 (337)
T KOG1580|consen  161 KVGGAE--DKTFGFGELLLILSLAMDGLTGSIQDRIRASY-QRTGTSMMFYTNLWSTLYLGAGLL----FTGELWEFFYF  233 (337)
T ss_pred             ccCCCc--ccccchHHHHHHHHHHhcccchhHHHHHHHhh-ccCchhhHHHHHHHHHHHhhhhhe----ehhhHHHHHHH
Confidence            222110  01123478889999999999999999998776 233333445566788877665554    445421  112


Q ss_pred             ccCChhHHHH---HHHHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcC
Q 015676          271 LQGHSKATML---LICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       271 ~~g~~~~~~~---~il~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                      -+.++...|-   +.+...+|+.++...+-+.++.+++..++.+..++++.|+++|+++++..+|+|..+|+.+...-..
T Consensus       234 ~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  234 VQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            2344433332   2345678999999999999999999999999999999999999999999999999999999765433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.79  E-value=1.5e-16  Score=151.62  Aligned_cols=205  Identities=15%  Similarity=0.111  Sum_probs=151.8

Q ss_pred             HHHHH-HHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 015676          120 LAVPA-FLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSA  198 (403)
Q Consensus       120 ~~vpA-lly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~  198 (403)
                      +.+.+ +...+++.+.|+|++++++++..++.++.|+++++++.+++|||++++||+++.+.++|+.++..++.  .   
T Consensus        49 ~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~--~---  123 (260)
T TIGR00950        49 LLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN--L---  123 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--c---
Confidence            34444 45679999999999999999999999999999999999999999999999999999999998754331  1   


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHH
Q 015676          199 LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKAT  278 (403)
Q Consensus       199 ~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~  278 (403)
                         +....|+++.++++++++...++.++..++. +.+....+.+....+.++..+...    ..++..     ..+...
T Consensus       124 ---~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~-----~~~~~~  190 (260)
T TIGR00950       124 ---SINPAGLLLGLGSGISFALGTVLYKRLVKKE-GPELLQFTGWVLLLGALLLLPFAW----FLGPNP-----QALSLQ  190 (260)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHHHHHhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHH----hcCCCC-----CcchHH
Confidence               1234588999999999999999999987654 222222232333344443333322    222211     112333


Q ss_pred             HHHHHHH-----HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 015676          279 MLLICNN-----AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISM  342 (403)
Q Consensus       279 ~~~il~~-----a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv  342 (403)
                      |..++..     .++..+....+|+.+....+...++.++++.+++++++||+++...++|..+++.|+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       191 WGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            3333333     334444556678888888899999999999999999999999999999999999885

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.75  E-value=4.9e-15  Score=144.65  Aligned_cols=264  Identities=12%  Similarity=-0.010  Sum_probs=174.6

Q ss_pred             HHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHH
Q 015676           41 VALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL  120 (403)
Q Consensus        41 ~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  120 (403)
                      +.++...++.++....+.|+.-++    +++...++.+-++-.++.+.+. +..+..    .   +++       +....
T Consensus        14 ~~~~~la~~~~~~~~~~~K~~~~~----~~~~~~~~~R~~~a~l~l~~~~-~~~~~~----~---~~~-------~~~~~   74 (293)
T PRK10532         14 ILLLLIAMASIQSGASLAKSLFPL----VGAPGVTALRLALGTLILIAIF-KPWRLR----F---AKE-------QRLPL   74 (293)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHHH-hHHhcc----C---CHH-------HHHHH
Confidence            355555666777777777755432    6777888888777755544332 111110    0   011       11233


Q ss_pred             HHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 015676          121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALG  200 (403)
Q Consensus       121 ~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~~  200 (403)
                      ...++++...+.+.|++++++|++...++..+.|+++++++.    ||.++.+|  +.+.++|+.++..++.+.+    +
T Consensus        75 ~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~~~--~~i~~~Gv~li~~~~~~~~----~  144 (293)
T PRK10532         75 LFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDFVW--VVLAVLGLWFLLPLGQDVS----H  144 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHHHH--HHHHHHHHheeeecCCCcc----c
Confidence            455667788889999999999999999999999999998873    55555555  5567899887643321111    1


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHH
Q 015676          201 LPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATML  280 (403)
Q Consensus       201 ~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~~  280 (403)
                        ....|.++.+++++++++..++.+|..++.   +......+. +++.++..+...    ..+..     ..+++..|.
T Consensus       145 --~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~---~~~~~~~~~-~~~~~~l~~~~~----~~~~~-----~~~~~~~~~  209 (293)
T PRK10532        145 --VDLTGAALALGAGACWAIYILSGQRAGAEH---GPATVAIGS-LIAALIFVPIGA----LQAGE-----ALWHWSILP  209 (293)
T ss_pred             --CChHHHHHHHHHHHHHHHHHHHHHHHhccC---CchHHHHHH-HHHHHHHHHHHH----HccCc-----ccCCHHHHH
Confidence              124589999999999999999999987653   233333332 333333333222    22211     112333343


Q ss_pred             HHHHHHHHHH-----HHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCC
Q 015676          281 LICNNAAQGI-----LSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP  348 (403)
Q Consensus       281 ~il~~a~gg~-----~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~  348 (403)
                      ..++.++.+.     +..+.+|+.++...+...+++|+++.+++++++||+++..+++|+++|+.|+..+..+
T Consensus       210 ~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        210 LGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            3334444443     4445668888888999999999999999999999999999999999999999888654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.75  E-value=1.6e-15  Score=148.10  Aligned_cols=270  Identities=12%  Similarity=0.055  Sum_probs=173.5

Q ss_pred             HHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHHHH
Q 015676           43 LVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAV  122 (403)
Q Consensus        43 ~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~v  122 (403)
                      +....++.+++.-+..|..-++    ++|....+++-.+-.++-..+  . .+++.+ .++          .+   ....
T Consensus         8 ~~l~a~~~Wg~~~~~~k~~~~~----~~P~~~~~~R~~~a~l~l~~~--~-~~~~~~-~~~----------~~---~~~~   66 (295)
T PRK11689          8 IGLIAILLWSTMVGLIRGVSES----LGPVGGAAMIYSVSGLLLLLT--V-GFPRLR-QFP----------KR---YLLA   66 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcc----CChHHHHHHHHHHHHHHHHHH--c-cccccc-ccc----------HH---HHHH
Confidence            4555667777776666754333    678777777754443332211  1 111100 000          01   1122


Q ss_pred             HHHHHHHHHHHHHHHHh----ccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCC-CC
Q 015676          123 PAFLYAINNYLKFIMQL----YFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEG-TS  197 (403)
Q Consensus       123 pAlly~l~n~L~f~al~----~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~-~~  197 (403)
                      -++.++.++.+.|.+++    ++++....++.++.|+++++++++++|||++++||.++++.++|+.++..++...+ .+
T Consensus        67 ~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~  146 (295)
T PRK11689         67 GGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAE  146 (295)
T ss_pred             HhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhh
Confidence            34446677777787775    46888889999999999999999999999999999999999999988765432100 00


Q ss_pred             -CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChh
Q 015676          198 -ALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSK  276 (403)
Q Consensus       198 -~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~  276 (403)
                       ..+......|++++++++++++++.++.|+..++.  ++. .  ......+..+ .+...    .+++.    ....++
T Consensus       147 ~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~--~~~-~--~~~~~~~~~l-~~~~~----~~~~~----~~~~~~  212 (295)
T PRK11689        147 LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK--NGI-T--LFFILTALAL-WIKYF----LSPQP----AMVFSL  212 (295)
T ss_pred             hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC--Cch-h--HHHHHHHHHH-HHHHH----HhcCc----cccCCH
Confidence             00111123589999999999999999999986553  222 1  1111122221 11111    22211    122344


Q ss_pred             HHHHHHHHHHH----HHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcC
Q 015676          277 ATMLLICNNAA----QGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       277 ~~~~~il~~a~----gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                      ..|..+++.++    +..+-.+.+|+.++...+...++.|+++.+++++++||+++..+++|+++|+.|+++...
T Consensus       213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            44544444443    222334567888888899999999999999999999999999999999999999876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.72  E-value=2.8e-15  Score=145.42  Aligned_cols=208  Identities=12%  Similarity=0.110  Sum_probs=139.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 015676          121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALG  200 (403)
Q Consensus       121 ~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~~  200 (403)
                      ..-++....++.+.+.++++.|++....+.++.|+++++++++++|||++++||+++++.+.|+.++..++.. .     
T Consensus        67 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~-~-----  140 (281)
T TIGR03340        67 AISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA-Q-----  140 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc-c-----
Confidence            4445567899999999999999999999999999999999999999999999999999999999987654311 1     


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHH-HHHHHHHHhhcCCCccccccCChhHHH
Q 015676          201 LPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFN-FLGIVITAMFKGPSSFDILQGHSKATM  279 (403)
Q Consensus       201 ~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~-~~~~l~~~~~~g~~~~~~~~g~~~~~~  279 (403)
                        ....|..++++++++++++.++.|+..++.   +......+...++.++. .+..... ...++..   .. .+...+
T Consensus       141 --~~~~g~~~~l~aal~~a~~~i~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~-~~~~~~  210 (281)
T TIGR03340       141 --HRRKAYAWALAAALGTAIYSLSDKAAALGV---PAFYSALGYLGIGFLAMGWPFLLLY-LKRHGRS---MF-PYARQI  210 (281)
T ss_pred             --cchhHHHHHHHHHHHHHHhhhhccccccch---hcccccHHHHHHHHHHHHHHHHHHH-HHHhccc---hh-hhHHHH
Confidence              112366778889999999888777654332   11111112222222221 2221111 1111110   00 111112


Q ss_pred             HHHHHHH-----HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 015676          280 LLICNNA-----AQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ  344 (403)
Q Consensus       280 ~~il~~a-----~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~l  344 (403)
                      ..+++.+     ++..+....+++.++...+...+++++++.+++++++||+++..+++|+++|+.|+++
T Consensus       211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            2222222     2333333455666665556666789999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.67  E-value=3.5e-13  Score=129.18  Aligned_cols=210  Identities=18%  Similarity=0.193  Sum_probs=149.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 015676          119 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLK-IIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS  197 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~-~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~  197 (403)
                      ......+.....+.+.|.++++++++..+++.++.|++++++++ +++|||+++++|.++++.++|+.++..++..... 
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~-  150 (292)
T COG0697          72 LLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI-  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh-
Confidence            34555667789999999999999999999999999999999997 7779999999999999999999998766532211 


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHH-HHHHHHHHHHHHHHHHHHHhhcCCCccccccCChh
Q 015676          198 ALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQN-LFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSK  276 (403)
Q Consensus       198 ~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n-~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~  276 (403)
                          . ...|.++.++++++++++.++.|+.. +.  .+....- .++.  +..+    +.........   +  ...+.
T Consensus       151 ----~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~--~~~~----~~~~~~~~~~---~--~~~~~  211 (292)
T COG0697         151 ----L-SLLGLLLALAAALLWALYTALVKRLS-RL--GPVTLALLLQLL--LALL----LLLLFFLSGF---G--APILS  211 (292)
T ss_pred             ----H-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC--ChHHHHHHHHHH--HHHH----HHHHHHhccc---c--ccCCH
Confidence                0 34689999999999999999999987 32  2221111 1111  1111    1111011111   0  11222


Q ss_pred             HHHHHHHHHH-----HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCC
Q 015676          277 ATMLLICNNA-----AQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP  348 (403)
Q Consensus       277 ~~~~~il~~a-----~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~  348 (403)
                      ..|..+...+     ++..+....++..+....+......++++.+++++++||+++..+++|.++++.|+.+.+..
T Consensus       212 ~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         212 RAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            2333333333     33444445566777777777778899999999999999999999999999999999888765

>TIGR00688 rarD rarD protein

Probab=99.58  E-value=1.9e-12  Score=123.70  Aligned_cols=247  Identities=11%  Similarity=0.020  Sum_probs=157.2

Q ss_pred             HHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHH--Hhhhhh
Q 015676           40 NVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIA--QAARNN  117 (403)
Q Consensus        40 ~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~r~~  117 (403)
                      ..+++...++.+++.+++.|.. .+    .+|.++++.+-++-.++-..+....++++.  .     .+++.  +..+..
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~~-~~----~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~--~-----~~~~~~~~~~~~~   70 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKLL-KP----LPATDILGHRMIWSFPFMLLSVTLFRQWAA--L-----IERLKRIQKRPLI   70 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHh-cc----CCHHHHHHHHHHHHHHHHHHHHHHHcchHH--H-----HHHHhCcccchHH
Confidence            3456777888899999998863 22    778899999988875443332222221100  0     00110  000112


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 015676          118 VLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS  197 (403)
Q Consensus       118 ~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~  197 (403)
                      ....+.+++..+++.+.|+|++++++++..++.++.|+++++++++++|||++++||+++++.++|++++..++   ++ 
T Consensus        71 ~~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~---~~-  146 (256)
T TIGR00688        71 LSLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK---GS-  146 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc---CC-
Confidence            24567778889999999999999999999999999999999999999999999999999999999999874321   11 


