Citrus Sinensis ID: 015732

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-
MRFSESRKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ
cEEEcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHcHHHHcccccccccccccccHHHHcccccccccccccccccccccEEEEEEEcHHHHHcccEEEEEEEEEEEccccccccccccccccccccccccEEEEEEEEccccEEEEEEEccccccEEEEEccccccccccccEEEEEEEEEEEEEccccccccEEEEccccccccccccccEEEEEEEccccccEEEcccEEEEEEccHHHHccccEEEEEcccccEEEEEEccccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHccccccccccccccccEEEEEcccccHHHHHHHHHHHHcccccccccccccccccccccc
cEEccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccccccccccEEEEEEEEHHHHHcccEEEEEEccEEEccccccccccccccccccccccccEEEEEEcccccHHEEEEccccccccccEEEccccccccccccEEEEEEEEEEEEEccccccccEEEEccccccccccccccEEEEEEEcccccEEEccccEEEEEEEEHHHHHcccEEEEEcccccEEEEEEccccEEccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHccccccccccccccccccEEEEEcccHHHHHHHcccccccccccccccccccccEEEccc
mrfsesrknaSQDDLKKAYRKAAIknhpdkggdpeKFKELAQAYEVlsdpekreIYDQYGEDalkegmgggggahdpfdifqsffggspfggssrgrrqrrgedvihpLKVSLEDLyngtskklslsrnvictkckgkgsksgasmkcsgcqgsgmkvsirhlgpsmiqqmqhpcneckgtgetindkdrcpqckgekviqEKKVLEVIVEKGmqngqkitfpgeadeapdtvtGDIVFVLQqkehpkfkrkgddlFVEHTLSLTEALCGFQFVIthldgrqlliksqpgevvkpdqfkaindegmpmyqrpfmrgklyihftvdfpeslspdqckmletvlpprtsvqltdmeldeceettlhdvNIEEEMRRKQQAAQEaydedddmqggaqrVQCAQQ
mrfsesrknasqdDLKKAYRKAAIknhpdkggdpekFKELAQAYevlsdpekrEIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGgssrgrrqrrgedVIHPLKVSLEDLyngtskklslsrnvICTKckgkgsksgasmkcsgCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTgetindkdrcpqckgekviqekkVLEVIVEKGmqngqkitfpgeadeapdTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIksqpgevvkpdqfkaindegmPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETtlhdvnieeeMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ
MRFSESRKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEgmgggggAHDPFDIfqsffggspfggssrgrrqrrgEDVIHPLKVSLEDLYNGTSKKLSLSRNVIctkckgkgsksgasmkcsgcQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKqqaaqeaydedddmqGGAQRVQCAQQ
********************************************************************************F**F*********************IHPLKVSLEDLYNGTSKKLSLSRNVICTKC*********************************************************QCKGEKVIQEKKVLEVIVEKGMQN**KITF********DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL***********************************************************
MRFSESRKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYG*******************IFQSF************************LKVSLEDLYNGTSKKLSLSRNVICTKCKG**********CSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGE****PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV****************CEETTL**************************************
***************KKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFG**********GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCK***************QGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEE******************************
*RFSESRKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFG*********RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKG*KS*ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEE******************************
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MRFSESRKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIFQSFFGGSPFGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query401 2.2.26 [Sep-21-2011]
Q04960413 DnaJ protein homolog OS=C N/A no 0.975 0.946 0.911 0.0
P43644417 DnaJ protein homolog ANJ1 N/A no 0.980 0.942 0.879 0.0
Q03363397 DnaJ protein homolog 1 (F N/A no 0.982 0.992 0.863 0.0
P42824418 DnaJ protein homolog 2 OS N/A no 0.982 0.942 0.856 0.0
P42825419 Chaperone protein dnaJ 2 yes no 0.982 0.940 0.816 0.0
Q94AW8420 Chaperone protein dnaJ 3 no no 0.982 0.938 0.839 1e-176
P31689397 DnaJ homolog subfamily A yes no 0.937 0.947 0.516 1e-103
Q5E954397 DnaJ homolog subfamily A yes no 0.937 0.947 0.516 1e-103
Q5NVI9396 DnaJ homolog subfamily A yes no 0.935 0.946 0.511 1e-103
Q95JF4397 DnaJ homolog subfamily A N/A no 0.937 0.947 0.513 1e-103
>sp|Q04960|DNJH_CUCSA DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1 Back     alignment and function desciption
 Score =  691 bits (1784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/396 (91%), Positives = 376/396 (94%), Gaps = 5/396 (1%)

Query: 8   KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG 67
           KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG
Sbjct: 21  KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG 80

Query: 68  MGGGGGAHDPFDIFQSFFGGSPFGGSSRGRRQRRG--EDVIHPLKVSLEDLYNGTSKKLS 125
           MGGGG  HDPFDIFQSFFGGSPFGG    R +R+   EDVIHPLKVSLEDLYNGTSKKLS
Sbjct: 81  MGGGG-GHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLS 139

Query: 126 LSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 185
           LSRNVIC+KCKGKGSKSGASMKC GCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI
Sbjct: 140 LSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 199

Query: 186 NDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKE 245
           NDKDRC QCKGEKV+QEKKVLEVIVEKGMQN QKITFPGEADEAPDTVTGDIVFVLQQKE
Sbjct: 200 NDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNAQKITFPGEADEAPDTVTGDIVFVLQQKE 259

Query: 246 HPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEG 305
           HPKFKRKGDDLFVEHTLSL E+LCGFQF++THLDGRQLLIKS PGEVVKPDQFKAINDEG
Sbjct: 260 HPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEG 319

Query: 306 MPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHD 365
           MPMYQRPFM+GKLYIHF+V+FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHD
Sbjct: 320 MPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHD 379

Query: 366 VNIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 401
           VNIEEEMRRKQ  AQEAYDED+DM GGAQRVQCAQQ
Sbjct: 380 VNIEEEMRRKQ--AQEAYDEDEDMHGGAQRVQCAQQ 413
Have a continuous role in plant development probably in the structural organization of compartments.
Cucumis sativus (taxid: 3659)
>sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1 Back     alignment and function description
>sp|Q03363|DNJH1_ALLPO DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1 Back     alignment and function description
>sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1 Back     alignment and function description
>sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2 Back     alignment and function description
>sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2 Back     alignment and function description
>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2 Back     alignment and function description
>sp|Q5E954|DNJA1_BOVIN DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2 Back     alignment and function description
>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1 Back     alignment and function description
>sp|Q95JF4|DNAJ1_CHLAE DnaJ homolog subfamily A member 1 OS=Chlorocebus aethiops GN=DNAJA1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query401
4210948415 DnaJ protein [Hevea brasiliensis] 0.980 0.946 0.908 0.0
4008159420 DnaJ homolog [Salix gilgiana] 0.982 0.938 0.902 0.0
255546721418 Chaperone protein dnaJ, putative [Ricinu 0.982 0.942 0.929 0.0
350536331419 DnaJ-like protein [Solanum lycopersicum] 0.982 0.940 0.894 0.0
225463715416 PREDICTED: dnaJ protein homolog [Vitis v 0.980 0.944 0.911 0.0
161137763417 DnaJ [Viola baoshanensis] 0.982 0.944 0.904 0.0
224097588420 predicted protein [Populus trichocarpa] 0.982 0.938 0.904 0.0
224113389422 predicted protein [Populus trichocarpa] 0.982 0.933 0.900 0.0
449525882413 PREDICTED: dnaJ protein homolog [Cucumis 0.975 0.946 0.911 0.0
10945669418 J1P [Daucus carota] gi|10945671|gb|AAG24 0.982 0.942 0.899 0.0
>gi|4210948|gb|AAD12055.1| DnaJ protein [Hevea brasiliensis] Back     alignment and taxonomy information
 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/395 (90%), Positives = 373/395 (94%), Gaps = 2/395 (0%)

