Citrus Sinensis ID: 015715

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400--
Protein Sequence
MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEAIEQDKSWVDPFPRKQRRKKERRQDH
Secondary Structure (PSIPRED)
cccccEEEEEEEEEEEccEEEEEEEcHHHHHHHHHHHHHHHHEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHHHHHHcccccEEEEEEEcccccccccccccccEEEEEEEccccHHHHcccccccccccccEEEEEccccccccccHHHHHHHHHHHcccccccccccccccEEEEEEEEccccccccEEEcccccccccccccccccccEEEEEcccccHHHHHHHHHHccccccccccccccccccccccccccEEEEEEEEEEEcccccccccccccccccHHHHHHHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHcHHcccEEEEEEcccccEEEEccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEccccccEccccccccHccccccccccEEEEEEEcHHHHHHHHHHHHHccccccEEEEEEEcccccccccccccccEEEEEEccccHHHHHHHcccccHcccccEEEEEccccccccccHHHHHHHHHHccccEccccccccccEEEEEEEEEccccEEEEEEEcccccccccccccccccHHHHHHHcHHccHHHHHHHHHHHHHHHHccccccccccHcccccccccEEEEEcHEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHcccccccccc
Coil and Loop (DISEMBL)
mksiktwrllkrnsfsdgvkFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQtemeakfspfdiskgsrfssgrlkslprgivqarsdlelrplwstsssrkkfgvysnrnllaipagikqkdNVDAIVRKFLPENFTVILFHYdgdvnawrgldwsnKAIHIAAQNQTKWWfakrflhpdvvsnydYIFLwdedlgvenfdprryLEIVksegfeisqpaldpnsteiHHKFTIRARTKKFHRRVYDlrgsvkctnisegppctgfvegmapvfsRSAWYCAWHLIQNDLVhgwgmdmklgycaqgdrtknvgiidSEYVVHQGiqtlggqpptrkstkreelakrhgpapvdLRAEIRRQSTMELQIFKKRWNEAIeqdkswvdpfprkqrrkkerrqdh
Flexible Loop (DISEMBL)
mksiktwrllkrnsfsdgvkFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTemeakfspfdiskgsrfssgrlkslprgivqarsdlelrplwstsssrkkfgvysnrnllaipagikqkdNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGfeisqpaldpnsteihhkftirartkkfhRRVYDLrgsvkctnisegppcTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQgiqtlggqpptrkstkreelakrhgpapvdlraeirRQSTMELQIFKKRWneaieqdkswvdpfprkqrrkkerrqdh
Low Complexity Region (SEG)
MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEAIEQDKSWVDPFPrkqrrkkerrqDH
Disordered region (IsUnstruct)
*****TWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEA***********************************PLW******KKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQ*AL***STEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQT**************************************LQIFKKRWNEAI************************
Disordered Region (DISOPRED)
********LLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYY********************************GIVQARSDLEL********************LLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRA***KFH*RVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGI**************************VDLRAEIRRQSTMELQIFKKRWNEAIEQDKSWV*****************
Disordered Region (DISEMBL)
MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTL********************PAPVDLRAEIRRQSTMELQIFKKRWNEAIEQDKSWVDPFP*************
Disordered Region (DISPRO)
***IKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYK***********************LKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTL***********************VDLRAEIRRQSTMELQIFKKRWNEAIEQDKSWVDPFPR************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEAIEQDKSWVDPFPRKQRRKKERRQDH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	402
449488425	410	PREDICTED: uncharacterized protein LOC10	0.965	0.946	0.720	1e-169
449457799	419	PREDICTED: uncharacterized protein LOC10	0.987	0.947	0.691	1e-168
357446399	403	Lysine ketoglutarate reductase trans-spl	0.977	0.975	0.691	1e-165
356549391	399	PREDICTED: uncharacterized protein LOC10	0.960	0.967	0.686	1e-162
356555066	411	PREDICTED: uncharacterized protein LOC10	0.990	0.968	0.679	1e-161
356519538	397	PREDICTED: uncharacterized protein LOC10	0.947	0.959	0.685	1e-160
224078896	370	predicted protein [Populus trichocarpa]	0.885	0.962	0.741	1e-160
356546282	388	PREDICTED: uncharacterized protein LOC10	0.947	0.981	0.664	1e-155
297843944	436	predicted protein [Arabidopsis lyrata su	0.957	0.883	0.673	1e-155
22329488	438	uncharacterized protein [Arabidopsis tha	0.957	0.878	0.663	1e-152

>gi|449488425|ref|XP_004158032.1| PREDICTED: uncharacterized protein LOC101230572 [Cucumis sativus]

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 281/390 (72%), Positives = 324/390 (83%), Gaps = 2/390 (0%)

Query: 1   MKSIKTWRLL--KRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
           MK +K+W +L  KRN FSD  K+G KMKQL FM ++C+VMLF++YRTT YQY QT++E  
Sbjct: 1   MKPLKSWDILLRKRNLFSDAGKYGFKMKQLPFMGVICSVMLFIIYRTTNYQYLQTKIETA 60

Query: 59  FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
             PFD +K     S  L  LPRGIV+ARSDLELRPLW TSSSR K   YSNRNLLAIP G
Sbjct: 61  LQPFDTAKDYPEESQNLNGLPRGIVEARSDLELRPLWGTSSSRLKGHDYSNRNLLAIPVG 120

Query: 119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
           IKQK+NV++IV+KF+PENFT+ILFHYDG+V+ W  LDW N AIHIA +NQTKWW+AKRFL
Sbjct: 121 IKQKENVNSIVQKFIPENFTIILFHYDGNVDGWWDLDWCNDAIHIAVRNQTKWWYAKRFL 180

Query: 179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
            P VVS YDYIFLWDEDLGVE+F PRRYLEIVKSEG EISQPALDPNST+IHH+ T+RAR
Sbjct: 181 QPAVVSIYDYIFLWDEDLGVEHFSPRRYLEIVKSEGLEISQPALDPNSTDIHHRITVRAR 240

Query: 239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
           TKK HRRVYDLRG+VKC++ SE PPCTGFVEGMAPVFS+SAW+C WHLIQNDLVHGWGMD
Sbjct: 241 TKKIHRRVYDLRGNVKCSDESEEPPCTGFVEGMAPVFSKSAWHCTWHLIQNDLVHGWGMD 300

Query: 299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAE 358
           MKLGYCAQGDRTKNVG+IDS+Y+VH+GIQTLGG     K +K    AK+  P P D+R E
Sbjct: 301 MKLGYCAQGDRTKNVGVIDSQYIVHKGIQTLGGGGTKSKPSKAAGYAKKQNPIPSDVRTE 360

Query: 359 IRRQSTMELQIFKKRWNEAIEQDKSWVDPF 388
           IRRQST ELQIFK+RWN+A+ +D SWVDPF
Sbjct: 361 IRRQSTWELQIFKERWNKAVAEDLSWVDPF 390

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457799|ref|XP_004146635.1| PREDICTED: uncharacterized protein LOC101217607 [Cucumis sativus]

 Score =  595 bits (1535), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 282/408 (69%), Positives = 327/408 (80%), Gaps = 11/408 (2%)

Query: 1   MKSIKTWRLL--KRNSFSDGV---------KFGVKMKQLQFMAIMCTVMLFVVYRTTYYQ 49
           MK +K+W +L  KRN FSD           K+G KMKQL FM ++C+VMLF++YRTT YQ
Sbjct: 1   MKPLKSWDILLRKRNLFSDACPKHTMVVQGKYGFKMKQLPFMGVICSVMLFIIYRTTNYQ 60

Query: 50  YKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSN 109
           Y QT++E    PFD +K     S  L  LPRGIV+ARSDLELRPLW TSSSR K   YSN
Sbjct: 61  YLQTKIETALQPFDTAKDYPEESQNLNGLPRGIVEARSDLELRPLWGTSSSRLKGHDYSN 120

Query: 110 RNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQT 169
           RNLLAIP GIKQK+NV++IV+KF+PENFT+ILFHYDG+V+ W  LDW N AIHIA +NQT
Sbjct: 121 RNLLAIPVGIKQKENVNSIVQKFIPENFTIILFHYDGNVDGWWDLDWCNDAIHIAVRNQT 180

Query: 170 KWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEI 229
           KWW+AKRFL P VVS YDYIFLWDEDLGVE+F PRRYLEIVKSEG EISQPALDPNST+I
Sbjct: 181 KWWYAKRFLQPAVVSIYDYIFLWDEDLGVEHFSPRRYLEIVKSEGLEISQPALDPNSTDI 240

Query: 230 HHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQN 289
           HH+ T+RARTKK HRRVYDLRG+VKC++ SE PPCTGFVEGMAPVFS+SAW+C WHLIQN
Sbjct: 241 HHRITVRARTKKIHRRVYDLRGNVKCSDESEEPPCTGFVEGMAPVFSKSAWHCTWHLIQN 300

Query: 290 DLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHG 349
           DLVHGWGMDMKLGYCAQGDRTKNVG+IDS+Y+VH+GIQTLGG     K +K    AK+  
Sbjct: 301 DLVHGWGMDMKLGYCAQGDRTKNVGVIDSQYIVHKGIQTLGGGGTKSKPSKAAGYAKKQN 360