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhH
Q 015676          198 ALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKA  277 (403)
Q Consensus       198 ~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~  277 (403)
                           ..    .++++++++++++.++.|+..+++   ..  +..   . +.+...+.........+........  +..
T Consensus       147 -----~~----~~~l~aa~~~a~~~i~~~~~~~~~---~~--~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  206 (256)
T TIGR00688       147 -----LP----WEALVLAFSFTAYGLIRKALKNTD---LA--GFC---L-ETLSLMPVAIYYLLQTDFATVQQTN--PFP  206 (256)
T ss_pred             -----ch----HHHHHHHHHHHHHHHHHhhcCCCC---cc--hHH---H-HHHHHHHHHHHHHHHhccCcccccC--chh
Confidence                 11    346778888999888888864321   11  111   1 1111112111111111111000011  111


Q ss_pred             HHHHHHH----HHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHH
Q 015676          278 TMLLICN----NAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAAL  322 (403)
Q Consensus       278 ~~~~il~----~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~l  322 (403)
                      .|..++.    .+++..+....+|+.++-..+...++.|+++.++++++
T Consensus       207 ~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       207 IWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            2322222    34445566677899999999999999999999998764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.52  E-value=2e-14  Score=134.83  Aligned_cols=231  Identities=15%  Similarity=0.158  Sum_probs=160.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc-cChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 015676          119 LLAVPAFLYAINNYLKFIMQLY-FNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTS  197 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~~-l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~  197 (403)
                      .|++.-.++.+.|.+..+|+.+ ++.+...++++..++.+++++++++|||+|.+|+.+++++++|+++..+-+..++..
T Consensus        66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~  145 (330)
T KOG1583|consen   66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS  145 (330)
T ss_pred             hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence            4666667777888888999987 788999999999999999999999999999999999999999999876544322111


Q ss_pred             --------CCCCCh--hhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHH--H-----
Q 015676          198 --------ALGLPV--ATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVIT--A-----  260 (403)
Q Consensus       198 --------~~~~~~--~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~--~-----  260 (403)
                              ....+.  ..+|+.+...+.+.||..|+|+|..+|++.  ..|..++   ++...+++|..+..  .     
T Consensus       146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyG--Kh~~Eal---FytH~LsLP~Flf~~~div~~~  220 (330)
T KOG1583|consen  146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYG--KHWKEAL---FYTHFLSLPLFLFMGDDIVSHW  220 (330)
T ss_pred             hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CChHHHH---HHHHHhccchHHHhcchHHHHH
Confidence                    011112  345777888899999999999999999973  4444444   45677777765431  0     


Q ss_pred             --hhcCCCc-cccccCChhHHHHHHHHHHHHH-HHHHHHHHH---hhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHH
Q 015676          261 --MFKGPSS-FDILQGHSKATMLLICNNAAQG-ILSSFFFKY---ADTILKKYSSTVATIFTGLASAALFGHTLTMNFIL  333 (403)
Q Consensus       261 --~~~g~~~-~~~~~g~~~~~~~~il~~a~gg-~~vs~v~Ky---~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~l  333 (403)
                        .+.++.- ...+...-+..|..++.+-+.+ .++..|+-.   .++.+.+...+++..++.++|+..|.+++|+++++
T Consensus       221 ~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~l  300 (330)
T KOG1583|consen  221 RLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWL  300 (330)
T ss_pred             HHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHH
Confidence              1122210 0001111123343333333333 333333321   23444455556788999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCcCCC
Q 015676          334 GISIVFISMHQFFSPLSKVKD  354 (403)
Q Consensus       334 G~~lVi~gv~ly~~~~~k~~~  354 (403)
                      |+++|+.|+.+|.....++|+
T Consensus       301 Ga~lVF~Gt~~fa~~~~~~~~  321 (330)
T KOG1583|consen  301 GAALVFFGTLLFANVWNHPKA  321 (330)
T ss_pred             HHHHHHHHHHHHHHHHcCccc
Confidence            999999999999887777663

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.46  E-value=1.2e-11  Score=117.82  Aligned_cols=263  Identities=18%  Similarity=0.214  Sum_probs=175.8

Q ss_pred             CCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhccCh
Q 015676           64 DGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNP  143 (403)
Q Consensus        64 ~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~vpAlly~l~n~L~f~al~~l~~  143 (403)
                      ++.++|+ .-++-+.-++|++++.......+++.... +...+|+.   ..|   +++..|+.-++.-.+..++++|++.
T Consensus        39 ~~~f~fP-Lf~ts~h~~v~flfa~~~~~l~~~~~~r~-r~~~sw~~---~Lr---~~aPtalata~DIGLSN~sl~yVtl  110 (349)
T KOG1443|consen   39 TKNFHFP-LFVTSLHLAVKFLFAALSRRLYQCSVPRA-RVVLSWRD---YLR---RLAPTALATALDIGLSNWSLEYVTL  110 (349)
T ss_pred             hcCcCCc-hHHHHHHHHHHHHHHHHHHHHHhccCCcc-ccCCcHHH---HHH---Hhhhhhhhhhcccccccceeeeeee
Confidence            3446663 46677889999998876533332222111 11122322   233   5677788888899999999999999


Q ss_pred             HHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q 015676          144 ATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASV  223 (403)
Q Consensus       144 ~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~~~~~~~~G~ll~Lla~~~sa~a~V  223 (403)
                      +.|++.++..++|+-+|+.+|-=||.++.=..-.++..+|+.+..+++.         +.+..|.++++.+++++|+...
T Consensus       111 SlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT---------qf~i~Gf~lv~~aS~~sGlRW~  181 (349)
T KOG1443|consen  111 SLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST---------QFNIEGFFLVLAASLLSGLRWA  181 (349)
T ss_pred             eeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc---------ceeehhHHHHHHHHHhhhhhHH
Confidence            9999999999999999999998899999988889999999998877643         1345699999999999999999


Q ss_pred             HHHHHhhccC--CCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---cccccCChh-HHHHHHHHHHHHHHHHHHHHH
Q 015676          224 FNEYALKSQY--DTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS---FDILQGHSK-ATMLLICNNAAQGILSSFFFK  297 (403)
Q Consensus       224 y~ekllK~~~--~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~---~~~~~g~~~-~~~~~il~~a~gg~~vs~v~K  297 (403)
                      +.++++++++  ..++.....++.-+-.+   ..+.....+||+..   ...|+..+. ..+..+...+.+|... +.+-
T Consensus       182 ~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~---~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~la-F~l~  257 (349)
T KOG1443|consen  182 FTQMLLRNQPSAKRNPIDTIFHLQPWMSI---GLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLA-FLLE  257 (349)
T ss_pred             HHHHHHhcCccccCCCeeeHHHhhhHHHH---HHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHH-HHHH
Confidence            9999998762  12222222222221111   11222344677631   122222221 2333344445555432 2222


Q ss_pred             H--------hhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcC
Q 015676          298 Y--------ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       298 y--------~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                      .        .+.++-+.+--..-+.+.+++..+.+++++..-++|..+...|+..|..
T Consensus       258 ~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  258 FSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            2        2334444454455578889999999999999999999999999999844

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.43  E-value=3.6e-12  Score=119.44  Aligned_cols=221  Identities=14%  Similarity=0.079  Sum_probs=165.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 015676          119 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSA  198 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~  198 (403)
                      .|.+.|.+-.....|..-++.|++.++..+.+.+|.+.+.+-+.++=|+|+....+.|..++.+|++++.+.+....   
T Consensus       108 tY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s---  184 (367)
T KOG1582|consen  108 TYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS---  184 (367)
T ss_pred             HhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC---
Confidence            46788888888888999999999999999999999999999999999999999999999999999999987654322   


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCC--ccccccCChh
Q 015676          199 LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS--SFDILQGHSK  276 (403)
Q Consensus       199 ~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~--~~~~~~g~~~  276 (403)
                        -+++..|+.++-++-++.|+-|=.+||.+|..+..+     .+|.+++..+.++.++...+..|+-  .+.+...+++
T Consensus       185 --PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss-----~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~  257 (367)
T KOG1582|consen  185 --PNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASS-----SEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPV  257 (367)
T ss_pred             --CCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCc-----ceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcH
Confidence              124567888888888889998989999999874333     3333333333334333322345541  1223344445


Q ss_pred             HHHHHHHHHH----HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCC
Q 015676          277 ATMLLICNNA----AQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL  349 (403)
Q Consensus       277 ~~~~~il~~a----~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~  349 (403)
                      .+....+.-+    +|...+-..+|..++.+....++.+.-+|.++|+++|..|+|....-|..+|+.|+++-..++
T Consensus       258 ~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  258 RTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            4443332222    233344455677888888888889999999999999999999999999999999999866644

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.43  E-value=6.3e-13  Score=129.99  Aligned_cols=224  Identities=15%  Similarity=0.217  Sum_probs=164.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 015676          119 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSA  198 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~  198 (403)
                      .....|+.+++...+.+.++++.+.+.+|+++.+.|++|.++++++.+|++++.-|++++....||.+....+       
T Consensus        85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e-------  157 (316)
T KOG1441|consen   85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE-------  157 (316)
T ss_pred             HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-------
Confidence            4677889999999999999999999999999999999999999999999999999999999999999876532       


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHH--HHhhcCCCccc-cccCCh
Q 015676          199 LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVI--TAMFKGPSSFD-ILQGHS  275 (403)
Q Consensus       199 ~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~--~~~~~g~~~~~-~~~g~~  275 (403)
                        ..++..|+...+.+.+..++..++.+++++++ +.+..  ++++.-+-..+++..++.  ....+|+...+ ....|+
T Consensus       158 --~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~-~~~~~--~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~  232 (316)
T KOG1441|consen  158 --LSFNLFGFISAMISNLAFALRNILSKKLLTSK-GESLN--SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWF  232 (316)
T ss_pred             --ccccHHHHHHHHHHHHHHHHHHHHHHHhhhcc-ccccC--chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccc
Confidence              12567799999999999999999999999743 22332  233333323333322221  01123321100 122344


Q ss_pred             hHHHHHHHHH---HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCCCcC
Q 015676          276 KATMLLICNN---AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV  352 (403)
Q Consensus       276 ~~~~~~il~~---a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~~k~  352 (403)
                      ...+..+++.   -..++....++.+.++++-..+..+..++..+.|+++|++++|+...+|+++-+.|+++|++.+.+.
T Consensus       233 ~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~  312 (316)
T KOG1441|consen  233 VTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKE  312 (316)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhh
Confidence            3333333332   1123455567777888888888888888888999999999999999999999999999999865554


Q ss_pred             CC
Q 015676          353 KD  354 (403)
Q Consensus       353 ~~  354 (403)
                      ++
T Consensus       313 ~~  314 (316)
T KOG1441|consen  313 KK  314 (316)
T ss_pred             hc
Confidence            43

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.38  E-value=7.2e-13  Score=123.95  Aligned_cols=207  Identities=12%  Similarity=0.088  Sum_probs=141.1

Q ss_pred             HHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCC-----CCCCCC
Q 015676          128 AINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGT-----SALGLP  202 (403)
Q Consensus       128 ~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~-----~~~~~~  202 (403)
                      +..-.++|||++|++.+.+.++..+.|.+|++|++.+|||++|+..-++..+.+.||+++..++.--|+     ...+..
T Consensus       108 ~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~  187 (346)
T KOG4510|consen  108 FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVE  187 (346)
T ss_pred             hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccc
Confidence            334489999999999999999999999999999999999999999999999999999998776532111     111211


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHH
Q 015676          203 VATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLI  282 (403)
Q Consensus       203 ~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~~~i  282 (403)
                      ....|.+..+.+++..+--.+..+++-|+- +  ..+...+....+.+.++++...    -|.    +--.+.+..|...
T Consensus       188 ~~~~gt~aai~s~lf~asvyIilR~iGk~~-h--~~msvsyf~~i~lV~s~I~~~~----ig~----~~lP~cgkdr~l~  256 (346)
T KOG4510|consen  188 YDIPGTVAAISSVLFGASVYIILRYIGKNA-H--AIMSVSYFSLITLVVSLIGCAS----IGA----VQLPHCGKDRWLF  256 (346)
T ss_pred             ccCCchHHHHHhHhhhhhHHHHHHHhhccc-c--EEEEehHHHHHHHHHHHHHHhh----ccc----eecCccccceEEE
Confidence            223466666777666665566678877763 1  1122223333444444443321    111    0011122222221


Q ss_pred             ----HHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 015676          283 ----CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  345 (403)
Q Consensus       283 ----l~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly  345 (403)
                          +..-+|++++..-++.-.+-..+.+++..++++.++.+++|||.||++.++|+++|+.++...
T Consensus       257 ~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~  323 (346)
T KOG4510|consen  257 VNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV  323 (346)
T ss_pred             EEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence                233456677777776655555668889999999999999999999999999999999987654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.34  E-value=3.1e-10  Score=109.43  Aligned_cols=225  Identities=13%  Similarity=0.165  Sum_probs=157.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCC
Q 015676          116 NNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEG  195 (403)
Q Consensus       116 ~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~  195 (403)
                      ...++..++++|...-.-.-.+++|++.+++.++++..|+.||+.-..++|+|.+..-|.++++..+|......++.   
T Consensus        76 ~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~---  152 (314)
T KOG1444|consen   76 TAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL---  152 (314)
T ss_pred             HHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc---
Confidence            34478889999988877777899999999999999999999999999999999999999999999999877654432   