Query: 8   KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG 67
           KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG
Sbjct: 22  KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG 81

Query: 68  MGGGGGAHDPFDIFQSFFGGSPFGGSSRGRRQ-RRGEDVIHPLKVSLEDLYNGTSKKLSL 126
           MG GGGAHDPFDIFQSFFGG+PFGG    R + + GEDVIHPLKVSLEDLYNGTSKKLSL
Sbjct: 82  MGSGGGAHDPFDIFQSFFGGNPFGGGGSSRGRRKEGEDVIHPLKVSLEDLYNGTSKKLSL 141

Query: 127 SRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 186
           SRNVIC+KCKGKGSKSGASMKCSGCQGSGMKVSIR LGPSMIQQMQHPCNECKGTGETIN
Sbjct: 142 SRNVICSKCKGKGSKSGASMKCSGCQGSGMKVSIRQLGPSMIQQMQHPCNECKGTGETIN 201

Query: 187 DKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEH 246
           DKDRCPQCKGEKV+QEKKVLEVIVEKGMQNGQ+ITFPGEADEAPDT+TGDIVFVLQQKEH
Sbjct: 202 DKDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQRITFPGEADEAPDTITGDIVFVLQQKEH 261

Query: 247 PKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGM 306
           PKFKRKGDDL V+HTLSLTEALC  QF++THLDG  LLIKSQPGEVVKPDQFKAINDEGM
Sbjct: 262 PKFKRKGDDLIVDHTLSLTEALCASQFILTHLDG-DLLIKSQPGEVVKPDQFKAINDEGM 320

Query: 307 PMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDV 366
           PMYQRPFMRGKLYIHF+VDFP+SL PDQCK LE VLP RTSVQL+DMELDECEETTLHDV
Sbjct: 321 PMYQRPFMRGKLYIHFSVDFPDSLPPDQCKALEAVLPSRTSVQLSDMELDECEETTLHDV 380

Query: 367 NIEEEMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 401
           N +EEMRRKQQ AQEAYDEDDDM GG QRVQCAQQ
Sbjct: 381 NFDEEMRRKQQQAQEAYDEDDDMHGGGQRVQCAQQ 415

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|4008159|dbj|BAA35121.1| DnaJ homolog [Salix gilgiana] Back     alignment and taxonomy information
>gi|255546721|ref|XP_002514419.1| Chaperone protein dnaJ, putative [Ricinus communis] gi|111143344|gb|ABH06547.1| molecular chaperone [Ricinus communis] gi|223546415|gb|EEF47915.1| Chaperone protein dnaJ, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|350536331|ref|NP_001234241.1| DnaJ-like protein [Solanum lycopersicum] gi|6782421|gb|AAF28382.1|AF124139_1 DnaJ-like protein [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|225463715|ref|XP_002263156.1| PREDICTED: dnaJ protein homolog [Vitis vinifera] gi|296084435|emb|CBI24994.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|161137763|gb|ABX57881.1| DnaJ [Viola baoshanensis] Back     alignment and taxonomy information
>gi|224097588|ref|XP_002310999.1| predicted protein [Populus trichocarpa] gi|222850819|gb|EEE88366.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224113389|ref|XP_002316479.1| predicted protein [Populus trichocarpa] gi|118486965|gb|ABK95315.1| unknown [Populus trichocarpa] gi|222865519|gb|EEF02650.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449525882|ref|XP_004169945.1| PREDICTED: dnaJ protein homolog [Cucumis sativus] gi|461944|sp|Q04960.1|DNJH_CUCSA RecName: Full=DnaJ protein homolog; AltName: Full=DNAJ-1; Flags: Precursor gi|18260|emb|CAA47925.1| cs DnaJ-1 [Cucumis sativus] Back     alignment and taxonomy information
>gi|10945669|gb|AAG24642.1|AF308737_1 J1P [Daucus carota] gi|10945671|gb|AAG24643.1|AF308738_1 J2P [Daucus carota] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query401
TAIR|locus:2081378420 J3 [Arabidopsis thaliana (taxi 0.982 0.938 0.718 3e-149
TAIR|locus:505006628419 J2 "DNAJ homologue 2" [Arabido 0.982 0.940 0.690 9.3e-146
ZFIN|ZDB-GENE-030131-2884413 dnaja2l "DnaJ (Hsp40) homolog, 0.895 0.869 0.459 6.2e-85
UNIPROTKB|O60884412 DNAJA2 "DnaJ homolog subfamily 0.972 0.946 0.441 8e-85
UNIPROTKB|Q2HJ94412 DNAJA2 "DnaJ homolog subfamily 0.875 0.851 0.473 1.3e-84
UNIPROTKB|F1RP05412 LOC100521133 "Uncharacterized 0.875 0.851 0.473 1.7e-84
MGI|MGI:1931882412 Dnaja2 "DnaJ (Hsp40) homolog, 0.972 0.946 0.439 2.7e-84
UNIPROTKB|Q5M9H7412 Dnaja2 "DnaJ homolog subfamily 0.972 0.946 0.439 2.7e-84
RGD|71001412 Dnaja2 "DnaJ (Hsp40) homolog, 0.972 0.946 0.436 9.1e-84
UNIPROTKB|E2R7F3413 DNAJA2 "Uncharacterized protei 0.875 0.849 0.472 1.5e-83
TAIR|locus:2081378 J3 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
 Identities = 286/398 (71%), Positives = 309/398 (77%)

Query:     8 KNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEX 67
             K+AS +DLKKAY+KAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 
Sbjct:    23 KSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG 82

Query:    68 XXXXXXAHDPFDIXXXXXXXX-XXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSL 126
                    HDPFDI                       EDV+HPLKVSLED+Y GT KKLSL
Sbjct:    83 MGGGGGGHDPFDIFSSFFGGGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTMKKLSL 142

Query:   127 SRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 186
             SRN +                    QGSGMKVSIR LGP MIQQMQH CNECKGTGETIN
Sbjct:   143 SRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQLGPGMIQQMQHACNECKGTGETIN 202

Query:   187 DKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEH 246
             D+DRCPQCKG+KVI EKKVLEV VEKGMQ+ QKITF G+ADEAPDTVTGDIVFVLQQKEH
Sbjct:   203 DRDRCPQCKGDKVIPEKKVLEVNVEKGMQHSQKITFEGQADEAPDTVTGDIVFVLQQKEH 262

Query:   247 PKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGM 306
             PKFKRKG+DLFVEHTLSLTEALCGFQFV+THLDGR LLIKS PGEVVKPD +KAI+DEGM
Sbjct:   263 PKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGM 322

Query:   307 PMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDV 366
             P+YQRPFM+GKLYIHFTV+FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDV
Sbjct:   323 PIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDV 382