Query: 350 PAPVDLRAEIRRQSTMELQIFKKRWNEAIEQDKSWVDPFPRKQRRKKE 397
           P P D+R EIRRQST ELQIFK+RWN+A+ +D+SWVDPF     +  E
Sbjct: 361 PIPSDVRTEIRRQSTWELQIFKERWNKAVAEDQSWVDPFKTNSLKSDE 408

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446399|ref|XP_003593477.1| Lysine ketoglutarate reductase trans-splicing-like protein [Medicago truncatula] gi|355482525|gb|AES63728.1| Lysine ketoglutarate reductase trans-splicing-like protein [Medicago truncatula]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 274/396 (69%), Positives = 329/396 (83%), Gaps = 3/396 (0%)

Query: 1   MKSIKTWRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFS 60
           MKS++ W + K++  SDG K   +MKQL FMA++CTVMLF+VYRTT YQY Q E++ K+S
Sbjct: 4   MKSLR-WLMRKKSGLSDGGKSSFRMKQLPFMAVVCTVMLFIVYRTTKYQYHQEEIDKKWS 62

Query: 61  PFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIK 120
            +  ++    +S +LK LPRGI+Q  SDLELRPLW  S+SR K   YSNRNLLAIP GIK
Sbjct: 63  LWGKAEAYLTTSQKLKGLPRGIIQDSSDLELRPLWLRSNSRSKSRDYSNRNLLAIPVGIK 122

Query: 121 QKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHP 180
           QK NV+A+V+KFLPENFT+ILFHYDG+V+ W  LDWS+KAIHI AQNQTKWWFAKRFLHP
Sbjct: 123 QKHNVNAMVQKFLPENFTIILFHYDGNVDGWWNLDWSSKAIHIVAQNQTKWWFAKRFLHP 182

Query: 181 DVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTK 240
           D+VS YDYIFLWDEDLGVE+F P RY++IVK EG EISQPALDPNSTEIHH+ T+RAR K
Sbjct: 183 DIVSIYDYIFLWDEDLGVEHFSPSRYVKIVKEEGLEISQPALDPNSTEIHHRITVRARNK 242

Query: 241 KFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMK 300
           KFHRRVY+ RGS +C++ SEGPPCTGFVEGMAPVFSRSAWYC WHLIQNDLVHGWGMDMK
Sbjct: 243 KFHRRVYERRGSTRCSDASEGPPCTGFVEGMAPVFSRSAWYCTWHLIQNDLVHGWGMDMK 302

Query: 301 LGYCAQGDRTKNVGIIDSEYVVHQGIQTLGG--QPPTRKSTKREELAKRHGPAPVDLRAE 358
           LGYCAQGDRTK VG++DS+YVVH+GIQTLGG     T+ S  ++   ++ G A VD+R+E
Sbjct: 303 LGYCAQGDRTKKVGVVDSQYVVHKGIQTLGGSDHGATKVSKLKKTTTQKQGGATVDVRSE 362

Query: 359 IRRQSTMELQIFKKRWNEAIEQDKSWVDPFPRKQRR 394
           IRRQST EL++FK+RWN+AI +DK+WVDPF R+ R+
Sbjct: 363 IRRQSTWELEVFKERWNQAIAKDKNWVDPFKRRIRK 398

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549391|ref|XP_003543077.1| PREDICTED: uncharacterized protein LOC100776750 [Glycine max]

 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/402 (68%), Positives = 320/402 (79%), Gaps = 16/402 (3%)

Query: 1   MKSIKT--WRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
           M SIK+  W + K++  SDG K   KMKQL F+A++CT+MLF+VYRTT YQY Q E+   
Sbjct: 1   MTSIKSLRWLMRKKSGLSDGGKSSFKMKQLPFLAVLCTIMLFIVYRTTKYQYHQEEVYPS 60

Query: 59  FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
                       +SG+LK LPRGI+   SDLELRPLWS S+SR K  VYSN NLLA+P G
Sbjct: 61  ------------TSGKLKGLPRGIIHDNSDLELRPLWSRSNSRSK-AVYSNSNLLAVPVG 107

Query: 119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
           IKQK NVDA+V+KFL ENFT+ILFHYDG+V+ W  LDWS+KAIHI A+NQTKWWFAKRFL
Sbjct: 108 IKQKQNVDAMVQKFLRENFTIILFHYDGNVDGWWNLDWSSKAIHIVARNQTKWWFAKRFL 167

Query: 179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
           HPD+VS YDYIFLWDEDLGVE+F P RY+EI+K EG EISQPALDPNSTEIHHK TIRAR
Sbjct: 168 HPDIVSIYDYIFLWDEDLGVEHFSPSRYVEIIKREGLEISQPALDPNSTEIHHKITIRAR 227

Query: 239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
           TKKFHRRVY+ RGS +C+++SEGPPCTGFVEGMAPVFSRSAWYC WHLIQNDLVHGWG+D
Sbjct: 228 TKKFHRRVYERRGSTRCSDLSEGPPCTGFVEGMAPVFSRSAWYCTWHLIQNDLVHGWGVD 287

Query: 299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPP-TRKSTKREELAKRHGPAPVDLRA 357
           MKLGYCAQGDRTK VG++DSEYV HQGIQTLGG      K +K +    + G   +D+R 
Sbjct: 288 MKLGYCAQGDRTKKVGVVDSEYVFHQGIQTLGGSGHRMTKVSKPQRTTMKQGGVGIDVRT 347

Query: 358 EIRRQSTMELQIFKKRWNEAIEQDKSWVDPFPRKQRRKKERR 399
           EIRRQST E +IFK+RWNEAI  DK+WVDPF   QRR ++RR
Sbjct: 348 EIRRQSTWEFEIFKERWNEAIAADKNWVDPFKSDQRRIRKRR 389

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555066|ref|XP_003545860.1| PREDICTED: uncharacterized protein LOC100778191 [Glycine max]

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 273/402 (67%), Positives = 323/402 (80%), Gaps = 4/402 (0%)

Query: 1   MKSIKT--WRLLKRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
           M SIK+  W + K++  SDG K   KMK L F+A++CT+MLF+VYRTT YQY Q E++ K
Sbjct: 1   MTSIKSLRWLMRKKSGLSDGGKSSFKMKHLPFLAVLCTIMLFIVYRTTKYQYHQEEIDKK 60

Query: 59  FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
           +S +   K    + G+LK LPRGI+   SDLELRPLWS SSSR K  VYSN NLLA+P G
Sbjct: 61  WSFWGQPKVYPSTYGKLKGLPRGIIHDNSDLELRPLWSRSSSRSK-AVYSNSNLLAVPVG 119

Query: 119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
           IKQK NVDA+V+KFL ENFT+ILFHYDG+V+ W  LDWS+KAIHI A+NQTKWWFAKRFL
Sbjct: 120 IKQKQNVDAMVQKFLQENFTIILFHYDGNVDGWWNLDWSSKAIHIIARNQTKWWFAKRFL 179

Query: 179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
           HPD+VS YDYIFLWDEDLGVE+F P RY+EI+K EG EISQPALDPNSTEIHH+ TIRAR
Sbjct: 180 HPDIVSIYDYIFLWDEDLGVEHFSPSRYVEIIKREGLEISQPALDPNSTEIHHRITIRAR 239

Query: 239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
           TKKFHRRVY+ RGS +C+++SEGPPCTGFVEGMAPVFS+SAWYC WHLIQNDLVHGWG+D
Sbjct: 240 TKKFHRRVYERRGSTRCSDLSEGPPCTGFVEGMAPVFSQSAWYCTWHLIQNDLVHGWGVD 299

Query: 299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPP-TRKSTKREELAKRHGPAPVDLRA 357
           MKLGYCAQGDRTK VG++DSEYV H+GIQTLGG      K +K +    + G   +D+R 
Sbjct: 300 MKLGYCAQGDRTKKVGVVDSEYVFHKGIQTLGGSGHRMTKVSKLQRTTMKQGGVGIDVRT 359

Query: 358 EIRRQSTMELQIFKKRWNEAIEQDKSWVDPFPRKQRRKKERR 399
           EIRRQST E +IFK+RWN+AI  DK+WVDPF   QRR ++ R
Sbjct: 360 EIRRQSTWEFEIFKERWNKAIGADKNWVDPFKSDQRRIRKWR 401

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519538|ref|XP_003528429.1| PREDICTED: uncharacterized protein LOC100792028 [Glycine max]

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 261/381 (68%), Positives = 313/381 (82%)

Query: 20  KFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLP 79
           K  +KMKQL FMA++C VMLFVVYRT  YQ  Q E++ +++  +  K S  +SG LK LP
Sbjct: 12  KSSLKMKQLPFMAVVCIVMLFVVYRTLKYQSYQEEIDKQWNFREDEKASSETSGNLKGLP 71

Query: 80  RGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTV 139
           RGI+QA SD ELRPLWS SS R K  VYSNRNLLA+P GIKQK NVDA+V+KFLP+NFT+
Sbjct: 72  RGIIQATSDFELRPLWSPSSLRSKVSVYSNRNLLAVPVGIKQKHNVDAMVQKFLPDNFTI 131

Query: 140 ILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVE 199
           ILFHYD +++ W  L+W++KAIHI AQNQTKWWFAKRFLHPD+VS YDYIFLWDEDLGVE
Sbjct: 132 ILFHYDANMDGWWDLNWTSKAIHITAQNQTKWWFAKRFLHPDIVSIYDYIFLWDEDLGVE 191