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccc--C
Q 015676          196 TSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQ--G  273 (403)
Q Consensus       196 ~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~--g  273 (403)
                            ..+..|+.+.+..+++.+...+|.|+..+.. +.+-|    .+.++--++++|...+.....|+-..-.++  .
T Consensus       153 ------sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~-~l~~~----~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~  221 (314)
T KOG1444|consen  153 ------SFNLRGYSWALANCLTTAAFVVYVKKSVDSA-NLNKF----GLVFYNNLLSLPPLLILSFITGELDALSLNFDN  221 (314)
T ss_pred             ------eecchhHHHHHHHHHHHHHHHHHHHHhhccc-cccce----eEEeehhHHHHHHHHHHHHHhcchHHHHhhccc
Confidence                  1223489999999999999999999988764 22222    222333344444433322233321100011  1


Q ss_pred             C-hhHHHHHHHHHHHHHHHHHHHH----HHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCC
Q 015676          274 H-SKATMLLICNNAAQGILSSFFF----KYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP  348 (403)
Q Consensus       274 ~-~~~~~~~il~~a~gg~~vs~v~----Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~  348 (403)
                      + ....|..+....+.|..+++..    +..++.+-+.........+.+...+++|.+.++.-++|..+-+.|..+|+..
T Consensus       222 ~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~  301 (314)
T KOG1444|consen  222 WSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYA  301 (314)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhh
Confidence            2 2335556666666666666544    3344444444444555677777788889999999999999999999899886


Q ss_pred             CCcCCC
Q 015676          349 LSKVKD  354 (403)
Q Consensus       349 ~~k~~~  354 (403)
                      ..++|+
T Consensus       302 ~~~~k~  307 (314)
T KOG1444|consen  302 TFRKKK  307 (314)
T ss_pred             hhhhcc
Confidence            554444

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.31  E-value=6.6e-09  Score=99.16  Aligned_cols=272  Identities=17%  Similarity=0.201  Sum_probs=165.3

Q ss_pred             HHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHH
Q 015676           41 VALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLL  120 (403)
Q Consensus        41 ~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  120 (403)
                      ++......+.+|..|...|+-+.-     ++..+.--+=+-...+.+.++...++.+        ..+...+..|....+
T Consensus         9 il~~l~Ay~lwG~lp~y~kll~~~-----~~~eIlahRviwS~~~~l~ll~~~r~~~--------~~~~~~~~p~~~~~~   75 (293)
T COG2962           9 ILLALLAYLLWGLLPLYFKLLEPL-----PATEILAHRVIWSFPFMLALLFLLRQWR--------ELKQLLKQPKTLLML   75 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHccC-----CHHHHHHHHHHHHHHHHHHHHHHHhhhH--------HHHHHHhCcHHHHHH
Confidence            445555777888888777755432     2333333333333333333222222110        122233344555567


Q ss_pred             HHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 015676          121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALG  200 (403)
Q Consensus       121 ~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~~  200 (403)
                      .+-+++-+.|=.+.-+|..+=..-..++=+...|++..+++.++||||+++.||+|+++..+||.......   +    +
T Consensus        76 ~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~---g----~  148 (293)
T COG2962          76 ALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL---G----S  148 (293)
T ss_pred             HHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc---C----C
Confidence            77777778888888889988888888999999999999999999999999999999999999998765532   1    2


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccc-CChhHHH
Q 015676          201 LPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQ-GHSKATM  279 (403)
Q Consensus       201 ~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~-g~~~~~~  279 (403)
                      .|  +..    +.-|+..++++. .||.+|-..-.+.-...+.+...+.+    .++  +.-++++   +.. +.+...+
T Consensus       149 lp--wva----l~la~sf~~Ygl-~RK~~~v~a~~g~~lE~l~l~p~al~----yl~--~l~~~~~---~~~~~~~~~~~  212 (293)
T COG2962         149 LP--WVA----LALALSFGLYGL-LRKKLKVDALTGLTLETLLLLPVALI----YLL--FLADSGQ---FLQQNANSLWL  212 (293)
T ss_pred             Cc--HHH----HHHHHHHHHHHH-HHHhcCCchHHhHHHHHHHHhHHHHH----HHH--HHhcCch---hhhcCCchHHH
Confidence            22  211    222455677664 56666643222333333333222211    111  1112211   222 2222223


Q ss_pred             HHHHHHHHHHHH---HHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCC
Q 015676          280 LLICNNAAQGIL---SSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP  348 (403)
Q Consensus       280 ~~il~~a~gg~~---vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~  348 (403)
                      +++....+..+-   -+..-|...=.+-++.++++|.+--+++++++||+++...++..+.+-.|..+|...
T Consensus       213 LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         213 LLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             HHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            333332222222   122234555557889999999999999999999999999999999999999888753

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.27  E-value=3.8e-09  Score=103.19  Aligned_cols=208  Identities=16%  Similarity=0.120  Sum_probs=141.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhccChHHHHHHhh-hHHHHHHHHHHHHhcCCCCHHH----HHHHHHHHHHHHHhhcCCCCCC
Q 015676          121 AVPAFLYAINNYLKFIMQLYFNPATVKMLSN-LKVFVIALLLKIIMKRRFSIIQ----WEALALLLIGISVNQLRSLPEG  195 (403)
Q Consensus       121 ~vpAlly~l~n~L~f~al~~l~~~t~~ll~q-~k~i~tAl~s~~~L~~rls~~q----w~aL~ll~~Gv~lv~~~~~~~~  195 (403)
                      .+.+++....|.++|.+.+++..++...+.+ +.+++..+++.+++|||.++++    ++|+++.++|+.++...+..+.
T Consensus        63 ~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~  142 (290)
T TIGR00776        63 LLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA  142 (290)
T ss_pred             HHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc
Confidence            4455668999999999999999999999999 8899999999999999999999    9999999999988755432111


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhH---HHHHHHHHHHHHHHHHHHHHHhhcCCCcccccc
Q 015676          196 TSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYH---QNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQ  272 (403)
Q Consensus       196 ~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~---~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~  272 (403)
                      + ..+......|.++.++++++.++..+..|+. + +  ++...   +..-+.+.+++++.+.      .+..    .+ 
T Consensus       143 ~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-~-~--~~~~~~~~~~~g~~~~~~~~~~~~------~~~~----~~-  206 (290)
T TIGR00776       143 G-IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-G-V--DGLSVLLPQAIGMVIGGIIFNLGH------ILAK----PL-  206 (290)
T ss_pred             c-cccccchhhHHHHHHHHHHHHHHHHHHHHHc-C-C--CcceehhHHHHHHHHHHHHHHHHH------hccc----ch-
Confidence            0 0000111348999999999999988888865 2 2  22222   2222333333332211      0110    01 


Q ss_pred             CChhHHHHHHHH---HHHHHHHHHHHHH-HhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHH----HHHHHHHHHHHH
Q 015676          273 GHSKATMLLICN---NAAQGILSSFFFK-YADTILKKYSSTVATIFTGLASAALFGHTLTMNFI----LGISIVFISMHQ  344 (403)
Q Consensus       273 g~~~~~~~~il~---~a~gg~~vs~v~K-y~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~----lG~~lVi~gv~l  344 (403)
                       .+...|..++.   .+++..+.....+ +.+.......++..++.+.+.+++++||+.+...+    +|.++++.|+.+
T Consensus       207 -~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l  285 (290)
T TIGR00776       207 -KKYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI  285 (290)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence             12222322221   1222222222234 56666677777889999999999999999999999    999999999876


Q ss_pred             h
Q 015676          345 F  345 (403)
Q Consensus       345 y  345 (403)
                      -
T Consensus       286 ~  286 (290)
T TIGR00776       286 L  286 (290)
T ss_pred             H
Confidence            4

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.25  E-value=5.1e-10  Score=109.53  Aligned_cols=224  Identities=14%  Similarity=0.179  Sum_probs=155.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 015676          120 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSAL  199 (403)
Q Consensus       120 ~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~  199 (403)
                      ...-+.+..+.|.....|+.+.+.+..++++++.=+||-.++.++.+||++..+.+|+++.+.||+++..++..++++..
T Consensus       162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~  241 (416)
T KOG2765|consen  162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLP  241 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCC
Confidence            44556678899999999999999999999999999999999999999999999999999999999999877543322111


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHH---HHHHHHHHHHHHhhcCCCccccccCChh
Q 015676          200 GLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYG---AIFNFLGIVITAMFKGPSSFDILQGHSK  276 (403)
Q Consensus       200 ~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g---~i~~~~~~l~~~~~~g~~~~~~~~g~~~  276 (403)
                      . .....|.++.+++++..|.+.+..++-..++ +...-+ ++++++.|   .++..|.+++-..+ +.+.   |.-.+.
T Consensus       242 a-~~~llG~llaL~sA~~YavY~vllk~~~~~e-g~rvdi-~lffGfvGLfnllllwP~l~iL~~~-~~e~---F~lP~~  314 (416)
T KOG2765|consen  242 A-SRPLLGNLLALLSALLYAVYTVLLKRKIGDE-GERVDI-QLFFGFVGLFNLLLLWPPLIILDFF-GEER---FELPSS  314 (416)
T ss_pred             c-cchhHHHHHHHHHHHHHHHHHHHHHhhcccc-cccccH-HHHHHHHHHHHHHHHhHHHHHHHHh-ccCc---ccCCCC
Confidence            1 1235788999998888887777666644443 112222 23333334   22222332221222 3321   222222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH-----HhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCCC
Q 015676          277 ATMLLICNNAAQGILSSFFFK-----YADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS  350 (403)
Q Consensus       277 ~~~~~il~~a~gg~~vs~v~K-----y~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~~  350 (403)
                      .....++..++.|.+++=.++     ..++.+.+.+.++++.++++...++=|.++|+.+++|...|+.|-+..+.+..
T Consensus       315 ~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  315 TQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             ceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            222333344466666663332     34666777777889999999999999999999999999999999888776543

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.13  E-value=2.9e-11  Score=113.59  Aligned_cols=262  Identities=12%  Similarity=0.154  Sum_probs=187.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--hhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHH
Q 015676           71 PVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSL--LSFSTIAQAARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKM  148 (403)
Q Consensus        71 ~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~l  148 (403)
                      |.-..+.++++-..+|..+-....+....-..|-  ++.+    ..|+.+++.   +.|.+.-....+.++|.+.+-|++
T Consensus        61 plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~----t~r~vlpls---vVfi~mI~fnnlcL~yVgVaFYyv  133 (347)
T KOG1442|consen   61 PLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLA----TARQVLPLS---VVFILMISFNNLCLKYVGVAFYYV  133 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHH----HHHhhcchh---heeeeehhccceehhhcceEEEEe
Confidence            3344577888888888765322211100001110  1122    234433333   334333333344899999999999


Q ss_pred             HhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015676          149 LSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYA  228 (403)
Q Consensus       149 l~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekl  228 (403)
                      =+++..+|+.++++++||+|=+..-..+..+.+.|--+-   .+.|+.   ..+.++.|.+++++++++-|+-++|.+|.
T Consensus       134 gRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lG---vdqE~~---~~~ls~~GvifGVlaSl~vAlnaiytkk~  207 (347)
T KOG1442|consen  134 GRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLG---VDQEGS---TGTLSWIGVIFGVLASLAVALNAIYTKKV  207 (347)
T ss_pred             ccchhhhHHHHhHHhhcccccccccceeehhheehheec---cccccc---cCccchhhhHHHHHHHHHHHHHHHhhhee
Confidence            999999999999999999999988887777777765331   122221   22456679999999999999999999987


Q ss_pred             hhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCC--ccccccCChhHHHHHHHHHHHHHHHHHHHH----HHhhhh
Q 015676          229 LKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPS--SFDILQGHSKATMLLICNNAAQGILSSFFF----KYADTI  302 (403)
Q Consensus       229 lK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~--~~~~~~g~~~~~~~~il~~a~gg~~vs~v~----Ky~~~i  302 (403)
                      +-.- ++.+|.-.+++..++.++.+|.+.+    .|+-  -.++-+-+++..|.++...++.|..+.++.    |..+++
T Consensus       208 l~~v-~~~iw~lt~ynnv~a~lLflpll~l----nge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSpl  282 (347)
T KOG1442|consen  208 LPPV-GDCIWRLTAYNNVNALLLFLPLLIL----NGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPL  282 (347)
T ss_pred             cccc-cCeehhhHHHHHHHHHHHHHHHHHH----cchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccc
Confidence            6554 6789999999999999888877654    2331  123445557788988889999998888774    667888


Q ss_pred             HHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCCC
Q 015676          303 LKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS  350 (403)
Q Consensus       303 ~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~~  350 (403)
                      +.++..+..-..-.++++.+++|..+..-|.|-.+|+.|...|+..++
T Consensus       283 ThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  283 THNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             eeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence            888888888888889999999999999999999999999999987543

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.02  E-value=3.1e-11  Score=112.43  Aligned_cols=212  Identities=14%  Similarity=0.200  Sum_probs=149.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 015676          119 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSA  198 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~  198 (403)
                      .|.+.|+...-.|.+.--|+||.+....+++-.-.++...+++|++||.|+...|+.++++...|++++..++...++..
T Consensus        80 hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~a  159 (336)
T KOG2766|consen   80 HYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRA  159 (336)
T ss_pred             HhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecccccc
Confidence            37888888888898889999999999999999999999999999999999999999999999999998877665444332