Query:   367 NIEEEMRRKXXXXXXXXXXXXXXX---GGAQRVQCAQQ 401
             NIE+EMRRK                  GGAQRVQCAQQ
Sbjct:   383 NIEDEMRRKAQAQREAYDDDDEDDDHPGGAQRVQCAQQ 420
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006457 "protein folding" evidence=ISS
GO:0031072 "heat shock protein binding" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IEA
GO:0005730 "nucleolus" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009651 "response to salt stress" evidence=IMP
GO:0043462 "regulation of ATPase activity" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
GO:0009911 "positive regulation of flower development" evidence=IMP
GO:0048573 "photoperiodism, flowering" evidence=IMP
GO:0009506 "plasmodesma" evidence=IDA
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
TAIR|locus:505006628 J2 "DNAJ homologue 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-2884 dnaja2l "DnaJ (Hsp40) homolog, subfamily A, member 2, like" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|O60884 DNAJA2 "DnaJ homolog subfamily A member 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q2HJ94 DNAJA2 "DnaJ homolog subfamily A member 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RP05 LOC100521133 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1931882 Dnaja2 "DnaJ (Hsp40) homolog, subfamily A, member 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5M9H7 Dnaja2 "DnaJ homolog subfamily A member 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|71001 Dnaja2 "DnaJ (Hsp40) homolog, subfamily A, member 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2R7F3 DNAJA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q98DD2DNAJ_RHILONo assigned EC number0.34300.80540.8590yesno
Q95JF4DNAJ1_CHLAENo assigned EC number0.51390.93760.9471N/Ano
P43644DNJH_ATRNUNo assigned EC number0.87900.98000.9424N/Ano
P31689DNJA1_HUMANNo assigned EC number0.51650.93760.9471yesno
B9KH92DNAJ_ANAMFNo assigned EC number0.35150.81290.8601yesno
Q4FNQ0DNAJ_PELUBNo assigned EC number0.36590.80040.8537yesno
P63036DNJA1_RATNo assigned EC number0.51390.93760.9471yesno
P63037DNJA1_MOUSENo assigned EC number0.51390.93760.9471yesno
Q5E954DNJA1_BOVINNo assigned EC number0.51650.93760.9471yesno
Q11KJ5DNAJ_MESSBNo assigned EC number0.34400.80040.8582yesno
Q94AW8DNAJ3_ARATHNo assigned EC number0.83910.98250.9380nono
P25491MAS5_YEASTNo assigned EC number0.44660.95760.9388yesno
O74752MAS5_SCHPONo assigned EC number0.47860.96250.9484yesno
Q5NVI9DNJA1_PONABNo assigned EC number0.51140.93510.9469yesno
Q03363DNJH1_ALLPONo assigned EC number0.86390.98250.9924N/Ano
Q5P9E0DNAJ_ANAMMNo assigned EC number0.35150.81290.8601yesno
Q04960DNJH_CUCSANo assigned EC number0.91160.97500.9467N/Ano
P42824DNJH2_ALLPONo assigned EC number0.85640.98250.9425N/Ano
P42825DNAJ2_ARATHNo assigned EC number0.81610.98250.9403yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
PTZ00037421 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov 1e-147
COG0484371 COG0484, DnaJ, DnaJ-class molecular chaperone with 1e-109
TIGR02349354 TIGR02349, DnaJ_bact, chaperone protein DnaJ 4e-96
PRK10767371 PRK10767, PRK10767, chaperone protein DnaJ; Provis 9e-77
PRK14278378 PRK14278, PRK14278, chaperone protein DnaJ; Provis 2e-64
PRK14291382 PRK14291, PRK14291, chaperone protein DnaJ; Provis 2e-62
PRK14289386 PRK14289, PRK14289, chaperone protein DnaJ; Provis 2e-60
PRK14294366 PRK14294, PRK14294, chaperone protein DnaJ; Provis 3e-58
PRK14281397 PRK14281, PRK14281, chaperone protein DnaJ; Provis 8e-58
PRK14293374 PRK14293, PRK14293, chaperone protein DnaJ; Provis 3e-57
PRK14301373 PRK14301, PRK14301, chaperone protein DnaJ; Provis 8e-57
PRK14283378 PRK14283, PRK14283, chaperone protein DnaJ; Provis 6e-56
PRK14280376 PRK14280, PRK14280, chaperone protein DnaJ; Provis 4e-55
PRK14297380 PRK14297, PRK14297, chaperone protein DnaJ; Provis 7e-54
PRK14286372 PRK14286, PRK14286, chaperone protein DnaJ; Provis 9e-54
PRK14285365 PRK14285, PRK14285, chaperone protein DnaJ; Provis 2e-53
PRK14292371 PRK14292, PRK14292, chaperone protein DnaJ; Provis 6e-53
PRK14290365 PRK14290, PRK14290, chaperone protein DnaJ; Provis 7e-53
PRK14277386 PRK14277, PRK14277, chaperone protein DnaJ; Provis 2e-52
PRK14276380 PRK14276, PRK14276, chaperone protein DnaJ; Provis 3e-52
PRK14298377 PRK14298, PRK14298, chaperone protein DnaJ; Provis 3e-50
PRK14282369 PRK14282, PRK14282, chaperone protein DnaJ; Provis 6e-49
PRK14284391 PRK14284, PRK14284, chaperone protein DnaJ; Provis 6e-49
PRK14295389 PRK14295, PRK14295, chaperone protein DnaJ; Provis 2e-46
PRK14279392 PRK14279, PRK14279, chaperone protein DnaJ; Provis 5e-45
PRK14296372 PRK14296, PRK14296, chaperone protein DnaJ; Provis 2e-44
PRK14300372 PRK14300, PRK14300, chaperone protein DnaJ; Provis 2e-43
cd10747158 cd10747, DnaJ_C, C-terminal substrate binding doma 7e-43
PRK14287371 PRK14287, PRK14287, chaperone protein DnaJ; Provis 2e-42
PRK14288369 PRK14288, PRK14288, chaperone protein DnaJ; Provis 2e-39
PRK14299291 PRK14299, PRK14299, chaperone protein DnaJ; Provis 2e-25
pfam0155681 pfam01556, DnaJ_C, DnaJ C terminal domain 1e-23
pfam0022663 pfam00226, DnaJ, DnaJ domain 3e-22
pfam0068465 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain 2e-19
cd1071965 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H 6e-18
PRK10266306 PRK10266, PRK10266, curved DNA-binding protein Cbp 2e-17
smart0027160 smart00271, DnaJ, DnaJ molecular chaperone homolog 3e-17
cd0625755 cd06257, DnaJ, DnaJ domain or J-domain 1e-14
COG2214237 COG2214, CbpA, DnaJ-class molecular chaperone [Pos 3e-14
TIGR03835 871 TIGR03835, termin_org_DnaJ, terminal organelle ass 3e-14
PHA03102153 PHA03102, PHA03102, Small T antigen; Reviewed 1e-08
PHA02624 647 PHA02624, PHA02624, large T antigen; Provisional 9e-08
COG5407610 COG5407, SEC63, Preprotein translocase subunit Sec 1e-06
PRK14299291 PRK14299, PRK14299, chaperone protein DnaJ; Provis 2e-06
COG5269379 COG5269, ZUO1, Ribosome-associated chaperone zuoti 3e-05
cd10747158 cd10747, DnaJ_C, C-terminal substrate binding doma 8e-05
PTZ00341 1136 PTZ00341, PTZ00341, Ring-infected erythrocyte surf 0.002
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional Back     alignment and domain information 
 Score =  424 bits (1091), Expect = e-147
 Identities = 185/399 (46%), Positives = 254/399 (63%), Gaps = 14/399 (3%)