Query: 200 NFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNIS 259
           +F P RY+EIVK EG EISQPALDPNSTEIHH+ T+RARTKK HRRVY+LRGS +C+  S
Sbjct: 192 HFSPSRYIEIVKEEGLEISQPALDPNSTEIHHRITVRARTKKVHRRVYELRGSTRCSEAS 251

Query: 260 EGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSE 319
           +GPPCTGFVEGMAPVFSRSAWYC WHLIQNDLVHGWG+D+K+GYCAQGDRT+NVG++DSE
Sbjct: 252 KGPPCTGFVEGMAPVFSRSAWYCTWHLIQNDLVHGWGVDIKIGYCAQGDRTQNVGVVDSE 311

Query: 320 YVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEAIE 379
           YVVH+ IQTLGG     K + R+    +HG A  D R EIRRQST EL++FK+RWN AI 
Sbjct: 312 YVVHKAIQTLGGSDDPTKVSNRQRTTPKHGVAAFDQRVEIRRQSTWELEVFKERWNRAIA 371

Query: 380 QDKSWVDPFPRKQRRKKERRQ 400
           +DK+WV+PF   ++R ++RR+
Sbjct: 372 EDKNWVNPFKSDKKRTRQRRK 392

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078896|ref|XP_002305670.1| predicted protein [Populus trichocarpa] gi|222848634|gb|EEE86181.1| predicted protein [Populus trichocarpa]

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 270/364 (74%), Positives = 304/364 (83%), Gaps = 8/364 (2%)

Query: 25  MKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLPRGIVQ 84
           MK L FM ++CT MLFVVYRTT YQY  TEM+ K  PF+I K S  +SG L  LP GI++
Sbjct: 1   MKLLPFMGVLCTAMLFVVYRTTIYQYHHTEMDEKLYPFEILKESALASGLLGGLPHGIIR 60

Query: 85  ARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHY 144
           A SDLEL+PLWSTSSSR K    +   LLAIP GIKQKDNVD IV+KFLPENFTVILFHY
Sbjct: 61  ASSDLELKPLWSTSSSRSKVDPSTRHYLLAIPVGIKQKDNVDHIVQKFLPENFTVILFHY 120

Query: 145 DGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPR 204
           DG+V+ W  LDWSN+AIHI A+NQTKWWFAKRFLHP VVS YDYIFLWDEDLG+E+F+P 
Sbjct: 121 DGNVDGWWDLDWSNEAIHIVAKNQTKWWFAKRFLHPAVVSAYDYIFLWDEDLGIEHFNPG 180

Query: 205 RYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPC 264
           +YL+IV+ EG EISQPALDPNST+IHH+ TIRAR KKFHRRVYD RGS KC++ISEGPPC
Sbjct: 181 KYLKIVRFEGLEISQPALDPNSTDIHHRITIRARMKKFHRRVYDSRGSTKCSDISEGPPC 240

Query: 265 TGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ 324
           TGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTK VG+IDSEY+VH+
Sbjct: 241 TGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKKVGVIDSEYIVHK 300

Query: 325 GIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEAIEQDKSW 384
           GIQTLGG    RK+ +R    KRH  A VD R EIRRQST ELQIFK RW +A+++DK+W
Sbjct: 301 GIQTLGG----RKTPRR----KRHSAASVDPRMEIRRQSTWELQIFKDRWKQAVKEDKNW 352

Query: 385 VDPF 388
           VDPF
Sbjct: 353 VDPF 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546282|ref|XP_003541558.1| PREDICTED: uncharacterized protein LOC100807744 [Glycine max]

 Score =  553 bits (1425), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 253/381 (66%), Positives = 309/381 (81%)

Query: 20  KFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKSLP 79
           K  +KM QL FMA++C VMLFVVYRT  YQ  Q +++ +++  +  K    +SG LK LP
Sbjct: 3   KSSLKMTQLPFMAVVCIVMLFVVYRTLKYQSYQEQIDKQWNIREEEKAYTETSGNLKGLP 62

Query: 80  RGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTV 139
           +GI+QA SDLELR LWS S+ R K  VYSNRNLLA+  GIKQK NVD +V+KFLP+NFT+
Sbjct: 63  QGIIQATSDLELRRLWSPSNLRSKASVYSNRNLLAVAVGIKQKHNVDVMVQKFLPDNFTI 122

Query: 140 ILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVE 199
           ILFHYD +++ W  L WS+KAIHI AQNQTKWWFAKRFLHPD+VS YDYIFLWDEDLGVE
Sbjct: 123 ILFHYDANLDGWWDLSWSSKAIHITAQNQTKWWFAKRFLHPDIVSIYDYIFLWDEDLGVE 182

Query: 200 NFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNIS 259
           +F P RY+EIVK EG EISQPALDPNSTEIHH+ T+RARTKK HRRVY+LRG+ KC++ S
Sbjct: 183 HFSPSRYIEIVKEEGLEISQPALDPNSTEIHHRITVRARTKKVHRRVYELRGNTKCSDAS 242

Query: 260 EGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSE 319
           +GPPCTGFVEGMAPVFSRSAWYC WHLIQNDLVHGWG+DMK+GYCAQG+RT+NVG++DSE
Sbjct: 243 KGPPCTGFVEGMAPVFSRSAWYCTWHLIQNDLVHGWGLDMKVGYCAQGERTQNVGVVDSE 302

Query: 320 YVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEAIE 379
           +VVH+GIQTLGG     K + ++    RHG A  D R EIRRQST EL++F +RWN AI 
Sbjct: 303 FVVHKGIQTLGGSDDPTKVSSQKRKTPRHGAAAFDQRVEIRRQSTWELEVFNERWNRAIA 362

Query: 380 QDKSWVDPFPRKQRRKKERRQ 400
           +DK+WV+PF   ++R ++R++
Sbjct: 363 EDKNWVNPFKSDKKRIRQRQK 383

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843944|ref|XP_002889853.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335695|gb|EFH66112.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/389 (67%), Positives = 311/389 (79%), Gaps = 4/389 (1%)

Query: 1   MKSIKTWRLL--KRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
           MKSIK+ + L  K+ +  +  K G KMK   F+A+MCT +L   Y+TT  Q++QTE+E  
Sbjct: 8   MKSIKSLKSLVRKKTNAQEVSKSGWKMKP--FLALMCTALLIFWYKTTNIQFEQTEIEET 65

Query: 59  FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
             PFD++K S   + +LK LP GI+Q RSDLEL+PLWS SS R K    +NRNLLAIP G
Sbjct: 66  DYPFDMAKESETVNDKLKVLPHGIIQPRSDLELKPLWSRSSLRSKGVEMTNRNLLAIPVG 125

Query: 119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
           IKQK NVDA+V+KFLP NFT++LFHYDG+++ W  LDWS+KAIHI AQNQTKWWFAKRFL
Sbjct: 126 IKQKGNVDALVKKFLPANFTIVLFHYDGNMDKWWDLDWSSKAIHIVAQNQTKWWFAKRFL 185

Query: 179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
           HPDVVS YDYIFLWDEDLGVENF+P RYL IVKS G EISQPALD NSTEIHHK T+R+R
Sbjct: 186 HPDVVSIYDYIFLWDEDLGVENFNPERYLRIVKSVGLEISQPALDHNSTEIHHKITLRSR 245

Query: 239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
           TKKFHRRVY  RG  +C+N S  PPCTGFVEGMAPVFS++AW+C W+LIQNDLVHGWGMD
Sbjct: 246 TKKFHRRVYINRGHKRCSNTSADPPCTGFVEGMAPVFSKAAWFCTWNLIQNDLVHGWGMD 305

Query: 299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAE 358
           MKLGYCAQGDRTKNVGI+DSEY+VHQGIQTLG   P +K+T R+   +RHG    D R E
Sbjct: 306 MKLGYCAQGDRTKNVGIVDSEYIVHQGIQTLGESVPEKKTTARDVRPRRHGHTTFDSRTE 365

Query: 359 IRRQSTMELQIFKKRWNEAIEQDKSWVDP 387
           IRRQST ELQ FK+RW++A+E+D +W+DP
Sbjct: 366 IRRQSTWELQTFKERWSKAVEEDNNWIDP 394

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22329488|ref|NP_172583.2| uncharacterized protein [Arabidopsis thaliana] gi|18700105|gb|AAL77664.1| At1g11170/T28P6_16 [Arabidopsis thaliana] gi|21700791|gb|AAM70519.1| At1g11170/T28P6_16 [Arabidopsis thaliana] gi|332190572|gb|AEE28693.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 258/389 (66%), Positives = 311/389 (79%), Gaps = 4/389 (1%)

Query: 1   MKSIKTWR-LLKRNSFSDGV-KFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
           MKSIK+ + L+KR + +  V K G KMK   F+A+MCT +L   Y+TT  Q++QTE+E  
Sbjct: 8   MKSIKSLKSLVKRKTNAQEVSKSGWKMKP--FLALMCTALLIFWYKTTNIQFEQTEIEET 65

Query: 59  FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
             PFD++K S   + +LK LPRGI+Q+RSDLEL+PLWS  S R K    +NRNLLAIP G
Sbjct: 66  DYPFDMAKESEAVNDKLKGLPRGIIQSRSDLELKPLWSRGSLRSKGVEMTNRNLLAIPVG 125