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHH
Q 015676          199 LGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKAT  278 (403)
Q Consensus       199 ~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~  278 (403)
                      .|. .+..|+.+++.++.+.|.+++-.|.+.|+-   +.....-++.+||.+++.+-+.    .+....  ---+|++..
T Consensus       160 ggs-np~~GD~lvi~GATlYaVSNv~EEflvkn~---d~~elm~~lgLfGaIIsaIQ~i----~~~~~~--~tl~w~~~i  229 (336)
T KOG2766|consen  160 GGS-NPVKGDFLVIAGATLYAVSNVSEEFLVKNA---DRVELMGFLGLFGAIISAIQFI----FERHHV--STLHWDSAI  229 (336)
T ss_pred             CCC-CCccCcEEEEecceeeeeccccHHHHHhcC---cHHHHHHHHHHHHHHHHHHHHh----hhccce--eeEeehHHH
Confidence            222 234588999999999999999999999874   5555667888899988765532    222110  012333322


Q ss_pred             HHHHHHHHHHHHHHH-------HHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhc
Q 015676          279 MLLICNNAAQGILSS-------FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  346 (403)
Q Consensus       279 ~~~il~~a~gg~~vs-------~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~  346 (403)
                      .   .+.. +.+.+.       .++|-.++..-+...-.+-.++.++  ..||-+.+|...+..+.+..|.++|.
T Consensus       230 ~---~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  230 F---LYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             H---HHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence            1   1111 222222       2333333222222222233344443  57899999999999999999999993

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.94  E-value=3.1e-08  Score=86.72  Aligned_cols=138  Identities=16%  Similarity=0.195  Sum_probs=98.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcc----CCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc----cccc-CC--h
Q 015676          207 AYLYTLIFVTVPSLASVFNEYALKSQ----YDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSF----DILQ-GH--S  275 (403)
Q Consensus       207 G~ll~Lla~~~sa~a~Vy~ekllK~~----~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~----~~~~-g~--~  275 (403)
                      |+++++.++++.++..++.|+.+++.    .+.+.+....++...+.++.++..+.   .|++...    .... ..  +
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~---~e~~~~~~~~~~~~~~~~~~~   77 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFL---LEGPQLSSFFSEIFGEELSSD   77 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHH---HhhhhhhhHHHHhhhhhhcch
Confidence            56788999999999999999999883    24455555555556666665555433   3333210    0111 11  2


Q ss_pred             hHHHHHHHHHHH----HHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcC
Q 015676          276 KATMLLICNNAA----QGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       276 ~~~~~~il~~a~----gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                      ...+..++..++    .......++|+.++++.+....+..+++.++|+++|||++|...++|.++.+.|+++|++
T Consensus        78 ~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   78 PNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            233333333333    334555778999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.81  E-value=1.2e-07  Score=87.05  Aligned_cols=233  Identities=12%  Similarity=0.133  Sum_probs=153.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Q 015676          115 RNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPE  194 (403)
Q Consensus       115 r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~  194 (403)
                      ++..++.+|+++-++.-+-.--+++|++.+.|.+.+++.++.+|..-+.++|.|.+.....+.++..+.-.+..+.+...
T Consensus        66 t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~  145 (309)
T COG5070          66 TKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQA  145 (309)
T ss_pred             hhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhH
Confidence            34446788888776555455557899999999999999999999999999999999999999998888777665544321


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhcCCCccccccC
Q 015676          195 GTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVI-TAMFKGPSSFDILQG  273 (403)
Q Consensus       195 ~~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~-~~~~~g~~~~~~~~g  273 (403)
                      .+...+  .-..|++++...|+.++..-...++..|-...     ......+|.-++++|.++. +..+|+.++.+.-.+
T Consensus       146 ~~~~~~--~lN~GY~Wm~~NclssaafVL~mrkri~ltNf-----~d~dtmfYnNllslPiL~~~s~~~edws~~n~ann  218 (309)
T COG5070         146 SAFKAQ--ILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNF-----KDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANN  218 (309)
T ss_pred             HHHHhc--ccCCceEEEehhhHhHHHHHHHHHHhhccccc-----chhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcC
Confidence            110001  11238888888888877655555555443211     1122234555666666543 334555443334455


Q ss_pred             ChhHHHHHHHHHHHHHHHHHH----HHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCC
Q 015676          274 HSKATMLLICNNAAQGILSSF----FFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL  349 (403)
Q Consensus       274 ~~~~~~~~il~~a~gg~~vs~----v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~  349 (403)
                      ++......++..++....+++    ..+-.++.+-+...++...-.++.+.++||++.+...+..+.+=+.+..+|...+
T Consensus       219 l~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak  298 (309)
T COG5070         219 LSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK  298 (309)
T ss_pred             CChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence            554443333333333333333    3344455555555566667888999999999999999999999999888888766


Q ss_pred             CcCCC
Q 015676          350 SKVKD  354 (403)
Q Consensus       350 ~k~~~  354 (403)
                      ++++.
T Consensus       299 s~k~q  303 (309)
T COG5070         299 SKKQQ  303 (309)
T ss_pred             HHHHh
Confidence            66544

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.79  E-value=5.1e-08  Score=82.19  Aligned_cols=130  Identities=20%  Similarity=0.307  Sum_probs=100.6

Q ss_pred             HHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHHHHHHH
Q 015676           46 GDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAF  125 (403)
Q Consensus        46 ~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~vpAl  125 (403)
                      .++++++.-+++-|.--++    -+|...-+.+.+.-+.++..+....++.+..++..          .|....+.+.++
T Consensus        10 LsA~fa~L~~iF~KIGl~~----vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~----------~k~~lflilSGl   75 (140)
T COG2510          10 LSALFAGLTPIFAKIGLEG----VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIG----------PKSWLFLILSGL   75 (140)
T ss_pred             HHHHHHHHHHHHHHHhccc----cCccHHHHHHHHHHHHHHHHHHHhcCceecccccC----------cceehhhhHHHH
Confidence            3777788878776643232    34556667888888888888877776655443221          233334555666


Q ss_pred             HHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Q 015676          126 LYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL  189 (403)
Q Consensus       126 ly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~  189 (403)
                      .-.+.-.+.|.|++.=+++...=+..+.+++++++++++||||+|..||+++++.++|++++..
T Consensus        76 a~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          76 AGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            6778889999999999999999999999999999999999999999999999999999987643

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.67  E-value=8.7e-07  Score=74.23  Aligned_cols=70  Identities=29%  Similarity=0.385  Sum_probs=62.5

Q ss_pred             HHHHHH-HHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCC
Q 015676          122 VPAFLY-AINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSL  192 (403)
Q Consensus       122 vpAlly-~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~  192 (403)
                      .-+++. ..++.+.++|+++.+ +...++.++.|+++++++++++|||+++++|.++++.++|++++..++.
T Consensus        39 ~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   39 LAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            335554 488999999999999 5888999999999999999999999999999999999999999977653

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.67  E-value=2.4e-07  Score=77.38  Aligned_cols=108  Identities=24%  Similarity=0.320  Sum_probs=82.4

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHHHHHHHH-HHHHHHHHHHHHhccChHHHH
Q 015676           69 FSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAVPAFL-YAINNYLKFIMQLYFNPATVK  147 (403)
Q Consensus        69 ~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~vpAll-y~l~n~L~f~al~~l~~~t~~  147 (403)
                      +++...++.+.+...+ ...+.....++.. ...   +       .++.....+.+++ ..+.+.+.+.++++.+++..+
T Consensus        17 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~   84 (126)
T PF00892_consen   17 ISPLSITFWRFLIAGI-LLILLLILGRKPF-KNL---S-------PRQWLWLLFLGLLGTALAYLLYFYALKYISASIVS   84 (126)
T ss_pred             CCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCC---C-------hhhhhhhhHhhccceehHHHHHHHHHHhcchhHHH
Confidence            6677888888888876 4333333322210 011   1       1222345666666 589999999999999999999


Q ss_pred             HHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015676          148 MLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  188 (403)
Q Consensus       148 ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~  188 (403)
                      ++.++.|+++++++++++||+++++||+++++.++|+.++.
T Consensus        85 ~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   85 ILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998763

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.47  E-value=3e-06  Score=76.71  Aligned_cols=212  Identities=15%  Similarity=0.139  Sum_probs=141.7

Q ss_pred             HHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCh
Q 015676          124 AFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSALGLPV  203 (403)
Q Consensus       124 Ally~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~~~~~  203 (403)
                      +++.+..|++...|+..++|+..+-+..+.-.++-+++++.||.|+...+.++.++...|++++.+.+...       ..
T Consensus        60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~-------a~  132 (290)
T KOG4314|consen   60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH-------AD  132 (290)
T ss_pred             EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh-------hh
Confidence            55678899999999999999999999999999999999999999999999999999999999987654321       12


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhcc--CCCchhHHHHHHHHHHHHHHH-HHHHHHHhhcCCCccccccCChhHHHH
Q 015676          204 ATGAYLYTLIFVTVPSLASVFNEYALKSQ--YDTSIYHQNLFLYGYGAIFNF-LGIVITAMFKGPSSFDILQGHSKATML  280 (403)
Q Consensus       204 ~~~G~ll~Lla~~~sa~a~Vy~ekllK~~--~~~s~~~~n~~l~~~g~i~~~-~~~l~~~~~~g~~~~~~~~g~~~~~~~  280 (403)
                      .++|....+.+++.++++-|.+++..-+.  .+.+.+  .-.+.++-.++.- |.+.+.  +.|.+.   ++.+....|.
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~F--mS~LGF~NL~~~~~~~lIL~--~T~VE~---~qsFA~~PWG  205 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHF--MSCLGFFNLCFISFPALILA--FTGVEH---LQSFAAAPWG  205 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHH--HHHHHHHHHHHHhhhHHHHH--HhchHH---HHHHhhCCch
Confidence            46788999999999999888888876543  122222  2234444444432 222221  233221   1111111122


Q ss_pred             HHHHHH----HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCC
Q 015676          281 LICNNA----AQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPL  349 (403)
Q Consensus       281 ~il~~a----~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~  349 (403)
                      .+...|    ...+.+-+-+-...+++.+..+-.++...+.+..++-+-..+..++.|..++++|-.+--.|.
T Consensus       206 ~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~  278 (290)
T KOG4314|consen  206 CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE  278 (290)
T ss_pred             hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence            211111    111122222223455555556666667788888888888899999999999999977665543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.46  E-value=0.00017  Score=67.94  Aligned_cols=203  Identities=16%  Similarity=0.066  Sum_probs=126.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 015676          120 LAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRSLPEGTSAL  199 (403)
Q Consensus       120 ~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~~~~~~~~~  199 (403)
                      ..+=+..-...|.++|.+++.+|.++..-+-.+-|+..|++    ..||..-.-|+++.++=++......++        
T Consensus        74 ~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~----~sRr~~d~vwvaLAvlGi~lL~p~~~~--------  141 (292)
T COG5006          74 LLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALL----SSRRLRDFVWVALAVLGIWLLLPLGQS--------  141 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHH----hccchhhHHHHHHHHHHHHhheeccCC--------
Confidence            34445555688999999999999999999999999988765    467777777888776654443322111        


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHH
Q 015676          200 GLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATM  279 (403)
Q Consensus       200 ~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~  279 (403)
                      ..+....|..+.+.+..+|+.+-+..+|.-+..  +..--...-|.. +.++.+|.-.   ..-|+   .++   ++...
T Consensus       142 ~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~--~g~~g~a~gm~v-Aaviv~Pig~---~~ag~---~l~---~p~ll  209 (292)
T COG5006         142 VWSLDPVGVALALGAGACWALYIVLGQRAGRAE--HGTAGVAVGMLV-AALIVLPIGA---AQAGP---ALF---SPSLL  209 (292)
T ss_pred             cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccC--CCchHHHHHHHH-HHHHHhhhhh---hhcch---hhc---ChHHH
Confidence            112345699999999999999888888876543  222222222222 2222222211   01121   111   22221


Q ss_pred             HHHHHHHHHHHHHH-----HHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhc
Q 015676          280 LLICNNAAQGILSS-----FFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  346 (403)
Q Consensus       280 ~~il~~a~gg~~vs-----~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~  346 (403)
                      ..-+..++-...+-     ..++....-.-+...++.+.+.++.+++++||.+|..+|+|+.+|+.+..=.+
T Consensus       210 ~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         210 PLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             HHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence            11122222222222     33455554455556678889999999999999999999999999999865333

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.41  E-value=1e-05  Score=70.70  Aligned_cols=146  Identities=17%  Similarity=0.251  Sum_probs=100.5

Q ss_pred             HHHHHHHHHHhhhhhhhh-ccccC--CcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhh
Q 015676           42 ALVVGDCILVGLQPILVF-TTKVD--GGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNV  118 (403)
Q Consensus        42 l~~~~~~~~~~~~~il~~-~s~~~--g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~  118 (403)
                      ++...+.+..+.+-+++| .-+++  ++...++....+..-..-.++.........+.............+..+..+...
T Consensus         3 ~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~   82 (153)
T PF03151_consen    3 ILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIF   82 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHH
Confidence            345556666677766655 22221  234567777888888887777766544333221100000000000000112234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015676          119 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  187 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv  187 (403)
                      .....+++..+.|...|..+++.+|.+++++.+.|.+.+.++++++++|+++..|+.|+++.++|+.+-
T Consensus        83 ~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   83 LLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            567778888999999999999999999999999999999999999999999999999999999998763