Query: 5   ESRKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDAL 64
              K+ +  ++KKAYRK AIK+HPDKGGDPEKFKE+++AYEVLSDPEKR+IYD+YGE   
Sbjct: 35  NLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRKIYDEYGE--- 91

Query: 65  KEGMGGGGGAHDPFDIFQSFFGGSPFGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKL 124
            EG+ GG    D  D+F   FGG       +   ++RGED++  LKV+LE +YNG  +KL
Sbjct: 92  -EGLEGGEQPADASDLFDLIFGGG-----RKPGGKKRGEDIVSHLKVTLEQIYNGAMRKL 145

Query: 125 SLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET 184
           +++++VIC  C+G G    A + C  C G G++V IR +G  MI Q Q  CN C G G+ 
Sbjct: 146 AINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKI 204

Query: 185 INDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQK 244
           I +  +C  C G+ V + +K+LEV ++KG+ N  KITF GEADE P+ + G++VF+L +K
Sbjct: 205 IPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEK 264

Query: 245 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDE 304
            H  FKR+G DLF+   +SL EAL GF F ITHLDGR+LL+ + PGEVVKP   K IN+E
Sbjct: 265 PHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNE 324

Query: 305 GMPMYQRPFMRGKLYIHFTVDFPESLSPD-QCKMLETVLPPRTSVQLTDMELDECEETTL 363
           GMP Y+ PF +G LY+ F V FP       + K +   L P+   +  D+E  E E  T 
Sbjct: 325 GMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQNPEEKKDLEDTEIEVVTA 384

Query: 364 HDVNIEE-EMRRKQQAAQEAYDEDDDMQGGAQRVQCAQQ 401
            +V+ EE + R ++Q  QE  D++       +RV C QQ
Sbjct: 385 QNVDPEEVKDRDQKQQYQEDEDDEHHQ--EGERVACRQQ 421

Length = 421
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ Back     alignment and domain information
>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40 Back     alignment and domain information
>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain Back     alignment and domain information
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain Back     alignment and domain information
>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain Back     alignment and domain information
>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40 Back     alignment and domain information
>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain Back     alignment and domain information
>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain Back     alignment and domain information
>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ Back     alignment and domain information
>gnl|CDD|222986 PHA03102, PHA03102, Small T antigen; Reviewed Back     alignment and domain information
>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional Back     alignment and domain information
>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional Back     alignment and domain information
>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40 Back     alignment and domain information
>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 401
PTZ00037421 DnaJ_C chaperone protein; Provisional 100.0
COG0484371 DnaJ DnaJ-class molecular chaperone with C-termina 100.0
KOG0712337 consensus Molecular chaperone (DnaJ superfamily) [ 100.0
PRK14296372 chaperone protein DnaJ; Provisional 100.0
PRK14288369 chaperone protein DnaJ; Provisional 100.0
PRK14298377 chaperone protein DnaJ; Provisional 100.0
PRK14286372 chaperone protein DnaJ; Provisional 100.0
PRK14278378 chaperone protein DnaJ; Provisional 100.0
PRK14287371 chaperone protein DnaJ; Provisional 100.0
PRK14276380 chaperone protein DnaJ; Provisional 100.0
PRK14280376 chaperone protein DnaJ; Provisional 100.0
PRK14277386 chaperone protein DnaJ; Provisional 100.0
PRK14297380 chaperone protein DnaJ; Provisional 100.0
PRK14282369 chaperone protein DnaJ; Provisional 100.0
PRK14285365 chaperone protein DnaJ; Provisional 100.0
PRK14284391 chaperone protein DnaJ; Provisional 100.0
PRK14279392 chaperone protein DnaJ; Provisional 100.0
PRK14281397 chaperone protein DnaJ; Provisional 100.0
TIGR02349354 DnaJ_bact chaperone protein DnaJ. This model repre 100.0
PRK14301373 chaperone protein DnaJ; Provisional 100.0
PRK14294366 chaperone protein DnaJ; Provisional 100.0
PRK14295389 chaperone protein DnaJ; Provisional 100.0
PRK14290365 chaperone protein DnaJ; Provisional 100.0
PRK10767371 chaperone protein DnaJ; Provisional 100.0
PRK14300372 chaperone protein DnaJ; Provisional 100.0
PRK14283378 chaperone protein DnaJ; Provisional 100.0
PRK14291382 chaperone protein DnaJ; Provisional 100.0
PRK14292371 chaperone protein DnaJ; Provisional 100.0
PRK14293374 chaperone protein DnaJ; Provisional 100.0
PRK14289386 chaperone protein DnaJ; Provisional 100.0
PRK14299291 chaperone protein DnaJ; Provisional 100.0
PRK10266306 curved DNA-binding protein CbpA; Provisional 100.0
KOG0713336 consensus Molecular chaperone (DnaJ superfamily) [ 100.0
TIGR03835871 termin_org_DnaJ terminal organelle assembly protei 100.0
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 100.0
KOG0714306 consensus Molecular chaperone (DnaJ superfamily) [ 99.92
PF0155681 CTDII: DnaJ C terminal domain; InterPro: IPR002939 99.86
PHA03102153 Small T antigen; Reviewed 99.8
KOG0716279 consensus Molecular chaperone (DnaJ superfamily) [ 99.79
PTZ00341 1136 Ring-infected erythrocyte surface antigen; Provisi 99.77
KOG0718 546 consensus Molecular chaperone (DnaJ superfamily) [ 99.75
KOG0691296 consensus Molecular chaperone (DnaJ superfamily) [ 99.72
KOG0717508 consensus Molecular chaperone (DnaJ superfamily) [ 99.7
COG2214237 CbpA DnaJ-class molecular chaperone [Posttranslati 99.7
KOG0719264 consensus Molecular chaperone (DnaJ superfamily) [ 99.67
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 99.66
PF0022664 DnaJ: DnaJ domain; InterPro: IPR001623 The prokary 99.66
COG0484371 DnaJ DnaJ-class molecular chaperone with C-termina 99.57
KOG0721230 consensus Molecular chaperone (DnaJ superfamily) [ 99.57
PF0068466 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0 99.56
smart0027160 DnaJ DnaJ molecular chaperone homology domain. 99.56
cd0625755 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho 99.51
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 99.5
PTZ00100116 DnaJ chaperone protein; Provisional 99.44
KOG0722329 consensus Molecular chaperone (DnaJ superfamily) [ 99.4
PHA02624 647 large T antigen; Provisional 99.38
PRK01356166 hscB co-chaperone HscB; Provisional 99.37
PRK05014171 hscB co-chaperone HscB; Provisional 99.36
PRK14282369 chaperone protein DnaJ; Provisional 99.33
PRK14295389 chaperone protein DnaJ; Provisional 99.31
PRK14294366 chaperone protein DnaJ; Provisional 99.29
PRK00294173 hscB co-chaperone HscB; Provisional 99.28
PRK03578176 hscB co-chaperone HscB; Provisional 99.27
PRK14290365 chaperone protein DnaJ; Provisional 99.27
PRK14298377 chaperone protein DnaJ; Provisional 99.25
PRK14285365 chaperone protein DnaJ; Provisional 99.24
PRK10767371 chaperone protein DnaJ; Provisional 99.2
PRK14279392 chaperone protein DnaJ; Provisional 99.19
PRK14301373 chaperone protein DnaJ; Provisional 99.19
PRK14284391 chaperone protein DnaJ; Provisional 99.18
PRK14277386 chaperone protein DnaJ; Provisional 99.17
KOG0720490 consensus Molecular chaperone (DnaJ superfamily) [ 99.16
PRK14300372 chaperone protein DnaJ; Provisional 99.16
PRK14289386 chaperone protein DnaJ; Provisional 99.15
TIGR02349354 DnaJ_bact chaperone protein DnaJ. This model repre 99.13
PRK14287371 chaperone protein DnaJ; Provisional 99.13
COG5407610 SEC63 Preprotein translocase subunit Sec63 [Intrac 99.13
PRK14293374 chaperone protein DnaJ; Provisional 99.1
PRK14278378 chaperone protein DnaJ; Provisional 99.1
PRK14288369 chaperone protein DnaJ; Provisional 99.08
PRK14280376 chaperone protein DnaJ; Provisional 99.08
PRK14276380 chaperone protein DnaJ; Provisional 99.05
PRK14286372 chaperone protein DnaJ; Provisional 99.04
PRK14281397 chaperone protein DnaJ; Provisional 99.03
TIGR00714157 hscB Fe-S protein assembly co-chaperone HscB. This 99.02
PRK14297380 chaperone protein DnaJ; Provisional 99.01
PRK14296372 chaperone protein DnaJ; Provisional 99.01
PRK14292371 chaperone protein DnaJ; Provisional 98.96
PRK14291382 chaperone protein DnaJ; Provisional 98.93
PTZ00037421 DnaJ_C chaperone protein; Provisional 98.91
PLN03165111 chaperone protein dnaJ-related; Provisional 98.91
PRK14283378 chaperone protein DnaJ; Provisional 98.9
PRK14299291 chaperone protein DnaJ; Provisional 98.85
PRK10266306 curved DNA-binding protein CbpA; Provisional 98.67
PRK01773173 hscB co-chaperone HscB; Provisional 98.66
KOG1789 2235 consensus Endocytosis protein RME-8, contains DnaJ 98.49
COG5269379 ZUO1 Ribosome-associated chaperone zuotin [Transla 98.47
PF0155681 CTDII: DnaJ C terminal domain; InterPro: IPR002939 98.46
TIGR02642186 phage_xxxx uncharacterized phage protein. This unc 98.43
KOG1150250 consensus Predicted molecular chaperone (DnaJ supe 98.38
PRK09430267 djlA Dna-J like membrane chaperone protein; Provis 98.35
KOG0723112 consensus Molecular chaperone (DnaJ superfamily) [ 98.25
KOG0568342 consensus Molecular chaperone (DnaJ superfamily) [ 98.03
KOG0712337 consensus Molecular chaperone (DnaJ superfamily) [ 97.87
COG1107 715 Archaea-specific RecJ-like exonuclease, contains D 97.81
TIGR03835 871 termin_org_DnaJ terminal organelle assembly protei 97.45
PF0068466 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0 97.41
COG1107 715 Archaea-specific RecJ-like exonuclease, contains D 97.37
KOG2813406 consensus Predicted molecular chaperone, contains 97.14
PLN03165111 chaperone protein dnaJ-related; Provisional 96.46
KOG2813406 consensus Predicted molecular chaperone, contains 96.25
TIGR02642186 phage_xxxx uncharacterized phage protein. This unc 95.38
PF03656127 Pam16: Pam16; InterPro: IPR005341 The Pam16 protei 95.15
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 94.45
KOG3192168 consensus Mitochondrial J-type chaperone [Posttran 93.26
KOG0724335 consensus Zuotin and related molecular chaperones 91.64
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 90.62
PF11833194 DUF3353: Protein of unknown function (DUF3353); In 90.43
KOG0715288 consensus Molecular chaperone (DnaJ superfamily) [ 90.05
cd03031147 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d 88.75
KOG0431453 consensus Auxilin-like protein and related protein 88.37
KOG2824281 consensus Glutaredoxin-related protein [Posttransl 88.28
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-100  Score=772.79  Aligned_cols=386  Identities=47%  Similarity=0.896  Sum_probs=348.0