Query: 119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
           +KQK NVDA+V+KFLP NFT++LFHYDG+++ W  L+WS+K+IHI AQNQTKWWFAKRFL
Sbjct: 126 LKQKGNVDALVKKFLPANFTIVLFHYDGNMDKWWDLEWSSKSIHIVAQNQTKWWFAKRFL 185

Query: 179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
           HPDVVS YDYIFLWDEDLGVENF+P RYL+IVKS G EISQPALD NSTEIHHK T+R++
Sbjct: 186 HPDVVSIYDYIFLWDEDLGVENFNPERYLKIVKSVGLEISQPALDHNSTEIHHKITLRSK 245

Query: 239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
           TKKFHRRVY  RG  +C+N S  PPCTGFVEGMAPVFS++AW C W+LIQNDLVHGWGMD
Sbjct: 246 TKKFHRRVYINRGHKRCSNTSSDPPCTGFVEGMAPVFSKAAWLCTWNLIQNDLVHGWGMD 305

Query: 299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAE 358
           MKLGYCAQGDRTKNVGI+DSEY++HQGIQTLG   P +K T R+   +R G    D R E
Sbjct: 306 MKLGYCAQGDRTKNVGIVDSEYILHQGIQTLGESVPEKKKTARDVGTRRQGHTTFDSRTE 365

Query: 359 IRRQSTMELQIFKKRWNEAIEQDKSWVDP 387
           IRRQST ELQ FK+RW++A+E+D  W+DP
Sbjct: 366 IRRQSTWELQTFKERWSKAVEEDIKWIDP 394

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	402
TAIR|locus:2008425	425	AT1G61240 [Arabidopsis thalian	0.955	0.903	0.660	1.7e-144
TAIR|locus:2202124	438	AT1G11170 [Arabidopsis thalian	0.957	0.878	0.663	2.9e-142
TAIR|locus:2124608	389	AT4G18530 "AT4G18530" [Arabido	0.773	0.799	0.523	6.8e-95
TAIR|locus:2008640	404	AT1G67850 "AT1G67850" [Arabido	0.656	0.653	0.492	4.5e-66
TAIR|locus:504956279	381	AT1G24570 [Arabidopsis thalian	0.644	0.679	0.481	2e-65
TAIR|locus:2205140	382	AT1G08040 [Arabidopsis thalian	0.609	0.641	0.496	4.1e-65
TAIR|locus:2079291	396	AT3G26440 [Arabidopsis thalian	0.763	0.775	0.416	4.1e-65
TAIR|locus:2057557	374	AT2G28310 "AT2G28310" [Arabido	0.609	0.655	0.476	6e-64
TAIR|locus:2086721	398	AT3G27470 "AT3G27470" [Arabido	0.624	0.630	0.454	6e-64
TAIR|locus:2031905	401	AT1G13000 [Arabidopsis thalian	0.611	0.613	0.466	2.6e-63

TAIR|locus:2008425 AT1G61240 [Arabidopsis thaliana (taxid:3702)]

 Score = 1412 (502.1 bits), Expect = 1.7e-144, P = 1.7e-144
 Identities = 257/389 (66%), Positives = 316/389 (81%)

Query:     1 MKSIKTWRLL--KRNSFSDGVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
             + SIK+W+ L  +RN+  +G K   KMK +  + +MCTV+L   Y+TT  QY+QTE+E  
Sbjct:     5 LPSIKSWKSLVKRRNNAQEGGKSSWKMKPV--VVLMCTVLLIFWYKTTNIQYEQTEIEET 62

Query:    59 FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
               PF+++K S   S +LK LP GI+Q +SDLEL+PLWS+SS R K G  +NRNLLA+P G
Sbjct:    63 DYPFEMAKESEPVSEKLKGLPFGIMQPKSDLELKPLWSSSSLRSKSGELTNRNLLAMPVG 122

Query:   119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
             +KQKDNVDA+V+KFLP NFTVILFHYDG+++ W  L+WS+KAIHI A NQTKWWFAKRFL
Sbjct:   123 LKQKDNVDAVVKKFLPANFTVILFHYDGNMDQWWDLEWSSKAIHIVAHNQTKWWFAKRFL 182

Query:   179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
             HPD+VS YDY+FLWDEDLGVENF+P++YL IVK+ G EISQPAL PNSTE+HH+ T+R+R
Sbjct:   183 HPDIVSIYDYVFLWDEDLGVENFNPQKYLRIVKTAGLEISQPALHPNSTEVHHRITVRSR 242

Query:   239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
             TK FHRRVYD RG++KC+N SEGPPCTGFVEGMAPVFSRSAW+C W+LIQNDLVHGWGMD
Sbjct:   243 TKIFHRRVYDSRGNMKCSNASEGPPCTGFVEGMAPVFSRSAWFCTWNLIQNDLVHGWGMD 302

Query:   299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQP-PTRKSTKREELAKRHGPAPVDLRA 357
             MKLGYCAQGDR+K VGI+DSEY+ HQGIQTLGG   P +K++ R  + +R G A  D R 
Sbjct:   303 MKLGYCAQGDRSKKVGIVDSEYIFHQGIQTLGGSGYPDKKNSARSGVNRRRGSATFDSRT 362

Query:   358 EIRRQSTMELQIFKKRWNEAIEQDKSWVD 386
             EIRRQST ELQ FK+RWN+A+ +DK WV+
Sbjct:   363 EIRRQSTWELQAFKERWNQAVAEDKYWVE 391

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202124 AT1G11170 [Arabidopsis thaliana (taxid:3702)]

 Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
 Identities = 258/389 (66%), Positives = 311/389 (79%)

Query:     1 MKSIKTWR-LLKRNSFSDGV-KFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAK 58
             MKSIK+ + L+KR + +  V K G KMK   F+A+MCT +L   Y+TT  Q++QTE+E  
Sbjct:     8 MKSIKSLKSLVKRKTNAQEVSKSGWKMKP--FLALMCTALLIFWYKTTNIQFEQTEIEET 65

Query:    59 FSPFDISKGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
               PFD++K S   + +LK LPRGI+Q+RSDLEL+PLWS  S R K    +NRNLLAIP G
Sbjct:    66 DYPFDMAKESEAVNDKLKGLPRGIIQSRSDLELKPLWSRGSLRSKGVEMTNRNLLAIPVG 125

Query:   119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
             +KQK NVDA+V+KFLP NFT++LFHYDG+++ W  L+WS+K+IHI AQNQTKWWFAKRFL
Sbjct:   126 LKQKGNVDALVKKFLPANFTIVLFHYDGNMDKWWDLEWSSKSIHIVAQNQTKWWFAKRFL 185

Query:   179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
             HPDVVS YDYIFLWDEDLGVENF+P RYL+IVKS G EISQPALD NSTEIHHK T+R++
Sbjct:   186 HPDVVSIYDYIFLWDEDLGVENFNPERYLKIVKSVGLEISQPALDHNSTEIHHKITLRSK 245

Query:   239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
             TKKFHRRVY  RG  +C+N S  PPCTGFVEGMAPVFS++AW C W+LIQNDLVHGWGMD
Sbjct:   246 TKKFHRRVYINRGHKRCSNTSSDPPCTGFVEGMAPVFSKAAWLCTWNLIQNDLVHGWGMD 305

Query:   299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAE 358
             MKLGYCAQGDRTKNVGI+DSEY++HQGIQTLG   P +K T R+   +R G    D R E
Sbjct:   306 MKLGYCAQGDRTKNVGIVDSEYILHQGIQTLGESVPEKKKTARDVGTRRQGHTTFDSRTE 365

Query:   359 IRRQSTMELQIFKKRWNEAIEQDKSWVDP 387
             IRRQST ELQ FK+RW++A+E+D  W+DP
Sbjct:   366 IRRQSTWELQTFKERWSKAVEEDIKWIDP 394

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2124608 AT4G18530 "AT4G18530" [Arabidopsis thaliana (taxid:3702)]

 Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
 Identities = 166/317 (52%), Positives = 231/317 (72%)

Query:    76 KSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPE 135
             ++LP+GI++  S+LE + LW+   ++K+   +S  +LLA+  GIKQK+ V+ +++KF P 
Sbjct:    75 EALPQGIIEKTSNLETQHLWNYDDTKKRRPNHS-MSLLAMAVGIKQKELVNKVIQKFPPR 133

Query:   136 NFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDED 195
             +F V+LFHYDG V+ W+   W+N AIH++  NQTKWWFAKRFLHPD+V+ Y+YIFLWDED
Sbjct:   134 DFAVMLFHYDGVVDDWKQYPWNNHAIHVSVMNQTKWWFAKRFLHPDIVAEYEYIFLWDED 193

Query:   196 LGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKC 255
             LGV +F+P+RYL IVK EG EISQPALD + +E+HH  T R +  K HRR+Y  +GS +C
Sbjct:   194 LGVGHFNPQRYLSIVKEEGLEISQPALDTSKSEVHHPITARRKKSKVHRRMYKYKGSGRC 253

Query:   256 TNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGI 315
              + S  PPC G+VE MAPVFSR+AW C+W++IQNDL+H WG+D +LGYCAQGDR KNVG+
Sbjct:   254 DDHSTNPPCIGWVEMMAPVFSRAAWRCSWYMIQNDLIHAWGLDTQLGYCAQGDRKKNVGV 313