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.28  E-value=0.00011  Score=70.69  Aligned_cols=209  Identities=15%  Similarity=0.115  Sum_probs=123.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccChHHHHHHh-hhHHHHHHHHHHHHhcCCCCHHHHH----HHHHHHHHHHHhhcCCC
Q 015676          118 VLLAVPAFLYAINNYLKFIMQLYFNPATVKMLS-NLKVFVIALLLKIIMKRRFSIIQWE----ALALLLIGISVNQLRSL  192 (403)
Q Consensus       118 ~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~-q~k~i~tAl~s~~~L~~rls~~qw~----aL~ll~~Gv~lv~~~~~  192 (403)
                      +.-.+-+++.++.+..+|.+++++..+...=++ .+.++.++++.+++++|--+..+|+    |++++.+|+.+...++.
T Consensus        46 ~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~  125 (269)
T PF06800_consen   46 IVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDK  125 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccc
Confidence            345677888999999999999999877665444 6788999999999999998888877    89999999999887764


Q ss_pred             CCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchh----HHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 015676          193 PEGTSALGLPVATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIY----HQNLFLYGYGAIFNFLGIVITAMFKGPSSF  268 (403)
Q Consensus       193 ~~~~~~~~~~~~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~----~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~  268 (403)
                      .++....+ ....-|+...+++.+...++.+..+. .+    .+.+    -|.+-|.+.+.+++.        ....   
T Consensus       126 ~~~~~~~~-~~~~kgi~~Ll~stigy~~Y~~~~~~-~~----~~~~~~~lPqaiGm~i~a~i~~~--------~~~~---  188 (269)
T PF06800_consen  126 KSDKSSSK-SNMKKGILALLISTIGYWIYSVIPKA-FH----VSGWSAFLPQAIGMLIGAFIFNL--------FSKK---  188 (269)
T ss_pred             cccccccc-cchhhHHHHHHHHHHHHHHHHHHHHh-cC----CChhHhHHHHHHHHHHHHHHHhh--------cccc---
Confidence            33211001 11223666666666655555544333 22    2222    222222222222111        1111   


Q ss_pred             ccccCChhHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchH----HHHHHHHHHHHHHH
Q 015676          269 DILQGHSKATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTM----NFILGISIVFISMH  343 (403)
Q Consensus       269 ~~~~g~~~~~~~~il~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~----~~~lG~~lVi~gv~  343 (403)
                      .+++..++...+.=+.-+++.+..-+..+..+.-+.-..+-++++++.+.++++++|.=+.    ..++|.++++.|..
T Consensus       189 ~~~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  189 PFFEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             cccccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            1233323322222122244444333333322222222223367899999999999998664    46788888888754

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.13  E-value=3.5e-05  Score=64.16  Aligned_cols=119  Identities=17%  Similarity=0.225  Sum_probs=78.3

Q ss_pred             HHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHH-----HHHHHHHHHHHH
Q 015676          217 VPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATM-----LLICNNAAQGIL  291 (403)
Q Consensus       217 ~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~-----~~il~~a~gg~~  291 (403)
                      ++|...++.++..++.   ++...+.+....+.+ .++....   .+...    ....+...+     ..++..+++..+
T Consensus         2 ~~a~~~~~~k~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (126)
T PF00892_consen    2 SWAIYSVFSKKLLKKI---SPLSITFWRFLIAGI-LLILLLI---LGRKP----FKNLSPRQWLWLLFLGLLGTALAYLL   70 (126)
T ss_pred             eeeeHHHHHHHHhccC---CHHHHHHHHHHHHHH-HHHHHHh---hcccc----ccCCChhhhhhhhHhhccceehHHHH
Confidence            5678889999988873   344444444444443 2222221   11110    112222211     122223455566


Q ss_pred             HHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhc
Q 015676          292 SSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  346 (403)
Q Consensus       292 vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~  346 (403)
                      ....+|+.+....+....++++++.++++++++|+++...++|..+++.|+++.+
T Consensus        71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            6677888888888888899999999999999999999999999999999987653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.13  E-value=2.9e-05  Score=65.03  Aligned_cols=65  Identities=12%  Similarity=0.123  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015676          124 AFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  188 (403)
Q Consensus       124 Ally~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~  188 (403)
                      -++|.+...+.-.+++++|.+....+.++.++++++++++++|||++++||+++.+..+|++++.
T Consensus        44 ~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         44 LACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            36789999999999999999999999999999999999999999999999999999999998874

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.11  E-value=0.00018  Score=70.71  Aligned_cols=66  Identities=17%  Similarity=0.277  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015676          125 FLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  190 (403)
Q Consensus       125 lly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~  190 (403)
                      +++.+.+.+.+.|+.+.|++..+=+..+.+++.++++.++||||+++++|++.++.++|.+++...
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            467889999999999999999999999999999999999999999999999999999999876543

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.06  E-value=7.7e-05  Score=74.87  Aligned_cols=148  Identities=14%  Similarity=0.157  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHhhhhhhhhcc-ccCCc--ccchhHHHHHHHHHHHHHHHHHHHH-HHhhccccccccc--hhHHHHHH
Q 015676           39 LNVALVVGDCILVGLQPILVFTT-KVDGG--FKFSPVSVNFLTEAVKVFFAIVMLL-LQARHKKVGEKSL--LSFSTIAQ  112 (403)
Q Consensus        39 l~~l~~~~~~~~~~~~~il~~~s-~~~g~--~~~~~~~~V~l~E~~Kl~i~~~~l~-~~~~~~~~~~~~~--~~~~~~~~  112 (403)
                      ..+++...+.+.++.+.++.|.. ++.+.  .++++...-...-+...++++.+.. .+..... ..+..  .....+ .
T Consensus       194 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~-~~~~~~~~~~~~~-~  271 (350)
T PTZ00343        194 LAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWV-PVWTNYTANMTNY-T  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHhhhccccc-c
Confidence            35666677788888888877632 22111  1345544433334445544444433 2221000 00000  000000 0


Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015676          113 AARNNVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  188 (403)
Q Consensus       113 ~~r~~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~  188 (403)
                      ...-......-++.|.++|.+.|+++++++|.++++...+||+++.++++++++|+++..|++|.++.++|+.+.+
T Consensus       272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            0000112344577899999999999999999999999999999999999999999999999999999999998764

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.05  E-value=0.00018  Score=68.40  Aligned_cols=130  Identities=14%  Similarity=0.071  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhH
Q 015676           40 NVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVL  119 (403)
Q Consensus        40 ~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  119 (403)
                      ..++....++.|+...++.|....+  ++.++.......-+.-.++........++..     +. +.       ++...
T Consensus       129 G~~~~l~a~~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~-~~-------~~~~~  193 (260)
T TIGR00950       129 GLLLGLGSGISFALGTVLYKRLVKK--EGPELLQFTGWVLLLGALLLLPFAWFLGPNP-----QA-LS-------LQWGA  193 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhc--CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-----Cc-ch-------HHHHH
Confidence            4455666777888887777644322  1111212222233343333333332222111     10 11       11122


Q ss_pred             HHHHHHH-HHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 015676          120 LAVPAFL-YAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGI  184 (403)
Q Consensus       120 ~~vpAll-y~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv  184 (403)
                      ....+++ ..+...+.+.++++.++++..++..+.|+++++++++++||++++.||.+..+.++|+
T Consensus       194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            3444444 5678888999999999999999999999999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.04  E-value=9.1e-05  Score=72.47  Aligned_cols=144  Identities=10%  Similarity=0.036  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHH-----h
Q 015676           39 LNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQ-----A  113 (403)
Q Consensus        39 l~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~  113 (403)
                      ...++...+++.++.+.++.|....+  +++++.+..+.+-....+..+...........   .    ..++.+     .
T Consensus       145 ~G~~~~l~a~~~~a~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~---~----~~~~~~~~~~~~  215 (302)
T TIGR00817       145 AGFLSAMISNITFVSRNIFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAFITEGPPF---L----PHGFMQAISGVN  215 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHHHHcchHH---H----HHHHHHhhcccC
Confidence            35556667778888887776532221  13556555555555555444443332111000   0    000100     0


Q ss_pred             hhhhhH-HHHHHH-HHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015676          114 ARNNVL-LAVPAF-LYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  191 (403)
Q Consensus       114 ~r~~~~-~~vpAl-ly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~  191 (403)
                      ....+. ..+.++ .|...|.+.|.+++++++.++++...++|++++++++++++|+++..|+++.++.++|+.+.+...
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       216 VTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            001111 233443 577778888899999999999999999999999999999999999999999999999999887543

specificities overlap.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.92  E-value=0.00041  Score=69.88  Aligned_cols=63  Identities=8%  Similarity=0.081  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015676          129 INNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  191 (403)
Q Consensus       129 l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~  191 (403)
                      +...+.++++++++|+...+...+.|++++++++++|+|++++.|+++.++.+.|+.+++.+.
T Consensus       268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            455677889999999999999999999999999999999999999999999999999987654

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.90  E-value=0.00017  Score=61.16  Aligned_cols=127  Identities=15%  Similarity=0.210  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCch--hHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHHHH
Q 015676          208 YLYTLIFVTVPSLASVFNEYALKSQYDTSI--YHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNN  285 (403)
Q Consensus       208 ~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~--~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~~~il~~  285 (403)
                      ..+.+++++++|+..++.+--+++. |++.  .+|+.-+.    ++.....+    ..|+.+.  -.+.+...|..+...
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~----~~l~~v~~----~~g~~~~--~~~~~~k~~lflilS   73 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVIL----IFLLIVLL----VTGNWQA--GGEIGPKSWLFLILS   73 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHH----HHHHHHHH----hcCceec--ccccCcceehhhhHH
Confidence            4677899999999887665556653 2221  23433322    21111111    2332110  011233344443333


Q ss_pred             HH----HHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 015676          286 AA----QGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  345 (403)
Q Consensus       286 a~----gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly  345 (403)
                      ++    +-++-.+.+|..+.-........+++++.++|++++||.+|...++|..++.+|+.+.
T Consensus        74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv  137 (140)
T COG2510          74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV  137 (140)
T ss_pred             HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence            32    3334444455555555556677899999999999999999999999999999997654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.79  E-value=0.00092  Score=65.31  Aligned_cols=67  Identities=16%  Similarity=0.118  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015676          124 AFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  190 (403)
Q Consensus       124 Ally~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~  190 (403)
                      ++.-.+...+.+.++++++++..+++..+.|++.++++++++||+++..||++.++.+.|+.+....
T Consensus       222 ~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        222 AAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            3444567888899999999999999999999999999999999999999999999999999887543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.75  E-value=0.001  Score=65.21  Aligned_cols=141  Identities=18%  Similarity=0.295  Sum_probs=97.5

Q ss_pred             HHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHH--HhhccccccccchhHHHHH-Hhhhh
Q 015676           40 NVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLL--QARHKKVGEKSLLSFSTIA-QAARN  116 (403)
Q Consensus        40 ~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~--~~~~~~~~~~~~~~~~~~~-~~~r~  116 (403)
                      .+.++..+.++.+.++..++....  +|+-++...++.+.++.+.+.......  .+....        ...+. +....
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~--~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~--------~~~f~~~~p~~  224 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFK--KYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRS--------AIRFISAHPSV  224 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH--HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhH--------HHHHHHHhHHH
Confidence            555666666677777766652221  122345688899999998888776555  221110        01111 11222


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015676          117 NVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  190 (403)
Q Consensus       117 ~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~  190 (403)
                      ......-++..++.....+.-.+..++.+..++..++-+.+.+++.++.++++++.||.|+++.+.|..+-...
T Consensus       225 ~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~  298 (303)
T PF08449_consen  225 LLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA  298 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence            23344455555565666677789999999999999999999999999999999999999999999999886554

; GO: 0055085 transmembrane transport

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.74  E-value=0.0023  Score=55.11  Aligned_cols=122  Identities=16%  Similarity=0.156  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHHHHH
Q 015676          207 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNA  286 (403)
Q Consensus       207 G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~~~il~~a  286 (403)
                      |++++++++++.+.+-+..++-+++..+.+.....  +   ..+.    ..     ..         ...+.+..+...+
T Consensus         3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~---~~~~----~~-----~~---------p~~~i~lgl~~~~   59 (129)
T PRK02971          3 GYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--I---AALL----AF-----GL---------ALRAVLLGLAGYA   59 (129)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--H---HHHH----HH-----hc---------cHHHHHHHHHHHH
Confidence            67888888888888888888777664222211110  0   0000    00     00         0012333333334


Q ss_pred             HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHH--HhCCCchHHHHHHHHHHHHHHHHhcCCCCc
Q 015676          287 AQGILSSFFFKYADTILKKYSSTVATIFTGLASAA--LFGHTLTMNFILGISIVFISMHQFFSPLSK  351 (403)
Q Consensus       287 ~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~--lfge~lt~~~~lG~~lVi~gv~ly~~~~~k  351 (403)
                      +.-.+-.+++|..+........+...++..+.++.  +|||++|...++|.++|+.|+++.+...+|
T Consensus        60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            44445556667766555554445555666667764  899999999999999999999998764443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.69  E-value=0.0023  Score=62.45  Aligned_cols=64  Identities=20%  Similarity=0.247  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015676          127 YAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  190 (403)
Q Consensus       127 y~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~  190 (403)
                      -.++..+.++++++++++..+++..+.|+++++++++++||+++..||++.++.++|++.....
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            3477778899999999999999999999999999999999999999999999999999887554