Q ss_pred             ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhCCccccccccccCccccccCCCCCCCCCCCcccc
Q 015732            2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDPFDIF   81 (401)
Q Consensus         2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~g~~~g~~~~~~~d~F   81 (401)
                      +||||+++||.+|||+|||+||++||||+|+++++|++|++||||||||+||+.||+||+.++.++.    ++.++.|+|
T Consensus        32 ~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~----~~~d~~d~f  107 (421)
T PTZ00037         32 EVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE----QPADASDLF  107 (421)
T ss_pred             HHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC----CCcchhhhH
Confidence            6899999999999999999999999999999889999999999999999999999999998776321    224567899


Q ss_pred             ccccCCCCCCCCCCCcccccCcceEEeEeeeeeeeecCceeeeeeeeeeecCcccCCCCccCCeeeccCCcccceEEEEE
Q 015732           82 QSFFGGSPFGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIR  161 (401)
Q Consensus        82 ~~fFgg~~f~g~~~~~~~~~g~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~  161 (401)
                      +.|||++     +++.++++|.|+.+.|.|||+|+|+|+++++.+++.+.|+.|+|+|.......+|+.|+|+|+++..+
T Consensus       108 ~~~Fggg-----~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~  182 (421)
T PTZ00037        108 DLIFGGG-----RKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIR  182 (421)
T ss_pred             HHhhccc-----cccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCCCeEEEEE
Confidence            9999752     11123467999999999999999999999999999999999999998877778999999999999999


Q ss_pred             ecCCcceeEeEeeCCCCCCcceEEcCCCCCCCcCCccEEEEeEEEEEEEcCCCcCCCEEeccCCcCCCCCCCcccEEEEE
Q 015732          162 HLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVL  241 (401)
Q Consensus       162 ~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDliv~i  241 (401)
                      ++|| |+++++++|+.|+|+|+++..+++|+.|+|.|++.+.++++|+||+|+.+|++|+|+|+|++.+++.||||||+|
T Consensus       183 ~~g~-~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I  261 (421)
T PTZ00037        183 QMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFIL  261 (421)
T ss_pred             eecc-eeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEE
Confidence            9999 899999999999999999988899999999999999999999999999999999999999998899999999999


Q ss_pred             EEeeCCcceecCcceeeeccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEE
Q 015732          242 QQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIH  321 (401)
Q Consensus       242 ~~~~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~  321 (401)
                      .+++|+.|+|+|+|||+++.|||+|||+|+++.|+||||+.|.|++|||+|++||++++|+|+|||..++++.+|||||+
T Consensus       262 ~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~  341 (421)
T PTZ00037        262 NEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVT  341 (421)
T ss_pred             EecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEE
Confidence            99999999999999999999999999999999999999998999999999999999999999999987655678999999


Q ss_pred             EEEeCC--CCCCHHHHHHHHhhCCCCCCCCCccCcccccceeeeccCChhHHHHHHhhhcccccccCCCC--CCCCCCCC
Q 015732          322 FTVDFP--ESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRKQQAAQEAYDEDDDM--QGGAQRVQ  397 (401)
Q Consensus       322 ~~V~~P--~~l~~~~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  397 (401)
                      |+|.||  +.||++|+++|++|||.++.... +++..++|+++++++++++...+   .++++|+||+|+  ++++++||
T Consensus       342 ~~V~~P~~~~Ls~~qk~ll~~l~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~  417 (421)
T PTZ00037        342 FEVIFPVDRKFTNEEKEILKSLFPQNPEEKK-DLEDTEIEVVTAQNVDPEEVKDR---DQKQQYQEDEDDEHHQEGERVA  417 (421)
T ss_pred             EEEEcCCCCCCCHHHHHHHHHhccCCCCCCC-CCCcccceeEecccCCHHHhhhh---HHHHhhccccccccCCCCCccc
Confidence            999999  88999999999999997654443 56678899999999999876544   235566555443  34678999