Query:   316 IDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPA----PVDLRAEIRRQSTMELQIFK 371
             +D+EY++H G+ TLG    T  S  R E   +   +     VD R E+R +S +E++ FK
Sbjct:   314 VDAEYIIHYGLPTLG-VVETASSALRNETDSKSTESLESREVDNRPEVRMKSFVEMKRFK 372

Query:   372 KRWNEAIEQDKSWVDPF 388
             +RW +A+  D  WVDP+
Sbjct:   373 ERWKKAVRDDTCWVDPY 389

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2008640 AT1G67850 "AT1G67850" [Arabidopsis thaliana (taxid:3702)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 135/274 (49%), Positives = 173/274 (63%)

Query:    60 SPFDISKGSRFSSGR-LKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAG 118
             +P D SK    S+ R  + LP G+V A SD  LR LW       K      R L     G
Sbjct:    88 TPIDKSKIWVPSNPRGAEMLPPGMVAAESDFYLRRLWGLPHEDLKS---EPRYLATFTVG 144

Query:   119 IKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFL 178
             I QK N+DA V+KF  ENFT++LFHYDG V  W   +WS  AIHI+ + QTKWW+AKRFL
Sbjct:   145 INQKANIDACVKKF-SENFTIVLFHYDGRVTEWDEFEWSKTAIHISVRKQTKWWYAKRFL 203

Query:   179 HPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRAR 238
             HPD+V+ YDYIF+WDEDLGVE+F+   Y+++VK  G EISQP L+PN   +  + T R  
Sbjct:   204 HPDIVARYDYIFVWDEDLGVEHFNAEEYVKMVKKHGLEISQPGLEPNQG-LTWQMTKRRG 262

Query:   239 TKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD 298
               + H+   +  G   C++    PPC  FVE MAPVFSR+AW C WH+IQNDLVHGWG+D
Sbjct:   263 DMEVHKITEERPGW--CSD-PHLPPCAAFVEIMAPVFSRNAWRCVWHVIQNDLVHGWGLD 319

Query:   299 MKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGGQ 332
               L  C +    K +G++DS++VVHQ   +LG Q
Sbjct:   320 FALRRCVEPAHEK-IGVVDSQWVVHQSFPSLGNQ 352

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956279 AT1G24570 [Arabidopsis thaliana (taxid:3702)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 129/268 (48%), Positives = 164/268 (61%)

Query:    66 KGSRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNV 125
             K    S    + LP GI+ + SDL LR LW          V   R L     G  Q+ N+
Sbjct:    71 KAIDISKACAERLPSGIIASESDLYLRRLWGNPDEDL---VKQPRYLATFTVGYNQRHNI 127

Query:   126 DAIVRKFLPENFTVILFHYDGDVNAWRG-LDWSNKAIHIAAQNQTKWWFAKRFLHPDVVS 184
             DA V KF  ENFT++LFHYDG  +AW    +WS  AIHI+ + QTKWW+AKRFLHPD+V+
Sbjct:   128 DACVSKF-SENFTIVLFHYDGVTSAWNDEFEWSRNAIHISVKKQTKWWYAKRFLHPDIVA 186

Query:   185 NYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHR 244
              YDYIF+WDEDLGV++F+   Y+ IVK    EISQP LDP  T  + + T R    + H+
Sbjct:   187 RYDYIFIWDEDLGVDHFNAEEYIHIVKKHDLEISQPGLDPE-TGFNWQITKRREHSEVHK 245

Query:   245 RVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYC 304
                +      C+N    PPC  FVE MAPVFSR AW C WH+IQNDLVHGWG+D  L  C
Sbjct:   246 ETDEKLDW--CSNPPR-PPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRC 302

Query:   305 AQGDRTKNVGIIDSEYVVHQGIQTLGGQ 332
              +    + +GI+DS+++VHQ I +LG Q
Sbjct:   303 VEEPAFEKIGIVDSQWIVHQFIPSLGNQ 330

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2205140 AT1G08040 [Arabidopsis thaliana (taxid:3702)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 127/256 (49%), Positives = 169/256 (66%)

Query:    78 LPRGIVQARSDLELRPLWST-SSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPEN 136
             LP GI+ A +D  LR LW   S   KK   Y    L+    G +Q++N++A V+KF  E+
Sbjct:    94 LPPGIIVAETDFYLRRLWGEPSEDLKKKPKY----LVTFTVGFEQRNNINAAVKKF-SED 148

Query:   137 FTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDL 196
             F ++LFHYDG    W   +WS  AIHI+A+ QTKWW+AKRFLHPDVVS Y+YIF+WDEDL
Sbjct:   149 FQILLFHYDGRTTEWDQFEWSKNAIHISAKKQTKWWYAKRFLHPDVVSAYEYIFIWDEDL 208

Query:   197 GVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCT 256
             GVE+F+  RY+E+VK  G EISQP L+PN+  +  + T R   +  H+   +  G   C+
Sbjct:   209 GVEHFNADRYVELVKKHGLEISQPGLEPNNG-LTWEMTKRRGDRDVHKETKEKPGW--CS 265

Query:   257 NISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGII 316
             +    PPC  FVE MAPVFSR AW C WH+IQNDLVHGWG+D  L  C +    K +G++
Sbjct:   266 D-PHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGVV 323

Query:   317 DSEYVVHQGIQTLGGQ 332
             DS++++HQ I +LG Q
Sbjct:   324 DSQWIIHQVIPSLGSQ 339

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2079291 AT3G26440 [Arabidopsis thaliana (taxid:3702)]

 Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
 Identities = 134/322 (41%), Positives = 186/322 (57%)

Query:    18 GVKFGVKMKQLQFMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRFSSGRLKS 77
             G   G+    L    +     +     T Y + ++ E  +K S  + S  S      + S
Sbjct:    34 GFLLGISFPTLSLTKMNFPSSILPSVATVYIENEKPEKSSKTSSQNESDASHHHKIWVPS 93

Query:    78 LPRG-------IVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVR 130
              PRG        V A SD  LR LW     +    V   + L+A     +Q+ N+DA V+
Sbjct:    94 NPRGAEMLPPSFVAAESDFYLRRLWGLP--KDDLPVVKPKYLVAFTVSYEQRKNIDACVK 151

Query:   131 KFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIF 190
             KF  +NFT++LFHYDG  + +   +WS +AIH++   QTKWW+AKRFLHPD+++ Y+YIF
Sbjct:   152 KF-SDNFTIVLFHYDGKTSEYDEFEWSKRAIHVSVPKQTKWWYAKRFLHPDIIAPYEYIF 210

Query:   191 LWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLR 250
             +WDEDLGVENFD   Y++IV   G EISQPA++   + I  K T R    + H+ V +  
Sbjct:   211 IWDEDLGVENFDAEEYIKIVNKHGLEISQPAVESRKS-ITWKITKRIPGIEVHKEVEEKP 269

Query:   251 GSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRT 310
             G  +C N    PPC GF+E MAPVFSR AW C WH+IQNDLVHGWG+D  L  C +    
Sbjct:   270 G--RC-NDPHLPPCAGFIEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHE 326

Query:   311 KNVGIIDSEYVVHQGIQTLGGQ 332
             K +G++DS++++HQ I +LG Q
Sbjct:   327 K-IGVVDSQWIIHQKIPSLGSQ 347

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2057557 AT2G28310 "AT2G28310" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 122/256 (47%), Positives = 170/256 (66%)

Query:    78 LPRGIVQARSDLELRPLWST-SSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPEN 136
             LP GIV A++D  LR LW   +   KK   Y    L+    G +Q+++++ +V+KF  E+
Sbjct:    87 LPPGIVVAKTDFYLRRLWGEPNEDLKKKPKY----LVTFTVGFEQRNHINGVVKKF-SED 141

Query:   137 FTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDL 196
             F ++LFHYDG    W   +WS  AIHI+ + QTKWW+AKRFLHPDVVS Y+YIF+WDEDL
Sbjct:   142 FQILLFHYDGRTTEWDQFEWSKSAIHISTRKQTKWWYAKRFLHPDVVSAYEYIFIWDEDL 201

Query:   197 GVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCT 256
             GVE+F+  +Y+E+VK  G EISQP L+PN+  +  + T R   ++ H+   +  G  K  
Sbjct:   202 GVEHFNADKYIELVKKHGLEISQPGLEPNNG-LTWEMTKRRGDREVHKDTKEKPGWCKDP 260

Query:   257 NISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGII 316
             ++   PPC  FVE MAPVFSR AW C WH+IQNDLVHGWG+D  L  C +    K +G++
Sbjct:   261 HL---PPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRRCVEPAHEK-IGVV 316

Query:   317 DSEYVVHQGIQTLGGQ 332
             DS++++H+ I +LG Q
Sbjct:   317 DSQWIIHKVIPSLGSQ 332

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2086721 AT3G27470 "AT3G27470" [Arabidopsis thaliana (taxid:3702)]

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 119/262 (45%), Positives = 167/262 (63%)

Query:    78 LPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENF 137
             LP  IV   SD  LR LW   +          R L+    G  Q+ N+D +++KF  +NF
Sbjct:   103 LPPDIVTPESDFYLRRLWGDPNEDL---TVKQRYLVTFTVGYDQRKNIDTVLKKF-SDNF 158

Query:   138 TVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLG 197
             +++LFHYDG  + W   +WS +AIH++ + QTKWW+AKRFLHPD+V+ Y+YIF+WDEDLG
Sbjct:   159 SIMLFHYDGRASEWEEFEWSKRAIHVSIRKQTKWWYAKRFLHPDIVAPYEYIFIWDEDLG 218