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.62  E-value=0.0023  Score=62.37  Aligned_cols=64  Identities=19%  Similarity=0.202  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015676          127 YAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  190 (403)
Q Consensus       127 y~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~  190 (403)
                      -.+...+.+++++++++++..++..+.|+++++++++++||+++..||++.++.+.|+.+.+..
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            3467788999999999999999999999999999999999999999999999999999987654

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.56  E-value=0.0024  Score=61.83  Aligned_cols=129  Identities=10%  Similarity=-0.017  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHH----
Q 015676          208 YLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLIC----  283 (403)
Q Consensus       208 ~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~~~il----  283 (403)
                      +++.++++++.+...+..|+..+++   +.. + .+....+.++..|...    .+...  ..+...+...|..++    
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~---~~~-~-~~~~~~~~~~l~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~   71 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE---PDF-L-WWALLAHSVLLTPYGL----WYLAQ--VGWSRLPATFWLLLAISAV   71 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch---hHH-H-HHHHHHHHHHHHHHHH----Hhccc--CCCCCcchhhHHHHHHHHH
Confidence            4677888999999999888776653   222 1 2222233333333222    11100  001111111222222    


Q ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcC
Q 015676          284 NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       284 ~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                      ..+....+....+++.+.-......+..++++.+++++++||+++...++|.++++.|+.+-..
T Consensus        72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            2333344555567787777777777889999999999999999999999999999999876543

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.53  E-value=0.0048  Score=60.33  Aligned_cols=64  Identities=16%  Similarity=0.130  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015676          128 AINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  191 (403)
Q Consensus       128 ~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~  191 (403)
                      .+...+.+.+++++++.+..++..+.|++.+++++++++|+++..||++.++.++|+.+...+.
T Consensus       226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            3566778889999999999999999999999999999999999999999999999998876543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.52  E-value=0.00089  Score=56.83  Aligned_cols=72  Identities=11%  Similarity=0.210  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccChHHHHHH-hhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015676          120 LAVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  191 (403)
Q Consensus       120 ~~vpAlly~l~n~L~f~al~~l~~~t~~ll-~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~  191 (403)
                      ..+.-++|.+...+...+++++|.+...-+ ...-.+.+++.+++++||+++..||+++.++++|++.+...+
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            456677899999999999999999777655 579999999999999999999999999999999999886544

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.49  E-value=0.00083  Score=57.82  Aligned_cols=68  Identities=16%  Similarity=0.172  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHH--HhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015676          124 AFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKI--IMKRRFSIIQWEALALLLIGISVNQLRS  191 (403)
Q Consensus       124 Ally~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~--~L~~rls~~qw~aL~ll~~Gv~lv~~~~  191 (403)
                      -++|.+...+..++++.+|++...-+.+..+..+++.++.  ++||+++..||+++++.++|+.++..++
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            3468899999999999999999998888888888888885  8999999999999999999999987543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.46  E-value=0.0022  Score=62.66  Aligned_cols=71  Identities=20%  Similarity=0.284  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHh-ccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHH----HHHHHHHHHHHHhhc
Q 015676          119 LLAVPAFLYAINNYLKFIMQL-YFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQW----EALALLLIGISVNQL  189 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~-~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw----~aL~ll~~Gv~lv~~  189 (403)
                      ...+.+++..+.+.+.+.+.+ ++++++..++.+..|+..++++++++||+.+++|+    ++.++...|+.++..
T Consensus       213 ~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       213 LNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            445577778899999999999 99999999999999999999999999999999999    999999999988753

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.45  E-value=0.0014  Score=54.34  Aligned_cols=70  Identities=14%  Similarity=0.066  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccChHHH-HHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Q 015676          120 LAVPAFLYAINNYLKFIMQLYFNPATV-KMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL  189 (403)
Q Consensus       120 ~~vpAlly~l~n~L~f~al~~l~~~t~-~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~  189 (403)
                      ..+...+|.+...+...+++.+|.++. .+-...-.+.+++.+++++||++++.|++++.+..+|++....
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            345567899999999999999998765 5556689999999999999999999999999999999998754

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.41  E-value=0.0015  Score=53.90  Aligned_cols=71  Identities=18%  Similarity=0.227  Sum_probs=62.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccChHHH-HHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhc
Q 015676          119 LLAVPAFLYAINNYLKFIMQLYFNPATV-KMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQL  189 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~~l~~~t~-~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~  189 (403)
                      ...+..+.|.+...+.-.+++++|.++. .+-...-++.|++.+++++||+++..|++++.++.+|++....
T Consensus        32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            3455667788899999999999998665 6677789999999999999999999999999999999988754

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.41  E-value=0.0016  Score=54.54  Aligned_cols=70  Identities=17%  Similarity=0.202  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhccChHHHHHH-hhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015676          121 AVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  190 (403)
Q Consensus       121 ~vpAlly~l~n~L~f~al~~l~~~t~~ll-~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~  190 (403)
                      ...-++|.+...+...+++.+|.++..-+ .....+.+++.+++++||+++..|++++.+.++|++.+...
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            44566788999999999999999777555 56899999999999999999999999999999999998654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.34  E-value=0.002  Score=53.71  Aligned_cols=69  Identities=12%  Similarity=0.043  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccChHHH-HHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015676          120 LAVPAFLYAINNYLKFIMQLYFNPATV-KMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  188 (403)
Q Consensus       120 ~~vpAlly~l~n~L~f~al~~l~~~t~-~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~  188 (403)
                      ..+.-.+|.+...+.-.+++++|.++. .+-...-.+.+++.+++++||++++.||+++.+.+.|++...
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            455567788999999999999998665 566678999999999999999999999999999999998763

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.11  E-value=0.017  Score=56.50  Aligned_cols=134  Identities=9%  Similarity=0.007  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-cccccCChhHHH--HHH
Q 015676          206 GAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS-FDILQGHSKATM--LLI  282 (403)
Q Consensus       206 ~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~-~~~~~g~~~~~~--~~i  282 (403)
                      .|+++++++++++|..+++.+.. .+   .++......=.+++.++.++.+..   .++... ...++......+  ...
T Consensus         8 ~g~~~~l~a~~~wg~~~~~~k~~-~~---~~~~~~~~~R~~~a~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~   80 (296)
T PRK15430          8 QGVLLALAAYFIWGIAPAYFKLI-YY---VPADEILTHRVIWSFFFMVVLMSI---CRQWSYLKTLIQTPQKIFMLAVSA   80 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHh-cC---CCHHHHHHHHHHHHHHHHHHHHHH---HccHHHHHHHHcCHHHHHHHHHHH
Confidence            47889999999999999999653 32   344333333334444333332221   111000 000111111111  111


Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhc
Q 015676          283 CNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  346 (403)
Q Consensus       283 l~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~  346 (403)
                      +..+....+..+.+++.+....+...+..|+++.++++++++|+++...++|.++.+.|+.+..
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            2233334455566678787788888889999999999999999999999999999999987654

>TIGR00688 rarD rarD protein

Probab=97.06  E-value=0.029  Score=53.40  Aligned_cols=132  Identities=8%  Similarity=0.053  Sum_probs=79.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-cccccCChhH-HHHHHH-
Q 015676          207 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSS-FDILQGHSKA-TMLLIC-  283 (403)
Q Consensus       207 G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~-~~~~~g~~~~-~~~~il-  283 (403)
                      |.++++++++++|..++..|. ..+   .++......=.+++.++.++....   ...... ..-++..+.. .+..+. 
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~-~~~---~~~~~i~~~R~~~a~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   75 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKL-LKP---LPATDILGHRMIWSFPFMLLSVTL---FRQWAALIERLKRIQKRPLILSLLL   75 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHH-hcc---CCHHHHHHHHHHHHHHHHHHHHHH---HcchHHHHHHHhCcccchHHHHHHH
Confidence            678889999999999998886 332   344333333233343332222111   111000 0001111111 111111 


Q ss_pred             ---HHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 015676          284 ---NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  345 (403)
Q Consensus       284 ---~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly  345 (403)
                         ..+....+....++|.+........+..|++++++++++++|+++...++|..+.+.|+.+-
T Consensus        76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence               12333344455577777777777888899999999999999999999999999999997643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=96.96  E-value=0.0073  Score=50.52  Aligned_cols=60  Identities=8%  Similarity=0.116  Sum_probs=47.0

Q ss_pred             HHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 015676          286 AAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  345 (403)
Q Consensus       286 a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly  345 (403)
                      ++...+.+.++|+.+--......+++++++.++|+++|||++|...++|.++++.|+.+-
T Consensus        48 ~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         48 GLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            334455566777766444444455889999999999999999999999999999998754

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.95  E-value=0.015  Score=56.14  Aligned_cols=115  Identities=17%  Similarity=0.159  Sum_probs=83.6

Q ss_pred             HHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHHHH
Q 015676           43 LVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLAV  122 (403)
Q Consensus        43 ~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~v  122 (403)
                      .+..+.+.|..+..+.++.+.+      +.+ .++-|.+.++++..++....+      ++...        |..++=.+
T Consensus       142 ~Ll~stigy~~Y~~~~~~~~~~------~~~-~~lPqaiGm~i~a~i~~~~~~------~~~~~--------k~~~~nil  200 (269)
T PF06800_consen  142 ALLISTIGYWIYSVIPKAFHVS------GWS-AFLPQAIGMLIGAFIFNLFSK------KPFFE--------KKSWKNIL  200 (269)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCC------hhH-hHHHHHHHHHHHHHHHhhccc------ccccc--------cchHHhhH
Confidence            3444566777777777764433      323 366778888887665543221      11111        12334578


Q ss_pred             HHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 015676          123 PAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALA  178 (403)
Q Consensus       123 pAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~  178 (403)
                      +++++.+.|.+++++.+..-.++.-.+.|+.++...+-+.++|||+=+++|+....
T Consensus       201 ~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~  256 (269)
T PF06800_consen  201 TGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL  256 (269)
T ss_pred             HHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence            99999999999999999999999999999999999999999999998988875443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.94  E-value=0.012  Score=49.96  Aligned_cols=63  Identities=21%  Similarity=0.227  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHHhh-hhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCC
Q 015676          286 AAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP  348 (403)
Q Consensus       286 a~gg~~vs~v~Ky~~-~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~  348 (403)
                      ++.-.+.+.++|+.+ ++.-...+.+.++.+.++++++|||++|+..++|+.+++.|+..-+..
T Consensus        41 ~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         41 SLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            444455566677654 333344456788999999999999999999999999999999876543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.81  E-value=0.018  Score=48.17  Aligned_cols=59  Identities=20%  Similarity=0.221  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHhh-hhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcC
Q 015676          289 GILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       289 g~~vs~v~Ky~~-~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                      -.+.+..+|+.+ ++.-+.-+.+..+.++++++++|||++|+..++|+++++.|+..-+.
T Consensus        44 f~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         44 FWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            344456666644 22333334568899999999999999999999999999999987654

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.62  E-value=0.005  Score=51.62  Aligned_cols=71  Identities=20%  Similarity=0.247  Sum_probs=63.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccChHHHHHH-hhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015676          117 NVLLAVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  187 (403)
Q Consensus       117 ~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll-~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv  187 (403)
                      +++|.+|=++|.....+.|+.+...|.+...-+ +++.-++|++.++++.+|..+++.|+++++.++|+.+.
T Consensus        41 n~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   41 NPKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            347899999999999999999999999877655 68999999999999989999999999999999998753

Many members are annotated as potential transmembrane proteins.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=96.61  E-value=0.034  Score=46.31  Aligned_cols=60  Identities=23%  Similarity=0.248  Sum_probs=48.8

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcC
Q 015676          287 AQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       287 ~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                      .......+..++.+. .......+.++++.+++.++|+|+++...++|.+++++|+.+-..
T Consensus        47 ~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~  106 (113)
T PF13536_consen   47 VAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAW  106 (113)
T ss_pred             HHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhh
Confidence            334455566788875 455666789999999999999999999999999999999876554

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.59  E-value=0.0068  Score=57.35  Aligned_cols=57  Identities=23%  Similarity=0.287  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 015676          129 INNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGIS  185 (403)
Q Consensus       129 l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~  185 (403)
                      +-..|-.++++.+|..+|.++.++.|.+-|+..+++|+|++|..||+++++...+.+
T Consensus       222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            455677889999999999999999999999999999999999999999999888765

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.58  E-value=0.0045  Score=61.09  Aligned_cols=71  Identities=14%  Similarity=0.224  Sum_probs=65.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q 015676          118 VLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQ  188 (403)
Q Consensus       118 ~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~  188 (403)
                      +.+.+-++++.++|...|..+.+++|-|+++....|-+.....+++++++++++.|..+.++.++|+.+-.
T Consensus       236 ~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  236 LILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            34455568999999999999999999999999999999999999999999999999999999999998854

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.52  E-value=0.16  Score=48.27  Aligned_cols=71  Identities=23%  Similarity=0.272  Sum_probs=62.3

Q ss_pred             HHHHHHHHH-HHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015676          120 LAVPAFLYA-INNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  190 (403)
Q Consensus       120 ~~vpAlly~-l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~  190 (403)
                      ....+++-. +...+.+.+++..+++....+..+.|++..++++++++|+.+..||++..+.+.|+.+...+
T Consensus       217 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            344444444 67888999999999999999999999999999999999999999999999999999988654