Q ss_pred             CcCC
Q 015732          398 CAQQ  401 (401)
Q Consensus       398 c~~q  401 (401)
                      ||||
T Consensus       418 c~~q  421 (421)
T PTZ00037        418 CRQQ  421 (421)
T ss_pred             cCCC
Confidence            9998

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress Back     alignment and domain information
>PHA03102 Small T antigen; Reviewed Back     alignment and domain information
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] Back     alignment and domain information
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation Back     alignment and domain information
>smart00271 DnaJ DnaJ molecular chaperone homology domain Back     alignment and domain information
>cd06257 DnaJ DnaJ domain or J-domain Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00100 DnaJ chaperone protein; Provisional Back     alignment and domain information
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>PRK01356 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK05014 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK00294 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK03578 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PLN03165 chaperone protein dnaJ-related; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>PRK01773 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress Back     alignment and domain information
>TIGR02642 phage_xxxx uncharacterized phage protein Back     alignment and domain information
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation Back     alignment and domain information
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN03165 chaperone protein dnaJ-related; Provisional Back     alignment and domain information
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02642 phage_xxxx uncharacterized phage protein Back     alignment and domain information
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) [] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs Back     alignment and domain information
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only] Back     alignment and domain information
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
1nlt_A248 The Crystal Structure Of Hsp40 Ydj1 Length = 248 2e-45
3agz_A190 Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi 9e-25
2qld_A183 Human Hsp40 Hdj1 Length = 183 1e-24
3agx_A181 Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi 2e-24
2q2g_A180 Crystal Structure Of Dimerization Domain Of Hsp40 F 5e-23
1c3g_A170 S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1 4e-19
2b26_A173 The Crystal Structure Of The Protein Complex Of Yea 4e-19
2o37_A92 J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S 2e-14
1hdj_A77 Human Hsp40 (Hdj-1), Nmr Length = 77 6e-14
1xao_A121 Hsp40-Ydj1 Dimerization Domain Length = 121 9e-13
2lo1_A71 Nmr Structure Of The Protein Bc008182, A Dnaj-Like 1e-12
2lgw_A99 Solution Structure Of The J Domain Of Hsj1a Length 1e-12
2och_A73 J-domain Of Dnj-12 From Caenorhabditis Elegans Leng 1e-11
2ctw_A109 Solution Structure Of J-Domain From Mouse Dnaj Subf 4e-11
2ctp_A78 Solution Structure Of J-Domain From Human Dnaj Subf 5e-11
2ej7_A82 Solution Structure Of The Dnaj Domain Of The Human 1e-09
1bqz_A77 J-Domain (Residues 1-77) Of The Escherichia Coli N- 2e-09
1bq0_A103 J-Domain (Residues 1-77) Of The Escherichia Coli N- 2e-09
1xbl_A107 Nmr Structure Of The J-Domain (Residues 2-76) In Th 2e-09
2dmx_A92 Solution Structure Of The J Domain Of Dnaj Homolog 2e-09
2cug_A88 Solution Structure Of The J Domain Of The Pseudo Dn 2e-09
2ctr_A88 Solution Structure Of J-Domain From Human Dnaj Subf 2e-08
2dn9_A79 Solution Structure Of J-Domain From The Dnaj Homolo 2e-08
3apo_A 780 Crystal Structure Of Full-Length Erdj5 Length = 780 4e-06
3apq_A210 Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt 7e-06
2kqx_A73 Nmr Structure Of The J-Domain (Residues 2-72) In Th 2e-05
3lz8_A329 Structure Of A Putative Chaperone Dnaj From Klebsie 3e-05
2y4t_A450 Crystal Structure Of The Human Co-Chaperone P58(Ipk 8e-04
2y4u_A450 Crystal Structure Of Human P58(Ipk) In Space Group 9e-04
>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248 Back     alignment and structure 
Iteration: 1

 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 133/227 (58%), Gaps = 2/227 (0%)
Query: 103 EDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRH 162
           +D+ H +  SLE+LY G + KL+L++ ++                     G G+K   R 
Sbjct: 12  KDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQ 71
Query: 163 LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITF 222
           +GP MIQ+ Q  C+ C GTG+ I+ KDRC  C G+KV  E+K+LEV VE GM++GQ+I F
Sbjct: 72  MGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVF 130
Query: 223 PGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQ 282
            GEAD+APD + GD+VF++ ++ H  FKR GDDL  E  + L  A+ G +F + H+ G  
Sbjct: 131 KGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDW 190
Query: 283 LLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES 329
           L +   PGEV+ P   K I  +GMP+ +     G L I FT+  PE+
Sbjct: 191 LKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGY-GNLIIKFTIKDPEN 236
>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Complexed With A C-Terminal Peptide Of Hsp70 Length = 190 Back     alignment and structure
>pdb|2QLD|A Chain A, Human Hsp40 Hdj1 Length = 183 Back     alignment and structure
>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Length = 181 Back     alignment and structure
>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From Cryptosporidium Parvum, Cgd2_1800 Length = 180 Back     alignment and structure
>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170 Back     alignment and structure
>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173 Back     alignment and structure
>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92 Back     alignment and structure
>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77 Back     alignment and structure
>pdb|1XAO|A Chain A, Hsp40-Ydj1 Dimerization Domain Length = 121 Back     alignment and structure
>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71 Back     alignment and structure
>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99 Back     alignment and structure
>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73 Back     alignment and structure
>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109 Back     alignment and structure
>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78 Back     alignment and structure
>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82 Back     alignment and structure
>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77 Back     alignment and structure
>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103 Back     alignment and structure
>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107 Back     alignment and structure
>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92 Back     alignment and structure
>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88 Back     alignment and structure
>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88 Back     alignment and structure
>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79 Back     alignment and structure
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780 Back     alignment and structure
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210 Back     alignment and structure
>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73 Back     alignment and structure
>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329 Back     alignment and structure
>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450 Back     alignment and structure
>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
1nlt_A248 Protein YDJ1, mitochondrial protein import protein 1e-129
3agx_A181 DNAJ homolog subfamily B member 1; chaperone; 1.85 1e-86
3agx_A181 DNAJ homolog subfamily B member 1; chaperone; 1.85 3e-06
2q2g_A180 HSP40 protein, heat shock 40 kDa protein, putative 1e-78
1c3g_A170 Heat shock protein 40; beta sheets, short helices, 1e-72
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 4e-58
1xao_A121 YDJ1, mitochondrial protein import protein MAS5; b 2e-50
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 2e-34
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 5e-34
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 9e-33
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 5e-32
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 9e-32
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 9e-31
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 2e-29
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 3e-29
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 5e-29
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 6e-29
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 2e-28
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 8e-28
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 3e-27
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 3e-27
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 4e-27
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 7e-27
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 1e-26
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 6e-25
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 2e-23
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 2e-23
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 3e-20
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 6e-20
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 1e-19
2ctt_A104 DNAJ homolog subfamily A member 3; ZING finger, be 1e-18
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 6e-18
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 2e-17
1exk_A79 DNAJ protein; extended beta-hairpin, CXXCXGXG, zin 2e-13
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 3e-13
2guz_A71 Mitochondrial import inner membrane translocase su 4e-13
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 1e-11
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 2e-09
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 3e-09
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 2e-07
3i38_A109 Putative chaperone DNAJ; structural genomics, prot 5e-07
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 4e-06
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248 Back     alignment and structure
 Score =  370 bits (953), Expect = e-129
 Identities = 110/250 (44%), Positives = 158/250 (63%), Gaps = 4/250 (1%)