Query:   198 VENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN 257
             VE+FD  +YL +VK  G EISQP L+P    +  + T +    + H+   +  G   CT+
Sbjct:   219 VEHFDSEKYLAVVKKHGLEISQPGLEPYEG-LTWEMTKKRDDTEVHKHAEERNGW--CTD 275

Query:   258 ISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIID 317
              +  PPC  FVE MAPVFSR AW C WH+IQNDL+HGWG+D  +  C Q    K +G++D
Sbjct:   276 PNL-PPCAAFVEIMAPVFSRKAWRCVWHMIQNDLIHGWGLDFAVRKCVQNAHEK-IGVVD 333

Query:   318 SEYVVHQGIQTLG--GQPPTRK 337
             +++++HQG+ +LG  GQP   K
Sbjct:   334 AQWIIHQGVPSLGNQGQPEQGK 355

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2031905 AT1G13000 [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 119/255 (46%), Positives = 162/255 (63%)

Query:    78 LPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENF 137
             L  GI+   SD  LR LW              + L+A   G  QK NVDA V+KF  ++F
Sbjct:   111 LTPGIIAPESDYYLRRLWGLPEEDVPV---KPKYLIAFTVGFGQKVNVDACVKKF-SKDF 166

Query:   138 TVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLG 197
             T++LFHYDG    W  L+WS +AIH++   QTKWW+AKRFLHPD+V+ YDY+F+WDEDLG
Sbjct:   167 TIVLFHYDGRTTEWEELEWSKRAIHVSVPKQTKWWYAKRFLHPDIVAPYDYVFIWDEDLG 226

Query:   198 VENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN 257
             +ENFD   Y+ ++K  G EISQPA++ +  +I  + T R    + H+   +  G  +C N
Sbjct:   227 LENFDVEEYIRLIKKHGLEISQPAVE-SKKKITWEITKRKTKGEVHKDAKEKPG--RC-N 282

Query:   258 ISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIID 317
                 PPC  F+E MAPVFSR AW C WH+IQNDLVHGWG+D  L  C +    K +G++D
Sbjct:   283 DPHLPPCAAFIEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEK-IGVVD 341

Query:   318 SEYVVHQGIQTLGGQ 332
             S++++HQ + +LG Q
Sbjct:   342 SQWIIHQSLPSLGSQ 356


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.136   0.431    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      402       391   0.00094  117 3  11 22  0.36    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  626 (67 KB)
  Total size of DFA:  288 KB (2148 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.76u 0.11s 30.87t   Elapsed:  00:00:02
  Total cpu time:  30.76u 0.11s 30.87t   Elapsed:  00:00:02
  Start:  Mon May 20 18:11:33 2013   End:  Mon May 20 18:11:35 2013

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	402
pfam05212	294	pfam05212, DUF707, Protein of unknown function (DU	1e-139

>gnl|CDD|218501 pfam05212, DUF707, Protein of unknown function (DUF707)

 Score =  399 bits (1026), Expect = e-139
 Identities = 145/304 (47%), Positives = 185/304 (60%), Gaps = 22/304 (7%)

Query: 78  LPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENF 137
           LP GIV + SD  LR LW +            + LLA   G  QK NVDA V+KF  +NF
Sbjct: 13  LPPGIVVSESDFYLRRLWGSPEEDVASK---PKYLLAFTVGYSQKANVDACVKKF-SDNF 68

Query: 138 TVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLG 197
           T++LFHYDG    W  L+WS KAIH++A+ QTKWWFAKRFLHPD+V+ Y+YIFLWDEDLG
Sbjct: 69  TIVLFHYDGRTTEWDELEWSKKAIHVSAKKQTKWWFAKRFLHPDIVAPYEYIFLWDEDLG 128

Query: 198 VENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN 257
           V+NFD   Y++IVK  G EISQP LDP+  +I  + T R    + H+   +        +
Sbjct: 129 VDNFDAEEYIKIVKKHGLEISQPGLDPDRGQITWRITKRRGDGEVHKDTREKGRCC---D 185

Query: 258 ISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIID 317
            S GPPCTGFVE MAPVFSR AW C WH+IQNDLVHGWG+D  L  C      + +G++D
Sbjct: 186 NSTGPPCTGFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRRCV-EPAHEKIGVVD 244

Query: 318 SEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEA 377
           S++VVHQGI +LG Q      T     A   G         +R +   E  +F++RW  A
Sbjct: 245 SQWVVHQGIPSLGSQ-----GTAENGKAPWQG---------VRDRCKAEWTMFQRRWAAA 290

Query: 378 IEQD 381
            ++ 
Sbjct: 291 EKEY 294

This family consists of several uncharacterized proteins from Arabidopsis thaliana. Length = 294

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	402
PF05212	294	DUF707: Protein of unknown function (DUF707); Inte	100.0
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	93.41
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	92.57
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	91.14
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	90.67
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	84.91
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	82.64
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	82.38

>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana

Probab=100.00  E-value=4.3e-125  Score=911.45  Aligned_cols=291  Identities=60%  Similarity=1.129  Sum_probs=278.1

Q ss_pred             cccCCCCCCCCCCCccccCCCcccccCCCCCCcCccCCCCCCceEEEEeccCcccccHHHHHhhcCCCCcEEEEEEeCCC
Q 015715           68 SRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGD  147 (402)
Q Consensus        68 ~~~~~~g~e~LP~giv~~~sd~~lr~Lwg~p~~~~~~~~~~~k~Lva~~VG~kqk~~Vd~~v~kf~~~nFdv~LFhYDg~  147 (402)
                      .+++|+|+|+||+|||+++|||+||||||.|+++.   +.++|||||||||+|||++||++|+|| ++|||||||||||+
T Consensus         3 ~~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~---~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~nF~i~LfhYDg~   78 (294)
T PF05212_consen    3 VPCNPRGAERLPPGIVVRESDLELRPLWGNPSEDL---PKKPKYLLAMTVGIKQKDNVDAIVKKF-SDNFDIMLFHYDGR   78 (294)
T ss_pred             cCCCCCccccCCCCccccCCCceeeecCCCccccc---cCCCceEEEEEecHHHHhhhhHHHhhh-ccCceEEEEEecCC
Confidence            46899999999999999999999999999999887   367899999999999999999999999 89999999999999


Q ss_pred             CCccCccCcCCceEEEEeeccchhhhhccccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCC
Q 015715          148 VNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNST  227 (402)
Q Consensus       148 vd~W~d~~ws~~aiHvsa~kqtKWw~akRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~  227 (402)
                      +|+|++|+||++||||++.|||||||||||||||||++|||||||||||+||+|+|+|||+||++||||||||||+++++
T Consensus        79 vd~w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~  158 (294)
T PF05212_consen   79 VDEWDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSS  158 (294)
T ss_pred             cCchhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ceeeeeeeeecCcccceeeeeccCCccccCCCCCCCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcC
Q 015715          228 EIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQG  307 (402)
Q Consensus       228 ~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g  307 (402)
                      ++||+||+|++.++|||   +.++++.|.+++++||||||||||||||||+||+||||||||||+|||||||+|++|+ +
T Consensus       159 ~~~~~iT~R~~~~~vhr---~~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~-~  234 (294)
T PF05212_consen  159 EIHHPITKRRPDSEVHR---KTRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCA-G  234 (294)
T ss_pred             eeeeeEEeecCCceeEe---ccCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHh-c
Confidence            99999999999999998   4577888989999999999999999999999999999999999999999999999999 5


Q ss_pred             CCCCcEEEEeeeeEEecccCCCCCCCCCCccchhhhhhhcCCCCCCcchHHHHHhhHHHHHHHHHHHHHHHhc
Q 015715          308 DRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEAIEQ  380 (402)
Q Consensus       308 ~~~~kiGVVDa~~VvH~~~ptlGg~~~~~~~~~~~~~~~~~~~~~~~~r~~vr~r~~~E~~~f~~R~~~A~~~  380 (402)
                      ++++||||||||||+|+++|||||++.+++              +.++|.+||+||++||++|++||++|++|
T Consensus       235 ~~~~kiGVVDs~~VvH~gvptLG~~~~~~~--------------~~~~~~~Vr~r~~~E~~~F~~R~~~a~~~  293 (294)
T PF05212_consen  235 DRHKKIGVVDSQYVVHTGVPTLGGQGNSEK--------------GKDPREEVRRRSFAEMRIFQKRWANAVKE  293 (294)
T ss_pred             cccccEEEEeeEEEEEcCCCcCCCcccccc--------------CCchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            799999999999999999999999876432              23578999999999999999999999986

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=93.41  E-value=0.29  Score=46.02  Aligned_cols=128  Identities=14%  Similarity=0.073  Sum_probs=72.7

Q ss_pred             CCccEEEEeccccccCCCCHHHHHHHHHHh--CCccccCCc-CCCCCceeeeeeeeecCcccceeeeeccCCccccCCCC
Q 015715          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE--GFEISQPAL-DPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISE  260 (402)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~--gLeISQPAL-d~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~  260 (402)
                      +.||||++.|+|..++.-.+.++++.+++.  +.-+..|.. +.+.+ ...+...... . .-+..       ...+ .+
T Consensus        72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~-------~~~~-~~  140 (281)
T TIGR01556        72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTS-RRLPAIHLDG-L-LLRQI-------SLDG-LT  140 (281)
T ss_pred             CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCc-ccCCceeecc-c-ceeee-------cccc-cC
Confidence            379999999999999998999999988876  567777764 33221 1122211111 0 00000       0000 00