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.47  E-value=0.013  Score=57.23  Aligned_cols=67  Identities=15%  Similarity=0.289  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015676          125 FLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  191 (403)
Q Consensus       125 lly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~  191 (403)
                      +.+.+.+.+.|.|+.+-|++...=+..+.++..|+++.++||||++..-.+|.++.++|-.++....
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha  138 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA  138 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence            4577899999999999999999999999999999999999999999999999999999988766544

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.46  E-value=0.012  Score=47.51  Aligned_cols=59  Identities=12%  Similarity=0.273  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHHHhccChHHH-HHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 015676          122 VPAFLYAINNYLKFIMQLYFNPATV-KMLSNLKVFVIALLLKIIMKRRFSIIQWEALALL  180 (403)
Q Consensus       122 vpAlly~l~n~L~f~al~~l~~~t~-~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll  180 (403)
                      ..-.+|.+...+.-.+++++|.++. .+...+..+.+++.+.+++||++|..||.++.+.
T Consensus        34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   34 LAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3344789999999999999999777 5556799999999999999999999999999863

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.23  E-value=0.23  Score=41.43  Aligned_cols=60  Identities=20%  Similarity=0.087  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHHHhh-hhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 015676          286 AAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  345 (403)
Q Consensus       286 a~gg~~vs~v~Ky~~-~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly  345 (403)
                      ++.-.+.+..+|+.+ ++.-..-+.+..+.+.+.++++|||++|+..++|+++++.|+..-
T Consensus        46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            344455666677654 334445556778999999999999999999999999999998764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.04  E-value=0.068  Score=52.62  Aligned_cols=116  Identities=12%  Similarity=0.068  Sum_probs=78.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHH
Q 015676          204 ATGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLIC  283 (403)
Q Consensus       204 ~~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~~~il  283 (403)
                      ..+|.++.+.++++.+.+.++.|+-.++.++.+.... -.    +     ..              .+.  ++.+|.-++
T Consensus         5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-~~----~-----~~--------------~l~--~~~W~~G~~   58 (300)
T PF05653_consen    5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-SG----G-----RS--------------YLR--RPLWWIGLL   58 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-ch----h-----hH--------------HHh--hHHHHHHHH
Confidence            3568899999999999999888887665422111100 00    0     00              001  122222233


Q ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHh
Q 015676          284 NNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQF  345 (403)
Q Consensus       284 ~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly  345 (403)
                      ..++|.+.-...+.++...+-....+++++++.+++.++++|+++...++|.++++.|+.+-
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li  120 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI  120 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence            33445544445566688777777788999999999999999999999999999999997644

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=95.93  E-value=0.085  Score=43.64  Aligned_cols=59  Identities=19%  Similarity=0.246  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHhh-hhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcC
Q 015676          289 GILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       289 g~~vs~v~Ky~~-~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                      -.+.+..+|+.+ .+.-+.-+.+.++.+++.++++|||+++...++|..+++.|+..-+.
T Consensus        44 f~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          44 FYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            345566677754 34445556678899999999999999999999999999999876543

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.92  E-value=0.084  Score=43.75  Aligned_cols=61  Identities=8%  Similarity=0.117  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHHHhh-hhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhc
Q 015676          286 AAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFF  346 (403)
Q Consensus       286 a~gg~~vs~v~Ky~~-~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~  346 (403)
                      ++.-.+.+..+|..+ ++.-+.-+.+.++.+.+.++++|||++|+..++|+.+++.|+..-+
T Consensus        40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            333445556666544 3444555667889999999999999999999999999999987653

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.81  E-value=0.12  Score=49.67  Aligned_cols=67  Identities=19%  Similarity=0.091  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHHHhh-hhHHHHHhhHHHHHHHHHHHH-HhCCCc-----hHHHHHHHHHHHHHHHHhcCCCCcC
Q 015676          286 AAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAA-LFGHTL-----TMNFILGISIVFISMHQFFSPLSKV  352 (403)
Q Consensus       286 a~gg~~vs~v~Ky~~-~i~k~~a~~~~iv~t~lls~~-lfge~l-----t~~~~lG~~lVi~gv~ly~~~~~k~  352 (403)
                      +.|++++-.++|..+ ++--.+..+.+.+..+..|-+ +||.+.     .+.-.+|++++++|..+|...+.+.
T Consensus        66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            445555555555543 222234444555666666644 676543     4466899999999999987654444

The region concerned is approximately 280 residues long.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.54  E-value=0.21  Score=49.89  Aligned_cols=139  Identities=16%  Similarity=0.059  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccc-cccccchhHHHHHHhh
Q 015676           36 TRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKK-VGEKSLLSFSTIAQAA  114 (403)
Q Consensus        36 ~~~l~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~  114 (403)
                      ...+.-+++...++.|+.+-++.++.-.+    ++....+-+--+..++++.+.+..-.+.+- .-+++   .       
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~----~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~---~-------  230 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLVKK----APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT---S-------  230 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhccc----CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC---h-------
Confidence            44666778888999999998887643222    234455556666677776554332222111 11111   1       


Q ss_pred             hhhhHHHHHHHHHHHH----HHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015676          115 RNNVLLAVPAFLYAIN----NYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  190 (403)
Q Consensus       115 r~~~~~~vpAlly~l~----n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~  190 (403)
                          ....+-+.|++.    ..+.-+.++..+|+.+++-..+..+...++..++.|++.++..++|.++..+|+++....
T Consensus       231 ----~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  231 ----QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             ----hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence                111122223332    233345677788888888888899999999999999999999999999999999987665


Q ss_pred             CC
Q 015676          191 SL  192 (403)
Q Consensus       191 ~~  192 (403)
                      +.
T Consensus       307 ~~  308 (334)
T PF06027_consen  307 ES  308 (334)
T ss_pred             CC
Confidence            43

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.44  E-value=3.3  Score=41.60  Aligned_cols=104  Identities=12%  Similarity=0.038  Sum_probs=70.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccChHHHHHH-hhhHHHHHHHHHHHHhcCCC---C----HHHHHHHHHHHHHHHHhhc-
Q 015676          119 LLAVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRF---S----IIQWEALALLLIGISVNQL-  189 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~~l~~~t~~ll-~q~k~i~tAl~s~~~L~~rl---s----~~qw~aL~ll~~Gv~lv~~-  189 (403)
                      .-.+-+++..+.|.+++.+.+++..+...-+ ..+..+.++++..++++|--   +    ..-.+++++.++|+++... 
T Consensus        75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            3445667788999999999999988766544 46888999999999988532   3    3456778888899999877 


Q ss_pred             ---CCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHH
Q 015676          190 ---RSLPEGTSALGLPVATGAYLYTLIFVTVPSLAS  222 (403)
Q Consensus       190 ---~~~~~~~~~~~~~~~~~G~ll~Lla~~~sa~a~  222 (403)
                         ++...+....+.....-|+.+.+++.+.+++.+
T Consensus       155 g~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        155 GQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             hhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence               332111000011112347777787777777666

>TIGR00803 nst UDP-galactose transporter

Probab=95.15  E-value=0.026  Score=52.59  Aligned_cols=67  Identities=10%  Similarity=0.079  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 015676          119 LLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGIS  185 (403)
Q Consensus       119 ~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~  185 (403)
                      ....+.++.+++..+..+.+++.|+.+..+...+.++++++++.++++++++..||++..+.+.|+.
T Consensus       154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~  220 (222)
T TIGR00803       154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF  220 (222)
T ss_pred             HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence            3455567778888899999999999999999999999999999999999999999999999998864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.03  E-value=0.29  Score=47.76  Aligned_cols=138  Identities=16%  Similarity=0.156  Sum_probs=95.1

Q ss_pred             hHHHHHHHHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhh
Q 015676           35 KTRFLNVALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAA  114 (403)
Q Consensus        35 k~~~l~~l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  114 (403)
                      -...+.+.-+.-+.+....|.-+-+      +|.-++...++-.++.-.+.+..-++-++.     .++.   -.|...=
T Consensus       172 ~G~~Ll~~~L~fDgfTn~tQd~lf~------~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-----~~~a---v~F~~~h  237 (327)
T KOG1581|consen  172 IGILLLFGYLLFDGFTNATQDSLFK------KYKVSSLHMMFGVNLFSAILNGTYLILQGH-----LLPA---VSFIKEH  237 (327)
T ss_pred             HhHHHHHHHHHHHhhHHhHHHHHhc------cCCccHhHHHHHHHHHHHHHHHHhhhcCCC-----CchH---HHHHHcC
Confidence            3344555555555566666765544      334556666777777777777665443321     1111   1111111


Q ss_pred             hh-hhHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 015676          115 RN-NVLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISV  186 (403)
Q Consensus       115 r~-~~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~l  186 (403)
                      ++ .+-+.+-+.+-++..+..|+-++...+-++..+.-++=+++.+++.+..+++++..||.++.+.+.|+..
T Consensus       238 p~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  238 PDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             hhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            11 2235666777788888889999999999999999999999999999999999999999999999988865

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=94.85  E-value=1.2  Score=43.29  Aligned_cols=127  Identities=20%  Similarity=0.225  Sum_probs=85.4

Q ss_pred             HHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHH-HHHHHHHHHHHhhccccccccchhHHHHHH--hhhhhhHHHH
Q 015676           46 GDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVK-VFFAIVMLLLQARHKKVGEKSLLSFSTIAQ--AARNNVLLAV  122 (403)
Q Consensus        46 ~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~K-l~i~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~v  122 (403)
                      ..|+.|+.++.+.|..+.|      +.+- +.-|.+= +..|+..+........           +.+  ..+.++.+..
T Consensus       155 ~la~sf~~Ygl~RK~~~v~------a~~g-~~lE~l~l~p~al~yl~~l~~~~~-----------~~~~~~~~~~~LLv~  216 (293)
T COG2962         155 ALALSFGLYGLLRKKLKVD------ALTG-LTLETLLLLPVALIYLLFLADSGQ-----------FLQQNANSLWLLLVL  216 (293)
T ss_pred             HHHHHHHHHHHHHHhcCCc------hHHh-HHHHHHHHhHHHHHHHHHHhcCch-----------hhhcCCchHHHHHHH
Confidence            4566777777777766544      3232 4455554 4445554443321110           000  1222333444


Q ss_pred             HHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q 015676          123 PAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLR  190 (403)
Q Consensus       123 pAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~  190 (403)
                      -+..-++--.+.-.|-+.+|.++.-++.+..|...-+++.+++||+++.-|+.+-+.+.+|+++...+
T Consensus       217 aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         217 AGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             hhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            44445556666667888899999999999999999999999999999999999999999999887554

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=94.70  E-value=0.26  Score=47.03  Aligned_cols=68  Identities=21%  Similarity=0.145  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCCCcC
Q 015676          285 NAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKV  352 (403)
Q Consensus       285 ~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~~k~  352 (403)
                      -++.+.+....+++.|+.+-.......+++|+++++++++.+++..+|++..+.+.|+.+........
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            35566777778899998888888889999999999999999999999999999999998877654443

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.38  E-value=0.19  Score=40.52  Aligned_cols=49  Identities=18%  Similarity=0.291  Sum_probs=26.4

Q ss_pred             HHHHHHHHHhh-hhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 015676          290 ILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIV  338 (403)
Q Consensus       290 ~~vs~v~Ky~~-~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lV  338 (403)
                      .+.+..+|+.+ ++.-...+.+.++.+.+.++++|||++|...++|+.+|
T Consensus        44 ~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   44 YFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            45556666655 23334445678899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=93.97  E-value=3.8  Score=35.52  Aligned_cols=130  Identities=18%  Similarity=0.144  Sum_probs=69.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHHHHHHH
Q 015676          209 LYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNAAQ  288 (403)
Q Consensus       209 ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~~~il~~a~g  288 (403)
                      ++.+++..+.++++..+-++-|.-  .+++.-...-+..|.+......+.   .+++ ....+.+.+|+.|.-=+..++.
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~~--gs~~~as~i~~~~G~i~~~i~~~~---~~~~-~~~~~~~~p~w~~lGG~lG~~~   77 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKAL--GSPLVASFISFGVGFILLLIILLI---TGRP-SLASLSSVPWWAYLGGLLGVFF   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHHHHHHHH---hccc-ccchhccCChHHhccHHHHHHH
Confidence            445556666777788888877664  346555555555565554443332   2322 1122334456555422222222


Q ss_pred             HHHHHHHHHHhhhhH-HHHHhhHHHHHHHHHHHH-Hh---CCCchHHHHHHHHHHHHHHHH
Q 015676          289 GILSSFFFKYADTIL-KKYSSTVATIFTGLASAA-LF---GHTLTMNFILGISIVFISMHQ  344 (403)
Q Consensus       289 g~~vs~v~Ky~~~i~-k~~a~~~~iv~t~lls~~-lf---ge~lt~~~~lG~~lVi~gv~l  344 (403)
                      -....+.++..+... ......-+++.+.++..+ +|   .++++...++|.++++.|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            222223333333221 222223345556666655 34   468999999999999999864

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=93.78  E-value=0.17  Score=42.52  Aligned_cols=65  Identities=17%  Similarity=0.257  Sum_probs=48.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhh-hhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 015676          280 LLICNNAAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ  344 (403)
Q Consensus       280 ~~il~~a~gg~~vs~v~Ky~~-~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~l  344 (403)
                      +..+.+..|.+.-.+.+..+| ++....+++++-++|.+.++++.++..+...++|+++|+.|+.+
T Consensus        46 ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   46 IPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            344444445555445565565 34445667899999999999888888899999999999999764