Query: 92  GSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGC 151
           G+ R R  +RG+D+ H +  SLE+LY G + KL+L++ ++C +C+G+G K GA  KC+ C
Sbjct: 1   GAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSC 60

Query: 152 QGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVE 211
            G G+K   R +GP MIQ+ Q  C+ C GTG+ I+ KDRC  C G+KV  E+K+LEV VE
Sbjct: 61  NGQGIKFVTRQMGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVE 119

Query: 212 KGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF 271
            GM++GQ+I F GEAD+APD + GD+VF++ ++ H  FKR GDDL  E  + L  A+ G 
Sbjct: 120 PGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGG 179

Query: 272 QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLS 331
           +F + H+ G  L +   PGEV+ P   K I  +GMP+ +     G L I FT+  PE+  
Sbjct: 180 EFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHF 238

Query: 332 --PDQCKMLE 339
              +  K LE
Sbjct: 239 TSEENLKKLE 248
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181 Back     alignment and structure
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181 Back     alignment and structure
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180 Back     alignment and structure
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170 Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329 Back     alignment and structure
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210 Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92 Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109 Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103 Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92 Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77 Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73 Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88 Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112 Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174 Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155 Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82 Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99 Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88 Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79 Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94 Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109 Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780 Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88 Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90 Back     alignment and structure
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104 Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79 Back     alignment and structure
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79 Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181 Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71 Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182 Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171 Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92 Back     alignment and structure
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109 Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207 Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query401
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 100.0
1nlt_A248 Protein YDJ1, mitochondrial protein import protein 100.0
3agx_A181 DNAJ homolog subfamily B member 1; chaperone; 1.85 100.0
2q2g_A180 HSP40 protein, heat shock 40 kDa protein, putative 100.0
1c3g_A170 Heat shock protein 40; beta sheets, short helices, 100.0
1xao_A121 YDJ1, mitochondrial protein import protein MAS5; b 99.96
3i38_A109 Putative chaperone DNAJ; structural genomics, prot 99.93
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 99.87
2ctt_A104 DNAJ homolog subfamily A member 3; ZING finger, be 99.84
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 99.84
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 99.83
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 99.82
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 99.82
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 99.82
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 99.81
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 99.81
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 99.81
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 99.8
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 99.8
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 99.79
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 99.79
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 99.79
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 99.77
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 99.76
3apq_A210 DNAJ homolog subfamily C member 10; thioredoxin fo 99.75
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 99.75
2pf4_E174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 99.75
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 99.73
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 99.71
2guz_A71 Mitochondrial import inner membrane translocase su 99.69
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 99.69
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 99.68
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 99.63
1fpo_A171 HSC20, chaperone protein HSCB; molecular chaperone 99.61
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 99.6
3hho_A174 CO-chaperone protein HSCB homolog; structural geno 99.59
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 99.58
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 99.57
3uo3_A181 J-type CO-chaperone JAC1, mitochondrial; structura 99.55
1exk_A79 DNAJ protein; extended beta-hairpin, CXXCXGXG, zin 99.5
1nlt_A248 Protein YDJ1, mitochondrial protein import protein 99.06
2guz_B65 Mitochondrial import inner membrane translocase su 98.99
3i38_A109 Putative chaperone DNAJ; structural genomics, prot 98.85
1xao_A121 YDJ1, mitochondrial protein import protein MAS5; b 98.72
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 98.57
1c3g_A170 Heat shock protein 40; beta sheets, short helices, 98.55
2q2g_A180 HSP40 protein, heat shock 40 kDa protein, putative 98.55
3lz8_A329 Putative chaperone DNAJ; structure genomics, struc 98.48
3agx_A181 DNAJ homolog subfamily B member 1; chaperone; 1.85 98.43
3lcz_A53 YCZA, inhibitor of trap, regulated by T-box (Trp) 97.86
1exk_A79 DNAJ protein; extended beta-hairpin, CXXCXGXG, zin 97.61
3pmq_A 669 Decaheme cytochrome C MTRF; greek KEY, C type cyto 97.56
2ctt_A104 DNAJ homolog subfamily A member 3; ZING finger, be 97.47
2bx9_A53 Anti-trap, AT, tryptophan RNA-binding attenuator p 96.87
2bx9_A53 Anti-trap, AT, tryptophan RNA-binding attenuator p 96.64
3lcz_A53 YCZA, inhibitor of trap, regulated by T-box (Trp) 96.53
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 95.44
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
Probab=100.00  E-value=4.1e-66  Score=506.97  Aligned_cols=273  Identities=27%  Similarity=0.405  Sum_probs=158.8

Q ss_pred             ceeCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHHHhCCccccccccccCccccccCCC-------CC
Q 015732            2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMG-------GG   71 (401)
Q Consensus         2 ~iLgv~~~As~~eIKkAYrkla~k~HPDkn~~---~~kFk~I~~AYevLsd~~kR~~YD~~g~~~~~~g~~-------~g   71 (401)
                      +||||+++||.+|||+|||+||++||||+|++   +++|++|++||+||+||.+|+.||+|+..+...+++       ++
T Consensus        32 ~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~~~~~~~  111 (329)
T 3lz8_A           32 AILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQRQTHEQS  111 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcccccccccCC
Confidence            69999999999999999999999999999975   489999999999999999999999995432211110       11


Q ss_pred             CCCCCCccccccccCCCCCCCCCCCcccccCcceEEeEeeeeeeeecCceeeeeeeeeeecCcccCCCCccCCeeeccCC
Q 015732           72 GGAHDPFDIFQSFFGGSPFGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGC  151 (401)
Q Consensus        72 ~~~~~~~d~F~~fFgg~~f~g~~~~~~~~~g~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C  151 (401)
                      .++.++.|||++|||+++++  ++.+.+++|.|+.++|.|||+|+|+|+++++.+++.+.|                   
T Consensus       112 f~~~~f~diF~~~Fg~~g~~--~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~-------------------  170 (329)
T 3lz8_A          112 YSQQDFDDIFSSMFGQQAHQ--RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN-------------------  170 (329)
T ss_dssp             ---------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC-------------------
T ss_pred             cCCCchhhhhHhhhcCcCCC--CCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec-------------------
Confidence            11235678999999753221  112335689999999999999999999999999876632                   


Q ss_pred             cccceEEEEEecCCcceeEeEeeCCCCCCcceEEcCCCCCCCcCCccEEEEeEEEEEEEcCCCcCCCEEeccCCcCCCC-
Q 015732          152 QGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAP-  230 (401)
Q Consensus       152 ~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-  230 (401)
                       |.|.                           +              ++...+.++|+||||+++|++|+|+|+|++.+ 
T Consensus       171 -g~G~---------------------------v--------------~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~  208 (329)
T 3lz8_A          171 -VFGM---------------------------I--------------ESETPKTLNVKIPAGVVDGQRIRLKGQGTPGEN  208 (329)
T ss_dssp             -SCC----------------------------C--------------CEEEEEEEEEEECTTCCTTCEEEESSCSCCC--
T ss_pred             -CCeE---------------------------E--------------EEecceEEEEeCCCCCCCCCEEEEcccccCCCC
Confidence             1111                           0              22335689999999999999999999999964 