Q ss_pred             CCCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715          261 GPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG  325 (402)
Q Consensus       261 ~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~  325 (402)
                      .+.-+.++=.-+.+++|++++.+= .+..++ -.++.|.-|..-+. ..+.+|.++....+.|..
T Consensus       141 ~~~~~~~~~~sg~li~~~~~~~iG-~fde~~-fi~~~D~e~~~R~~-~~G~~i~~~~~~~~~H~~  202 (281)
T TIGR01556       141 TPQKTSFLISSGCLITREVYQRLG-MMDEEL-FIDHVDTEWSLRAQ-NYGIPLYIDPDIVLEHRI  202 (281)
T ss_pred             CceeccEEEcCcceeeHHHHHHhC-CccHhh-cccchHHHHHHHHH-HCCCEEEEeCCEEEEEec
Confidence            111111110012368999998774 344434 34567766653333 135789999999999973

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=92.57  E-value=0.34  Score=42.52  Aligned_cols=100  Identities=19%  Similarity=0.226  Sum_probs=64.4

Q ss_pred             CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCCCCC
Q 015715          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPP  263 (402)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~pp  263 (402)
                      +.+|||++.|+|..++...+.++.+.++..++.+..|..-...+                                   +
T Consensus        78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------~  122 (202)
T cd04185          78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG-----------------------------------S  122 (202)
T ss_pred             cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC-----------------------------------c
Confidence            57999999999999998888888887764444444433211110                                   1


Q ss_pred             ccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecccCC
Q 015715          264 CTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQT  328 (402)
Q Consensus       264 cTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~~pt  328 (402)
                      +.+      -+++|++|..+ ..+. +.-..||=|.-+..-+.. .+.++ .+.+..+.|....+
T Consensus       123 ~~~------~~~~~~~~~~~-g~~~-~~~~~~~eD~~~~~r~~~-~G~~i-~~~~~~~~h~~~~~  177 (202)
T cd04185         123 FVG------VLISRRVVEKI-GLPD-KEFFIWGDDTEYTLRASK-AGPGI-YVPDAVVVHKTAIN  177 (202)
T ss_pred             eEE------EEEeHHHHHHh-CCCC-hhhhccchHHHHHHHHHH-cCCcE-EecceEEEEccccc
Confidence            111      14888888866 2332 334678877665543331 35688 99999999996443

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=91.14  E-value=0.49  Score=39.13  Aligned_cols=91  Identities=19%  Similarity=0.159  Sum_probs=60.0

Q ss_pred             CccEEEEeccccccCCCCHHHHHHHHHHh-CCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCCCCC
Q 015715          185 NYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPP  263 (402)
Q Consensus       185 ~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~pp  263 (402)
                      .+|||++.|+|..++...+.++.+.+.+. +..+..+.                                          
T Consensus        74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------------  111 (166)
T cd04186          74 KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK------------------------------------------  111 (166)
T ss_pred             CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc------------------------------------------
Confidence            79999999999999888888887754443 22222222                                          


Q ss_pred             ccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEec
Q 015715          264 CTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ  324 (402)
Q Consensus       264 cTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~  324 (402)
                          +=.-+.+|++++++.+-. +.. ....+|-|..+...+.. .+.+|..+....+.|.
T Consensus       112 ----~~~~~~~~~~~~~~~~~~-~~~-~~~~~~eD~~~~~~~~~-~g~~i~~~~~~~~~h~  165 (166)
T cd04186         112 ----VSGAFLLVRREVFEEVGG-FDE-DFFLYYEDVDLCLRARL-AGYRVLYVPQAVIYHH  165 (166)
T ss_pred             ----CceeeEeeeHHHHHHcCC-CCh-hhhccccHHHHHHHHHH-cCCeEEEccceEEEec
Confidence                001245789999987532 332 22237777776654432 4679999999999996

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=90.67  E-value=5.6  Score=37.98  Aligned_cols=139  Identities=14%  Similarity=0.074  Sum_probs=75.2

Q ss_pred             CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCC-ceeeeeeee-ecC---cccceeeeeccCCccccCC
Q 015715          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNST-EIHHKFTIR-ART---KKFHRRVYDLRGSVKCTNI  258 (402)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~-~i~h~iT~R-~~~---~~vHr~~~~~~g~~~C~~~  258 (402)
                      +..|||++.|.|..++..-++++++.+....-.+.-|.+..-.+ ...+.-... ...   ..++...........+...
T Consensus        82 A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (299)
T cd02510          82 ATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRES  161 (299)
T ss_pred             ccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcC
Confidence            67899999999999999999999999998887777787653221 112221110 000   0011000000000000111


Q ss_pred             CCCCCccceEEEeccccChhHHHHhhhhhccCCCcccc-hhhhhh-hhhcCCCCCcEEEEeeeeEEeccc
Q 015715          259 SEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWG-MDMKLG-YCAQGDRTKNVGIIDSEYVVHQGI  326 (402)
Q Consensus       259 ~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWG-LDf~w~-~Ca~g~~~~kiGVVDa~~VvH~~~  326 (402)
                      ...+..+.++-..+=+|+|++|..+=. |.. ....|| =|.-+. ++.+  .+.+|-++-...|.|...
T Consensus       162 ~~~~~~~~~~~g~~~~irr~~~~~vGg-fDe-~~~~~~~ED~Dl~~R~~~--~G~~i~~~p~a~v~H~~~  227 (299)
T cd02510         162 PTAPIRSPTMAGGLFAIDREWFLELGG-YDE-GMDIWGGENLELSFKVWQ--CGGSIEIVPCSRVGHIFR  227 (299)
T ss_pred             CCCCccCccccceeeEEEHHHHHHhCC-CCC-cccccCchhHHHHHHHHH--cCCeEEEeeccEEEEecc
Confidence            112222333323233588999987743 443 345565 343332 2222  246899999999999853

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=84.91  E-value=2.2  Score=38.16  Aligned_cols=124  Identities=15%  Similarity=0.073  Sum_probs=61.6

Q ss_pred             CccEEEEeccccccCCCCHHHHH---HHHH-HhCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCC
Q 015715          185 NYDYIFLWDEDLGVENFDPRRYL---EIVK-SEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISE  260 (402)
Q Consensus       185 ~YDYIflwDDDL~vd~f~i~ryf---~Ivr-~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~  260 (402)
                      .||||++.|+|..++...+.+++   +... ...+-+..|.............. +.....+.  ..      .+.    
T Consensus        75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~------~~~----  141 (237)
T cd02526          75 GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGV-RKSGYKLR--IQ------KEG----  141 (237)
T ss_pred             CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccce-eccCccce--ec------ccc----
Confidence            68999999999999988888885   2222 22344555543322211111110 00000000  00      000    


Q ss_pred             CCCccceEEEe--ccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEec
Q 015715          261 GPPCTGFVEGM--APVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ  324 (402)
Q Consensus       261 ~ppcTgFVEIM--APVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~  324 (402)
                      ..++...-.++  +-+|+|++++.+=. +..+. ...|-|..|...+. ..+.++..+....|.|.
T Consensus       142 ~~~~~~~~~~~~~~~~~rr~~~~~~gg-fd~~~-~~~~eD~d~~~r~~-~~G~~~~~~~~~~v~h~  204 (237)
T cd02526         142 EEGLKEVDFLITSGSLISLEALEKVGG-FDEDL-FIDYVDTEWCLRAR-SKGYKIYVVPDAVLKHE  204 (237)
T ss_pred             cCCceEeeeeeccceEEcHHHHHHhCC-CCHHH-cCccchHHHHHHHH-HcCCcEEEEcCeEEEec
Confidence            00010000111  12589999998754 33222 23355655554333 23568988888888887

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=82.64  E-value=1.4  Score=39.13  Aligned_cols=92  Identities=17%  Similarity=0.166  Sum_probs=54.1

Q ss_pred             CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCCCCC
Q 015715          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPP  263 (402)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~pp  263 (402)
                      +.+|||++.|.|..++...+.++++.....+..+.++.                                 |        
T Consensus        85 a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~---------------------------------~--------  123 (196)
T cd02520          85 ARYDILVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL---------------------------------C--------  123 (196)
T ss_pred             CCCCEEEEECCCceEChhHHHHHHHHhhCCCCCeEEee---------------------------------c--------
Confidence            57999999999998877777777655422111111111                                 0        


Q ss_pred             ccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEec
Q 015715          264 CTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ  324 (402)
Q Consensus       264 cTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~  324 (402)
                      ++    ..+=+|+|++++.+=.+ . ....-.+=|+.+...+.. .+.+|.+++.. ++|.
T Consensus       124 ~~----g~~~~~r~~~~~~~ggf-~-~~~~~~~eD~~l~~rl~~-~G~~i~~~~~~-~~~~  176 (196)
T cd02520         124 AF----GKSMALRREVLDAIGGF-E-AFADYLAEDYFLGKLIWR-LGYRVVLSPYV-VMQP  176 (196)
T ss_pred             cc----CceeeeEHHHHHhccCh-H-HHhHHHHHHHHHHHHHHH-cCCeEEEcchh-eecc
Confidence            00    12337889998876432 1 112234568777755542 46789888774 5555