Many members are annotated as potential transmembrane proteins.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=93.73  E-value=1.3  Score=44.53  Aligned_cols=136  Identities=13%  Similarity=0.076  Sum_probs=79.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHH--
Q 015676          205 TGAYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLI--  282 (403)
Q Consensus       205 ~~G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~~~i--  282 (403)
                      ..|++..+++++++|.-.+=++| .|+-    .|. ++|. ..+++..++..+......-+...+.++..+...+...  
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~w----~wE-~~W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l   78 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKK-VKKW----SWE-TMWS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL   78 (345)
T ss_pred             HHHHHHHHHHHHHhhcccccccc-cCCC----chh-HHHH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence            45888889999988876665555 3432    222 2243 3333222211111011111111122333444333322  


Q ss_pred             --HHHHHHHHHHHHHHHHhh-hhHHHHHhhHHHHHHHHHHHHHhCCCc-------hHHHHHHHHHHHHHHHHhcC
Q 015676          283 --CNNAAQGILSSFFFKYAD-TILKKYSSTVATIFTGLASAALFGHTL-------TMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       283 --l~~a~gg~~vs~v~Ky~~-~i~k~~a~~~~iv~t~lls~~lfge~l-------t~~~~lG~~lVi~gv~ly~~  347 (403)
                        +.-++|++.....+|+.+ +..-..++.++.+++++++.+++||-.       ....++|.+++++|+.+-..
T Consensus        79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence              233678888888899876 445556777788999999999998643       23568899999999887665

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=93.00  E-value=0.19  Score=47.31  Aligned_cols=70  Identities=17%  Similarity=0.315  Sum_probs=62.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhccChHHHHHHhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q 015676          118 VLLAVPAFLYAINNYLKFIMQLYFNPATVKMLSNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVN  187 (403)
Q Consensus       118 ~~~~vpAlly~l~n~L~f~al~~l~~~t~~ll~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv  187 (403)
                      +-+...|+.-++...+.|....+..|-+-+++..++-+||.+.++++++..++.+||++-++.+.|...=
T Consensus       242 ~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D  311 (337)
T KOG1580|consen  242 WDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD  311 (337)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence            3455667777888899999999999999999999999999999999999999999999999999988653

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=92.28  E-value=0.031  Score=52.80  Aligned_cols=130  Identities=15%  Similarity=0.224  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHhhhhhhhhccccCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhHHHHHHhhhhhhHHH
Q 015676           42 ALVVGDCILVGLQPILVFTTKVDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEKSLLSFSTIAQAARNNVLLA  121 (403)
Q Consensus        42 l~~~~~~~~~~~~~il~~~s~~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  121 (403)
                      +....-++.+++.|...  .|..|+ +|..+   .=+-+--+++++.+++...     ++.   +++.       ...-.
T Consensus         5 liaL~P~l~WGsip~v~--~k~GG~-p~qQ~---lGtT~GALifaiiv~~~~~-----p~~---T~~~-------~iv~~   63 (288)
T COG4975           5 LIALLPALGWGSIPLVA--NKFGGK-PYQQT---LGTTLGALIFAIIVFLFVS-----PEL---TLTI-------FIVGF   63 (288)
T ss_pred             HHHHHHHHHhcccceee--eecCCC-hhHhh---hhccHHHHHHHHHHheeec-----Ccc---chhh-------HHHHH
Confidence            44445667788887654  344444 33332   2333444666666554421     111   1222       22345


Q ss_pred             HHHHHHHHHHHHHHHHHhccChHHHHHHh-hhHHHHHHHHHHHHhcCCCCHHHH----HHHHHHHHHHHHhhcCCC
Q 015676          122 VPAFLYAINNYLKFIMQLYFNPATVKMLS-NLKVFVIALLLKIIMKRRFSIIQW----EALALLLIGISVNQLRSL  192 (403)
Q Consensus       122 vpAlly~l~n~L~f~al~~l~~~t~~ll~-q~k~i~tAl~s~~~L~~rls~~qw----~aL~ll~~Gv~lv~~~~~  192 (403)
                      +.+++.......+|-|.+++..+...=++ .+..+-+.+++++.++|--+..|.    .|++++.+|+.+...++.
T Consensus        64 isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          64 ISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             HhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            66777888889999999999887775444 578899999999999998888775    688999999988777653

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.66  E-value=22  Score=31.39  Aligned_cols=133  Identities=14%  Similarity=0.111  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCChhHHHHHHHHHH
Q 015676          207 AYLYTLIFVTVPSLASVFNEYALKSQYDTSIYHQNLFLYGYGAIFNFLGIVITAMFKGPSSFDILQGHSKATMLLICNNA  286 (403)
Q Consensus       207 G~ll~Lla~~~sa~a~Vy~ekllK~~~~~s~~~~n~~l~~~g~i~~~~~~l~~~~~~g~~~~~~~~g~~~~~~~~il~~a  286 (403)
                      ..+..+++..+..+++..+-++.|.-  .++..-...-+..|++..+...+   +.++..........+||.|.-=   .
T Consensus         6 ~ll~~i~aG~~l~~Q~~iN~qL~~~~--~spl~As~isf~vGt~~L~~l~l---~~~~~~~~a~~~~~pwW~~~GG---~   77 (150)
T COG3238           6 YLLFAILAGALLPLQAAINGRLARYL--GSPLLASLISFLVGTVLLLILLL---IKQGHPGLAAVASAPWWAWIGG---L   77 (150)
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHHHHHH---HhcCCCchhhccCCchHHHHcc---c
Confidence            34555666666777777888876654  23433323323334433222222   2333322222234456655431   2


Q ss_pred             HHHHHHHHHHH----HhhhhHHHHHhhHHHHHHHHHHHH-HhC---CCchHHHHHHHHHHHHHHHHhcC
Q 015676          287 AQGILSSFFFK----YADTILKKYSSTVATIFTGLASAA-LFG---HTLTMNFILGISIVFISMHQFFS  347 (403)
Q Consensus       287 ~gg~~vs~v~K----y~~~i~k~~a~~~~iv~t~lls~~-lfg---e~lt~~~~lG~~lVi~gv~ly~~  347 (403)
                      +|.+++..-+.    .....+.....+-+++.+.++.-+ +||   .+++..-++|++++++|+++...
T Consensus        78 lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          78 LGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             hhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence            23333332222    222223333334455556666555 333   57899999999999999776544

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=84.46  E-value=0.51  Score=46.38  Aligned_cols=69  Identities=12%  Similarity=0.103  Sum_probs=60.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Q 015676          276 KATMLLICNNAAQGILSSFFFKYADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQ  344 (403)
Q Consensus       276 ~~~~~~il~~a~gg~~vs~v~Ky~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~l  344 (403)
                      +..|.-++..++|-+.-...+-++..++.+...+++++.+++++..++.|.+++.-.+|.++.+.|..+
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~  133 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTT  133 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEE
Confidence            455666778888888777777789999999999999999999999999999999999999999998653

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=82.55  E-value=1.2  Score=42.84  Aligned_cols=49  Identities=20%  Similarity=0.238  Sum_probs=40.8

Q ss_pred             hhhhHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCCC
Q 015676          299 ADTILKKYSSTVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLS  350 (403)
Q Consensus       299 ~~~i~k~~a~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~~  350 (403)
                      +|+++   .+..++++++++++.+++|+.|..-.+|..+-+.|+.+-.+|+-
T Consensus       124 aDA~v---ItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF  172 (346)
T KOG4510|consen  124 ADAVV---ITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF  172 (346)
T ss_pred             hheEE---EEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence            45554   34467999999999999999999999999999999887776643

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=80.14  E-value=8.8  Score=37.30  Aligned_cols=149  Identities=21%  Similarity=0.206  Sum_probs=89.4

Q ss_pred             ccccCCcccchhHHHHHHHHHHHHHHHHhhhhhhhhccc-cCCcccchhHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 015676           24 AYDRHRHQVSSKTRFLNVALVVGDCILVGLQPILVFTTK-VDGGFKFSPVSVNFLTEAVKVFFAIVMLLLQARHKKVGEK  102 (403)
Q Consensus        24 ~~~~~~~~~~~k~~~l~~l~~~~~~~~~~~~~il~~~s~-~~g~~~~~~~~~V~l~E~~Kl~i~~~~l~~~~~~~~~~~~  102 (403)
                      +-|.+....+.+|+.+.+-++.-+.+.-+.+++.++-.+ .-|+   ++-+..|.+-++-+-.-+++    ++       
T Consensus       149 ~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGK---h~~EalFytH~LsLP~Flf~----~~-------  214 (330)
T KOG1583|consen  149 GLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGK---HWKEALFYTHFLSLPLFLFM----GD-------  214 (330)
T ss_pred             ccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ChHHHHHHHHHhccchHHHh----cc-------
Confidence            444444456667777666666666666666777765222 2233   23466777777765443332    11       


Q ss_pred             cchhHHHHHHhhhh------hhHHHHHHH-HHHHHHHHHHH-HHhc-------cChHHHHHHhhhHHHHHHHHHHHHhcC
Q 015676          103 SLLSFSTIAQAARN------NVLLAVPAF-LYAINNYLKFI-MQLY-------FNPATVKMLSNLKVFVIALLLKIIMKR  167 (403)
Q Consensus       103 ~~~~~~~~~~~~r~------~~~~~vpAl-ly~l~n~L~f~-al~~-------l~~~t~~ll~q~k~i~tAl~s~~~L~~  167 (403)
                      +.  ..++....+.      ..-..+|.. .|.+.|.+..+ ..+.       .++-|.++...++=.+.-++|...++-
T Consensus       215 di--v~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~N  292 (330)
T KOG1583|consen  215 DI--VSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFEN  292 (330)
T ss_pred             hH--HHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecC
Confidence            00  0111111111      112336666 47777776544 3332       344455666667778888999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHhh
Q 015676          168 RFSIIQWEALALLLIGISVNQ  188 (403)
Q Consensus       168 rls~~qw~aL~ll~~Gv~lv~  188 (403)
                      .++++.|++..+.+.|..+..
T Consensus       293 pft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  293 PFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	403
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.2
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.16
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.09
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.49

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.20  E-value=9.2e-06  Score=66.72  Aligned_cols=71  Identities=17%  Similarity=0.208  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhccChHHHHHH-hhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015676          121 AVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  191 (403)
Q Consensus       121 ~vpAlly~l~n~L~f~al~~l~~~t~~ll-~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~  191 (403)
                      ..-.++|.+...+...+++++|.+....+ ..+.|+.+++++++++||++++.||+++.+..+|+..+...+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44456788899999999999999999877 899999999999999999999999999999999999986643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.16  E-value=2.5e-06  Score=72.97  Aligned_cols=84  Identities=17%  Similarity=0.109  Sum_probs=42.8

Q ss_pred             HHHHHHHHHHHHHHHhhhhHHHHH-hhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCccc
Q 015676          284 NNAAQGILSSFFFKYADTILKKYS-STVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSPLSKVKDEPKNISLE  362 (403)
Q Consensus       284 ~~a~gg~~vs~v~Ky~~~i~k~~a-~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~~~k~~~~~~~~~~~  362 (403)
                      ..++.-.+....+|+.+....... +.+.+++++++++++|||++|...++|+++|+.|+++.+..... ...++...+|
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~~~-~~~~~~~~v~  117 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRS-TPHEFEAYVE  117 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC--------------
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCCC-CCCCcccchh
Confidence            334444556677777775544444 78999999999999999999999999999999999988754322 2224555666


Q ss_pred             ccCCcc
Q 015676          363 SVDSPK  368 (403)
Q Consensus       363 ~~~~~~  368 (403)
                      ++|..|
T Consensus       118 ~~~~~~  123 (137)
T 2i68_A          118 QKLISE  123 (137)
T ss_dssp             ------
T ss_pred             hhhcCH
Confidence            666554

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.09  E-value=5.2e-06  Score=70.95  Aligned_cols=71  Identities=17%  Similarity=0.208  Sum_probs=52.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhccChHHHHHH-hhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcCC
Q 015676          121 AVPAFLYAINNYLKFIMQLYFNPATVKML-SNLKVFVIALLLKIIMKRRFSIIQWEALALLLIGISVNQLRS  191 (403)
Q Consensus       121 ~vpAlly~l~n~L~f~al~~l~~~t~~ll-~q~k~i~tAl~s~~~L~~rls~~qw~aL~ll~~Gv~lv~~~~  191 (403)
                      .+-.++|.+...+.+.+++++|++....+ ..+.|+++++++++++||++++.||+++++.++|+.++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34456788999999999999999988777 899999999999999999999999999999999999987643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.49  E-value=0.00077  Score=55.09  Aligned_cols=63  Identities=21%  Similarity=0.205  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHHhhhhHHHHH-hhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhcCC
Q 015676          286 AAQGILSSFFFKYADTILKKYS-STVATIFTGLASAALFGHTLTMNFILGISIVFISMHQFFSP  348 (403)
Q Consensus       286 a~gg~~vs~v~Ky~~~i~k~~a-~~~~iv~t~lls~~lfge~lt~~~~lG~~lVi~gv~ly~~~  348 (403)
                      ++.-.+....+|+.+.-..... ..+.++++.++++++|||++|...++|.++++.|+.+.+..
T Consensus        41 ~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3344555667887775444333 67899999999999999999999999999999999887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00