Q ss_pred             CCCcccEEEEEEEeeCCcceecCcceeeeccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCC
Q 015732          231 DTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQ  310 (401)
Q Consensus       231 g~~~GDliv~i~~~~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~  310 (401)
                      ++.+|||||+|++++|+.|+|+|+||+++++|+|+|||||+++.|+||||+ +.|+||+|  ++||++++|+|+|||.. 
T Consensus       209 gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~g--t~~g~~~rl~G~GmP~~-  284 (329)
T 3lz8_A          209 GGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK-  284 (329)
T ss_dssp             -CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS-
T ss_pred             CCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCC--CCCCCEEEEcCCCCCCC-
Confidence            678999999999999999999999999999999999999999999999998 68999999  79999999999999975 


Q ss_pred             CCCCCCCEEEEEEEeCCCCCCHHHHHHHHhhCC
Q 015732          311 RPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP  343 (401)
Q Consensus       311 ~~~~~GdL~v~~~V~~P~~l~~~~~~~l~~~lp  343 (401)
                        ..+|||||+|+|+||++|+++|+++|+++..
T Consensus       285 --~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~  315 (329)
T 3lz8_A          285 --THTGDLFAVIKIVMPTKPDEKARELWQQLAA  315 (329)
T ss_dssp             --SCBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred             --CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence              3699999999999999999999999999875
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Back     alignment and structure
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Back     alignment and structure
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Back     alignment and structure
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Back     alignment and structure
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Back     alignment and structure
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Back     alignment and structure
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Back     alignment and structure
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Back     alignment and structure
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Back     alignment and structure
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Back     alignment and structure
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Back     alignment and structure
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Back     alignment and structure
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Back     alignment and structure
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A Back     alignment and structure
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Back     alignment and structure
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis} Back     alignment and structure
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C* Back     alignment and structure
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C* Back     alignment and structure
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 401
d1c3ga290 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba 3e-24
d1nlta374 g.54.1.1 (A:139-212) Mitochondrial protein import 2e-23
d1nlta280 b.4.1.1 (A:258-337) Mitochondrial protein import p 3e-21
d1xbla_75 a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain 3e-15
d1hdja_77 a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9 1e-13
d1nz6a_98 a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T 3e-13
d1exka_79 g.54.1.1 (A:) Cysteine-rich domain of the chaperon 4e-13
d1fafa_79 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 6e-13
d1gh6a_114 a.2.3.1 (A:) Large T antigen, the N-terminal J dom 2e-11
d1c3ga180 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba 5e-11
d1c3ga180 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba 0.002
d1wjza_94 a.2.3.1 (A:) CSL-type zinc finger-containing prote 6e-11
d1fpoa176 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma 2e-10
d1iura_88 a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human 9e-10
d1nlta174 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei 5e-09
d1m1qa_90 a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum 2e-06
>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90 Back     information, alignment and structure

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 93.5 bits (232), Expect = 3e-24
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 249 FKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPM 308
           FKR GDDL     LS  E+L GF   I  +DGR L +       V+P Q      +GMP 
Sbjct: 2   FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQ--PVQPSQTSTYPGQGMPT 59

Query: 309 YQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 339
            + P  RG L + + VD+P SL+  Q + ++
Sbjct: 60  PKNPSQRGNLIVKYKVDYPISLNDAQKRAID 90
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74 Back     information, alignment and structure
>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80 Back     information, alignment and structure
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75 Back     information, alignment and structure
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77 Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 Back     information, alignment and structure
>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Length = 79 Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79 Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114 Back     information, alignment and structure
>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80 Back     information, alignment and structure
>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80 Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94 Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76 Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88 Back     information, alignment and structure
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74 Back     information, alignment and structure
>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query401
d1c3ga290 Heat shock protein 40 Sis1 {Baker's yeast (Sacchar 99.93
d1nlta280 Mitochondrial protein import protein mas5 (Hsp40, 99.88
d1xbla_75 DnaJ chaperone, N-terminal (J) domain {Escherichia 99.87
d1hdja_77 HSP40 {Human (Homo sapiens) [TaxId: 9606]} 99.84
d1gh6a_114 Large T antigen, the N-terminal J domain {Simian v 99.84
d1wjza_94 CSL-type zinc finger-containing protein 3 (J-domai 99.77
d1fafa_79 Large T antigen, the N-terminal J domain {Murine p 99.76
d1nlta374 Mitochondrial protein import protein mas5 (Hsp40, 99.71
d1nlta174 Mitochondrial protein import protein mas5 (Hsp40, 99.67
d1c3ga180 Heat shock protein 40 Sis1 {Baker's yeast (Sacchar 99.66
d1iura_88 Hypothetical protein KIAA0730 {Human (Homo sapiens 99.64
d1nz6a_98 Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} 99.62
d1fpoa176 HSC20 (HSCB), N-terminal (J) domain {Escherichia c 99.62
d1exka_79 Cysteine-rich domain of the chaperone protein DnaJ 99.58
d1nlta174 Mitochondrial protein import protein mas5 (Hsp40, 99.28
d1c3ga180 Heat shock protein 40 Sis1 {Baker's yeast (Sacchar 98.72
d1c3ga290 Heat shock protein 40 Sis1 {Baker's yeast (Sacchar 98.69
d1nlta280 Mitochondrial protein import protein mas5 (Hsp40, 98.47
d1exka_79 Cysteine-rich domain of the chaperone protein DnaJ 97.69
d1nlta374 Mitochondrial protein import protein mas5 (Hsp40, 97.12
d1m1qa_90 Flavocytochrome c3 (respiratory fumarate reductase 96.8
d1m1qa_90 Flavocytochrome c3 (respiratory fumarate reductase 86.51
>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.3e-26  Score=183.56  Aligned_cols=90  Identities=38%  Similarity=0.647  Sum_probs=85.7

Q ss_pred             cceecCcceeeeccCCHHHHhCCcEEEEEecCCcEEEEEeCCCccccCCcEEEecCCCCcCCCCCCCCCCEEEEEEEeCC
Q 015732          248 KFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP  327 (401)
Q Consensus       248 ~f~R~g~dL~~~~~I~l~eAl~G~~~~i~~ldG~~l~i~ip~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P  327 (401)
                      .|+|+|+||+++++|||+|||+|+++.|+|+||+.+.|++|++  +++|+.++|+|+|||.+++++.+|||||+|+|+||
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~--~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P   78 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYP   78 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCC
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccc--cccccccccCCCCCCcCCCCCCcCCEEEEEEEEcC
Confidence            4999999999999999999999999999999999999999988  89999999999999998777789999999999999


Q ss_pred             CCCCHHHHHHHH
Q 015732          328 ESLSPDQCKMLE  339 (401)
Q Consensus       328 ~~l~~~~~~~l~  339 (401)
                      ++||++|+++|+
T Consensus        79 ~~ls~~qk~~lE   90 (90)
T d1c3ga2          79 ISLNDAQKRAID   90 (90)
T ss_dssp             SSCCTTHHHHTC
T ss_pred             CCCCHHHHHhhC
Confidence            999999998874
>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Back     information, alignment and structure
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Back     information, alignment and structure
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Back     information, alignment and structure
>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Back     information, alignment and structure