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=82.38  E-value=2.5  Score=37.75  Aligned_cols=193  Identities=16%  Similarity=0.130  Sum_probs=88.5

Q ss_pred             eEEEEeccCcccccHHHHHhhcCC---CCcEEEEEEeCCCCCccCc-c-----CcCCceEEEEee---cc--chhhhhcc
Q 015715          111 NLLAIPAGIKQKDNVDAIVRKFLP---ENFTVILFHYDGDVNAWRG-L-----DWSNKAIHIAAQ---NQ--TKWWFAKR  176 (402)
Q Consensus       111 ~Lva~~VG~kqk~~Vd~~v~kf~~---~nFdv~LFhYDg~vd~W~d-~-----~ws~~aiHvsa~---kq--tKWw~akR  176 (402)
                      -.|++++-.. ...+...|+-...   .++.|+++.-+. .++=.+ +     .+....+++...   .+  +|-..+..
T Consensus         3 v~Vvip~~~~-~~~l~~~l~sl~~~~~~~~~v~vvd~~~-~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n~   80 (228)
T PF13641_consen    3 VSVVIPAYNE-DDVLRRCLESLLAQDYPRLEVVVVDDGS-DDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALNE   80 (228)
T ss_dssp             EEEE--BSS--HHHHHHHHHHHTTSHHHTEEEEEEEE-S-SS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHHH
T ss_pred             EEEEEEecCC-HHHHHHHHHHHHcCCCCCeEEEEEECCC-ChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHHH
Confidence            4556665443 2345555554432   568888877333 222111 1     233323454322   22  34444444


Q ss_pred             ccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCc--ccceeeeeccCCcc
Q 015715          177 FLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTK--KFHRRVYDLRGSVK  254 (402)
Q Consensus       177 FLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~--~vHr~~~~~~g~~~  254 (402)
                      .+.   ...+|||++.|+|..++...+.++++.+...+..+.++........  ..++.-....  .-|..++      .
T Consensus        81 ~~~---~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~  149 (228)
T PF13641_consen   81 ALA---AARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDR--NWLTRLQDLFFARWHLRFR------S  149 (228)
T ss_dssp             HHH---H---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCC--CEEEE-TT--S-EETTTS-------T
T ss_pred             HHH---hcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCC--CHHHHHHHHHHhhhhhhhh------h
Confidence            442   1459999999999999999999999999778888888665332211  1111111100  0000000      0


Q ss_pred             ccCCCCCCCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715          255 CTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG  325 (402)
Q Consensus       255 C~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~  325 (402)
                      .........++|    -+=+|+|+++..+-. |..   ..-|=|+.+...+.. .+.+|.......|.|..
T Consensus       150 ~~~~~~~~~~~G----~~~~~rr~~~~~~g~-fd~---~~~~eD~~l~~r~~~-~G~~~~~~~~~~v~~~~  211 (228)
T PF13641_consen  150 GRRALGVAFLSG----SGMLFRRSALEEVGG-FDP---FILGEDFDLCLRLRA-AGWRIVYAPDALVYHEE  211 (228)
T ss_dssp             T-B----S-B------TEEEEEHHHHHHH-S---S---SSSSHHHHHHHHHHH-TT--EEEEEEEEEEE--
T ss_pred             hhcccceeeccC----cEEEEEHHHHHHhCC-CCC---CCcccHHHHHHHHHH-CCCcEEEECCcEEEEeC
Confidence            000000111111    122589999988863 322   444577777643332 46789999888888884

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	402
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 9e-04
 Identities = 48/302 (15%), Positives = 96/302 (31%), Gaps = 75/302 (24%)

Query: 107 YSNRNLLAI--PAGIKQ---KDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAI 161
           Y  +++L++   A +     KD  D        E    I+   D  V+    L W     
Sbjct: 16  YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD-AVSGTLRLFW----T 70

Query: 162 HIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPA 221
            ++ Q +      ++F+   +  NY   FL    +  E   P     +   +        
Sbjct: 71  LLSKQEEM----VQKFVEEVLRINYK--FLMSP-IKTEQRQPSMMTRMYIEQ-------- 115

Query: 222 LDP--NSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTG-FVEGMA----PV 274
            D   N  ++  K+ +  R + + +    LR       + E  P     ++G+       
Sbjct: 116 RDRLYNDNQVFAKYNVS-RLQPYLK----LR-----QALLELRPAKNVLIDGVLGSGKTW 165

Query: 275 FSRSAWYCAWHLIQ---NDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQTLGG 331
            +     C  + +Q   +  +  W   + L  C            +S   V + +Q L  
Sbjct: 166 VALDV--CLSYKVQCKMDFKIF-W---LNLKNC------------NSPETVLEMLQKLLY 207

Query: 332 QPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEAIE-----QDKSWVD 386
           Q      T R + +         ++AE+RR       +  K +   +      Q+    +
Sbjct: 208 Q-IDPNWTSRSDHSSNIKLRIHSIQAELRR------LLKSKPYENCLLVLLNVQNAKAWN 260

Query: 387 PF 388
            F
Sbjct: 261 AF 262

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	402
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	89.44
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	83.52

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=89.44  E-value=0.68  Score=40.43  Aligned_cols=119  Identities=8%  Similarity=-0.053  Sum_probs=67.1

Q ss_pred             CCccEEEEeccccccCCCCHHHHHHHHHHh-CCccccCCc-----CCCCCceeeeeeeeecCcccceeeeeccCCccccC
Q 015715          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPAL-----DPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN  257 (402)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPAL-----d~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~  257 (402)
                      +..|||++.|+|..++...+.++++.++++ +..+..+..     +.+. ...+.. . .+...+.          .   
T Consensus        87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~----------~---  150 (255)
T 1qg8_A           87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENR-DIVKET-V-RPAAQVT----------W---  150 (255)
T ss_dssp             CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-E-ECCCSCB----------S---
T ss_pred             cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCC-cchhhc-c-CchHHHH----------H---
Confidence            578999999999999998899999999876 666665543     2211 111110 0 0100000          0   


Q ss_pred             CCCCCCccceEEEeccccChhHHHHhh-hh---hccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715          258 ISEGPPCTGFVEGMAPVFSRSAWYCAW-HL---IQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG  325 (402)
Q Consensus       258 ~~~~ppcTgFVEIMAPVFSR~Awrcvw-~m---iqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~  325 (402)
                           ....++-..+=+|+|++++.+- .+   +..+.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus       151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~  215 (255)
T 1qg8_A          151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI  215 (255)
T ss_dssp             -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred             -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence                 0011111234468999999875 32   111222334567665544432 23 69999988888773

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=83.52  E-value=1.7  Score=42.37  Aligned_cols=39  Identities=15%  Similarity=0.054  Sum_probs=33.5

Q ss_pred             CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCc
Q 015715          184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPAL  222 (402)
Q Consensus       184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPAL  222 (402)
                      +..|||+|.|+|..++.--++++++.+++..-.+.-|.+
T Consensus       113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~  151 (472)
T 1xhb_A          113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPII  151 (472)
T ss_dssp             CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred             ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeee
Confidence            568999999999999999999999999987765655654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	402
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	82.77

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.77  E-value=0.95  Score=39.39  Aligned_cols=140  Identities=16%  Similarity=0.063  Sum_probs=73.1

Q ss_pred             cCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCc-eee----eeeeeecCccccee--eeeccCCccc
Q 015715          183 VSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTE-IHH----KFTIRARTKKFHRR--VYDLRGSVKC  255 (402)
Q Consensus       183 v~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~-i~h----~iT~R~~~~~vHr~--~~~~~g~~~C  255 (402)
                      .+.-|||++.|+|..++.-.++++++.+.+..-.+..|.++.-.+. ..+    ..+.-.-...++..  .+........
T Consensus       105 ~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (328)
T d1xhba2         105 VSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRR  184 (328)
T ss_dssp             HCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHT
T ss_pred             hhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCccccccccccccccccccchhhhhcc
Confidence            4678999999999999999999999999998887777765321100 000    00000000001100  0000000000


Q ss_pred             cCCCCCCCccceEEEeccccChhHHHHhhhhhccCCCcccc---hhhhhhhhhcCCCCCcEEEEeeeeEEecccC
Q 015715          256 TNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWG---MDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQ  327 (402)
Q Consensus       256 ~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWG---LDf~w~~Ca~g~~~~kiGVVDa~~VvH~~~p  327 (402)
                      ....+.+..+.++-.-+=.++|++|..+= .|. +....||   +|+.+.....   +.+|..+-...|.|....
T Consensus       185 ~~~~~~~~~~~~~~g~~~~irr~~f~~vG-gfD-e~~~~~g~ED~Dl~~R~~~~---G~~i~~~p~~~v~H~~~~  254 (328)
T d1xhba2         185 KGDRTLPVRTPTMAGGLFSIDRDYFQEIG-TYD-AGMDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVFRK  254 (328)
T ss_dssp             TTCTTSCEECSBCCSSSEEEEHHHHHHTT-SCC-TTSCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC--
T ss_pred             ccccccccccceecceeeeeeHHHHHHhC-CCC-CCCcCcCchHHHHHHHHHHh---CCeEEEeCCeEEEEeCCC
Confidence            00111222222222222246899999764 243 3345565   4455543333   568999999999997533